View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8107_high_4 (Length: 457)
Name: NF8107_high_4
Description: NF8107
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8107_high_4 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 318; Significance: 1e-179; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 108 - 457
Target Start/End: Complemental strand, 27844457 - 27844108
Alignment:
| Q |
108 |
tatttctaaacagccatgaggatgagtatacaaaaatgaaattgatgaaatagaatgatcctttcaaagacactaaaaaggagtgcatgatctctacggt |
207 |
Q |
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| T |
27844457 |
tatttctatatagctatgaggatgagtatacaaaaatgaaattgatgaaatagaatgatcctttcaaagagactaaaaaggagtgcatgatctctacggt |
27844358 |
T |
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| Q |
208 |
ggaatttcagaaagcctacgatttggtaagttggagtttttgggattacatgctttaaagattcaacttcaatgaaaaatgaagaggttggatgagggct |
307 |
Q |
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| T |
27844357 |
ggaatttcagaaagcctacgatttggtaagttggagtttttgggattacatgctttaaagattcaacttcgatgaaaaatgaagaggttggatgagggct |
27844258 |
T |
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| Q |
308 |
tctgtattttcggataatttgttggtattggcgaatgggattcccatggaagagatgaaaattagtagcgggcttatgcaaggtgatctgttagcaccct |
407 |
Q |
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| T |
27844257 |
tctgtattttcggataatttgttggtattggcgaatgggattcccatggaagagatgaaaattagtagcgggcttatgcaaggtgatctgttagtaccct |
27844158 |
T |
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| Q |
408 |
tttgttttattggtggaagtctggaaaagaagtcaggggtttattggata |
457 |
Q |
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| T |
27844157 |
tttgttttattggtggaagtctggaagagaggtcaggggtttattggata |
27844108 |
T |
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