View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8104_low_13 (Length: 243)

Name: NF8104_low_13
Description: NF8104
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8104_low_13
NF8104_low_13
[»] chr2 (15 HSPs)
chr2 (21-217)||(44716864-44717060)
chr2 (21-215)||(36750319-36750513)
chr2 (21-215)||(13149747-13149939)
chr2 (21-215)||(30965232-30965426)
chr2 (21-215)||(31002281-31002475)
chr2 (21-215)||(31008259-31008453)
chr2 (21-215)||(13456004-13456198)
chr2 (21-215)||(13461945-13462139)
chr2 (21-215)||(28683006-28683200)
chr2 (21-215)||(35090710-35090907)
chr2 (21-215)||(35084737-35084934)
chr2 (97-215)||(11048614-11048732)
chr2 (136-215)||(23343580-23343659)
chr2 (21-215)||(35438770-35438960)
chr2 (164-215)||(29833255-29833306)
[»] chr8 (17 HSPs)
chr8 (21-215)||(10699934-10700127)
chr8 (21-215)||(36818876-36819069)
chr8 (21-203)||(10705742-10705923)
chr8 (21-215)||(42993065-42993258)
chr8 (21-215)||(5542221-5542415)
chr8 (21-215)||(32890793-32890987)
chr8 (21-215)||(14417845-14418039)
chr8 (21-215)||(32896917-32897111)
chr8 (21-215)||(9935183-9935377)
chr8 (86-215)||(7771202-7771330)
chr8 (21-217)||(22219776-22219982)
chr8 (127-215)||(14799477-14799564)
chr8 (29-215)||(39735613-39735795)
chr8 (92-215)||(1882813-1882939)
chr8 (21-186)||(1171250-1171414)
chr8 (21-215)||(39727381-39727563)
chr8 (21-56)||(42033705-42033740)
[»] chr6 (19 HSPs)
chr6 (21-211)||(25354116-25354305)
chr6 (21-215)||(4580382-4580576)
chr6 (21-215)||(8650864-8651058)
chr6 (21-215)||(25343529-25343722)
chr6 (21-215)||(21190927-21191121)
chr6 (74-215)||(32035347-32035488)
chr6 (88-215)||(21782814-21782941)
chr6 (25-215)||(31756276-31756471)
chr6 (136-215)||(8662842-8662921)
chr6 (97-215)||(21770619-21770735)
chr6 (97-215)||(21783370-21783486)
chr6 (97-215)||(21789593-21789709)
chr6 (97-215)||(21197082-21197198)
chr6 (97-215)||(17581615-17581724)
chr6 (98-215)||(18778564-18778681)
chr6 (157-211)||(34603395-34603449)
chr6 (157-211)||(34724672-34724726)
chr6 (136-190)||(6098000-6098053)
chr6 (21-56)||(21197250-21197285)
[»] chr4 (23 HSPs)
chr4 (21-215)||(33461454-33461647)
chr4 (23-215)||(33458328-33458520)
chr4 (21-215)||(6257266-6257460)
chr4 (21-215)||(24287891-24288085)
chr4 (23-215)||(10739400-10739592)
chr4 (23-215)||(10953169-10953361)
chr4 (23-215)||(10733307-10733499)
chr4 (23-215)||(10947076-10947268)
chr4 (24-215)||(48160867-48161057)
chr4 (24-215)||(48167086-48167276)
chr4 (23-116)||(10733512-10733605)
chr4 (23-116)||(10947281-10947374)
chr4 (21-211)||(44831677-44831874)
chr4 (25-215)||(49976493-49976685)
chr4 (21-208)||(4632286-4632482)
chr4 (97-215)||(26963402-26963518)
chr4 (136-215)||(3769587-3769665)
chr4 (148-215)||(50168624-50168691)
chr4 (157-213)||(9237403-9237459)
chr4 (23-88)||(35177703-35177770)
chr4 (159-215)||(28704553-28704609)
chr4 (131-206)||(50155972-50156046)
chr4 (136-215)||(50427387-50427473)
[»] chr1 (15 HSPs)
chr1 (21-215)||(25381596-25381790)
chr1 (21-215)||(25387565-25387759)
chr1 (21-215)||(31057949-31058142)
chr1 (21-215)||(8092907-8093101)
chr1 (21-215)||(31051449-31051642)
chr1 (21-215)||(34739890-34740084)
chr1 (21-215)||(50306094-50306287)
chr1 (21-215)||(1078149-1078322)
chr1 (97-215)||(44409992-44410108)
chr1 (66-215)||(24926815-24926962)
chr1 (136-197)||(38152048-38152109)
chr1 (66-215)||(24963763-24963910)
chr1 (121-215)||(12183645-12183738)
chr1 (172-215)||(27955216-27955259)
chr1 (24-56)||(44409908-44409940)
[»] chr7 (21 HSPs)
chr7 (21-215)||(20238855-20239049)
chr7 (21-215)||(28421020-28421214)
chr7 (21-215)||(351691-351884)
chr7 (24-215)||(3817372-3817563)
chr7 (21-210)||(5979240-5979429)
chr7 (24-215)||(3811230-3811421)
chr7 (21-215)||(339284-339469)
chr7 (70-215)||(42767356-42767501)
chr7 (25-155)||(15843855-15843985)
chr7 (25-155)||(15860964-15861094)
chr7 (24-215)||(43539887-43540083)
chr7 (21-215)||(35148065-35148264)
chr7 (94-215)||(26383603-26383724)
chr7 (92-215)||(12803973-12804098)
chr7 (21-215)||(5849434-5849623)
chr7 (84-215)||(30219307-30219438)
chr7 (66-213)||(22741988-22742130)
chr7 (62-147)||(7608390-7608475)
chr7 (157-215)||(18666557-18666614)
chr7 (23-56)||(24690848-24690881)
chr7 (21-79)||(35150736-35150796)
[»] chr3 (27 HSPs)
chr3 (21-215)||(11839786-11839980)
chr3 (21-215)||(38455611-38455805)
chr3 (22-215)||(11846124-11846318)
chr3 (21-215)||(17055854-17056048)
chr3 (21-215)||(38449124-38449318)
chr3 (24-215)||(10760711-10760902)
chr3 (21-215)||(49151516-49151710)
chr3 (21-215)||(49157583-49157777)
chr3 (21-215)||(8331691-8331885)
chr3 (21-215)||(10238273-10238467)
chr3 (21-215)||(10244395-10244589)
chr3 (21-215)||(30051163-30051357)
chr3 (21-215)||(42191281-42191475)
chr3 (21-215)||(42197223-42197417)
chr3 (38-215)||(55003473-55003650)
chr3 (77-215)||(17593343-17593481)
chr3 (21-115)||(10769130-10769224)
chr3 (121-215)||(10766932-10767026)
chr3 (23-200)||(13444964-13445144)
chr3 (136-215)||(34300516-34300595)
chr3 (21-215)||(53069115-53069314)
chr3 (143-215)||(48128108-48128180)
chr3 (21-75)||(13837578-13837632)
chr3 (159-215)||(28964910-28964966)
chr3 (148-215)||(12108729-12108796)
chr3 (94-215)||(46656661-46656782)
chr3 (21-54)||(26429639-26429672)
[»] chr5 (24 HSPs)
chr5 (21-215)||(12686240-12686434)
chr5 (21-215)||(12692342-12692536)
chr5 (21-215)||(7389609-7389802)
chr5 (21-215)||(28525447-28525641)
chr5 (24-215)||(28531543-28531734)
chr5 (21-215)||(41297187-41297375)
chr5 (21-215)||(30772186-30772381)
chr5 (21-133)||(32097165-32097277)
chr5 (95-215)||(32094221-32094340)
chr5 (21-210)||(20500043-20500231)
chr5 (21-133)||(32094364-32094476)
chr5 (121-215)||(24054338-24054433)
chr5 (98-215)||(32097022-32097138)
chr5 (21-215)||(30384439-30384641)
chr5 (92-215)||(19059825-19059950)
chr5 (136-215)||(19066168-19066247)
chr5 (148-215)||(28542269-28542336)
chr5 (141-215)||(16215235-16215309)
chr5 (21-89)||(14610073-14610141)
chr5 (152-211)||(14610184-14610243)
chr5 (157-209)||(37896365-37896417)
chr5 (121-215)||(26509856-26509948)
chr5 (21-56)||(19066332-19066367)
chr5 (146-215)||(26316853-26316922)
[»] scaffold0363 (1 HSPs)
scaffold0363 (21-215)||(680-874)
[»] scaffold0208 (2 HSPs)
scaffold0208 (21-215)||(12300-12494)
scaffold0208 (21-215)||(6427-6621)
[»] scaffold0440 (1 HSPs)
scaffold0440 (21-215)||(1255-1449)
[»] scaffold0236 (1 HSPs)
scaffold0236 (47-215)||(5465-5633)
[»] scaffold0012 (1 HSPs)
scaffold0012 (24-215)||(172951-173142)
[»] scaffold1114 (1 HSPs)
scaffold1114 (23-203)||(990-1174)
[»] scaffold0185 (1 HSPs)
scaffold0185 (138-215)||(5945-6021)
[»] scaffold0085 (1 HSPs)
scaffold0085 (121-215)||(38434-38526)


Alignment Details
Target: chr2 (Bit Score: 165; Significance: 2e-88; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 21 - 217
Target Start/End: Complemental strand, 44717060 - 44716864
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  44717060 accggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcgttgttgatgagagagctgctaca 44716961  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgttttct 217  Q
    |||||||||||||  |||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  44716960 aaagctttatccaggtattcctaataccctaattcttaatatccttggtaaatcaaacatgtcgtagatccgatcataatcatgttcaatgttttct 44716864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 21 - 215
Target Start/End: Original strand, 36750319 - 36750513
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||      
T  36750319 accggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcgttgttgattagagggctgctatg 36750418  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||| ||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36750419 aaagttttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 36750513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 13149939 - 13149747
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13149939 accggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcgttgttgatgagagggctgctaca 13149840  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||| ||||| ||  ||||| |||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13149839 aaagttttat-caggtattcttaataccctaattcttaatat-cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 13149747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 21 - 215
Target Start/End: Original strand, 30965232 - 30965426
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30965232 accggttgaggaagaaccaaattagtcgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 30965331  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||| ||||| ||  |||||||||||||||||||| ||| ||  |||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  30965332 aaagatttatacaggtattcctaataccctaattcttaaaataattgataaatcaaacatgtcgtagatccgatcataatcatgttcaatatttt 30965426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 21 - 215
Target Start/End: Original strand, 31002281 - 31002475
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  31002281 accggttgaggaagaaccaaattagtcgccgctaactctattgtgtgtttcagatcatctcctctttttggttatcgttgttgatgagagggctgctaca 31002380  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||| ||  |||||||||||||||||||| | |||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  31002381 aaagctttattcaggtattcctaataccctaattcttgatattcttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatatttt 31002475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 21 - 215
Target Start/End: Original strand, 31008259 - 31008453
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  31008259 accggttgaggaagaaccaaattagtcgccgctaactctattgtgtgtttcagatcatctcctctttttggttatcgttgttgatgagagggctgctaca 31008358  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||| ||  |||||||||||||||||||| | |||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  31008359 aaagctttattcaggtattcctaataccctaattcttgatattcttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatatttt 31008453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 21 - 215
Target Start/End: Original strand, 13456004 - 13456198
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||        
T  13456004 accggttgaggaagaaccaaatcagccaccgctaactctattgtgtgtttcagatcatctcctctctttggttatagttgttgatgagagggctgccttg 13456103  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||||||  |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  13456104 aaagctttatccaggtattcctaataccctaattcttaatacccttgataaatcaaacatgtcgtagatccgatcataatcaggttcaatgtttt 13456198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 21 - 215
Target Start/End: Original strand, 13461945 - 13462139
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||        
T  13461945 accggttgaggaagaaccaaatcagccaccgctaactctattgtgtgtttcagatcatctcctctctttggttatagttgttgatgagagggctgccttg 13462044  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||||||  |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  13462045 aaagctttatccaggtattcctaataccctaattcttaatacccttgataaatcaaacatgtcgtagatccgatcataatcaggttcaatgtttt 13462139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 28683200 - 28683006
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||   |||| ||||||||||||||||||||||||| ||         
T  28683200 accggttgaggaagaaccaaatcagccgctgttaactctattgtgtgtttcagatcatccactctccttggttatcgttgttgatgagagggttgtcttg 28683101  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||||||  |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28683100 aaagctttatccaggtattcctaataccctaattcttaataaccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 28683006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 35090907 - 35090710
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctatt--------gtgtgtttcagatcatctcatctctttggttatcgttgttgatgagaggg 112  Q
    |||||||||||||||| ||||||||||||||||||| |||||        || |||||||||||| |||     | || |||| |||| || ||||||||    
T  35090907 accggttgaggaagaaccaaatcagccgccgctaaccctatttatttattgtttgtttcagatcacctc-----tctgtttattgttgatgctgagaggg 35090813  T
Q  113 ctgctacaaaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgt 212  Q
    |||| |  |||||||||||||  |||||||||||| ||||||  |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  35090812 ctgccatgaaagctttatccaggtattcctaatacactaattgttaatattcttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgt 35090713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 35084934 - 35084737
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctatt--------gtgtgtttcagatcatctcatctctttggttatcgttgttgatgagaggg 112  Q
    |||||||||||||||| ||||||||||||||||||| |||||        || |||||||||||| |||     | || |||| |||| || ||||||||    
T  35084934 accggttgaggaagaaccaaatcagccgccgctaaccctatttatttattgtttgtttcagatcacctc-----tctgtttattgttgatgctgagaggg 35084840  T
Q  113 ctgctacaaaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgt 212  Q
    |||| |  |||||||||||||  |||||||||||| ||||||  |||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  35084839 ctgccatgaaagctttatccaggtattcctaatacactaattgttaatattcttgataaatcaaacatgtcgtagatccgatcataatcattttcaatgt 35084740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 97 - 215
Target Start/End: Complemental strand, 11048732 - 11048614
Alignment:
Q  97 gttgttgatgagagggctgctacaaaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatca 196  Q
    |||||||  ||||||||||  | ||||||||||||||| |||||||| | ||||||||| ||||||||||| || |||||||||| |||| |||  ||||    
T  11048732 gttgttgtcgagagggctgtcataaaagctttatccaagtattcctagtgccctaattcttaatatccttggtacatcaaacatgacgtatatccaatca 11048633  T
Q  197 taatcatgttcaatgtttt 215  Q
    |||||||||||||||||||    
T  11048632 taatcatgttcaatgtttt 11048614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 215
Target Start/End: Original strand, 23343580 - 23343659
Alignment:
Q  136 tattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||||||| || || |||||||||||||||||||||||||||||||||  | ||||| ||||||||||||||||    
T  23343580 tattcctaataccccaactcttaatatccttgataaatcaaacatgtcgtagattcgttcatattcatgttcaatgtttt 23343659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 35438960 - 35438770
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaa-ctctattgtgtgtttcagatcatctcatctc----tttggttatcgttgttgatgagagggctg 115  Q
    |||||||||||||||| |||||||||||||||||| |  |  ||| |||||||||||| ||| ||||    | | ||| | |||||||  |||| |||||    
T  35438960 accggttgaggaagaaccaaatcagccgccgctaaccgttgatgtttgtttcagatcacctcctctctccttatcgttgttgttgttgtcgagacggctg 35438861  T
Q  116 ctacaaaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    | |  |||||||||| ||  |||||||||||||||| ||| ||          |||||||||||||||||||||| ||||||||||||||||||||||||    
T  35438860 ccatgaaagctttatacaggtattcctaataccctatttccta---------gtaaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 35438770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 215
Target Start/End: Original strand, 29833255 - 29833306
Alignment:
Q  164 cttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    ||||||||||||||||||| || |||| ||||||||| ||||||||| ||||    
T  29833255 cttgataaatcaaacatgttgtcgatccgatcataattatgttcaatatttt 29833306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 159; Significance: 9e-85; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 21 - 215
Target Start/End: Original strand, 10699934 - 10700127
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  10699934 accggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatttcctctctttggttatcgttgttgatgagagggctgctaca 10700033  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||| |||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10700034 aaagttttatccagatattcctaataccctaattcttaatat-cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 10700127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 21 - 215
Target Start/End: Original strand, 36818876 - 36819069
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  36818876 accggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcgttgttgatgagagggcggctaca 36818975  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||||||  |||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  36818976 aaagctttatccaggtattcctaataccctaattcttaatat-cttgataaatcaaacatgtcgtagatccgatcataatcatattcaatgtttt 36819069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 21 - 203
Target Start/End: Original strand, 10705742 - 10705923
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10705742 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcgttgttgatgagagggctgctaca 10705841  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcat 203  Q
    |||||||||||||  || ||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||    
T  10705842 aaagctttatccaggtaatcctaataccctaattcttaatat-cttgataaatcaaacatgtcgtagatccgatcataatcat 10705923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 42993258 - 42993065
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||    
T  42993258 accggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcgttgttgatgagagggtggctaca 42993159  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    ||||||||||| |  |||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42993158 aaagctttatcaaggtattcctaataccctaattcttaatat-cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 42993065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 5542415 - 5542221
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||        
T  5542415 accggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatctcccctctttggttatcgttgttgatgagagggctgccttg 5542316  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    ||||||||||| |  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  5542315 aaagctttatctaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 5542221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 21 - 215
Target Start/End: Original strand, 32890793 - 32890987
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||        
T  32890793 accggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttattgttgttgatgagagggttgccttg 32890892  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||||||  |||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  32890893 aaagctttatccaggtattcctaataccctaattcttaatatccttggtaaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 32890987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 21 - 215
Target Start/End: Original strand, 14417845 - 14418039
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||  |||||||||||||||| |||||| ||||||||||||      
T  14417845 accggttgaggaagaaccaaatcagccgccgctaaaactattgtgtgtttcagatcatcttctctctttggttatcgtcgttgattagagggctgctatg 14417944  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  14417945 aaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 14418039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 21 - 215
Target Start/End: Original strand, 32896917 - 32897111
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||         
T  32896917 accggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttattgttgttgatgagagggttgtcttg 32897016  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||||||  |||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  32897017 aaagctttatccaggtattcctaataccctaattcttaatatccttggtaaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 32897111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 21 - 215
Target Start/End: Original strand, 9935183 - 9935377
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| | |||||||||| |||||||||| ||||||||||||      
T  9935183 accgattgaggaagaaccaaatcagccgccgctaaatctattgtgtgtttcagatcatctcctatctttggttaacgttgttgattagagggctgctatg 9935282  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||| ||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  9935283 aaagatttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatattcaatgtttt 9935377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 86 - 215
Target Start/End: Original strand, 7771202 - 7771330
Alignment:
Q  86 ctttggttatcgttgttgatgagagggctgctacaaaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgt 185  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||  ||||| |||||||||||||| ||||||||||| |||||||||||||||||    
T  7771202 ctttggttatcgttgttgatgagagggttgctacaaaagctt-atccaggtattcttaataccctaattcttaatatccttggtaaatcaaacatgtcgt 7771300  T
Q  186 agatctgatcataatcatgttcaatgtttt 215  Q
    ||||| ||||||||||||||||||||||||    
T  7771301 agatccgatcataatcatgttcaatgtttt 7771330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 21 - 217
Target Start/End: Complemental strand, 22219982 - 22219776
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatg----------agag 110  Q
    |||||||||||||||| ||||||||||||| |||||| |||||| ||||||||||||  |  | |||||| |||||||||||| ||          ||||    
T  22219982 accggttgaggaagaaccaaatcagccgccactaactttattgtttgtttcagatcaattttt-tctttgtttatcgttgttgttggttgttgttgagag 22219884  T
Q  111 ggctgctacaaaagcttta-tccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaa 209  Q
    |||||| |  ||||||| | ||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22219883 ggctgccatcaaagcttcaatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaa 22219784  T
Q  210 tgttttct 217  Q
     |||||||    
T  22219783 agttttct 22219776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 127 - 215
Target Start/End: Complemental strand, 14799564 - 14799477
Alignment:
Q  127 ttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||  |||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  14799564 ttatccaggtattcctaataccctaattcttaatatc-ttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 14799477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 29 - 215
Target Start/End: Complemental strand, 39735795 - 39735613
Alignment:
Q  29 aggaagaatcaaatcagccgccgctaactcta-ttgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctacaaaagctt 127  Q
    |||||||||||||||||||||||||||| ||  |||| |||||||||||| ||  |||||||    | |||||||| |||||||| ||| |  |||  ||    
T  39735795 aggaagaatcaaatcagccgccgctaacccttgttgtttgtttcagatcaccttctctcttt----accgttgttgttgagagggttgccatgaaat-tt 39735701  T
Q  128 tatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    ||||||  ||||||| |||||||| ||| ||||||| |||||||||||||||||||||||||   |||||||||||||||||| ||||    
T  39735700 tatccaggtattccttataccctagttcttaatatctttgataaatcaaacatgtcgtagatacaatcataatcatgttcaatatttt 39735613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 92 - 215
Target Start/End: Complemental strand, 1882939 - 1882813
Alignment:
Q  92 ttatcgttgttgatgagagggctgctacaaaagctttatc--caaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtc-gtaga 188  Q
    |||||||||||| |||||||||||| |  ||||||| |||  ||  |||||||||||||||||||| ||| |||||||||||||||||||||||  ||||    
T  1882939 ttatcgttgttgttgagagggctgccatgaaagcttcatctccaggtattcctaataccctaattcttaacatccttgataaatcaaacatgtcattaga 1882840  T
Q  189 tctgatcataatcatgttcaatgtttt 215  Q
    || | ||||| ||||||||||||||||    
T  1882839 tccgttcatattcatgttcaatgtttt 1882813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 186
Target Start/End: Original strand, 1171250 - 1171414
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaa-ctctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctac 119  Q
    |||||||||||||||| |||||||||||||||||| |  | |||| ||||||||||||  |||||||| || |||  |||| || |||||| ||||| |     
T  1171250 accggttgaggaagaaccaaatcagccgccgctaaccgttgttgtttgtttcagatcacatcatctctctgtttactgttgctgttgagagagctgccat 1171349  T
Q  120 aaaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgta 186  Q
    |||||||||| |||  ||||||||||| |||||||| |  ||| |||||||||||||| ||||||||    
T  1171350 aaaagctttaaccaggtattcctaata-cctaattcttgttat-cttgataaatcaaatatgtcgta 1171414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 39727563 - 39727381
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctat-tgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctac 119  Q
    |||||||||||||||| ||||||||| ||||||||| ||   ||| |||||||||||| ||  |||||||    | |||||||| |||||||| ||| |     
T  39727563 accggttgaggaagaaccaaatcagcagccgctaacccttgctgtttgtttcagatcaccttctctcttt----accgttgttgttgagagggttgccaa 39727468  T
Q  120 aaaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
     |||| ||| ||||  |||| || |||||||||||| |||||||||||||||||||||||||         |||||||||||||||||||||||||    
T  39727467 gaaagttttttccaggtatttcttataccctaattcttaatatccttgataaatcaaacatg---------tgatcataatcatgttcaatgtttt 39727381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 56
Target Start/End: Original strand, 42033705 - 42033740
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaac 56  Q
    |||||||||||||||| |||||||||||||||||||    
T  42033705 accggttgaggaagaaccaaatcagccgccgctaac 42033740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 159; Significance: 9e-85; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 21 - 211
Target Start/End: Original strand, 25354116 - 25354305
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  25354116 accggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcgttgttgatgagagggctgctaca 25354215  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatg 211  Q
    |||||||||||||  |||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25354216 aaagctttatccaggtattcctaataccctaattcttaatat-cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatg 25354305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 4580576 - 4580382
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| || ||||    
T  4580576 accggttgaggaagaaccaaatcagccgccgctaactctattgcgtgtttcagatcatctcctctctttggttatcgttgttgatgagagggttgttaca 4580477  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||||||  |||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  4580476 aaagctttatccaggtattcctaataccctaattcttaatatccttggtaaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 4580382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 8651058 - 8650864
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||        
T  8651058 accggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcgttgttgatgagagggctgccttg 8650959  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8650958 aaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 8650864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 21 - 215
Target Start/End: Original strand, 25343529 - 25343722
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  25343529 accggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcgttgttgatgaaagggctgctaca 25343628  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    ||||||||||| |  |||||||||||| ||||||| |||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  25343629 aaagctttatctaggtattcctaatactctaattcttaatat-cttgataaatcaaaaatgtcgtagatccgatcataatcatgttcaatgtttt 25343722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 21191121 - 21190927
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||        
T  21191121 accggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcatatcatctcctctctttggttatcgttgttgatgagagggctgccttg 21191022  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||||||  |||| ||||||||||||||| ||||||| ||||||||||||| || ||||||||| ||||||||||||||||||||||||    
T  21191021 aaagctttatccaggtatttctaataccctaattcttaatatctttgataaatcaaatatatcgtagatccgatcataatcatgttcaatgtttt 21190927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 74 - 215
Target Start/End: Complemental strand, 32035488 - 32035347
Alignment:
Q  74 atcatctcatctctttggttatcgttgttgatgagagggctgctacaaaagctttatccaaatattcctaataccctaattcgtaatatccttgataaat 173  Q
    |||||||| ||||||||||||||||||||||||||||||||||    |||| ||||||||  |||||||||||||||||||| ||||| |||||||||||    
T  32035488 atcatctcctctctttggttatcgttgttgatgagagggctgccttgaaaggtttatccaggtattcctaataccctaattcttaataaccttgataaat 32035389  T
Q  174 caaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  32035388 caaacatgtcgtagatccgatcataatcatgttcaatgtttt 32035347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 21782941 - 21782814
Alignment:
Q  88 ttggttatcgttgttgatgagagggctgctacaaaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtag 187  Q
    |||||||||||||||||||||||||||||    |||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  21782941 ttggttatcgttgttgatgagagggctgccttgaaagctttatccagctattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtag 21782842  T
Q  188 atctgatcataatcatgttcaatgtttt 215  Q
    ||| ||||||||||||||||||||||||    
T  21782841 atccgatcataatcatgttcaatgtttt 21782814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 25 - 215
Target Start/End: Complemental strand, 31756471 - 31756276
Alignment:
Q  25 gttgaggaagaatcaaatcagccgccgctaactctat--tgtgtgtttcagatcatc---tcatctctttggttatcgttgttgatgagagggctgctac 119  Q
    |||||||||||| ||||||||||||||||||| ||||  ||||||||||||||||||   || ||||| ||  ||| |||| || |||||||||||  |     
T  31756471 gttgaggaagaaccaaatcagccgccgctaaccctatattgtgtgtttcagatcatcacctcctctctctgtgtatggttgctgttgagagggctgtcat 31756372  T
Q  120 aaaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
     |||||| |||||| |||||| |||||||||||||| ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||    
T  31756371 gaaagctctatccagatattcataataccctaattcttaatatccttgataattcaaacatgtcgtagatccgattataatcatgttcaatgtttt 31756276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 136 - 215
Target Start/End: Complemental strand, 8662921 - 8662842
Alignment:
Q  136 tattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8662921 tattcctaatagcctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 8662842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 97 - 215
Target Start/End: Complemental strand, 21770735 - 21770619
Alignment:
Q  97 gttgttgatgagagggctgctacaaaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatca 196  Q
    ||||||| |||||||||||| | ||||||||||| || |||||||||||||  |||||| | |||||||||||||||||||||||||||||||| | |||    
T  21770735 gttgttgttgagagggctgccataaaagctttattcagatattcctaatac--taattcttgatatccttgataaatcaaacatgtcgtagatccgttca 21770638  T
Q  197 taatcatgttcaatgtttt 215  Q
    || | ||||||||||||||    
T  21770637 tatttatgttcaatgtttt 21770619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 97 - 215
Target Start/End: Complemental strand, 21783486 - 21783370
Alignment:
Q  97 gttgttgatgagagggctgctacaaaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatca 196  Q
    ||||||| |||||||| ||| | ||||||||||| ||  ||||||||||||  |||||| | |||||||||||||||||||||||||||||||| | |||    
T  21783486 gttgttgttgagaggggtgccataaaagctttattcaggtattcctaatac--taattcttgatatccttgataaatcaaacatgtcgtagatccgttca 21783389  T
Q  197 taatcatgttcaatgtttt 215  Q
    || | ||||||||||||||    
T  21783388 tatttatgttcaatgtttt 21783370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 97 - 215
Target Start/End: Complemental strand, 21789709 - 21789593
Alignment:
Q  97 gttgttgatgagagggctgctacaaaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatca 196  Q
    ||||||| |||||||| ||| | ||||||||||| ||  ||||||||||||  |||||| | |||||||||||||||||||||||||||||||| | |||    
T  21789709 gttgttgttgagaggggtgccataaaagctttattcaggtattcctaatac--taattcttgatatccttgataaatcaaacatgtcgtagatccgttca 21789612  T
Q  197 taatcatgttcaatgtttt 215  Q
    || | ||||||||||||||    
T  21789611 tatttatgttcaatgtttt 21789593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 97 - 215
Target Start/End: Complemental strand, 21197198 - 21197082
Alignment:
Q  97 gttgttgatgagagggctgctacaaaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatca 196  Q
    ||||||| |||||||||||| | ||||| ||||||||  ||||| ||||||  |||||| | |||||||||||||||||||||||| ||||||| | |||    
T  21197198 gttgttgttgagagggctgccataaaagatttatccaggtattcataatac--taattcttgatatccttgataaatcaaacatgttgtagatccgttca 21197101  T
Q  197 taatcatgttcaatgtttt 215  Q
    || | ||||||||||||||    
T  21197100 tacttatgttcaatgtttt 21197082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 97 - 215
Target Start/End: Original strand, 17581615 - 17581724
Alignment:
Q  97 gttgttgatgagagggctgctacaaaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatca 196  Q
    ||||||| |||||||||||  |  |||||||||||||  ||||||||||||||||||||         ||| ||||||||||||||||||||||  || |    
T  17581615 gttgttgttgagagggctgtcatgaaagctttatccaggtattcctaataccctaattc---------ttggtaaatcaaacatgtcgtagatcctataa 17581705  T
Q  197 taatcatgttcaatgtttt 215  Q
    |||||||||||||||||||    
T  17581706 taatcatgttcaatgtttt 17581724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 215
Target Start/End: Original strand, 18778564 - 18778681
Alignment:
Q  98 ttgttgatgagagggctgctacaaaagctttatccaaatattcctaataccc-taattcgtaatatccttgataaatcaaacatgtcgtagatctgatca 196  Q
    |||||| | |||||||||| |  |||| ||||||||  ||||||||| |||| |||||| ||||||  ||||||||||||| | |||||||||| |||||    
T  18778564 ttgttgttaagagggctgccatgaaagttttatccaggtattcctaaaacccctaattcttaatata-ttgataaatcaaatacgtcgtagatccgatca 18778662  T
Q  197 taatcatgttcaatgtttt 215  Q
    |||| |||||||| |||||    
T  18778663 taattatgttcaacgtttt 18778681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 211
Target Start/End: Complemental strand, 34603449 - 34603395
Alignment:
Q  157 taatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatg 211  Q
    ||||||||||||||||||||||||| | |||||| ||||||||| ||||||||||    
T  34603449 taatatccttgataaatcaaacatgccatagatccgatcataattatgttcaatg 34603395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 211
Target Start/End: Complemental strand, 34724726 - 34724672
Alignment:
Q  157 taatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatg 211  Q
    ||||||||||||||||||||||||| | |||||| ||||||||| ||||||||||    
T  34724726 taatatccttgataaatcaaacatgccatagatccgatcataattatgttcaatg 34724672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 190
Target Start/End: Original strand, 6098000 - 6098053
Alignment:
Q  136 tattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatc 190  Q
    |||||||||||||||||||| ||| ||| ||||||||||||||| ||||||||||    
T  6098000 tattcctaataccctaattcttaacatc-ttgataaatcaaacacgtcgtagatc 6098053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 56
Target Start/End: Complemental strand, 21197285 - 21197250
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaac 56  Q
    |||||||||||||||| |||||||||||||||||||    
T  21197285 accggttgaggaagaaccaaatcagccgccgctaac 21197250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 159; Significance: 9e-85; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 33461647 - 33461454
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||    
T  33461647 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttgattatcgttgttgatgagagggctgctgca 33461548  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    ||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  33461547 aaagctttatccagatattcctaataccctaattcttaatat-cttgataaatcaaacatgtcgtaaatccgaccataatcatgttcaatgtttt 33461454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 23 - 215
Target Start/End: Complemental strand, 33458520 - 33458328
Alignment:
Q  23 cggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctacaaa 122  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  33458520 cggttgagaaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaagaa 33458421  T
Q  123 agctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  33458420 agctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatatttt 33458328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 6257460 - 6257266
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||     
T  6257460 accggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatctcctcactttggttatcgttgttgatgagagggctgctacg 6257361  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||||||  ||||||||||| |||||||| ||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  6257360 aaagctttatccaggtattcctaatatcctaattcttaacatccttgataaatcaaacatgttgtagatccgatcataatcatgttcaatgtttt 6257266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 21 - 215
Target Start/End: Original strand, 24287891 - 24288085
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||      
T  24287891 accggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcgttgttgattagagggctgctatg 24287990  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||| ||||||||  |||||||||||||||||||| ||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  24287991 aaagttttatccaggtattcctaataccctaattcttaataaccttgataaatcaaacatgtcgtagatacgatcataatcatgttcaatgtttt 24288085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 23 - 215
Target Start/End: Complemental strand, 10739592 - 10739400
Alignment:
Q  23 cggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctacaaa 122  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    ||    
T  10739592 cggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcaaatcatctcctctctttggttatcgttgttgatgagagggctgccttgaa 10739493  T
Q  123 agctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    || ||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10739492 aggtttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 10739400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 23 - 215
Target Start/End: Complemental strand, 10953361 - 10953169
Alignment:
Q  23 cggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctacaaa 122  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    ||    
T  10953361 cggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcaaatcatctcctctctttggttatcgttgttgatgagagggctgccttgaa 10953262  T
Q  123 agctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    || ||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10953261 aggtttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 10953169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 23 - 215
Target Start/End: Complemental strand, 10733499 - 10733307
Alignment:
Q  23 cggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctacaaa 122  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    ||    
T  10733499 cggttgaggaagaaccaaatcagccgtcgctaactctattgtgtgtttcaaatcatctcctctctttggttatcgttgttgatgagagggctgccttgaa 10733400  T
Q  123 agctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    || ||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10733399 aggtttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 10733307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 23 - 215
Target Start/End: Complemental strand, 10947268 - 10947076
Alignment:
Q  23 cggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctacaaa 122  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    ||    
T  10947268 cggttgaggaagaaccaaatcagccgtcgctaactctattgtgtgtttcaaatcatctcctctctttggttatcgttgttgatgagagggctgccttgaa 10947169  T
Q  123 agctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    || ||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10947168 aggtttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 10947076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 24 - 215
Target Start/End: Original strand, 48160867 - 48161057
Alignment:
Q  24 ggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctacaaaa 123  Q
    ||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  48160867 ggttgaggaagaaccaaattagtcgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcgttgttgatgagagggctgttacaaaa 48160966  T
Q  124 gctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    ||||||| ||  |||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  48160967 gctttattcaggtattcctaataccctaattcttaatat-cttgataaatcaaacatgtcgtagatccgatcataattatgttcaatgtttt 48161057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 24 - 215
Target Start/End: Original strand, 48167086 - 48167276
Alignment:
Q  24 ggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctacaaaa 123  Q
    ||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  48167086 ggttgaggaagaaccaaattagtcgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcgttgttgatgagagggctgttacaaaa 48167185  T
Q  124 gctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    ||||||| ||  |||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  48167186 gctttattcaggtattcctaataccctaattcttaatat-cttgataaatcaaacatgtcgtagatccgatcataattatgttcaatgtttt 48167276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 10733605 - 10733512
Alignment:
Q  23 cggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgc 116  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  10733605 cggttgaggaagaaccaaatcagccgtcgctaactctattgtgtgtttcaaatcatctcctctctttggttatcgttgttgatgagagggctgc 10733512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 10947374 - 10947281
Alignment:
Q  23 cggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgc 116  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  10947374 cggttgaggaagaaccaaatcagccgtcgctaactctattgtgtgtttcaaatcatctcctctctttggttatcgttgttgatgagagggctgc 10947281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 21 - 211
Target Start/End: Complemental strand, 44831874 - 44831677
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctatt--gtgtgtttcagatcatctcat-----ctctttggttatcgttgttgatgagagggc 113  Q
    |||||||||||||||| || |||||||| ||||||| |||||  ||||||||||||||||| | |     |||| || |||||||||||| ||||||||     
T  44831874 accggttgaggaagaaccacatcagccgtcgctaaccctattttgtgtgtttcagatcatcaccttctctctctctgtttatcgttgttgttgagagggt 44831775  T
Q  114 tgctacaaaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatg 211  Q
    || ||  ||||||| ||| |  ||||| |||||||||| ||| ||||||||||||||||| |||||||||||||||  ||||||| ||||||||||||    
T  44831774 tgttatcaaagcttcatctaggtattcttaataccctagttcttaatatccttgataaattaaacatgtcgtagattcgatcatattcatgttcaatg 44831677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 25 - 215
Target Start/End: Original strand, 49976493 - 49976685
Alignment:
Q  25 gttgaggaagaatcaaatcagccgccgctaactcta---ttgtgtgtttcagatcatc---tcatctctttggttatcgttgttgatgagagggctgcta 118  Q
    |||||||||||| ||||||||||||||||||| ||    |||||||||| ||||||||   || |||||||| |||||||||||| |||||||  || ||    
T  49976493 gttgaggaagaaccaaatcagccgccgctaacccttattttgtgtgtttgagatcatcacctcctctctttgtttatcgttgttgttgagaggagtgtta 49976592  T
Q  119 caaaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
      ||||||| |||    |||||||||||| ||||||   | ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  49976593 tcaaagcttcatctgg-tattcctaatactctaatt---attatccttgataaatcaaacatgtcgtagatccgatcataatcatattcaatgtttt 49976685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 21 - 208
Target Start/End: Original strand, 4632286 - 4632482
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcaga-------tcatctcatctc---tttggttatcgttgttgatgagag 110  Q
    |||||||||||||||| ||||||||  |||||||||| | || |||||||||||       ||||| ||||||   |||| |||| ||||||| ||| ||    
T  4632286 accggttgaggaagaaccaaatcagaagccgctaactatgttttgtgtttcagaattcagatcatcacatctcctatttgtttatggttgttgttgaaag 4632385  T
Q  111 ggctgctacaaaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttca 208  Q
    || ||  |  |||||||||||||| |||| || |||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  4632386 ggttgtcatgaaagctttatccaagtatttctgataccctaattcttaatatc-ttgataaatcaaacatgtcgtagatccgatcataatcatgttca 4632482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 97 - 215
Target Start/End: Complemental strand, 26963518 - 26963402
Alignment:
Q  97 gttgttgatgagagggctgctacaaaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatca 196  Q
    ||||||| |||||||||| | | ||||||||||||||  ||||||||||||  |||||| | |||||||||||||||||||||||||||||||| | |||    
T  26963518 gttgttgttgagagggctaccataaaagctttatccaggtattcctaatac--taattcttgatatccttgataaatcaaacatgtcgtagatccgttca 26963421  T
Q  197 taatcatgttcaatgtttt 215  Q
    || | ||||||||||||||    
T  26963420 tacttatgttcaatgtttt 26963402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 215
Target Start/End: Original strand, 3769587 - 3769665
Alignment:
Q  136 tattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    ||||||||||||| |||||  ||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||    
T  3769587 tattcctaatacc-taattattaatatccttgattaatgaaacatgtcgtagatccgatcataatcatgttcaatgtttt 3769665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 215
Target Start/End: Original strand, 50168624 - 50168691
Alignment:
Q  148 cctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||  |||||| ||||||||||||||||||||||| ||  ||||||||||||||||||||||||    
T  50168624 cctaattgttaatattcttgataaatcaaacatgtcgtatattcgatcataatcatgttcaatgtttt 50168691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 9237403 - 9237459
Alignment:
Q  157 taatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtt 213  Q
    |||||| ||||||||||||||||||||||| ||| || ||||||||| |||||||||    
T  9237403 taatatacttgataaatcaaacatgtcgtaaatccgagcataatcatattcaatgtt 9237459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 35177703 - 35177770
Alignment:
Q  23 cggttgaggaagaatcaaatcagccgccgctaactcta--ttgtgtgtttcagatcatctcatctctt 88  Q
    |||||||| || ||||||||||| ||||||||||||||  ||||||||||||||||||| | ||||||    
T  35177703 cggttgagaaataatcaaatcaggcgccgctaactctatgttgtgtgtttcagatcatcacctctctt 35177770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 215
Target Start/End: Original strand, 28704553 - 28704609
Alignment:
Q  159 atatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    ||||| |||||| ||||||||||| ||||||||||||||| ||||| ||||| ||||    
T  28704553 atatctttgatacatcaaacatgttgtagatctgatcatattcatgctcaatatttt 28704609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 50155972 - 50156046
Alignment:
Q  131 ccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgtt 206  Q
    |||||||||||| ||||  |||||  |||||| ||||||||||||||||||||||| ||| |||| |||| |||||    
T  50155972 ccaaatattccttatacg-taattgttaatattcttgataaatcaaacatgtcgtatatccgatcttaattatgtt 50156046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 215
Target Start/End: Original strand, 50427387 - 50427473
Alignment:
Q  136 tattcctaataccctaattcgtaatatccttgataaatc--------aaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||||||||||||| |||| | |||||||||||        |||||||||||| ||| |||||||||||| |||||||||||    
T  50427387 tattcctaataccctaattcttaatcttcttgataaatcaataaattaaacatgtcgtacatccgatcataatcat-ttcaatgtttt 50427473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 159; Significance: 9e-85; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 25381790 - 25381596
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  25381790 accggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcgttgttgatgagagggctgttaca 25381691  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||||||  |||||||||||||||||||| ||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||    
T  25381690 aaagctttatccaggtattcctaataccctaattcttaatatccttggtaaatcaaacatttcgtagatccgatcataatcatgttcaatgtttt 25381596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 25387759 - 25387565
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |       
T  25387759 accggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcgttgttgatgagagggctgttttt 25387660  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25387659 aaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 25387565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 21 - 215
Target Start/End: Original strand, 31057949 - 31058142
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    ||||||| |||||||| |||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||    
T  31057949 accggttaaggaagaaccaaatcagtcgccgctaactctattgtgtgttttagatcatctcctctctttggttatcgttgttgatgagagggttgctaca 31058048  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||| ||||||||| ||||| |||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  31058049 aaagttttatccaagtattcttaataccctaattcttaatat-cttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 31058142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 8093101 - 8092907
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactcta-ttgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctac 119  Q
    |||||||||||||||| ||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  8093101 accggttgaggaagaaccaaatcagccgccgctaac-ctagttgtttgtttcagatcatctcatctctttggttatcgttgttgatgagaggactgctac 8093003  T
Q  120 aaaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    ||||||||||||||  ||||||| |||||| ||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  8093002 aaaagctttatccaggtattcctcatacccaaattcttaatatccttgataaatcaaacatgtcatagatccgatcataatcatgttcaatgtttt 8092907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 21 - 215
Target Start/End: Original strand, 31051449 - 31051642
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||    
T  31051449 accggttaaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcgttgttgatgaaagggttgctaca 31051548  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||| ||||||||  ||||| |||||||||||||| |||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  31051549 aaagttttatccaggtattcttaataccctaattcttaatat-cttgataaatcaaacatgtcgtagatccaatcataatcatgttcaatgtttt 31051642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 21 - 215
Target Start/End: Original strand, 34739890 - 34740084
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||        
T  34739890 accggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcattttctctctttggttatcgttgttgatgagagggctgccttg 34739989  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||| ||||| ||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  34739990 aaaggtttattcaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 34740084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 21 - 215
Target Start/End: Original strand, 50306094 - 50306287
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||        
T  50306094 accggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcgttgttgatgagagggctgccttg 50306193  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||||||  ||||||||||| |||||||| |||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  50306194 aaagctttatccaggtattcctaatagcctaattcttaatat-cttgataaatcaaacatgtcgtagatccgattataatcatgttcaatgtttt 50306287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 21 - 215
Target Start/End: Original strand, 1078149 - 1078322
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||                     ||||||||||||| ||||    
T  1078149 accggttgaggaagaaccaaatcagcggccgctaactctattgtgtgtttcagatcatctc---------------------gatgagagggctgttaca 1078227  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||||||  ||||| |||||||||||||| |||||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  1078228 aaagctttatccaggtattcttaataccctaattcttaatattcttggtaaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 1078322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 97 - 215
Target Start/End: Original strand, 44409992 - 44410108
Alignment:
Q  97 gttgttgatgagagggctgctacaaaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatca 196  Q
    ||||||| |||||||||||| | ||||||||||||||  ||||||||||||  |||||| | |||||||||||||||||||||||||||||||| | |||    
T  44409992 gttgttgttgagagggctgccataaaagctttatccaggtattcctaatac--taattcttgatatccttgataaatcaaacatgtcgtagatccgttca 44410089  T
Q  197 taatcatgttcaatgtttt 215  Q
    || | ||||||||||||||    
T  44410090 tatttatgttcaatgtttt 44410108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 66 - 215
Target Start/End: Complemental strand, 24926962 - 24926815
Alignment:
Q  66 tgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctacaaaagctttatc--caaatattcctaataccctaattcgtaatatc 163  Q
    |||||||||||| ||| |||||||    ||||||||||  ||||| ||||| || ||||||| |||  ||  ||||||||||||  |||||| ||||||     
T  24926962 tgtttcagatcacctcctctcttt----atcgttgttgtcgagagtgctgccaccaaagcttcatcttcaggtattcctaatacgttaattcttaatatt 24926867  T
Q  164 cttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    ||||||||||||||||||||||||||| | ||||| | ||||||||||||||    
T  24926866 cttgataaatcaaacatgtcgtagatccgttcatattaatgttcaatgtttt 24926815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 38152109 - 38152048
Alignment:
Q  136 tattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcat 197  Q
    |||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||    
T  38152109 tattcctaataccctaattcttaatatgtttgataaatcaaacatgtcgtagatctgatcat 38152048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 66 - 215
Target Start/End: Complemental strand, 24963910 - 24963763
Alignment:
Q  66 tgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctacaaaagctttatc--caaatattcctaataccctaattcgtaatatc 163  Q
    |||||||||||| ||| |||||||    ||||||||||  ||||||||| | || ||||||| |||  ||  ||||||||||||  |||||| || |||     
T  24963910 tgtttcagatcacctcctctcttt----atcgttgttgtcgagagggctaccaccaaagcttcatcttcaggtattcctaatactttaattcttactatt 24963815  T
Q  164 cttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||||||||||| |||||||| | ||||| ||||||||||||||||    
T  24963814 cttgataaatcaaacatggcgtagatccgttcatattcatgttcaatgtttt 24963763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 121 - 215
Target Start/End: Complemental strand, 12183738 - 12183645
Alignment:
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||| ||  |||||||||||| | ||||| ||||||| ||||||||||||||||||||||||||  |||||||| ||||||||| ||||    
T  12183738 aaagctttattcaggtattcctaatactcaaattcttaatatc-ttgataaatcaaacatgtcgtagatccaatcataattatgttcaatatttt 12183645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 215
Target Start/End: Original strand, 27955216 - 27955259
Alignment:
Q  172 atcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||    
T  27955216 atcaaacatgttgtagatccgatcataatcatgttcaatgtttt 27955259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 56
Target Start/End: Original strand, 44409908 - 44409940
Alignment:
Q  24 ggttgaggaagaatcaaatcagccgccgctaac 56  Q
    ||||||||||||| |||||||||||||||||||    
T  44409908 ggttgaggaagaaccaaatcagccgccgctaac 44409940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 155; Significance: 2e-82; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 21 - 215
Target Start/End: Original strand, 20238855 - 20239049
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||        
T  20238855 accggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttattgttgttgatgagagggctgccttg 20238954  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20238955 aaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 20239049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 28421214 - 28421020
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||        
T  28421214 accggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcgttgttgatgagagggctgccttg 28421115  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||||||  ||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28421114 aaagctttatccaggtattcctaatagcctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 28421020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 21 - 215
Target Start/End: Original strand, 351691 - 351884
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||        
T  351691 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcctct-tttggttatcgttgttgatgagagggctgccttg 351789  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||||||  ||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  351790 aaagctttatccaggtattcctaatagcctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 351884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 24 - 215
Target Start/End: Complemental strand, 3817563 - 3817372
Alignment:
Q  24 ggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctacaaaa 123  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||    |||    
T  3817563 ggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatcttctctctttggttatcgttgttgatgagagggttgccttgaaa 3817464  T
Q  124 gctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    ||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3817463 gctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 3817372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 21 - 210
Target Start/End: Complemental strand, 5979429 - 5979240
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  5979429 accggttgaggaagaaccaaattagtcgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcgttgttgatgagagagctgctaca 5979330  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaat 210  Q
    |||||||||||||  |||||||||||||||||||| ||| |||||| |||||||||||||||||||||||  ||||||||||||||||||    
T  5979329 aaagctttatccaggtattcctaataccctaattcttaacatccttaataaatcaaacatgtcgtagatccaatcataatcatgttcaat 5979240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 24 - 215
Target Start/End: Complemental strand, 3811421 - 3811230
Alignment:
Q  24 ggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctacaaaa 123  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||| |||    |||    
T  3811421 ggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatcttctctcttttgttatcgttgttgatgagagggttgccttgaaa 3811322  T
Q  124 gctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    ||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3811321 gctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 3811230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 21 - 215
Target Start/End: Original strand, 339284 - 339469
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatc---gttgttgatgagagggctgct 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||   ||||||||||||||           
T  339284 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcattgttgttgatgagag------- 339376  T
Q  118 acaaaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
         |||||||||||  ||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  339377 -----agctttatccaggtattcctaatagcctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 339469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 70 - 215
Target Start/End: Complemental strand, 42767501 - 42767356
Alignment:
Q  70 tcagatcatctcatctctttggttatcgttgttgatgagagggctgctacaaaagctttatccaaatattcctaataccctaattcgtaatatccttgat 169  Q
    |||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  42767501 tcagatcatcttctctctttgattatcgttgttgatgagagggctgctacaaaagctttatccagatattcctaataccctaattcttaatatccttgat 42767402  T
Q  170 aaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||| |||||||||||| ||||||||||||||||||| ||||    
T  42767401 aaatcaaatatgtcgtagatccgatcataatcatgttcaatatttt 42767356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 25 - 155
Target Start/End: Original strand, 15843855 - 15843985
Alignment:
Q  25 gttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctacaaaag 124  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||| ||||||||||||  ||||    
T  15843855 gttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttccgatcatctcctctctttggttattgttgttgattagagggctgctatgaaag 15843954  T
Q  125 ctttatccaaatattcctaataccctaattc 155  Q
    ||| |||||  ||||||||||||||||||||    
T  15843955 cttgatccaggtattcctaataccctaattc 15843985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 25 - 155
Target Start/End: Original strand, 15860964 - 15861094
Alignment:
Q  25 gttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctacaaaag 124  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||| ||||||||||||  ||||    
T  15860964 gttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttccgatcatctcctctctttggttattgttgttgattagagggctgctatgaaag 15861063  T
Q  125 ctttatccaaatattcctaataccctaattc 155  Q
    ||| |||||  ||||||||||||||||||||    
T  15861064 cttgatccaggtattcctaataccctaattc 15861094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 24 - 215
Target Start/End: Original strand, 43539887 - 43540083
Alignment:
Q  24 ggttgaggaagaatcaaatcagccgccgctaactctatt--gtgtgtttcagatcatc---tcatctctttggttatcgttgttgatgagagggctgcta 118  Q
    ||||||||||||| |||||||| ||||||||||  ||||  |||||||||||||||||   || |||||||| |||||||||||| |||||||  || ||    
T  43539887 ggttgaggaagaaccaaatcagtcgccgctaaccatattttgtgtgtttcagatcatcacctcctctctttgtttatcgttgttgttgagaggattgtta 43539986  T
Q  119 caaaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
      ||||||| |||||  ||||| |||||||||||||  |||||| ||||||||||||||||||| ||||||| ||||||||||||||||||| ||||    
T  43539987 tcaaagcttcatccaggtattcataataccctaatttttaatattcttgataaatcaaacatgttgtagatccgatcataatcatgttcaatatttt 43540083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 35148264 - 35148065
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctatt--gtgtgtttcagatcatctcatctctt--tggttatcgttgttgatgagagggctgc 116  Q
    |||||||||||||||| |||||||||||| ||| ||  ||||  ||||||||||||||||| || ||  |  |  || | ||||||| |  ||||||| |    
T  35148264 accggttgaggaagaaccaaatcagccgctgctgaccatattttgtgtgtttcagatcatcccaccttctcatatttgttgttgttgttacgagggctac 35148165  T
Q  117 tacaaaagctttatccaaatattcctaataccc-taattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
     |  |||||||||||||  |||||||||||||| |||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  35148164 catgaaagctttatccaggtattcctaatacccctaattcttaatatccttgataaatcaaacgtgtcgtagatccgatcataatcatgttcaatgtttt 35148065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 94 - 215
Target Start/End: Original strand, 26383603 - 26383724
Alignment:
Q  94 atcgttgttgatgagagggctgctacaaaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctga 193  Q
    |||||||||| |||||||||||| |  ||||||| ||| |  |||||||||||||||||||| || ||| ||||||||||||||||||||||||||| ||    
T  26383603 atcgttgttgttgagagggctgccatcaaagcttcatcaaggtattcctaataccctaattcttagtatgcttgataaatcaaacatgtcgtagatccga 26383702  T
Q  194 tcataatcatgttcaatgtttt 215  Q
    |||| |||||||||||| ||||    
T  26383703 tcatgatcatgttcaatatttt 26383724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 92 - 215
Target Start/End: Original strand, 12803973 - 12804098
Alignment:
Q  92 ttatcgttgttgatgagagggctgctacaaaagctttatccaaa--tattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagat 189  Q
    ||||||||||||  |||||||||||||| ||||||| ||||  |  ||||| |||||||||||||| |||||| ||||||||||||||||||||||||||    
T  12803973 ttatcgttgttgtcgagagggctgctaccaaagcttcatccccaggtattcttaataccctaattcttaatattcttgataaatcaaacatgtcgtagat 12804072  T
Q  190 ctgatcataatcatgttcaatgtttt 215  Q
    | | ||||  ||||||||||||||||    
T  12804073 ccgttcatgttcatgttcaatgtttt 12804098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 215
Target Start/End: Original strand, 5849434 - 5849623
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaac-tctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctac 119  Q
    |||||||||||||||| |||||||| |||||||||| | | |||||| |||||||||||    ||||       |||||||||| |||||| ||||  |     
T  5849434 accggttgaggaagaaccaaatcagacgccgctaacatatgttgtgtatttcagatcatagtttctcc------atcgttgttgttgagagagctgtcat 5849527  T
Q  120 aaaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
     ||||||| |||||  ||||||||||| |||||||| | |||||||||||||||||||||||||||||||| | ||||| | ||||||||||||||    
T  5849528 taaagcttcatccaggtattcctaatatcctaattcttgatatccttgataaatcaaacatgtcgtagatccgttcatatttatgttcaatgtttt 5849623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 215
Target Start/End: Complemental strand, 30219438 - 30219307
Alignment:
Q  84 ctctttggttatcgttgttgatgagagggctgctacaaaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtc 183  Q
    ||||||| ||||||||| || ||||| || ||  |  ||||||||||||| |||||||||||||| |||||| ||||||| || ||||||||||||||||    
T  30219438 ctctttgtttatcgttgatgctgagatggttgtcatgaaagctttatccagatattcctaataccataattcttaatatctttaataaatcaaacatgtc 30219339  T
Q  184 gtagatctgatcataatcatgttcaatgtttt 215  Q
    ||||||| | ||||| |||||||||| |||||    
T  30219338 gtagatccgttcatattcatgttcaacgtttt 30219307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 66 - 213
Target Start/End: Complemental strand, 22742130 - 22741988
Alignment:
Q  66 tgtttcagatcatctcatctctttggttatcgttgttgatga-gagggctgctacaaaagctttatccaaatattcctaataccctaattcgtaatatcc 164  Q
    |||||||||||||||| |||||||    |||||||||  | | ||||||||| || | ||||| |||||  ||||||||||||| |||| |  ||||||     
T  22742130 tgtttcagatcatctcctctcttt----atcgttgtttgtcaagagggctgccaccatagcttcatccaggtattcctaatacc-taatcctcaatatc- 22742037  T
Q  165 ttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtt 213  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  22742036 ttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtt 22741988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 147
Target Start/End: Original strand, 7608390 - 7608475
Alignment:
Q  62 tgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctacaaaagctttatccaaatattcctaatac 147  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| | |||  |  |||||||||| || ||||| |||||||    
T  7608390 tgtgtgtttcagatcatctcatctctttggttatcattgttgatgagatgactgtcatcaaagctttattcagatatttctaatac 7608475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 215
Target Start/End: Complemental strand, 18666614 - 18666557
Alignment:
Q  157 taatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    ||||||| ||| |||||||||||||||||| ||||||||||||||| ||||||||||||    
T  18666614 taatatcattgctaaatcaaacatgtcgta-atctgatcataatcaagttcaatgtttt 18666557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 24690848 - 24690881
Alignment:
Q  23 cggttgaggaagaatcaaatcagccgccgctaac 56  Q
    |||||||||||||| |||||||||||||||||||    
T  24690848 cggttgaggaagaaccaaatcagccgccgctaac 24690881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 35150796 - 35150736
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaac--tctattgtgtgtttcagatcatc 79  Q
    ||||||||| ||| || |||||||||||||||||||  | | |||||||||||||||||||    
T  35150796 accggttgaagaataaccaaatcagccgccgctaaccatattttgtgtgtttcagatcatc 35150736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 155; Significance: 2e-82; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 11839980 - 11839786
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||        
T  11839980 accggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcgttgttgatgagagggctgccttg 11839881  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  11839880 aaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 11839786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 38455805 - 38455611
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |     
T  38455805 accggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcgttgttgatgagagggctgcctcg 38455706  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  38455705 aaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgttgtagatccgatcataatcatgttcaatgtttt 38455611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 22 - 215
Target Start/End: Complemental strand, 11846318 - 11846124
Alignment:
Q  22 ccggttgaggaagaatcaaa-tcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||    
T  11846318 ccggttgaggaagaaccaaaatcagccgccgctaactctattgtgtgtttcagatcatcttctctctttggttatcgttgttgatgagagggctgttaca 11846219  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||||||  |||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  11846218 aaagctttatccaggtattcctaataccctaattcttaatatacttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 11846124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 17056048 - 17055854
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||| ||||||||||||      
T  17056048 accggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatctcctatctttggttaccgttgttgattagagggctgctatg 17055949  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17055948 aaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 17055854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 38449318 - 38449124
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |     
T  38449318 accggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcgttgttgatgagagggctgcctcg 38449219  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||| ||||||||  |||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  38449218 aaagttttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgttgtagatccgatcataatcatgttcaatgtttt 38449124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 24 - 215
Target Start/End: Complemental strand, 10760902 - 10760711
Alignment:
Q  24 ggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctacaaaa 123  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    |||    
T  10760902 ggttgaggaagaaccaaatcagtcgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcgttgttgatgagagggctgccttgaaa 10760803  T
Q  124 gctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    ||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10760802 gctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 10760711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 21 - 215
Target Start/End: Original strand, 49151516 - 49151710
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||        
T  49151516 accggttgaggaagaatcaaatcagccaccgctaactctattgtgtgtttcagatcatctcctctctttggttatcgttgttgatgagagggctgccttg 49151615  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||||||  ||||| |||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  49151616 aaagctttatccaggtattcataataccctaattcttaatatccttaataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 49151710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 21 - 215
Target Start/End: Original strand, 49157583 - 49157777
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||        
T  49157583 accggttgaggaagaatcaaatcagccaccgctaactctattgtgtgtttcagatcatctcctctctttggttatcgttgttgatgagagggctgccttg 49157682  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||||||  ||||| |||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  49157683 aaagctttatccaggtattcataataccctaattcttaatatccttaataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 49157777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 21 - 215
Target Start/End: Original strand, 8331691 - 8331885
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||        
T  8331691 accggttgaggaagaaccaaatcagccgccgctaactctattgtgtgttttagatcatctcctctctttggttatcgttgttgacgagagggctgccttg 8331790  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||||||  ||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8331791 aaagctttatccaggtattcctaatagcctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 8331885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 10238467 - 10238273
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||         
T  10238467 accggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcatatcatatcctctctttggttatcgttgttgatgagagggctgtcttg 10238368  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||||||  ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10238367 aaagctttatccaggtattcctaatagcctaattcttaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 10238273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 10244589 - 10244395
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||         
T  10244589 accggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcatatcatctcctctctttggttatcgttgttgatgagagggctgtcttg 10244490  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||||||  ||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10244489 aaagctttatccaggtattcctaatagcctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 10244395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 30051357 - 30051163
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||| |||||||||  |      
T  30051357 accggttgaggaagaatcaaatcagccgtcgctaactctattgtgtgtttcagatcatctcctctctttggttattgttgtcgattagagggctgtaatg 30051258  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  30051257 aaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatctgattataatcatgttcaatatttt 30051163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 42191475 - 42191281
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||        
T  42191475 accggttgaggaagaaccaaatcagccaccgctaactctattgtgtgtttcagatcatctcctctctttggttatagttgttgatgagagggctgccttg 42191376  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||||||  |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  42191375 aaagctttatccaggtattcctaataccctaattcttaatacccttgataaatcaaacatgtcgtagatccgatcataatcaggttcaatgtttt 42191281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 42197417 - 42197223
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||        
T  42197417 accggttgaggaagaaccaaatcagccaccgctaactctattgtgtgtttcagatcatctcctctctttggttatagttgttgatgagagggctgccttg 42197318  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||||||  |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  42197317 aaagctttatccaggtattcctaataccctaattcttaatacccttgataaatcaaacatgtcgtagatccgatcataatcaggttcaatgtttt 42197223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 38 - 215
Target Start/End: Complemental strand, 55003650 - 55003473
Alignment:
Q  38 caaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctacaaaagctttatccaaata 137  Q
    ||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||| ||||||||||||  ||||||||||||| |||    
T  55003650 caaatcagccgccgctaactctattgtgtatttcagatcatcttttctctttggttatcgttgttgattagagggctgctatgaaagctttatccagata 55003551  T
Q  138 ttcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    || ||||||||||||||| |||||| |||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  55003550 tttctaataccctaattcttaatatacttgataaattaaacatgtcgtagatccgatcataatcatgttcaatgtttt 55003473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 77 - 215
Target Start/End: Complemental strand, 17593481 - 17593343
Alignment:
Q  77 atctcatctctttggttatcgttgttgatgagagggctgctacaaaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaa 176  Q
    ||||| ||||||||||||||||||||||||||||||||||  | |||| ||||||||  |||||||||||||||||||| |||||| |||||||||| ||    
T  17593481 atctcctctctttggttatcgttgttgatgagagggctgcctcgaaaggtttatccaggtattcctaataccctaattcttaatattcttgataaattaa 17593382  T
Q  177 acatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  17593381 acatgtcgtagatccgatcataatcatgttcaatgtttt 17593343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 10769224 - 10769130
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctg 115  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  10769224 accggttgaggaagaaccaaatcagccgccgctaactctattgtgtatttcagatcatctcctctctttggttatcgttgttgatgagagggctg 10769130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 121 - 215
Target Start/End: Complemental strand, 10767026 - 10766932
Alignment:
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  10767026 aaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccggtcataatcatgttcaatgtttt 10766932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 23 - 200
Target Start/End: Original strand, 13444964 - 13445144
Alignment:
Q  23 cggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctc---tttggttatcgttgttgatgagagggctgctac 119  Q
    |||||||||||||| ||||||||||||| ||||| || || |||| ||||||||||| ||||||   |||| |||| ||||||  |||||| ||||  |     
T  13444964 cggttgaggaagaaccaaatcagccgccactaaccctgttttgtggttcagatcatcacatctcctctttgtttatggttgttactgagagagctgtcat 13445063  T
Q  120 aaaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataat 200  Q
     || | |||||| |  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  13445064 gaatgttttatctaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataat 13445144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 136 - 215
Target Start/End: Original strand, 34300516 - 34300595
Alignment:
Q  136 tattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||||||||||||| |||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||    
T  34300516 tattcctaataccctaattcttaatatcctttataaatcaaatatgtcgtagatccgatcataatcatgttcaatgtttt 34300595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 53069314 - 53069115
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctatt--gtgtgtttcagatcatctcatctctt--tggttatcgttgttgatgagagggctgc 116  Q
    |||||||||||||||| |||||||||||||||||||  ||||  ||||||||||||||||| || ||  |  |  || | ||||||| | ||| | || |    
T  53069314 accggttgaggaagaaccaaatcagccgccgctaaccatattttgtgtgtttcagatcatcacaccttctcatctttgttgttgttgttaagatgactac 53069215  T
Q  117 tacaaaagctttatccaaatattcctaataccc-taattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
     |  |||| ||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  53069214 catgaaagttttatccaggtattcttaatacccctgattcttaatatccttgataaatcaaacatgtcatagatccgatcataatcatgttcaatgtttt 53069115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 143 - 215
Target Start/End: Complemental strand, 48128180 - 48128108
Alignment:
Q  143 aataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    ||||||||||||| |||||| ||| ||||||||||||||||||||| | ||||||||||||||||||||||||    
T  48128180 aataccctaattcttaatattcttaataaatcaaacatgtcgtagaaccgatcataatcatgttcaatgtttt 48128108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 13837578 - 13837632
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagat 75  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13837578 accggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagat 13837632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 215
Target Start/End: Original strand, 28964910 - 28964966
Alignment:
Q  159 atatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28964910 atatctttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 28964966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 215
Target Start/End: Complemental strand, 12108796 - 12108729
Alignment:
Q  148 cctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||  ||||||||||||||||||||||||||| ||||||  ||||||||||| |||||||||||    
T  12108796 cctaattgttaatatccttgataaatcaaacatgtcttagatcaaatcataatcatattcaatgtttt 12108729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 94 - 215
Target Start/End: Original strand, 46656661 - 46656782
Alignment:
Q  94 atcgttgttgatgagagggctgctacaaaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctga 193  Q
    |||||||||| |||||||| ||  |  ||||||| || ||  |||| |||||||||| ||||  |||||| |||||||||||||||| ||||||||| ||    
T  46656661 atcgttgttgttgagagggttgtcatgaaagcttcattcaggtatttctaataccctcattctcaatatcattgataaatcaaacatatcgtagatccga 46656760  T
Q  194 tcataatcatgttcaatgtttt 215  Q
    ||||||| || || ||||||||    
T  46656761 tcataattatattgaatgtttt 46656782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 26429672 - 26429639
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgcta 54  Q
    |||||||||||||||| |||||||||||||||||    
T  26429672 accggttgaggaagaaccaaatcagccgccgcta 26429639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 151; Significance: 5e-80; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 12686434 - 12686240
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||        
T  12686434 accggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcgttgttgatgagagggctgccttg 12686335  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||||||  ||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12686334 aaagctttatccaggtattcctaatagcctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 12686240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 12692536 - 12692342
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||        
T  12692536 accggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcgttgttgatgagagggctgccttg 12692437  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||||||  ||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12692436 aaagctttatccaggtattcctaatagcctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 12692342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 7389802 - 7389609
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || ||||||    
T  7389802 accggttgaggaagaaccaaatcagtcgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcgttgttgatgagagagcggctaca 7389703  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||||||  |||||||||||||||||||| |||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  7389702 aaagctttatccaggtattcctaataccctaattcttaatat-cttgataaatcaaacatgtcgtggatccgatcataatcatgttcaatgtttt 7389609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 28525641 - 28525447
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||        
T  28525641 accggttgaggaagaatcaaatcagccaccgctgactctattgtgtgtttcagatcatctcctctctttggttatcgttgttgatgagagggctgccttg 28525542  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||||||  ||||| |||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28525541 aaagctttatccaggtattcataataccctaattcttaatatccttaataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 28525447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 24 - 215
Target Start/End: Complemental strand, 28531734 - 28531543
Alignment:
Q  24 ggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctacaaaa 123  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    |||    
T  28531734 ggttgaggaagaatcaaatcagccaccgctgactctattgtgtgtttcagatcatctcctctctttggttatcgttgttgatgagagggctgccttgaaa 28531635  T
Q  124 gctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    ||||||||||  ||||| |||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28531634 gctttatccaggtattcataataccctaattcttaatatccttaataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 28531543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 21 - 215
Target Start/End: Original strand, 41297187 - 41297375
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||| |||        
T  41297187 accggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcacctcctctccttggttatcgttgttgatgagagggttgccttg 41297286  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    ||||      |||  |||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  41297287 aaag------ccaggtattcctaataccctaattctttatatccttgataaatcaaacatgtcgtagatccgatcataattatgttcaatgtttt 41297375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 21 - 215
Target Start/End: Original strand, 30772186 - 30772381
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctat--tgtgtgtttcagatcatctcatct-ct-ttggttatcgttgttgatgagagggctgc 116  Q
    |||||||||||||||||||||||||||||||||||| || |  |||||||||||||||||| || || || ||| |||| ||||||||   |||||||||    
T  30772186 accggttgaggaagaatcaaatcagccgccgctaaccctttgttgtgtgtttcagatcatcacaccttctcttgtttattgttgttga---gagggctgc 30772282  T
Q  117 tacaaaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
     | |||| |||||||||  || ||||||||||||||||| |||||||||||||||||||||||||| || |||| ||||||||||||||||| ||||||    
T  30772283 cataaaaactttatccaggtaatcctaataccctaattcttaatatccttgataaatcaaacatgttgtcgatccgatcataatcatgttcattgtttt 30772381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 21 - 133
Target Start/End: Complemental strand, 32097277 - 32097165
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||      
T  32097277 accggttgaggaagaactaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgattaaagggctgctatg 32097178  T
Q  121 aaagctttatcca 133  Q
    |||||||||||||    
T  32097177 aaagctttatcca 32097165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 95 - 215
Target Start/End: Complemental strand, 32094340 - 32094221
Alignment:
Q  95 tcgttgttgatgagagggctgctacaaaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgat 194  Q
    ||||||||| ||||||||||||||  |||||||||| ||  ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||  ||    
T  32094340 tcgttgttgttgagagggctgctatgaaagctttattcaggtattcctaatacc-taattcttaatatccttgataaatcaaacatgtcgtagatcctat 32094242  T
Q  195 cataatcatgttcaatgtttt 215  Q
    |||||||||||||||||||||    
T  32094241 cataatcatgttcaatgtttt 32094221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 21 - 210
Target Start/End: Original strand, 20500043 - 20500231
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    ||||||| |||||||| ||||||| |||| ||||||  | |||| |||||||||||  ||  ||||| || ||||||||| || |||||||||||| | |    
T  20500043 accggttaaggaagaaccaaatcaaccgctgctaaccttcttgtttgtttcagatcgcctt-tctctctgtttatcgttgatgttgagagggctgccata 20500141  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaat 210  Q
    |||| ||||||||  |||| ||||||| ||||||| || |||||||||||||||||  |||||||||||| |||||||||||||||||||    
T  20500142 aaagttttatccaggtatttctaatactctaattcttagtatccttgataaatcaagtatgtcgtagatccgatcataatcatgttcaat 20500231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 21 - 133
Target Start/End: Complemental strand, 32094476 - 32094364
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||| | ||||||||||      
T  32094476 accggttgaggaagaaccaaattagccgccgctaactctattgtgtgtttcagatcatcttctctctttggttattgttgttgattaaagggctgctatg 32094377  T
Q  121 aaagctttatcca 133  Q
    ||| |||||||||    
T  32094376 aaacctttatcca 32094364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 121 - 215
Target Start/End: Original strand, 24054338 - 24054433
Alignment:
Q  121 aaagctttatccaaatattcctaata-ccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||||||  ||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  24054338 aaagctttatccaggtattcctaatatcccaaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 24054433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 98 - 215
Target Start/End: Complemental strand, 32097138 - 32097022
Alignment:
Q  98 ttgttgatgagagggctgctacaaaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcat 197  Q
    |||||| ||||||| ||||||  |||||||||| ||  || |||||||||| |||||| ||||||||||||||||||||||||||||||||||  |||||    
T  32097138 ttgttgttgagaggactgctatgaaagctttattcaggtaatcctaatacc-taattcttaatatccttgataaatcaaacatgtcgtagatcctatcat 32097040  T
Q  198 aatcatgttcaatgtttt 215  Q
    ||||||||||||||||||    
T  32097039 aatcatgttcaatgtttt 32097022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 30384641 - 30384439
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaa-ctctattgtgtgtttcagat-----catctcatctctttggtt---atcgttgttgatgagagg 111  Q
    |||||||||||||||| |||||||| ||||||||| || | |||||||||||||||     |||||| |||| ||| ||   ||||||| ||  |||||     
T  30384641 accggttgaggaagaaccaaatcagtcgccgctaagctatgttgtgtgtttcagattagatcatctcctctccttgttttagatcgttgatggcgagaga 30384542  T
Q  112 gctgctacaaaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatg 211  Q
    | ||  || ||||||| |||||  ||||| ||||||||| |||| ||||||||||||||||||| ||||||| |||||| |||||||||| |||||||||    
T  30384541 gttgtcacgaaagcttcatccaggtattcttaatacccttattcttaatatccttgataaatcagacatgtc-tagatccgatcataatcgtgttcaatg 30384443  T
Q  212 tttt 215  Q
    ||||    
T  30384442 tttt 30384439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 92 - 215
Target Start/End: Complemental strand, 19059950 - 19059825
Alignment:
Q  92 ttatcgttgttgatgagagggctgctacaaaagctttatc--caaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagat 189  Q
    ||||||||||||  ||||||||||| || ||||||| |||  ||  |||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19059950 ttatcgttgttgtcgagagggctgccaccaaagcttcatctccaggtatttctaataccctaattcttaatatccttgataaatcaaacatgtcgtagat 19059851  T
Q  190 ctgatcataatcatgttcaatgtttt 215  Q
    | | | ||| ||||||| ||| ||||    
T  19059850 ccgtttatattcatgtttaatatttt 19059825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 215
Target Start/End: Complemental strand, 19066247 - 19066168
Alignment:
Q  136 tattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||||| | ||||| ||||| | ||||||||    
T  19066247 tattcctaataccataattcttaatatccttgataaatcaaacatgtcgtagatccgttcatattcatgcttaatgtttt 19066168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 148 - 215
Target Start/End: Original strand, 28542269 - 28542336
Alignment:
Q  148 cctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||| ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||    
T  28542269 cctaattcttaatatccttgataaatcaaacatgtcgtagtttcgatcataatcatgttcaatgtttt 28542336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 16215309 - 16215235
Alignment:
Q  141 ctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    ||||||||||||||  |||||||||||||||||||||||| |||||||||  |||||||||||||| ||||||||    
T  16215309 ctaataccctaatttttaatatccttgataaatcaaacatttcgtagatccaatcataatcatgttaaatgtttt 16215235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 14610073 - 14610141
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctcttt 89  Q
    |||||||||||||||| ||||||||||||||||||| || |||| |||||||||||||||| |||||||    
T  14610073 accggttgaggaagaaccaaatcagccgccgctaacccttttgtttgtttcagatcatctcctctcttt 14610141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 152 - 211
Target Start/End: Original strand, 14610184 - 14610243
Alignment:
Q  152 attcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatg 211  Q
    |||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  14610184 attcttaatatccttgataaatcaaacatgtcgtaaatccgatcataatcatgttcaatg 14610243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 209
Target Start/End: Complemental strand, 37896417 - 37896365
Alignment:
Q  157 taatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaa 209  Q
    |||||| ||||||||||||| ||||||||||||| ||||||||||||||||||    
T  37896417 taatattcttgataaatcaatcatgtcgtagatccgatcataatcatgttcaa 37896365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 215
Target Start/End: Original strand, 26509856 - 26509948
Alignment:
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    ||||||| || || |||||||||||||| |||||| ||||||| ||||| ||||||| ||||||||| |   |||||||| ||||||||||||||    
T  26509856 aaagcttcattcatatattcctaatacc-taattcttaatatc-ttgatgaatcaaatatgtcgtagtttatatcataattatgttcaatgtttt 26509948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 56
Target Start/End: Complemental strand, 19066367 - 19066332
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaac 56  Q
    |||||||||||||||||||||||||| |||||||||    
T  19066367 accggttgaggaagaatcaaatcagctgccgctaac 19066332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 26316922 - 26316853
Alignment:
Q  146 accctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||  ||||| | | ||||||||||||||||| ||||||  |||||| | ||||||||||||||    
T  26316922 accctaattattaataccgtagataaatcaaacatgtcctagatccaatcatattaatgttcaatgtttt 26316853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 874 - 680
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||  |||||||||||||||| |||||| ||||||||||||      
T  874 accggttgaggaagaaccaaatcagccgccgctaaaactattgtgtgtttcagatcatcttctctctttggttatcgtcgttgattagagggctgctatg 775  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  774 aaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 143; Significance: 3e-75; HSPs: 2)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 21 - 215
Target Start/End: Original strand, 12300 - 12494
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||        
T  12300 accggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcgttgttgatgagaggactgccttg 12399  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  12400 aaagctttatccagatattcctaatagcctaattcttaatatccttgataaatcaaacatgtcgtagattcgatcataattatgttcaatgtttt 12494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 21 - 215
Target Start/End: Original strand, 6427 - 6621
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||        
T  6427 accggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcgttgttgatgagagggctgccttg 6526  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||||||  ||||||||||| |||||||| |||||||||||||||||||||||||| ||||||    ||||||||||||||||||||||    
T  6527 aaagctttatccaggtattcctaatagcctaattcttaatatccttgataaatcaaacatgttgtagattcagtcataatcatgttcaatgtttt 6621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0440 (Bit Score: 139; Significance: 7e-73; HSPs: 1)
Name: scaffold0440
Description:

Target: scaffold0440; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 1449 - 1255
Alignment:
Q  21 accggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctaca 120  Q
    ||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||        
T  1449 accggttgaggaaaaaccaaatcagtcgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcgttgttgatgagagggatgccttg 1350  T
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    |||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  1349 aaagctttatccaggtattcctaataccctaattcttaatatccttgataaatcaaacatatcgtagatccgatcataatcatgttcaatgtttt 1255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 129; Significance: 7e-67; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 47 - 215
Target Start/End: Original strand, 5465 - 5633
Alignment:
Q  47 cgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctacaaaagctttatccaaatattcctaata 146  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    |||||||||||||  |||||||||||    
T  5465 cgccgctaactctattgtgtgtttcagatcatctcctctctttggttatcgttgttgatgagagggctgccttgaaagctttatccaggtattcctaata 5564  T
Q  147 ccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
     |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  5565 gcctaattcttaatatccttgataaatcaaacatgtcgtagatccgatcataatcatgttcaatgtttt 5633  T

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Target: scaffold0012 (Bit Score: 124; Significance: 7e-64; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 24 - 215
Target Start/End: Complemental strand, 173142 - 172951
Alignment:
Q  24 ggttgaggaagaatcaaatcagccgccgctaactctattgtgtgtttcagatcatctcatctctttggttatcgttgttgatgagagggctgctacaaaa 123  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||      |||    
T  173142 ggttgaggaagaaccaaatcagccgccgctaactctattgtgtgtttcagatcatcttctctctttggttatcgttgttgataagagggctatcttgaaa 173043  T
Q  124 gctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    ||||||||||  ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||    
T  173042 gctttatccatgtattcctaatatcctaattcttaatatccttgataaattaaacatgtcgtagatccgatcataatcattttcaatgtttt 172951  T

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Target: scaffold1114 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold1114
Description:

Target: scaffold1114; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 23 - 203
Target Start/End: Original strand, 990 - 1174
Alignment:
Q  23 cggttgaggaagaatcaaatcagccgccgctaactctat-tgtgtgtttcagatcatctca---tctctttggttatcgttgttgatgagagggctgcta 118  Q
    |||||||||||||| ||||||||||||| ||||| ||   |||||||||| ||||||| ||   ||||||   |||| |||| || |||||| ||||| |    
T  990 cggttgaggaagaaccaaatcagccgccactaacccttggtgtgtgtttccgatcatcacaccttctcttgttttattgttgatgttgagagagctgcca 1089  T
Q  119 caaaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcat 203  Q
      |||| |||||||| ||||| ||||||| ||||||  |||||| | |||||| ||||||||||||| |||| ||||||||||||    
T  1090 tgaaagttttatccagatatttctaatactctaattgttaatatgcatgataagtcaaacatgtcgttgatccgatcataatcat 1174  T

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Target: scaffold0185 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 5945 - 6021
Alignment:
Q  138 ttcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    ||||||||||| |||||  ||||||  |||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  5945 ttcctaatacc-taattaataatatttttgataaatcaaacatgtcgtagatccgatcatattcatgttcaatgtttt 6021  T

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Target: scaffold0085 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 215
Target Start/End: Original strand, 38434 - 38526
Alignment:
Q  121 aaagctttatccaaatattcctaataccctaattcgtaatatccttgataaatcaaacatgtcgtagatctgatcataatcatgttcaatgtttt 215  Q
    ||||||| |||||  ||||||||||||| |||||  |||||| ||||||||| ||||||||| ||||||| ||||||||  ||||||||||||||    
T  38434 aaagcttcatccaggtattcctaatacc-taattattaatattcttgataaa-caaacatgttgtagatccgatcataactatgttcaatgtttt 38526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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