View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8107_low_18 (Length: 371)

Name: NF8107_low_18
Description: NF8107
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8107_low_18
NF8107_low_18
[»] chr4 (77 HSPs)
chr4 (2-344)||(1983150-1983493)
chr4 (2-296)||(39774155-39774451)
chr4 (2-292)||(5112193-5112484)
chr4 (2-344)||(18377274-18377606)
chr4 (2-322)||(10047303-10047628)
chr4 (2-344)||(24333714-24334058)
chr4 (3-348)||(38152289-38152641)
chr4 (4-344)||(37781765-37782108)
chr4 (2-325)||(6743265-6743591)
chr4 (150-344)||(34495822-34496017)
chr4 (2-322)||(42599424-42599747)
chr4 (2-259)||(16623143-16623402)
chr4 (2-348)||(5147573-5147925)
chr4 (2-348)||(25861883-25862223)
chr4 (2-348)||(3777446-3777796)
chr4 (2-322)||(5269050-5269364)
chr4 (64-236)||(34670577-34670747)
chr4 (2-259)||(36315080-36315338)
chr4 (2-259)||(36329289-36329547)
chr4 (4-348)||(54867078-54867427)
chr4 (148-344)||(39245896-39246094)
chr4 (4-344)||(5143162-5143505)
chr4 (2-238)||(5396521-5396758)
chr4 (110-238)||(3796477-3796606)
chr4 (4-344)||(873370-873711)
chr4 (142-322)||(16630671-16630853)
chr4 (65-197)||(18912276-18912409)
chr4 (2-238)||(31985483-31985720)
chr4 (2-82)||(3793930-3794010)
chr4 (2-82)||(16628722-16628801)
chr4 (75-349)||(4956082-4956358)
chr4 (149-226)||(24741962-24742038)
chr4 (149-226)||(29760663-29760739)
chr4 (2-236)||(8689346-8689568)
chr4 (101-176)||(379393-379469)
chr4 (101-176)||(4587971-4588048)
chr4 (184-238)||(16931795-16931849)
chr4 (184-238)||(16934149-16934203)
chr4 (184-238)||(22780379-22780433)
chr4 (3-45)||(28468387-28468429)
chr4 (184-238)||(44599844-44599898)
chr4 (101-176)||(52467433-52467509)
chr4 (110-176)||(12119560-12119628)
chr4 (184-236)||(22782746-22782798)
chr4 (123-176)||(27417044-27417099)
chr4 (123-176)||(36994558-36994613)
chr4 (66-173)||(39593803-39593910)
chr4 (123-176)||(50262780-50262835)
chr4 (184-238)||(6765117-6765171)
chr4 (184-238)||(7941596-7941650)
chr4 (184-238)||(18709170-18709224)
chr4 (184-238)||(22132398-22132452)
chr4 (184-238)||(24348491-24348545)
chr4 (164-226)||(28468542-28468604)
chr4 (184-238)||(38409477-38409531)
chr4 (111-170)||(45687267-45687328)
chr4 (101-176)||(56178716-56178792)
chr4 (122-176)||(5871853-5871909)
chr4 (122-176)||(24969145-24969201)
chr4 (122-176)||(26699522-26699578)
chr4 (123-176)||(8665442-8665497)
chr4 (190-238)||(9148531-9148579)
chr4 (184-240)||(9229215-9229270)
chr4 (123-176)||(9927537-9927592)
chr4 (101-170)||(12739635-12739705)
chr4 (123-176)||(12744004-12744059)
chr4 (123-176)||(12744126-12744181)
chr4 (123-176)||(12745393-12745448)
chr4 (101-170)||(12747841-12747911)
chr4 (123-176)||(26175715-26175770)
chr4 (123-176)||(37740659-37740714)
chr4 (123-176)||(40632479-40632534)
chr4 (108-161)||(48142472-48142527)
chr4 (123-176)||(52095441-52095496)
chr4 (123-176)||(54199985-54200040)
chr4 (123-176)||(54883054-54883109)
chr4 (123-176)||(55085444-55085499)
[»] chr1 (73 HSPs)
chr1 (2-344)||(22819331-22819678)
chr1 (2-344)||(19072829-19073175)
chr1 (2-344)||(19120719-19121065)
chr1 (2-348)||(47098675-47099024)
chr1 (2-344)||(29651713-29652060)
chr1 (2-346)||(47703785-47704133)
chr1 (2-348)||(16124364-16124718)
chr1 (2-344)||(13598301-13598647)
chr1 (110-348)||(9023798-9024031)
chr1 (2-234)||(32889453-32889685)
chr1 (2-347)||(47102689-47103040)
chr1 (2-259)||(9476249-9476509)
chr1 (2-175)||(40816666-40816838)
chr1 (2-317)||(26644748-26645066)
chr1 (2-238)||(3281718-3281954)
chr1 (53-349)||(32736897-32737197)
chr1 (58-240)||(17345425-17345607)
chr1 (2-238)||(21536420-21536656)
chr1 (142-348)||(27104363-27104569)
chr1 (38-170)||(35109423-35109556)
chr1 (2-238)||(13604472-13604710)
chr1 (2-105)||(9022756-9022857)
chr1 (163-348)||(775568-775757)
chr1 (2-238)||(19358691-19358929)
chr1 (2-238)||(19361280-19361518)
chr1 (2-238)||(19379920-19380158)
chr1 (2-238)||(37069780-37070014)
chr1 (64-195)||(918391-918524)
chr1 (2-81)||(27104251-27104330)
chr1 (4-137)||(8281429-8281563)
chr1 (123-226)||(24202740-24202844)
chr1 (110-173)||(11032279-11032342)
chr1 (111-194)||(48382441-48382524)
chr1 (101-176)||(45644433-45644510)
chr1 (102-176)||(928055-928131)
chr1 (4-106)||(11031327-11031428)
chr1 (101-176)||(834246-834322)
chr1 (101-176)||(4552716-4552792)
chr1 (184-238)||(9459425-9459479)
chr1 (184-238)||(9463252-9463306)
chr1 (184-238)||(16226386-16226440)
chr1 (3-45)||(19366157-19366199)
chr1 (101-176)||(22079329-22079405)
chr1 (200-234)||(41361038-41361072)
chr1 (102-176)||(10925237-10925312)
chr1 (65-173)||(10997031-10997140)
chr1 (184-236)||(16231782-16231834)
chr1 (123-176)||(47255419-47255474)
chr1 (101-169)||(3460708-3460778)
chr1 (123-175)||(11348732-11348786)
chr1 (124-176)||(31659273-31659327)
chr1 (101-176)||(8550866-8550942)
chr1 (103-160)||(9036431-9036489)
chr1 (101-176)||(13316431-13316507)
chr1 (184-238)||(23786058-23786112)
chr1 (101-176)||(41360927-41361003)
chr1 (184-238)||(51752582-51752636)
chr1 (181-238)||(23816102-23816159)
chr1 (125-174)||(37918734-37918783)
chr1 (122-176)||(40122277-40122333)
chr1 (287-344)||(40816870-40816927)
chr1 (123-176)||(3156899-3156954)
chr1 (202-238)||(13137982-13138018)
chr1 (123-176)||(13547168-13547223)
chr1 (122-175)||(15820340-15820395)
chr1 (123-176)||(19754529-19754584)
chr1 (123-176)||(28220305-28220360)
chr1 (123-176)||(28265633-28265688)
chr1 (190-238)||(39462744-39462792)
chr1 (243-322)||(48382576-48382655)
chr1 (123-176)||(49918384-49918439)
chr1 (123-176)||(50167254-50167309)
chr1 (123-176)||(50169289-50169344)
[»] chr2 (66 HSPs)
chr2 (2-325)||(15903740-15904063)
chr2 (2-344)||(2869542-2869889)
chr2 (2-344)||(40014829-40015172)
chr2 (2-348)||(31055938-31056290)
chr2 (65-325)||(27149207-27149470)
chr2 (2-259)||(14698859-14699116)
chr2 (2-344)||(33118039-33118382)
chr2 (2-344)||(13569231-13569576)
chr2 (3-344)||(39482833-39483179)
chr2 (2-322)||(20522144-20522469)
chr2 (2-259)||(21629932-21630192)
chr2 (2-350)||(34388753-34389098)
chr2 (2-344)||(8389999-8390344)
chr2 (2-348)||(33528474-33528822)
chr2 (2-238)||(2837879-2838117)
chr2 (2-350)||(8039954-8040311)
chr2 (2-238)||(10707102-10707339)
chr2 (2-322)||(17865127-17865452)
chr2 (2-348)||(34682183-34682535)
chr2 (2-349)||(35397407-35397756)
chr2 (2-344)||(23078321-23078666)
chr2 (21-173)||(18674270-18674423)
chr2 (110-344)||(10445402-10445639)
chr2 (4-221)||(28770626-28770844)
chr2 (64-238)||(1345453-1345628)
chr2 (2-238)||(28259027-28259264)
chr2 (2-317)||(36757612-36757931)
chr2 (47-234)||(42039563-42039752)
chr2 (123-226)||(25398517-25398621)
chr2 (123-226)||(25403655-25403759)
chr2 (2-62)||(10445317-10445377)
chr2 (4-344)||(3277905-3278245)
chr2 (123-226)||(3491772-3491876)
chr2 (122-226)||(11098896-11099002)
chr2 (101-176)||(11151670-11151746)
chr2 (142-259)||(16940200-16940318)
chr2 (142-259)||(17010865-17010983)
chr2 (149-226)||(9296400-9296476)
chr2 (149-226)||(14291510-14291586)
chr2 (123-210)||(25407660-25407748)
chr2 (130-346)||(16388449-16388667)
chr2 (104-176)||(24398072-24398146)
chr2 (101-176)||(11690514-11690590)
chr2 (184-238)||(35215592-35215646)
chr2 (184-238)||(35217969-35218023)
chr2 (101-176)||(42362365-42362441)
chr2 (122-176)||(723823-723879)
chr2 (2-50)||(40739033-40739081)
chr2 (2-45)||(3491956-3491999)
chr2 (68-173)||(12632622-12632725)
chr2 (123-175)||(14633906-14633960)
chr2 (187-238)||(45332187-45332238)
chr2 (184-238)||(19504352-19504406)
chr2 (184-238)||(23452243-23452297)
chr2 (123-170)||(33162535-33162584)
chr2 (184-238)||(36558870-36558924)
chr2 (184-238)||(36561147-36561201)
chr2 (110-176)||(11067327-11067394)
chr2 (101-159)||(14202501-14202560)
chr2 (283-344)||(14699128-14699189)
chr2 (122-168)||(24885694-24885742)
chr2 (123-176)||(1631811-1631866)
chr2 (2-38)||(25409842-25409878)
chr2 (123-176)||(29867903-29867958)
chr2 (123-176)||(36773596-36773651)
chr2 (123-176)||(45726963-45727018)
[»] chr7 (87 HSPs)
chr7 (20-316)||(3047186-3047483)
chr7 (2-344)||(20283992-20284336)
chr7 (2-240)||(5817120-5817358)
chr7 (2-348)||(29159699-29160052)
chr7 (2-350)||(2580282-2580637)
chr7 (6-344)||(2647551-2647891)
chr7 (2-348)||(9189857-9190208)
chr7 (2-344)||(46516155-46516505)
chr7 (2-334)||(4796518-4796852)
chr7 (110-312)||(28617184-28617388)
chr7 (3-322)||(55872-56195)
chr7 (2-325)||(33332300-33332626)
chr7 (2-348)||(49091558-49091910)
chr7 (2-348)||(23402863-23403214)
chr7 (2-259)||(35960804-35961064)
chr7 (2-238)||(9185024-9185252)
chr7 (2-348)||(21983178-21983533)
chr7 (2-159)||(9235432-9235591)
chr7 (2-348)||(21988802-21989155)
chr7 (110-238)||(44848643-44848771)
chr7 (2-238)||(47263688-47263913)
chr7 (2-238)||(2479347-2479583)
chr7 (149-317)||(18408693-18408861)
chr7 (135-272)||(1533427-1533570)
chr7 (184-238)||(7351658-7351712)
chr7 (64-157)||(45685657-45685751)
chr7 (149-226)||(2057987-2058063)
chr7 (123-226)||(21639830-21639934)
chr7 (2-45)||(21640014-21640057)
chr7 (2-45)||(21646212-21646255)
chr7 (184-238)||(31155917-31155971)
chr7 (190-238)||(21369769-21369818)
chr7 (101-159)||(24525992-24526052)
chr7 (123-176)||(2390316-2390371)
chr7 (123-176)||(6432005-6432060)
chr7 (123-176)||(18126678-18126733)
chr7 (5-45)||(18413844-18413884)
chr7 (123-176)||(22270007-22270062)
chr7 (123-176)||(31733048-31733103)
chr7 (2-42)||(44847975-44848015)
chr7 (110-169)||(4162728-4162786)
chr7 (195-238)||(4295940-4295983)
chr7 (149-208)||(18413679-18413737)
chr7 (104-176)||(22328470-22328544)
chr7 (122-176)||(41649090-41649145)
chr7 (184-238)||(1046931-1046985)
chr7 (184-238)||(1049302-1049356)
chr7 (101-176)||(1113670-1113746)
chr7 (184-238)||(1850210-1850264)
chr7 (184-238)||(2935497-2935551)
chr7 (184-238)||(3035953-3036007)
chr7 (110-140)||(5514126-5514156)
chr7 (184-238)||(9027200-9027254)
chr7 (101-176)||(14069912-14069988)
chr7 (101-176)||(14379940-14380016)
chr7 (184-238)||(20297591-20297645)
chr7 (103-160)||(20343911-20343969)
chr7 (184-238)||(22108295-22108349)
chr7 (184-238)||(22137306-22137360)
chr7 (64-130)||(23580827-23580893)
chr7 (101-176)||(35853927-35854003)
chr7 (184-238)||(40550055-40550109)
chr7 (184-238)||(40552333-40552387)
chr7 (123-177)||(4178808-4178864)
chr7 (110-176)||(4253608-4253676)
chr7 (190-238)||(6067204-6067253)
chr7 (149-226)||(20357547-20357622)
chr7 (123-226)||(21646028-21646132)
chr7 (103-161)||(23343989-23344049)
chr7 (110-176)||(23565140-23565208)
chr7 (110-176)||(36574595-36574663)
chr7 (123-177)||(48491613-48491669)
chr7 (123-176)||(2361051-2361106)
chr7 (123-176)||(4508785-4508840)
chr7 (184-232)||(7349285-7349333)
chr7 (190-238)||(21592149-21592197)
chr7 (123-176)||(26417350-26417405)
chr7 (123-176)||(27347851-27347906)
chr7 (65-101)||(27984632-27984668)
chr7 (123-176)||(29608771-29608826)
chr7 (123-176)||(30024811-30024866)
chr7 (101-170)||(31105478-31105548)
chr7 (123-176)||(32358133-32358188)
chr7 (123-176)||(38671301-38671356)
chr7 (123-176)||(41317513-41317568)
chr7 (123-176)||(47674022-47674077)
chr7 (123-176)||(48599413-48599468)
[»] chr5 (61 HSPs)
chr5 (2-326)||(7160754-7161078)
chr5 (2-348)||(11181682-11182035)
chr5 (2-350)||(28832154-28832504)
chr5 (8-348)||(42127266-42127610)
chr5 (20-325)||(2630152-2630460)
chr5 (23-240)||(6741860-6742076)
chr5 (2-238)||(10281761-10281999)
chr5 (66-235)||(33030854-33031024)
chr5 (2-348)||(19588642-19588992)
chr5 (2-348)||(17003809-17004160)
chr5 (2-350)||(31300445-31300798)
chr5 (2-238)||(11916822-11917059)
chr5 (2-350)||(3880197-3880547)
chr5 (2-322)||(12084027-12084349)
chr5 (2-348)||(14520125-14520477)
chr5 (2-238)||(9353182-9353419)
chr5 (2-95)||(24553377-24553470)
chr5 (6-238)||(15464542-15464777)
chr5 (2-238)||(36932198-36932437)
chr5 (7-173)||(30899942-30900108)
chr5 (167-323)||(28537549-28537707)
chr5 (6-188)||(5611202-5611385)
chr5 (123-226)||(38192195-38192299)
chr5 (123-226)||(38219420-38219524)
chr5 (142-348)||(24553499-24553707)
chr5 (184-238)||(4410241-4410295)
chr5 (101-176)||(5887495-5887571)
chr5 (103-176)||(13695770-13695845)
chr5 (135-226)||(35387684-35387775)
chr5 (67-173)||(34842678-34842785)
chr5 (2-45)||(38219604-38219647)
chr5 (184-238)||(15552464-15552518)
chr5 (101-176)||(28278329-28278405)
chr5 (184-238)||(31179377-31179431)
chr5 (184-238)||(31542953-31543007)
chr5 (184-238)||(31545299-31545353)
chr5 (122-176)||(33831713-33831769)
chr5 (123-176)||(213499-213554)
chr5 (65-173)||(31336153-31336261)
chr5 (123-176)||(38747039-38747094)
chr5 (2-50)||(42127220-42127268)
chr5 (122-170)||(3075743-3075793)
chr5 (122-170)||(8566031-8566081)
chr5 (2-45)||(35387868-35387911)
chr5 (184-238)||(3373143-3373197)
chr5 (184-238)||(10749919-10749973)
chr5 (184-226)||(15044708-15044750)
chr5 (184-238)||(15354581-15354635)
chr5 (103-160)||(22536385-22536443)
chr5 (101-176)||(32636837-32636913)
chr5 (184-238)||(38960138-38960192)
chr5 (101-176)||(42428509-42428585)
chr5 (122-176)||(16452113-16452169)
chr5 (181-238)||(18466900-18466957)
chr5 (181-238)||(27910666-27910723)
chr5 (149-226)||(31180236-31180311)
chr5 (127-176)||(538063-538114)
chr5 (123-176)||(13488237-13488292)
chr5 (123-176)||(25412794-25412849)
chr5 (190-238)||(25921479-25921527)
chr5 (123-176)||(39468628-39468683)
[»] chr6 (58 HSPs)
chr6 (2-325)||(24435821-24436144)
chr6 (2-350)||(31979407-31979759)
chr6 (11-348)||(10077027-10077366)
chr6 (2-236)||(21801194-21801429)
chr6 (2-259)||(5572093-5572350)
chr6 (2-348)||(31936484-31936822)
chr6 (2-234)||(14521688-14521921)
chr6 (2-259)||(31086324-31086582)
chr6 (2-231)||(18232862-18233093)
chr6 (4-329)||(31076788-31077121)
chr6 (2-334)||(4629865-4630200)
chr6 (2-344)||(22963602-22963946)
chr6 (2-344)||(23824447-23824791)
chr6 (20-350)||(33721426-33721760)
chr6 (2-238)||(5757328-5757565)
chr6 (46-206)||(1114998-1115159)
chr6 (84-231)||(27165700-27165849)
chr6 (110-238)||(21356046-21356175)
chr6 (47-159)||(99245-99357)
chr6 (21-173)||(30517998-30518150)
chr6 (164-322)||(5017482-5017641)
chr6 (135-226)||(5674753-5674845)
chr6 (2-51)||(22709208-22709257)
chr6 (2-61)||(5017346-5017405)
chr6 (101-176)||(2973018-2973094)
chr6 (20-94)||(5385750-5385824)
chr6 (184-238)||(12195521-12195575)
chr6 (101-160)||(16569046-16569107)
chr6 (164-234)||(22709032-22709102)
chr6 (110-176)||(603167-603234)
chr6 (123-176)||(17758057-17758112)
chr6 (123-176)||(21588965-21589020)
chr6 (123-176)||(21593698-21593753)
chr6 (184-238)||(5165819-5165874)
chr6 (184-238)||(4816237-4816291)
chr6 (184-238)||(5273222-5273276)
chr6 (184-226)||(11856996-11857038)
chr6 (184-226)||(14742457-14742499)
chr6 (103-160)||(16554883-16554941)
chr6 (103-160)||(16631439-16631497)
chr6 (184-238)||(19704573-19704627)
chr6 (184-238)||(20915362-20915416)
chr6 (184-238)||(26932568-26932622)
chr6 (103-160)||(27647875-27647933)
chr6 (184-238)||(29754715-29754769)
chr6 (184-238)||(30967455-30967509)
chr6 (184-238)||(33309110-33309164)
chr6 (184-238)||(33311379-33311433)
chr6 (122-176)||(5043660-5043716)
chr6 (275-340)||(20504792-20504857)
chr6 (123-169)||(28137494-28137542)
chr6 (102-176)||(30834615-30834690)
chr6 (123-176)||(5406279-5406334)
chr6 (123-176)||(5410604-5410659)
chr6 (97-169)||(20504937-20505009)
chr6 (2-62)||(21356225-21356284)
chr6 (123-176)||(26830202-26830257)
chr6 (123-176)||(31404754-31404809)
[»] chr3 (86 HSPs)
chr3 (2-325)||(18552724-18553049)
chr3 (2-348)||(40592621-40592974)
chr3 (2-259)||(1736143-1736404)
chr3 (5-324)||(25795702-25796024)
chr3 (2-348)||(48438110-48438463)
chr3 (2-348)||(3715841-3716193)
chr3 (2-348)||(8370328-8370678)
chr3 (2-344)||(3328196-3328540)
chr3 (2-344)||(26298891-26299235)
chr3 (153-325)||(25929435-25929608)
chr3 (2-193)||(8126685-8126877)
chr3 (78-222)||(4386843-4386988)
chr3 (2-348)||(30709628-30709982)
chr3 (2-348)||(6794554-6794903)
chr3 (2-238)||(36029103-36029340)
chr3 (2-227)||(3323530-3323756)
chr3 (2-259)||(21711211-21711469)
chr3 (32-235)||(40844665-40844867)
chr3 (2-259)||(24695005-24695263)
chr3 (2-350)||(1417330-1417682)
chr3 (2-259)||(47923743-47924005)
chr3 (2-322)||(16264273-16264596)
chr3 (39-349)||(29100065-29100371)
chr3 (2-344)||(35925385-35925725)
chr3 (2-238)||(27974791-27975029)
chr3 (2-259)||(37466279-37466542)
chr3 (6-206)||(21353604-21353806)
chr3 (2-236)||(27452970-27453207)
chr3 (2-131)||(25929235-25929365)
chr3 (2-234)||(32143335-32143570)
chr3 (2-159)||(47649658-47649817)
chr3 (4-188)||(5366164-5366351)
chr3 (164-272)||(27986449-27986562)
chr3 (164-236)||(33386669-33386741)
chr3 (2-82)||(39032393-39032472)
chr3 (6-188)||(21156489-21156672)
chr3 (184-238)||(38210569-38210623)
chr3 (72-160)||(25517070-25517159)
chr3 (123-226)||(40372766-40372870)
chr3 (2-226)||(1305970-1306197)
chr3 (135-284)||(8477325-8477476)
chr3 (123-226)||(26928561-26928666)
chr3 (2-73)||(27986295-27986365)
chr3 (2-73)||(33386514-33386584)
chr3 (101-176)||(32891116-32891193)
chr3 (149-226)||(2671585-2671661)
chr3 (149-226)||(7167266-7167342)
chr3 (149-226)||(8739062-8739138)
chr3 (149-226)||(9091300-9091376)
chr3 (184-238)||(6063450-6063504)
chr3 (101-176)||(22835081-22835157)
chr3 (101-176)||(29196465-29196542)
chr3 (101-176)||(29682372-29682448)
chr3 (101-176)||(46860487-46860563)
chr3 (184-238)||(50494198-50494252)
chr3 (110-176)||(5433955-5434023)
chr3 (122-176)||(23391988-23392044)
chr3 (122-176)||(32744515-32744571)
chr3 (123-176)||(46173391-46173446)
chr3 (124-176)||(760882-760936)
chr3 (2-45)||(26928438-26928481)
chr3 (164-317)||(39039995-39040151)
chr3 (184-238)||(458483-458537)
chr3 (184-238)||(4103900-4103954)
chr3 (103-160)||(6716514-6716572)
chr3 (184-238)||(10621534-10621588)
chr3 (101-176)||(23410408-23410484)
chr3 (101-176)||(37408471-37408547)
chr3 (184-238)||(53894061-53894115)
chr3 (103-160)||(54635139-54635197)
chr3 (102-176)||(5258223-5258298)
chr3 (102-176)||(5260402-5260477)
chr3 (122-176)||(9581315-9581371)
chr3 (190-238)||(10595040-10595089)
chr3 (123-176)||(5236535-5236590)
chr3 (94-173)||(5797215-5797294)
chr3 (110-159)||(9666562-9666613)
chr3 (123-176)||(19683968-19684023)
chr3 (184-232)||(28413042-28413090)
chr3 (123-176)||(29810902-29810957)
chr3 (123-176)||(30236159-30236214)
chr3 (123-176)||(34491246-34491301)
chr3 (2-50)||(37725874-37725922)
chr3 (123-176)||(45095197-45095252)
chr3 (190-238)||(53917668-53917716)
chr3 (123-176)||(54593738-54593793)
[»] scaffold0078 (2 HSPs)
scaffold0078 (3-325)||(23450-23778)
scaffold0078 (247-316)||(43195-43264)
[»] chr8 (68 HSPs)
chr8 (2-291)||(3051071-3051367)
chr8 (2-342)||(28307466-28307809)
chr8 (3-348)||(19752245-19752594)
chr8 (3-346)||(5702331-5702682)
chr8 (2-343)||(26403079-26403423)
chr8 (2-344)||(23799426-23799772)
chr8 (2-349)||(5990411-5990761)
chr8 (2-348)||(4696458-4696797)
chr8 (2-235)||(6127234-6127470)
chr8 (64-233)||(9054749-9054919)
chr8 (88-344)||(6813583-6813845)
chr8 (2-190)||(7493023-7493212)
chr8 (2-238)||(7412351-7412587)
chr8 (2-238)||(4456038-4456275)
chr8 (184-348)||(9765852-9766021)
chr8 (123-234)||(31071200-31071312)
chr8 (2-234)||(19175604-19175837)
chr8 (135-226)||(1261938-1262029)
chr8 (102-170)||(1822305-1822375)
chr8 (102-170)||(1856750-1856820)
chr8 (3-106)||(13204634-13204737)
chr8 (101-176)||(30291619-30291696)
chr8 (149-226)||(4760074-4760150)
chr8 (4-135)||(31513185-31513314)
chr8 (149-227)||(18870560-18870638)
chr8 (149-226)||(18853166-18853243)
chr8 (149-226)||(36979399-36979475)
chr8 (64-173)||(8863537-8863646)
chr8 (123-176)||(18141854-18141909)
chr8 (2-45)||(26288096-26288139)
chr8 (2-45)||(26301353-26301396)
chr8 (2-45)||(26313347-26313390)
chr8 (2-45)||(31071077-31071120)
chr8 (2-56)||(9054270-9054324)
chr8 (200-234)||(19491709-19491743)
chr8 (184-238)||(43079877-43079931)
chr8 (184-238)||(43082248-43082302)
chr8 (149-226)||(10689142-10689218)
chr8 (149-226)||(30655668-30655744)
chr8 (110-159)||(42093139-42093188)
chr8 (123-176)||(9765779-9765834)
chr8 (124-192)||(11771997-11772065)
chr8 (123-176)||(18655434-18655489)
chr8 (184-232)||(24873193-24873241)
chr8 (123-176)||(27811312-27811367)
chr8 (123-176)||(30143374-30143429)
chr8 (64-173)||(34477134-34477241)
chr8 (123-176)||(42435070-42435125)
chr8 (2-45)||(1261802-1261845)
chr8 (101-176)||(1292542-1292618)
chr8 (184-234)||(18813156-18813206)
chr8 (101-176)||(19491778-19491854)
chr8 (164-226)||(26287923-26287985)
chr8 (164-226)||(26301180-26301242)
chr8 (164-226)||(26313174-26313236)
chr8 (184-238)||(28251573-28251627)
chr8 (184-238)||(44721118-44721172)
chr8 (123-177)||(1746296-1746352)
chr8 (101-159)||(10929812-10929871)
chr8 (149-226)||(33037806-33037881)
chr8 (145-240)||(33079689-33079786)
chr8 (123-176)||(4283558-4283613)
chr8 (123-176)||(15212820-15212875)
chr8 (101-160)||(25689968-25690027)
chr8 (123-176)||(31218291-31218346)
chr8 (184-240)||(32339584-32339640)
chr8 (73-168)||(37021017-37021113)
chr8 (123-176)||(40221779-40221834)
[»] scaffold0148 (1 HSPs)
scaffold0148 (2-344)||(10631-10978)
[»] scaffold0006 (3 HSPs)
scaffold0006 (2-344)||(5586-5932)
scaffold0006 (2-348)||(2388-2741)
scaffold0006 (2-238)||(133129-133367)
[»] scaffold0176 (1 HSPs)
scaffold0176 (48-325)||(17184-17463)
[»] scaffold0140 (3 HSPs)
scaffold0140 (2-238)||(8267-8506)
scaffold0140 (184-238)||(22343-22397)
scaffold0140 (184-238)||(24618-24672)
[»] scaffold0087 (2 HSPs)
scaffold0087 (2-238)||(43811-44048)
scaffold0087 (2-238)||(36682-36919)
[»] scaffold0036 (1 HSPs)
scaffold0036 (2-348)||(85581-85930)
[»] scaffold0002 (2 HSPs)
scaffold0002 (64-229)||(14702-14869)
scaffold0002 (101-176)||(434546-434622)
[»] scaffold0016 (1 HSPs)
scaffold0016 (38-173)||(102380-102516)
[»] scaffold0076 (1 HSPs)
scaffold0076 (113-341)||(15950-16181)
[»] scaffold0188 (4 HSPs)
scaffold0188 (110-284)||(24003-24179)
scaffold0188 (110-226)||(17910-18027)
scaffold0188 (2-45)||(17800-17843)
scaffold0188 (2-45)||(23893-23936)
[»] scaffold0184 (1 HSPs)
scaffold0184 (247-316)||(29580-29649)
[»] scaffold0098 (2 HSPs)
scaffold0098 (2-73)||(45375-45445)
scaffold0098 (184-235)||(45266-45317)
[»] scaffold0267 (1 HSPs)
scaffold0267 (184-238)||(269-323)
[»] scaffold0466 (1 HSPs)
scaffold0466 (123-176)||(7361-7416)
[»] scaffold1519 (1 HSPs)
scaffold1519 (102-177)||(930-1006)
[»] scaffold0154 (1 HSPs)
scaffold0154 (184-238)||(11479-11533)
[»] scaffold0025 (1 HSPs)
scaffold0025 (184-238)||(69298-69352)
[»] scaffold0135 (1 HSPs)
scaffold0135 (184-240)||(35083-35138)


Alignment Details
Target: chr4 (Bit Score: 316; Significance: 1e-178; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 2 - 344
Target Start/End: Original strand, 1983150 - 1983493
Alignment:
Q  2 cattgtaaacaccctggttagtgagattt-caccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgactt 100  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  1983150 cattgtaaacaccctggttagtaagattttcaccattggaaggataaaaaagcttccttttgggttttctcttaggattcattgagagtgtaggtgactt 1983249  T
Q  101 gaaaaaggatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgct 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  1983250 gaaaaaggatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctagtggattggagagctgct 1983349  T
Q  201 atctcccccatagtaggtcatattggaccgaactgggttaccatattggtgtgtttgttttctttcttgctttcttatcttgttgttttgattatgtttg 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  1983350 atctcccccatagtaggtcatattggaccgaactgggttaccatattggtgtgtttgttttctttcttgctttcttatattgttgttttgattatgtttg 1983449  T
Q  301 tggtgatgctttacacttagatttaagtcagtttgttgttgttg 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  1983450 tggtgatgctttacacttagatttaagtcagtttgttgttgttg 1983493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 2 - 296
Target Start/End: Original strand, 39774155 - 39774451
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    ||||||||||||| ||| ||||||| |||||||||||||| ||| |||||||||| |||||  ||||||||| |||||||||||||||||| ||||| ||    
T  39774155 cattgtaaacaccttgggtagtgagttttcaccattggaatgatcaaaaagcttccttttgtattttctcttgggattcattgagagtgtgagtgacatg 39774254  T
Q  102 aaaaaggatagaaattatgttttgtt-ctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgct 200  Q
    ||||  | ||||||||| || ||||| ||||||||||||  |||||||||||||||||||  ||||||||||||| ||  || |||||||||||||||||    
T  39774255 aaaattggtagaaattaggtcttgtttctttgtgagcttttaagctaatttcttgtaacctatttgtatcactttcattttagtggattggagagctgct 39774354  T
Q  201 atctcccccatagtaggtcatattggaccgaactgggttaccatattg-gtgtgtttgttttctttcttgctttcttatcttgttgttttgattatg 296  Q
     | ||||||| |||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  39774355 ctatcccccagagtaggtcatattggaccgaactgagttaccatcttgtgtgtgtttgttttctttcttgctatcttatcttgttgttttgattatg 39774451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 2 - 292
Target Start/End: Complemental strand, 5112484 - 5112193
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||||||||| ||||  ||||||||||||||||||||| ||||||| |||||||     
T  5112484 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttatgttttctcttaggattcattgtgagtgtgagtgactta 5112385  T
Q  102 aaaaag-gatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgct 200  Q
    |||||  | || |||||| || | ||| ||| |||| ||  |||||||||||||||||||| |||||| |||||| ||  || |||||||||||||||||    
T  5112384 aaaaataggtacaaattaggtctcgttttttatgagtttttaagctaatttcttgtaacccatttgtaacactttcatattagtggattggagagctgct 5112285  T
Q  201 atctcccccatagtaggtcatattggaccgaactgggttaccatattggtgtgtttgttttctttcttgctttcttatcttgttgttttgat 292  Q
     || |||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||| |||||| ||||||    
T  5112284 ctcacccccaaagtagatcatattggaccgaactgggttaccatcttggtgtgtttgttttctttcgtactttcttatattgttgctttgat 5112193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 2 - 344
Target Start/End: Complemental strand, 18377606 - 18377274
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    |||||||||| || ||| || |||||||| |||||||||||||| |||||||||| ||||| ||||| |||||||||||||||  |||||||||||| ||    
T  18377606 cattgtaaaccccttgggtaatgagattttaccattggaaggatcaaaaagcttcattttgtgttttttcttaggattcattgtaagtgtgggtgacatg 18377507  T
Q  102 aaaaaggatagaaattatgttttgtt-ctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgct 200  Q
    |||| || ||||||||| |  ||||| ||||||||||||  ||||| ||||||| |||||| ||||||||||||| ||| || |||| ||||| ||||||    
T  18377506 aaaatgggtagaaattagggcttgtttctttgtgagcttttaagctgatttcttataacccatttgtatcactttcatcttagtggaatggagggctgct 18377407  T
Q  201 atctcccccatagtaggtcatattggaccgaactgggttaccatattggtgtgtttgttttctttcttgctttcttatcttgttgttttgattatgtttg 300  Q
     ||||| ||| |||||||||||| | || ||||||||||||||| |||||||||||||||||||  ||           |||||| |||||||||| |||    
T  18377406 ctctcctccagagtaggtcatatagaactgaactgggttaccatcttggtgtgtttgttttcttattt-----------ttgttgctttgattatgcttg 18377318  T
Q  301 tggtgatgctttacacttagatttaagtcagtttgttgttgttg 344  Q
    |||| ||||||||||||||| |||| | | ||||||||||||||    
T  18377317 tggttatgctttacacttagttttaggactgtttgttgttgttg 18377274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 2 - 322
Target Start/End: Complemental strand, 10047628 - 10047303
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcatt---gagagtgtgggtgac 98  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| ||||| |||| ||||| ||||| ||||||||||||||   |||||||||||||||    
T  10047628 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaaacttccttttgtgttttgtcttaggattcattattgagagtgtgggtgac 10047529  T
Q  99 ttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagct 197  Q
       |||| || ||||||||| || |||||||| ||| |||||  |||||||||||||||||| | |||||| |||||| ||| || |||||||||| |||    
T  10047528 ac-aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggct 10047430  T
Q  198 gctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgatta 294  Q
    ||| ||||||||| | |||||||||||||||||||||||||  || || |||||||||||| || ||||||| | ||  ||||| || ||| ||||||||    
T  10047429 gctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttg-ttcctttctttcattgtttatctttattgctttgatta 10047331  T
Q  295 tgtttgtggtgatgctttacacttagat 322  Q
    || |||||||| |||| |||||||||||    
T  10047330 tgcttgtggtgttgctctacacttagat 10047303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 2 - 344
Target Start/End: Complemental strand, 24334058 - 24333714
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattc--attgagagtgtgggtgact 99  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||  |||| ||| |||| ||||     
T  24334058 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcatattgtgagagtggctgac- 24333960  T
Q  100 tgaaaaaggatagaaattatgttttgttctttgtg--agcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagct 197  Q
      |||| || ||||||||| ||||| ||  |||||  |||||| |||||||||| || |||| | |||||| ||| || ||| || ||||||||||||||    
T  24333959 acaaaatgggtagaaattaggttttttttcttgtgtaagcttgtaagctaattttttataactcttttgtaacacgttcatcatagtggattggagagct 24333860  T
Q  198 gctatctcccccatagtaggtcatattggaccgaactgggtt-accatattggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgatta 294  Q
    ||| ||||||||| | |||||||||||||||||||||| ||| || || |||||||||||| |||||||||| | || |||||| || ||| ||||||||    
T  24333859 gctctctcccccaaattaggtcatattggaccgaactgagttaacaatcttggtgtgtttg-tttctttctttcattgcttatctttattgctttgatta 24333761  T
Q  295 tgtttgtggtgatgctttacacttagatttaagtcagtttgttgttgttg 344  Q
    || ||   ||| |||| ||||||||||| || ||| |||| |||||||||    
T  24333760 tgctt---gtgttgctctacacttagatctaggtctgttttttgttgttg 24333714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 3 - 348
Target Start/End: Original strand, 38152289 - 38152641
Alignment:
Q  3 attgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcatt---gagagtgtgggtgact 99  Q
    |||||||||||| ||| |||||| | ||||||||||||||||| |||| |||||  |||| ||||||||||||||||||||   |||||||||||||||     
T  38152289 attgtaaacaccttgggtagtgacaattcaccattggaaggatcaaaa-gcttccatttgtgttttctcttaggattcattattgagagtgtgggtgaca 38152387  T
Q  100 tgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctg 198  Q
      |||  || ||||||||| || |||||||| ||| |||||  ||||||||||||| |||| | |||||| |||||| | | || |||||||||||||||    
T  38152388 caaaattgg-tagaaattaggtcttgttcttgtgtaagcttataagctaatttcttataactcttttgtaacactttcaccatagtggattggagagctg 38152486  T
Q  199 ctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatcttgttgttttgattatg 296  Q
    || ||||||||| | || ||||||||||||||||||||||  || || |||||||||||| || ||||||| | || ||||||||  || ||||||||||    
T  38152487 ctctctcccccagattatgtcatattggaccgaactgggtcaacaatcttggtgtgtttg-ttcctttctttcattgcttatctttgtgctttgattatg 38152585  T
Q  297 tttgtggtgatgctttacacttagatttaagtcagt----ttgttgttgttgcttg 348  Q
     |||||||| |||| ||||||||||| || ||| ||    ||||||||||||||||    
T  38152586 cttgtggtgttgctatacacttagatctaggtctgttttattgttgttgttgcttg 38152641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 4 - 344
Target Start/End: Complemental strand, 37782108 - 37781765
Alignment:
Q  4 ttgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattga-gagtgtgggtgacttga 102  Q
    ||||||||||| ||| |||||||||||||  |||||||| || ||||||  |||||| | ||||||||||| |||||||| | |||||| ||||||||||    
T  37782108 ttgtaaacaccttgggtagtgagatttcattattggaagaatcaaaaagtctcttttagtgttttctcttaagattcatttacgagtgtaggtgacttga 37782009  T
Q  103 aaaa-ggatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgcta 201  Q
    |||| || ||||||||| | ||||||||||||||| ||  ||||||||||||||||||| |||||||||||||| ||  || |||||||||||| | ||     
T  37782008 aaaatgggtagaaattaagatttgttctttgtgagtttttaagctaatttcttgtaacctctttgtatcacttttattatagtggattggagagttactc 37781909  T
Q  202 tctcccccatagtaggtcata-ttggaccgaactgggt-taccatattggtgtgtttgttttctttcttgctttcttatc-ttgttgttttgattatgtt 298  Q
    |||| || | ||||||||||| ||  ||||||||||||  || |||||||| || ||||||||||   |  ||||||||| |||||| ||||| |||| |    
T  37781908 tctctccga-agtaggtcatatttaaaccgaactgggtaaacaatattggtttg-ttgttttcttctattatttcttatctttgttgctttgaatatgct 37781811  T
Q  299 tgtggtgatgctttacacttagatttaagtcagtttgttgttgttg 344  Q
    ||||||| ||||| |||||||||| || |||  ||||||| |||||    
T  37781810 tgtggtgttgcttcacacttagatctaggtctatttgttgatgttg 37781765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 2 - 325
Target Start/End: Original strand, 6743265 - 6743591
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattc---attgagagtgtgggtgac 98  Q
    ||||||||||||| ||| || ||||||||||||||||||||||| ||||| |||| ||||| |||||||||||||||||   ||||||||||||||||||    
T  6743265 cattgtaaacaccttgggtaatgagatttcaccattggaaggatcaaaaa-cttccttttgtgttttctcttaggattcattattgagagtgtgggtgac 6743363  T
Q  99 ttgaaaaaggatagaaattatgttttgttc-tttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagct 197  Q
       |||| || ||||||||| || |||||| ||||| ||| |  |||||||||| ||||| | | |||||| |||||| ||| || |||||||||| |||    
T  6743364 -acaaaatgggtagaaattaggtcttgttcttttgtaagc-tataagctaattttttgtagctcttttgtaacactttcatcatagtggattggagggct 6743461  T
Q  198 gctatctcccccatagtaggtcatattggaccgaactgggttaccatattggtgtgtttgttttctttcttgc-tttcttatct-tgt-tgttttgatta 294  Q
    ||| ||||||  | | ||||||||||||||||||||||||| | ||| |||||||||||| || ||||||| | |||||||||| | | || ||||||||    
T  6743462 gctctctcccgtagattaggtcatattggaccgaactgggtcaacatcttggtgtgtttg-ttcctttcttccatttcttatctctatatgctttgatta 6743560  T
Q  295 tgtttgtggtgatgctttacacttagattta 325  Q
    || |||||||| |||| |||||| |||||||    
T  6743561 tgcttgtggtgttgctctacactcagattta 6743591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 150 - 344
Target Start/End: Original strand, 34495822 - 34496017
Alignment:
Q  150 ttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggttaccatattgg 249  Q
    |||||||||||| ||||||||||||| ||| || |||||||||| |||||| ||||||||| |||| ||||| |||||||||||| ||||||||| ||||    
T  34495822 ttcttgtaacccatttgtatcactttcatcttagtggattggagggctgctctctcccccagagtaagtcatgttggaccgaactaggttaccatcttgg 34495921  T
Q  250 tgtgtttgttttctttcttgc-tttcttatcttgttgttttgattatgtttgtggtgatgctttacacttagatttaagtcagtttgttgttgttg 344  Q
    ||||||||||||||||||| | || ||| | || ||| |||||||||| ||||| ||||||||||||||||| |||  | | ||||||||||||||    
T  34495922 tgtgtttgttttctttctttcattgcttgttttattgctttgattatgcttgtgttgatgctttacacttagttttgggactgtttgttgttgttg 34496017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 2 - 322
Target Start/End: Original strand, 42599424 - 42599747
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    |||| |||||||| ||| |||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||| |||||||       
T  42599424 cattctaaacaccttgggtagtgagatttcaccattggaaggataaaaaaacttccttttgtgttttctcttaggattcattgagagtgcgggtgac-ac 42599522  T
Q  102 aaaaaggatagaaattatgttttgttc-tttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctg-- 198  Q
    |||| || ||||||||| || |||||| ||||| |||||  ||||||||||||||||| | | ||||| || ||| ||| || |||||||||| | ||      
T  42599523 aaaatgggtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaa-ctcattgtaacattttcatcttagtggattggagggttgct 42599621  T
Q  199 ctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgattat 295  Q
    || ||||||||||| || |||||||||||| ||| |||||  || || |||||||||||| || ||||||| | || |||||| || ||| |||||||||    
T  42599622 ctctctcccccatattatgtcatattggactgaattgggtcaacaatcttggtgtgtttg-ttcctttctttcattgcttatctttattgctttgattat 42599720  T
Q  296 gtttgtggtgatgctttacacttagat 322  Q
    | |||||||| |||| |||| ||||||    
T  42599721 gcttgtggtgttgctctacatttagat 42599747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 2 - 259
Target Start/End: Original strand, 16623143 - 16623402
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcat--tgagagtgtgggtgact 99  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||| ||||| ||||| ||||||| |||||||||||  || ||| |||||||||     
T  16623143 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaa-gcttccttttgtgttttcttttaggattcatattgtgagagtgggtgaca 16623241  T
Q  100 tgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctg 198  Q
      |||| || ||||||||| || |||||||| ||| |||||   ||||||||||||||||| | |||||| |||||| ||| || |||||||||||||||    
T  16623242 c-aaaatgggtagaaattaggtcttgttcttctgtaagcttattagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctg 16623340  T
Q  199 ctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgtt 259  Q
    || ||||| ||| | |||||||||||| ||||||||||||  || || ||||||||||||||    
T  16623341 ctctctcctccagattaggtcatattgaaccgaactgggtcaacaatcttggtgtgtttgtt 16623402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 2 - 348
Target Start/End: Complemental strand, 5147925 - 5147573
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctctt-aggattcat--tgagagtgtgggtgac 98  Q
    ||||||||||||  ||| || ||||||||||||||||||||||| | || ||||| ||||| |||||||||| ||| |||||  || |||  ||||||||    
T  5147925 cattgtaaacacattggataatgagatttcaccattggaaggatcataa-gcttccttttgtgttttctctttagggttcatattgtgagaatgggtgac 5147827  T
Q  99 ttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagct 197  Q
       |||| || ||||||||| |  |||||||| ||| ||||||||||||| |||||||||||   |||||| |||||| ||| ||||||| |||||||||    
T  5147826 ac-aaaatgggtagaaattaggccttgttcttgtgtaagcttgcaagctattttcttgtaactattttgtaacactttcatcataatggactggagagct 5147728  T
Q  198 gctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatct-tgttgttttgatta 294  Q
    |||  |||||||| | |||||||||||||||||||||||||  || || | |||||||||| || ||||||| | || ||||||| | ||||||||||||    
T  5147727 gctccctcccccaaattaggtcatattggaccgaactgggtcaacaatctcggtgtgtttg-ttcctttctttcattgcttatctctattgttttgatta 5147629  T
Q  295 tgtttgtggtgatgctttacacttagatttaagtcagt--ttgttgttgttgcttg 348  Q
    ||||||||||| |||| |||||||||||||| ||| ||  ||||||||||| ||||    
T  5147628 tgtttgtggtgttgctctacacttagatttaggtctgttattgttgttgtttcttg 5147573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 2 - 348
Target Start/End: Original strand, 25861883 - 25862223
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttg-ggttttctcttaggattcattgagagtgtgggtgactt 100  Q
    ||||||||||||| ||  |||||||||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||||||||||||||||      
T  25861883 cattgtaaacaccttgagtagtgagatttcaccattggaaggatcaaaaaacttccttttgtgtttttctcttaggattcattgagagtgtgggtgac-a 25861981  T
Q  101 gaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgc 199  Q
     |||| || ||| ||||| || |||||||| ||| |||||  |||||||||||||||||           |||||| ||| || |||||||||| || ||    
T  25861982 caaaatgggtaggaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaa-----------cactttcatcatagtggattggagggccgc 25862070  T
Q  200 tatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgattatg 296  Q
    | ||| ||||||| |||||||||||||||||||||| ||  || || |||||||||||  || ||||||| | || |||||| || ||| ||||||||||    
T  25862071 tctcttccccatattaggtcatattggaccgaactgagtcaacaatcttggtgtgttt-attcctttctttcattgcttatctttattgctttgattatg 25862169  T
Q  297 tttgtggtgatgctttacacttagatttaagtcag--tttgttgttgttgcttg 348  Q
     |||||||| |||| |||||||||||||| ||| |  |||||||||||||||||    
T  25862170 cttgtggtgttgctctacacttagatttaggtctgtttttgttgttgttgcttg 25862223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 2 - 348
Target Start/End: Complemental strand, 3777796 - 3777446
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattc--attgagagtgtgggtgact 99  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||| |||||||||| |||||  ||||||||||||||||  |||| ||| |||||||||     
T  3777796 cattgtaaacaccttgggtagtgagatttcaccattggaatgatcaaaaagcttccttttgtattttctcttaggattcatattgtgagagtgggtgac- 3777698  T
Q  100 tgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctg 198  Q
      |||| || |||||||||  | |||||||| ||| || |||||||||| |||||||||| | ||||||| |||||| ||| || ||||||||||||||     
T  3777697 acaaaatgggtagaaattagatcttgttcttgtgtaagtttgcaagctattttcttgtaa-ctctttgtaacactttcatcatagtggattggagagcta 3777599  T
Q  199 ctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatcttgttgttttgattatg 296  Q
    || ||||| | | | ||||| |||||||||||||||||||  || || | |||||||||| || ||||||| | || ||||||||  || ||||||||||    
T  3777598 ctctctcctctagattaggttatattggaccgaactgggtcaacaatctcggtgtgtttg-ttcctttctttcattgcttatctttgtgctttgattatg 3777500  T
Q  297 tttgtggtgatgctttacacttagatttaagtcag--tttgttgttgttgcttg 348  Q
     |||||||  || | ||||||||||| || ||| |  |||||||||||||||||    
T  3777499 cttgtggttttgttctacacttagatctaggtctgtttttgttgttgttgcttg 3777446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 2 - 322
Target Start/End: Original strand, 5269050 - 5269364
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattc---attgagagtgtgggtgac 98  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||   ||||||||||||||||||    
T  5269050 cattgtaaacaccttggatagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcattattgagagtgtgggtgac 5269149  T
Q  99 ttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagct 197  Q
       | || || ||||||||| || |||||||| ||| |||||  |||||||||||||||||           |||||| ||| || |||||||||| |||    
T  5269150 -acacaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaa-----------cactttcatcatagtggattggagggct 5269237  T
Q  198 gctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttat-cttgttgttttgatta 294  Q
    ||| ||||||||| | ||||||||||||||||||||| |||  || || ||| |||||||| || ||||||| | ||||||||  || ||| ||||||||    
T  5269238 gctctctcccccagattaggtcatattggaccgaactaggtcaacaatcttgttgtgtttg-ttcctttctttcatttcttatatttattgctttgatta 5269336  T
Q  295 tgtttgtggtgatgctttacacttagat 322  Q
    || |||||||| |||| |||||||||||    
T  5269337 tgcttgtggtgttgctctacacttagat 5269364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 64 - 236
Target Start/End: Original strand, 34670577 - 34670747
Alignment:
Q  64 gttttctcttaggattcattgagagtgtgggtgacttgaaaaa-ggatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccc 162  Q
    ||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||| |||||||||||||||||   ||||||||||||||||||| |    
T  34670577 gttttctcttaggattcattgtgagtgtgagtgacttgaaaaatggatagaaattatgatttgttctttgtgagctattaagctaatttcttgtaacctc 34670676  T
Q  163 tttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattggaccgaactgg 236  Q
    |||||| | |||  ||| || |||||  ||||||||||||||||  ||||||||||||| ||||||||||||||    
T  34670677 tttgta-ccctt--atcatagtggatcagagagctgctatctccttcatagtaggtcattttggaccgaactgg 34670747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 2 - 259
Target Start/End: Original strand, 36315080 - 36315338
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcatt---gagagtgtgggtgac 98  Q
    ||||||||||||  ||| ||||||||||| |||||||||||||| |||| ||||| ||||| ||||| || |||||||||||   |||||||||||| ||    
T  36315080 cattgtaaacacattgggtagtgagatttaaccattggaaggatcaaaa-gcttccttttgtgttttttcgtaggattcattattgagagtgtgggtaac 36315178  T
Q  99 ttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagct 197  Q
        ||| || ||||||||| || ||| |||| ||| |||||  |||||||||||||||||| | |||||| |||||| ||| || ||||||||||||||    
T  36315179 ac--aaatgggtagaaattaggtcttgctcttgtgtaagcttctaagctaatttcttgtaactc-tttgtaacactttcatcatagtggattggagagct 36315275  T
Q  198 gctatctcccccatagtaggtcatattggaccgaactgggttacca-tattggtgtgtttgtt 259  Q
    ||| ||||||||| | ||||||||||||||||||||||||| | || | ||||||||||||||    
T  36315276 gctctctcccccagattaggtcatattggaccgaactgggtcaacattcttggtgtgtttgtt 36315338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 2 - 259
Target Start/End: Original strand, 36329289 - 36329547
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcatt---gagagtgtgggtgac 98  Q
    ||||||||||||  ||| ||||||||||| |||||||||||||| |||| ||||| ||||| ||||| || |||||||||||   |||||||||||| ||    
T  36329289 cattgtaaacacattgggtagtgagatttaaccattggaaggatcaaaa-gcttccttttgtgttttttcgtaggattcattattgagagtgtgggtaac 36329387  T
Q  99 ttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagct 197  Q
        ||| || ||||||||| || ||| |||| ||| |||||  |||||||||||||||||| | |||||| |||||| ||| || ||||||||||||||    
T  36329388 ac--aaatgggtagaaattaggtcttgctcttgtgtaagcttctaagctaatttcttgtaactc-tttgtaacactttcatcatagtggattggagagct 36329484  T
Q  198 gctatctcccccatagtaggtcatattggaccgaactgggttacca-tattggtgtgtttgtt 259  Q
    ||| ||||||||| | ||||||||||||||||||||||||| | || | ||||||||||||||    
T  36329485 gctctctcccccagattaggtcatattggaccgaactgggtcaacattcttggtgtgtttgtt 36329547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 4 - 348
Target Start/End: Complemental strand, 54867427 - 54867078
Alignment:
Q  4 ttgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttc--tttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    ||||||||||  ||| |||||||||||||||||||||||||| |||||||||   |||||| |||||||||||||||||||||||  ||||| ||||       
T  54867427 ttgtaaacactatgggtagtgagatttcaccattggaaggatcaaaaagctttcttttttgtgttttctcttaggattcattgag--tgtggatgacac- 54867331  T
Q  102 aaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgct 200  Q
    |||| || ||||||||| || |||||||| ||| |||||  ||||||||||||| ||||   |||||| || ||| ||| || | ||||| || ||||||    
T  54867330 aaaatgggtagaaattaggtattgttcttgtgtaagcttataagctaatttcttataactattttgtaacattttcatcatagttgattgaagggctgct 54867231  T
Q  201 atctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgattatgt 297  Q
     ||||||| | | |||||||||||||||||||||||||  || || |||||||||||| || ||||||| | || |||||| || ||  ||||||||||     
T  54867230 ctctcccc-agactaggtcatattggaccgaactgggtcaacaatcttggtgtgtttg-ttcctttctttcattgcttatctttattactttgattatgc 54867133  T
Q  298 ttgtggtgatgctttacacttagatttaagtcag----tttgttgttgttgcttg 348  Q
    |||||||| |||| ||||||||||| || ||| |    |||||||||||||||||    
T  54867132 ttgtggtgttgctctacacttagatctatgtctgtttttttgttgttgttgcttg 54867078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 148 - 344
Target Start/End: Complemental strand, 39246094 - 39245896
Alignment:
Q  148 atttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt-taccatat 246  Q
    |||||||||||| | |||||| |||||| ||| || |||||||||| |||||| ||||||||| | |||||||||||||||||||||||||  || || |    
T  39246094 atttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatct 39245995  T
Q  247 tggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgattatgtttgtggtgatgctttacacttagatttaagtcagtttgttgttgttg 344  Q
    ||||||||||| || ||||||| | || |||||| || ||||||||||||||  ||||||| |||| |||||||||||||| ||| |||| |||||||||    
T  39245994 tggtgtgtttg-ttcctttctttcattgcttatctttattgttttgattatgcctgtggtgttgctctacacttagatttaggtctgttttttgttgttg 39245896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 4 - 344
Target Start/End: Complemental strand, 5143505 - 5143162
Alignment:
Q  4 ttgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctctt-aggattcat--tgagagtgtgggtgactt 100  Q
    ||||||||||| | | |||||||||||||||||||||||||| | || ||||| ||||| |||||||||| ||| |||||  |  ||| |||| ||||      
T  5143505 ttgtaaacaccttaggtagtgagatttcaccattggaaggatcataa-gcttccttttgtgttttctctttagggttcatattctgagagtggctgacac 5143407  T
Q  101 gaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgc 199  Q
     |||| |  ||||||||| || |||||||| |||  |||||||||||| ||||||||||    |||||| |||||| ||| || ||| ||||||||||||    
T  5143406 -aaaatgagtagaaattaggtcttgttcttgtgtatgcttgcaagctattttcttgtaaattttttgtaacactttcatcatagtgggttggagagctgc 5143308  T
Q  200 tatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatct-tgttgttttgattatg 296  Q
    | ||||||||| | ||||||||||||||||||||| |||  || || |  ||||||||| || ||||||| | || ||||||| | ||||||||||||||    
T  5143307 tctctcccccagattaggtcatattggaccgaactaggtcaacaatctcagtgtgtttg-ttcctttctttcattgcttatctctattgttttgattatg 5143209  T
Q  297 tttgtggtgatgctttacacttagatttaagtcagtttgttgttgttg 344  Q
    ||||||||| || | |||||||||||||| ||| |||| |||||||||    
T  5143208 tttgtggtgttgttctacacttagatttaggtctgttt-ttgttgttg 5143162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 2 - 238
Target Start/End: Original strand, 5396521 - 5396758
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctctt-aggattcat---tgagagtgtgggtga 97  Q
    ||||||||||||| ||| ||||||||||||||||||||||| || |||| ||||  ||||| || ||||||| ||| |||||   |||||| ||| || |    
T  5396521 cattgtaaacaccttgggtagtgagatttcaccattggaagaatcaaaa-gctttcttttgtgtcttctctttagggttcatcattgagagagtgagtaa 5396619  T
Q  98 cttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagc 196  Q
    |    ||| || ||||||||| || |||||||| ||| ||||||||||||| ||||||||||| | |||| | |||||| ||| || |||||||||||||    
T  5396620 cac--aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgcaacactttcatcatagtggattggagagc 5396716  T
Q  197 tgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||| ||||| ||| | |||||||||||||||||||||||||    
T  5396717 tgctctctcctccagattaggtcatattggaccgaactgggt 5396758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 110 - 238
Target Start/End: Original strand, 3796477 - 3796606
Alignment:
Q  110 tagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccc 208  Q
    ||||||||| || |||||||| ||  |||||| |||||||||||||||||| | |||||| |||||| ||| || |||||| ||||| |||| |||||||    
T  3796477 tagaaattaggtcttgttcttgtgcaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattagagagttgctctctcccc 3796576  T
Q  209 catagtaggtcatattggaccgaactgggt 238  Q
    |||| ||||||||||||||| |||||||||    
T  3796577 catattaggtcatattggacggaactgggt 3796606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 4 - 344
Target Start/End: Original strand, 873370 - 873711
Alignment:
Q  4 ttgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttgaa 103  Q
    ||||||||||| ||  ||||||||| |||  |  || ||||| |||||||||| ||||| ||||||||||| || | | || || ||||||||||| |||    
T  873370 ttgtaaacaccttgagtagtgagatctcattagagggaggatcaaaaagcttcattttgtgttttctcttaagacttaatgtgactgtgggtgactcgaa 873469  T
Q  104 aaagga-tagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctat 202  Q
    | | || ||||||||| | |||||| |||| ||||||  ||| |||||||||||||||  || |||||| | | ||| || ||||| |||||| |||| |    
T  873470 atatgagtagaaattaggatttgttatttgcgagcttttaagttaatttcttgtaacctattggtatcattctaatcatagtggatcggagagttgctct 873569  T
Q  203 ctcccccatagtaggtcatattggaccgaactgggttacca-tattggtgtgtttgttttctt-tcttgctttcttatctt-gttgttttgattatgttt 299  Q
    ||  |  || ||| || || |   ||||||||| || |  | |||||||||||| |||| ||| ||||| ||||||||||| |||||||||| |||||||    
T  873570 ctttctaat-gtatgtaatttaaaaccgaactgagtaaataatattggtgtgtt-gtttccttatcttg-tttcttatcttcgttgttttgaatatgttt 873666  T
Q  300 gtggtgatgctttacacttagatttaagtcagtttgttgttgttg 344  Q
    |||||| || || ||||||||||||||||||||||||||||||||    
T  873667 gtggtgttgtttcacacttagatttaagtcagtttgttgttgttg 873711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 142 - 322
Target Start/End: Original strand, 16630671 - 16630853
Alignment:
Q  142 aagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt-ta 240  Q
    |||||||||||||||||| | |||||| |||||| ||| || ||||||||||||||| | ||||| ||| | || |||||||||||||||||| |||  |    
T  16630671 aagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgttctctcctccagattatgtcatattggaccgaactaggtcaa 16630770  T
Q  241 ccatattggtgtgtttgttttctttcttgc-tttcttatcttgttgttttgattatgtttgtggtgatgctttacacttagat 322  Q
    | |  ||||||||||||||   |||||| | || ||||||||  |  |||||||||| |||||||| ||||||||||||||||    
T  16630771 caaccttggtgtgtttgttccttttctttcattgcttatctttgttctttgattatgcttgtggtgttgctttacacttagat 16630853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 65 - 197
Target Start/End: Original strand, 18912276 - 18912409
Alignment:
Q  65 ttttctcttaggattcattgagagtgtgggtgacttgaaaaa-ggatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccct 163  Q
    |||||||||||||||||||| | || || ||||||||||||| ||||| || ||| | ||||||||||||||| ||| || ||||||||||||| ||  |    
T  18912276 ttttctcttaggattcattgtgggtttgagtgacttgaaaaatggatataatttagggtttgttctttgtgagtttgtaaactaatttcttgtatccttt 18912375  T
Q  164 ttgtatcactttgatcctaatggattggagagct 197  Q
    |||||||||| | ||| || ||||||||||||||    
T  18912376 ttgtatcactcttatcatagtggattggagagct 18912409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 2 - 238
Target Start/End: Original strand, 31985483 - 31985720
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctctt--aggattca--ttgagagtgtgggtga 97  Q
    ||||||||||||| ||| |||||| |||||||||| |||||||| |||| ||||| ||||| || |||||||  ||| ||||  ||| ||| |||||  |    
T  31985483 cattgtaaacaccttgggtagtgaaatttcaccatgggaaggatcaaaa-gcttccttttgtgtcttctcttttagggttcacattgtgagagtgggaaa 31985581  T
Q  98 cttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaattt-cttgtaacccctttgtatcactttgatcctaatggattggagag 195  Q
    |    ||| || ||||||||| |  |||||||| ||| ||||||||||||| ||| |||||||||| |||||| |||||| ||| || ||||||||||||    
T  31985582 cac--aaatgggtagaaattaggacttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagag 31985678  T
Q  196 ctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||||| ||| ||||| | |||||||||||||||||||||||||    
T  31985679 ctgctctct-ccccagattaggtcatattggaccgaactgggt 31985720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 3793930 - 3794010
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcat 82  Q
    ||||||||||||| ||| ||||||||||||||||| | |||||| |||||||||| ||||| |||| ||||||||||||||    
T  3793930 cattgtaaacaccttgggtagtgagatttcaccatagaaaggatcaaaaagcttccttttgtgtttgctcttaggattcat 3794010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 16628722 - 16628801
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcat 82  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||  ||||||||| ||||| ||||||| |||||||||||    
T  16628722 cattgtaaacaccttgggtagtgagatttcaccattggaaggat-caaaagcttccttttgtgttttcttttaggattcat 16628801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 349
Target Start/End: Complemental strand, 4956358 - 4956082
Alignment:
Q  75 ggattcattgagagtgtgggtgacttgaaaaaggatagaaattat------gttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgta 168  Q
    |||||||||| |||||||||||||||||||  || ||||||||||      | |||||||||| |||| ||   |||||||||||||||||| |||| ||    
T  4956358 ggattcattgtgagtgtgggtgacttgaaattgggtagaaattataattagggtttgttctttatgagttttttagctaatttcttgtaacctcttttta 4956259  T
Q  169 tcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggttacca-tattggtgtgtttgttttctttct 267  Q
    ||| | | ||| || |||||||||||| |||| | |       | ||||| || |||||| ||||||| | | || ||||| | ||||| ||||||||||    
T  4956258 tcattcttatcatagtggattggagagttgct-tata------attaggttattttggactgaactggataaacaatattgatttgttt-ttttctttct 4956167  T
Q  268 --tgctttcttatct-tgttgttttgattatgtttgtggtgatgctttacacttagatttaagtcagtttgttgttgttgcttga 349  Q
      || ||| |||||| ||||| ||||||||||||||||||| ||||| ||||||| || ||  || |||||||||||||||||||    
T  4956166 cttgtttttttatctgtgttgctttgattatgtttgtggtgttgcttcacacttaaatctagatccgtttgttgttgttgcttga 4956082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 226
Target Start/End: Complemental strand, 24742038 - 24741962
Alignment:
Q  149 tttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattgg 226  Q
    ||||||||||||| |||||| |||||| ||| || ||||||||||||||||| ||||||||| | |||| ||||||||    
T  24742038 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattgg 24741962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 226
Target Start/End: Complemental strand, 29760739 - 29760663
Alignment:
Q  149 tttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattgg 226  Q
    ||||||||||||| |||||| |||||| ||| || ||||||||||||||||| ||||||||| | |||| ||||||||    
T  29760739 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattgg 29760663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 236
Target Start/End: Original strand, 8689346 - 8689568
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcat---tgagagtgtgggtgac 98  Q
    |||| |||||||| ||| |||||||||||||||||||||||||| |||| | ||| ||||| || |||||||||| |||||   |||||| |||||  ||    
T  8689346 cattttaaacaccttggatagtgagatttcaccattggaaggatcaaaa-gtttccttttgtgtcttctcttagggttcatcattgagagagtgggaaac 8689444  T
Q  99 ttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagct 197  Q
        |||  | ||||||||| || |||||||| ||| ||||||||||||| |||||||||||           ||||| ||| || ||||| ||||||||    
T  8689445 ac--aaattggtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttgtaac-----------actttcatcatagtggataggagagct 8689531  T
Q  198 gctatctcccccatagtaggtcatattggaccgaactgg 236  Q
     ||  |||||||||| ||| |||||||||||||||||||    
T  8689532 cct--ctcccccatattagatcatattggaccgaactgg 8689568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 379393 - 379469
Alignment:
Q  101 gaaaaaggatagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||| || ||||||||| |||| ||||||||||||||||   |||||||||||||||||||| |||||||| |||||    
T  379393 gaaaatgggtagaaattaggttt-gttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatcgctttg 379469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 4587971 - 4588048
Alignment:
Q  101 gaaaaaggatagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    |||||| | ||||||||| | |||||||||||| ||||||   |||||||||||||||||||| |||||||| |||||    
T  4587971 gaaaaaaggtagaaattaagatttgttctttgtaagcttgttgaagctaatttcttgtaacccttttgtatctctttg 4588048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 16931849 - 16931795
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||||||| |||||| ||||||||| | ||||||| |||||||||||||||||    
T  16931849 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggt 16931795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 16934203 - 16934149
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||||||| |||||| ||||||||| | ||||||| |||||||||||||||||    
T  16934203 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggt 16934149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 22780433 - 22780379
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||||||| |||||| ||||||||| | ||||||| |||||||||||||||||    
T  22780433 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggt 22780379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 28468387 - 28468429
Alignment:
Q  3 attgtaaacaccctggttagtgagatttcaccattggaaggat 45  Q
    |||||||||||| ||| ||||||||||||||||||||||||||    
T  28468387 attgtaaacaccttgggtagtgagatttcaccattggaaggat 28468429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 44599898 - 44599844
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||||||| |||||| ||||||||| | ||||||| |||||||||||||||||    
T  44599898 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggt 44599844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 52467509 - 52467433
Alignment:
Q  101 gaaaaaggatagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||| || ||||||||| |||| ||||||||||||||||   |||||||| ||||||||||| ||||||||||||||    
T  52467509 gaaaatgggtagaaattaggttt-gttctttgtgagcttgttgaagctaatatcttgtaacccatttgtatcactttg 52467433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 110 - 176
Target Start/End: Original strand, 12119560 - 12119628
Alignment:
Q  110 tagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||| |||||||||||||| |||    |||||||||||||||||||| |||||||| |||||    
T  12119560 tagaaattatggtttgttctttgtgaactttttgaagctaatttcttgtaacccttttgtatctctttg 12119628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 22782798 - 22782746
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgg 236  Q
    |||||||||| |||||| ||||||||| | ||||||| |||||||||||||||    
T  22782798 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgg 22782746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 27417099 - 27417044
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||||||||   |||||||||||||||||||| |||||||| |||||    
T  27417099 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttg 27417044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 36994558 - 36994613
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||||||||   |||||||||||||||||||| |||||||| |||||    
T  36994558 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatccctttg 36994613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 173
Target Start/End: Complemental strand, 39593910 - 39593803
Alignment:
Q  66 tttctcttaggattcattgagagtgtgggtgacttgaaaaagga-tagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctt 164  Q
    ||||||||||||||||||| | || || ||||||||| |||||  ||||||||| |||   ||||||||||| ||| || |||||||||||||||   ||    
T  39593910 tttctcttaggattcattgtgggtttgagtgacttgacaaaggggtagaaattaggttga-ttctttgtgagtttgtaaactaatttcttgtaacttatt 39593812  T
Q  165 tgtatcact 173  Q
    |||||||||    
T  39593811 tgtatcact 39593803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 50262835 - 50262780
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||||||||   |||||||||||||||||||| |||||||| |||||    
T  50262835 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttg 50262780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 6765117 - 6765171
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||||||| |||||| ||||||||| | |||||||  ||||||||||||||||    
T  6765117 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggt 6765171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 7941596 - 7941650
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||||||| |||||| ||||||||| | |||||||  ||||||||||||||||    
T  7941596 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggt 7941650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 18709224 - 18709170
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||||||||||  ||||| ||||||||| | ||||||| |||||||||||||||||    
T  18709224 tggattggaggactgctctctcccccagactaggtcagattggaccgaactgggt 18709170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 22132452 - 22132398
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||||||| |||||| ||||||| ||| |||||||  ||||||||||||||||    
T  22132452 tggattggagggctgctctctcccctatactaggtcaatttggaccgaactgggt 22132398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 24348491 - 24348545
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||||| |||| |||||| ||||||||||| |||||||  ||||||||||||||||    
T  24348491 tggatcggagggctgctctctcccccatactaggtcaatttggaccgaactgggt 24348545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 28468542 - 28468604
Alignment:
Q  164 ttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattgg 226  Q
    ||||| |||||| ||| || ||||||||||||||||| ||||| ||| | |||||||||||||    
T  28468542 ttgtaacactttcatcatagtggattggagagctgctctctcctccagattaggtcatattgg 28468604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 38409477 - 38409531
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||||| |||| |||||| ||||||||||| |||||||  ||||||||||||||||    
T  38409477 tggatcggagggctgctctctcccccatactaggtcaatttggaccgaactgggt 38409531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 170
Target Start/End: Complemental strand, 45687328 - 45687267
Alignment:
Q  111 agaaattatgttttgttctttgtgagcttg--caagctaatttcttgtaacccctttgtatc 170  Q
    |||||||| |||||||||||||||||||||   ||||||||||||| |||| | ||||||||    
T  45687328 agaaattaggttttgttctttgtgagcttgtcaaagctaatttcttataactcatttgtatc 45687267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 56178792 - 56178716
Alignment:
Q  101 gaaaaaggatagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    |||||||| ||||||||| | || ||||||||||| ||||   |||||||||||||||||||| |||||||| |||||    
T  56178792 gaaaaagggtagaaattagggtt-gttctttgtgaacttgttgaagctaatttcttgtaacccttttgtatctctttg 56178716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 176
Target Start/End: Original strand, 5871853 - 5871909
Alignment:
Q  122 tttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    |||||||||||||||||||   |||| ||||||||||||||| ||| ||||||||||    
T  5871853 tttgttctttgtgagcttgtttaagcaaatttcttgtaacccatttttatcactttg 5871909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 176
Target Start/End: Original strand, 24969145 - 24969201
Alignment:
Q  122 tttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    |||||||||||||||||||   |||||||||||||||||| | |||||||| |||||    
T  24969145 tttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttg 24969201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 176
Target Start/End: Complemental strand, 26699578 - 26699522
Alignment:
Q  122 tttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    |||||||||||||||||||   |||||||||||||||||| | |||||||| |||||    
T  26699578 tttgttctttgtgagcttgttgaagctaatttcttgtaactcttttgtatctctttg 26699522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 8665442 - 8665497
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    |||||||||| |||||||   |||||||||||||||||||| |||||||| |||||    
T  8665442 ttgttctttgagagcttgttgaagctaatttcttgtaacccatttgtatctctttg 8665497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 238
Target Start/End: Original strand, 9148531 - 9148579
Alignment:
Q  190 ggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||| |||||| ||||||||| | ||||||| |||||||||||||||||    
T  9148531 ggagggctgctctctcccccagactaggtcagattggaccgaactgggt 9148579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 240
Target Start/End: Original strand, 9229215 - 9229270
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggtta 240  Q
    ||||||||||||||||| ||||||||| | |||| |||||||| | |||||||||||    
T  9229215 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtta 9229270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 9927592 - 9927537
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||| ||||   |||||||||||||||||||| |||||||| |||||    
T  9927592 ttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttg 9927537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 170
Target Start/End: Complemental strand, 12739705 - 12739635
Alignment:
Q  101 gaaaaaggatagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatc 170  Q
    ||||| |||||||||||| | || ||||||||||| ||||   |||||||||||||||||||| ||||||||    
T  12739705 gaaaatggatagaaattagggtt-gttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatc 12739635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 12744059 - 12744004
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||| ||||   |||||||||||||||||||| |||||||| |||||    
T  12744059 ttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctctttg 12744004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 12744181 - 12744126
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||| ||||   |||||||||||||||||||| |||||||| |||||    
T  12744181 ttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctctttg 12744126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 12745448 - 12745393
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||| ||||   |||||||||||||||||||| |||||||| |||||    
T  12745448 ttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctctttg 12745393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 170
Target Start/End: Complemental strand, 12747911 - 12747841
Alignment:
Q  101 gaaaaaggatagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatc 170  Q
    ||||| |||||||||||| | || ||||||||||| ||||   |||||||||||||||||||| ||||||||    
T  12747911 gaaaatggatagaaattagggtt-gttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatc 12747841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 26175770 - 26175715
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||||||||   || ||||||||||||||||| |||||||| |||||    
T  26175770 ttgttctttgtgagcttgttgaaactaatttcttgtaacccatttgtatctctttg 26175715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 37740659 - 37740714
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||| ||||   |||||||||||||||||||| |||||||| |||||    
T  37740659 ttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttg 37740714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 40632479 - 40632534
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||||||||   |||||||||||||||||||  |||||||| |||||    
T  40632479 ttgttctttgtgagcttgttgaagctaatttcttgtaacctatttgtatctctttg 40632534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 161
Target Start/End: Complemental strand, 48142527 - 48142472
Alignment:
Q  108 gatagaaattatgttttgttctttgtgagcttg--caagctaatttcttgtaaccc 161  Q
    ||||||||||| | |||||||||||||||||||   |||||| |||||||||||||    
T  48142527 gatagaaattagggtttgttctttgtgagcttgttgaagctagtttcttgtaaccc 48142472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 52095496 - 52095441
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||| ||||   |||||||||||||||||||| |||||||| |||||    
T  52095496 ttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctctttg 52095441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 54200040 - 54199985
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||| ||||   |||||||||||||||||||| |||||||| |||||    
T  54200040 ttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttg 54199985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 54883054 - 54883109
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||| ||||||||||||   |||||||||||||||||||| |||||||| |||||    
T  54883054 ttgttttttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttg 54883109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 55085499 - 55085444
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||||||||   ||||||||||||||||| || |||||||| |||||    
T  55085499 ttgttctttgtgagcttgttgaagctaatttcttgtaaaccatttgtatctctttg 55085444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 181; Significance: 1e-97; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 2 - 344
Target Start/End: Complemental strand, 22819678 - 22819331
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggtttt--ctcttaggattcattgagagtgtgggtgact 99  Q
    ||||||||||||| ||| |||| | ||||||||||||||||||| |||||||||| ||||| |||||  |||||||||||||||||||||||||||||||    
T  22819678 cattgtaaacaccttgggtagttacatttcaccattggaaggatcaaaaagcttccttttgtgttttttctcttaggattcattgagagtgtgggtgact 22819579  T
Q  100 tgaaaaa-ggatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctg 198  Q
    ||||||| || |||||||||||| || |||||||||||||   |||||||||||||||||| | ||||||||||||| ||| |  |||||||||| |||     
T  22819578 tgaaaaatggttagaaattatgtcttattctttgtgagctaaaaagctaatttcttgtaactcatttgtatcactttcatcttggtggattggagggcta 22819479  T
Q  199 ctatctccccc-atagtaggtcatattggaccgaactgggttaccatattg-gtgtgtttgttttctttcttgctttcttatcttgttgttttgattatg 296  Q
    || |||||||| | |||||||||||||||||| || ||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22819478 ctctctccccccagagtaggtcatattggaccaaattgggttaccatcttgtgtgtgtttgttttctttcttgctttcttatcttgttgatttgattatg 22819379  T
Q  297 tttgtggtgatgctttacacttagatttaagtcagtttgttgttgttg 344  Q
     ||||||||||| |||||| |||| |||||| | ||||||||||||||    
T  22819378 cttgtggtgatgttttacatttagttttaagactgtttgttgttgttg 22819331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 2 - 344
Target Start/End: Complemental strand, 19073175 - 19072829
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcatt-gagagtgtgggtgactt 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||| |||||| ||||||||| |||||      
T  19073175 cattgtaaacaccttggatagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttagggttcatttgagagtgtgagtgacac 19073076  T
Q  101 gaaaaaggatagaaattatgttttgttcttt-gtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgc 199  Q
     |||| || ||||||||| || ||||||||| || |||||  |||||||||||||||||| | |||||| |||||| ||| || ||||||||||||||||    
T  19073075 -aaaatgggtagaaattaggtattgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcttagtggattggagagctgc 19072977  T
Q  200 tatctcccccatagtaggtcatattggaccgaactgggttacca--tattggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgattat 295  Q
    | ||||||||| | ||||||||||||||||||||||||| | ||    |||||||||||| || ||||||| | || |||||| || |||||||||||||    
T  19072976 tctctcccccagattaggtcatattggaccgaactgggtcaacaatctttggtgtgtttg-ttcctttctttcattgcttatctttattgttttgattat 19072878  T
Q  296 gtttgtggtgatgctttacacttagatttaagtcagtttgttgttgttg 344  Q
    | |||||||| |||| |||||||||||||| ||| | || |||||||||    
T  19072877 gcttgtggtgttgctctacacttagatttaggtctgatttttgttgttg 19072829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 2 - 344
Target Start/End: Complemental strand, 19121065 - 19120719
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcatt-gagagtgtgggtgactt 100  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||| |||||| ||||||||| |||||      
T  19121065 cattgtaaacaccttggatagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttagggttcatttgagagtgtgagtgacac 19120966  T
Q  101 gaaaaaggatagaaattatgttttgttcttt-gtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgc 199  Q
     |||| || ||||||||| || ||||||||| || |||||  |||||||||||||||||| | |||||| |||||| ||| || ||||||||||||||||    
T  19120965 -aaaatgggtagaaattaggtattgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcttagtggattggagagctgc 19120867  T
Q  200 tatctcccccatagtaggtcatattggaccgaactgggttacca--tattggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgattat 295  Q
    | ||||||||| | ||||||||||||||||||||||||| | ||    |||||||||||| || ||||||| | || |||||| || |||||||||||||    
T  19120866 tctctcccccagattaggtcatattggaccgaactgggtcaacaatctttggtgtgtttg-ttcctttctttcattgcttatctttattgttttgattat 19120768  T
Q  296 gtttgtggtgatgctttacacttagatttaagtcagtttgttgttgttg 344  Q
    | |||||||| |||| |||||||||||||| ||| | || |||||||||    
T  19120767 gcttgtggtgttgctctacacttagatttaggtctgatttttgttgttg 19120719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 2 - 348
Target Start/End: Original strand, 47098675 - 47099024
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||||||||| ||||| ||||| ||||||| ||||||||||||||||||||  ||    
T  47098675 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttttcttaggtttcattgagagtgtgggtgatgtg 47098774  T
Q  102 aaaaaggatagaaattatgttttgttc-tttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgct 200  Q
    |||| || ||||||||| |  |||||| ||||| |||||  ||||||||||||||||| | | ||||| |||||| ||| || |||||||||| ||||||    
T  47098775 aaaatgggtagaaattaggacttgttcttttgtaagcttataagctaatttcttgtaa-ctcattgtaacactttcatcttagtggattggagggctgct 47098873  T
Q  201 atctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttc-ttgctttcttatc-ttgttgttttgattatgt 297  Q
     ||||||||| | | |||||||||||||||||||||||  || || |||||||||||| || ||||| ||| || |||||| || ||| |||||||||      
T  47098874 ctctcccccagattcggtcatattggaccgaactgggtcaacaatcttggtgtgtttg-ttcctttctttgattgcttatctttattgctttgattatac 47098972  T
Q  298 ttgtggtgatgctttacacttagatttaagtcag-tttgttgttgttgcttg 348  Q
    |||||||| |||| |||||||||||||| ||| | |||||||||||| ||||    
T  47098973 ttgtggtgttgctctacacttagatttaggtctgttttgttgttgttacttg 47099024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 2 - 344
Target Start/End: Complemental strand, 29652060 - 29651713
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattc---attgagagtgtgggtgac 98  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||||| ||| ||||| |||||||||||||||||   ||||||||||||||||||    
T  29652060 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagtttccttttgtgttttctcttaggattcattattgagagtgtgggtgac 29651961  T
Q  99 ttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagct 197  Q
       |||| || ||||||||| || |||||||| ||| |||||  ||| |||||||||||||  | |||||| |||||| ||| || |||||||||| |||    
T  29651960 -acaaaatgggtagaaattaggtcttgttcttgtgtaagcttataagttaatttcttgtaattcttttgtaacactttcatcatagtggattggagtgct 29651862  T
Q  198 gctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgatta 294  Q
    ||| ||||||||| | |||||||||||||||||||||||||  |  || |||||||||||| || ||||||| | || |||||| || ||| ||||||||    
T  29651861 gctctctcccccagattaggtcatattggaccgaactgggtcaaaaatcttggtgtgtttg-ttcctttctttcattgcttatctttattgctttgatta 29651763  T
Q  295 tgtttgtggtgatgctttacacttagatttaagtcagtttgttgttgttg 344  Q
    || |||||||| |||| ||||||||||| |||||| |||| |||||||||    
T  29651762 tgcttgtggtgttgctctacacttagatctaagtctgttttttgttgttg 29651713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 2 - 346
Target Start/End: Original strand, 47703785 - 47704133
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcat--tgagagtgtgggtgact 99  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||||||||| |||| ||||| |||||||||||||||||||  || ||| |||||||||     
T  47703785 cattgtaaacaccttgggtagtgagatttcaccattggaatgataaaaaaacttccttttgtgttttctcttaggattcatattgtgagagtgggtgaca 47703884  T
Q  100 tgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctg 198  Q
      |||| || ||||||||| || |||||||| ||| |||||| |||||||||||||||||  | |||||| |||||| ||| || |||||||||||||||    
T  47703885 c-aaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaattcttttgtaacactttcatcatagtggattggagagctg 47703983  T
Q  199 ctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgattat 295  Q
    || ||||||||| | |||||||||||||||||||||||||  || || ||||||||||| ||| ||||||| | || |||||| || ||| ||||||||     
T  47703984 ctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgttt-tttcctttctttcattgcttatctttattgctttgattaa 47704082  T
Q  296 gtttgtggtgatgctttacacttagatttaagtcagtttgttgttgttgct 346  Q
      |||||||| |||| |||||||||||||| |||  ||| |||||||||||    
T  47704083 acttgtggtgttgctctacacttagatttaggtctattttttgttgttgct 47704133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 2 - 348
Target Start/End: Original strand, 16124364 - 16124718
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcatt---gagagtgtgggtgac 98  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||   || ||||||||| ||    
T  16124364 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcattattgaaagtgtgggtaac 16124463  T
Q  99 ttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagct 197  Q
       |||| || ||||||||| || |||||||| ||| |||||  |||||||||||||||||| | |||||| |||||| ||| || |||||||||| |||    
T  16124464 ac-aaaatgggtagaaattaggtcttgttcttatgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggct 16124562  T
Q  198 gctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgatta 294  Q
    ||| ||||||||| | |||||||||||||||||||||| ||  || || ||||||||||||||   |||||| | |  |||||| || ||| ||||||||    
T  16124563 gctctctcccccagattaggtcatattggaccgaactgagtcaacaatcttggtgtgtttgttccttttctttcatagcttatctttattgctttgatta 16124662  T
Q  295 tgtttgtggtgatgctttacacttagatttaagtcag--tttgttgttgttgcttg 348  Q
    ||||||||||| |||| |||| |||||| || ||| |  |||||||||||||||||    
T  16124663 tgtttgtggtgttgctctacatttagatctaggtctgtttttgttgttgttgcttg 16124718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 2 - 344
Target Start/End: Complemental strand, 13598647 - 13598301
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggat---tcattgagagtgtgggtgac 98  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||   ||||||||||||||||||||    
T  13598647 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcatcattgagagtgtgggtgac 13598548  T
Q  99 ttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagct 197  Q
       |||| |  ||||||||| || |||||||| ||| |||||  |||||||||||||||| | | |||||| |||||| ||| || ||||||| || |||    
T  13598547 -acaaaatgagtagaaattaagtcttgttcttgtgtaagcttataagctaatttcttgtatctcttttgtaacactttcatcatagtggattgaagggct 13598449  T
Q  198 gctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgatta 294  Q
    ||| ||||||||| | |||||||||||||||||||||||||  || || |||||||||||| || ||||||| | || |||||| || ||| ||||||||    
T  13598448 gctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttg-ttcctttctttcattgcttatctttattgctttgatta 13598350  T
Q  295 tgtttgtggtgatgctttacacttagatttaagtcagtttgttgttgttg 344  Q
    || |||||||| | || ||||||||||| || ||| |||| |||||||||    
T  13598349 tgcttgtggtgtttctctacacttagatctaggtctgttt-ttgttgttg 13598301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 110 - 348
Target Start/End: Original strand, 9023798 - 9024031
Alignment:
Q  110 tagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctccccc 209  Q
    ||||||||| || || ||||||||||||||  | |||||||| ||||| ||| ||||||||||||| ||| || |||||||||||||| |||| | ||||    
T  9023798 tagaaattaggtcttattctttgtgagcttttatgctaatttattgtatcccatttgtatcactttcatcttagtggattggagagctactatattcccc 9023897  T
Q  210 atagtaggtcatattggaccgaactgggttaccatattggtgtgtttgttttctttcttgctttcttatc-ttgttgttttgattatgtttgtggtgatg 308  Q
    ||| |||||||||||||| |||||| ||||||||      |||||||||||||||||||||||||||||| || |||  ||||||||| |||||||| ||    
T  9023898 ataataggtcatattggagcgaactaggttacca------tgtgtttgttttctttcttgctttcttatctttattgcattgattatgcttgtggtgttg 9023991  T
Q  309 ctttacacttagatttaagtcagtttgttgttgttgcttg 348  Q
    || |||||||||||||| ||  |||||||||| |||||||    
T  9023992 ctatacacttagatttaggtatgtttgttgttattgcttg 9024031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 2 - 234
Target Start/End: Complemental strand, 32889685 - 32889453
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    ||||||||||||| ||| |||||||||||||||||||||||| | |||| ||||||||| | ||||||||||||||||||||||||||||||||||  ||    
T  32889685 cattgtaaacaccttgggtagtgagatttcaccattggaaggttcaaaa-gcttctttt-gtgttttctcttaggattcattgagagtgtgggtgatatg 32889588  T
Q  102 aaaaa-ggatagaaattatgttttgttctt-tgtgagcttgcaagctaattt-cttgtaacccctttgtatcactttgatcctaatggattggagagctg 198  Q
    ||||| || ||||||||| |  |||||||| ||| ||||||||||||| ||| |||||||| | || ||| |||||| ||| || |||||||||||||||    
T  32889587 aaaaatgggtagaaattaggacttgttcttgtgtaagcttgcaagctatttttcttgtaactcatt-gtaacactttcatcttagtggattggagagctg 32889489  T
Q  199 ctatctcccccatagtaggtcatattggaccgaact 234  Q
    || | ||||||| | |||||||||||||||||||||    
T  32889488 ctctatcccccagactaggtcatattggaccgaact 32889453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 2 - 347
Target Start/End: Original strand, 47102689 - 47103040
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    ||||||||||||| ||| ||||||||||||| |||||||||||| |||||||||  ||||| ||||| ||||||||||||||||||||||| ||||  ||    
T  47102689 cattgtaaacaccttgggtagtgagatttcatcattggaaggatcaaaaagctttcttttgtgttttttcttaggattcattgagagtgtgagtgatatg 47102788  T
Q  102 aaaaa---ggatagaaattatgttttgttc-tttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagct 197  Q
    |||||   | |||||||||| |  |||||| |||||  ||||  ||| ||||||||||||| | | ||||| || ||| ||| || |||||||||  |||    
T  47102789 aaaaatgggtatagaaattaggacttgttcttttgtatgcttataagttaatttcttgtaa-ctcattgtaacattttcatcttagtggattggatggct 47102887  T
Q  198 gctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttc-ttgctttcttatc-ttgttgttttgatta 294  Q
    ||| ||||||| | | |||||||||||||||||||||||||  || || |||||||||||| || ||||| ||| || |||||| || ||| ||||||||    
T  47102888 gctctctcccctagattaggtcatattggaccgaactgggtcaacaattttggtgtgtttg-ttcctttctttgattgcttatctttattgctttgatta 47102986  T
Q  295 tgtttgtggtgatgctttacacttagatttaagtcag-tttgttgttgttgctt 347  Q
    |  |||||||| |||| |||||||||||||| ||| | ||||||||||||||||    
T  47102987 tacttgtggtgttgctctacacttagatttaggtctgttttgttgttgttgctt 47103040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 2 - 259
Target Start/End: Complemental strand, 9476509 - 9476249
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattca--ttgagagtgtgggtgact 99  Q
    ||||||||||| | ||| |||||||||||||||||| ||||||| |||||||||| ||||| ||||||||||| ||||||  ||| ||| ||| |||||     
T  9476509 cattgtaaacatcttgggtagtgagatttcaccatttgaaggatcaaaaagcttccttttgtgttttctcttaagattcacattgtgagagtgagtgaca 9476410  T
Q  100 tgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctg 198  Q
      |||| |||||||||||| || |||||||| ||| |||||| ||||||||||||| |||| | ||||||  ||||| ||| || |||||||||||||||    
T  9476409 c-aaaatggatagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttataactcttttgtaatactttcatcatagtggattggagagctg 9476311  T
Q  199 ctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgtt 259  Q
    || ||||||| | | |||||||||||||||||||||||||  || || ||||||||||||||    
T  9476310 ctctctcccctagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgtt 9476249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 2 - 175
Target Start/End: Original strand, 40816666 - 40816838
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||       
T  40816666 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcattgagagtgtgggtgac--- 40816762  T
Q  102 aaaaagga-tagaaattatgttttgttc-tttgtgagcttgcaagctaatttcttgtaacccctttgtatcacttt 175  Q
    | ||| || ||||||||| || |||||| ||||| |||||  |||||||||||||||||| | |||||| ||||||    
T  40816763 acaaatgagtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacacttt 40816838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 2 - 317
Target Start/End: Original strand, 26644748 - 26645066
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcat---tgagagtgtgggtgac 98  Q
    ||||||||||||| ||  |||||||||||||||||||||||||| |||| ||||| ||||| || |||||||||| |||||   |||||| ||| |  ||    
T  26644748 cattgtaaacaccttgagtagtgagatttcaccattggaaggatcaaaa-gcttccttttgtgtcttctcttagggttcatcattgagagagtgagaaac 26644846  T
Q  99 ttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagct 197  Q
        ||| || ||||||||| || |||||||| ||| ||||||||||||| ||||||||||| | |||||| |||||| ||| |||||||||||||||||    
T  26644847 ac--aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcatcataatggattggagagct 26644943  T
Q  198 gctatctcccccatagtaggtcatattggaccgaactgggttacca---tattggtgtgtttgttttctttcttgc-tttcttatcttgttgttttgatt 293  Q
    ||| ||||||||| | ||||||||||||||||||||||||| | ||   | |||||||||||| || ||||||| | || ||||||||  || |||| ||    
T  26644944 gctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttg-ttcctttctttcattgcttatctttgtgctttgttt 26645042  T
Q  294 atgtttgtggtgatgctttacact 317  Q
    ||| |||||||| |||| ||||||    
T  26645043 atgcttgtggtgttgctctacact 26645066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 2 - 238
Target Start/End: Complemental strand, 3281954 - 3281718
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcat---tgagagtgtgggtgac 98  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||| ||||| ||||| || |||||||||| |||||   |||||| |||||  ||    
T  3281954 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaa-gcttccttttgtgtcttctcttagggttcatcattgagagagtgggaaac 3281856  T
Q  99 ttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagct 197  Q
        ||| || ||||||||| || |||||||| ||| ||||||||||||| ||||||||||| | |||||| |||||| ||| |  ||||||||||||||    
T  3281855 ac--aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcatcatcgtggattggagagct 3281759  T
Q  198 gctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||| ||||||||| | |||||||||||||||||||||||||    
T  3281758 gctctctcccccagattaggtcatattggaccgaactgggt 3281718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 53 - 349
Target Start/End: Original strand, 32736897 - 32737197
Alignment:
Q  53 cttctttttgggttttctcttaggattcattgagagtgtgggtgacttgaaaaa-ggatagaaattatgttttgttctttgtgagcttgcaagctaattt 151  Q
    |||| ||| ||||||||||||||||||||||| |||||| | |||||||||||| || ||||||||| | |||||||||| ||| |||  ||||||||||    
T  32736897 cttcctttagggttttctcttaggattcattgtgagtgtcgatgacttgaaaaatgggtagaaattagggtttgttctttatgaacttttaagctaattt 32736996  T
Q  152 cttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggt 250  Q
     |||||||| ||||||||||| || ||| || | |||  ||||| | || |||| |||| |||||||||| ||||| ||| ||| ||  || ||||| ||    
T  32736997 tttgtaacctctttgtatcaccttcatcatagttgatcagagagtttctctctctcccagagtaggtcattttggatcgatctgagtacacaatatttgt 32737096  T
Q  251 gtgtttgttttctttct-tgctttcttatc-ttgttgttttgattatgtttgtggtgatgctttacacttagatttaagtcagttt-gttgttgttgctt 347  Q
    ||  | ||||||||||| | ||||||| || |||| | ||||||||| ||||||||| ||||| |||||||||| |||||| |||| |||||||||||||    
T  32737097 gt-ctagttttctttctcttctttcttttcattgtagctttgattatatttgtggtgttgcttcacacttagatctaagtctgtttcgttgttgttgctt 32737195  T
Q  348 ga 349  Q
    ||    
T  32737196 ga 32737197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 58 - 240
Target Start/End: Original strand, 17345425 - 17345607
Alignment:
Q  58 ttttgggttttctcttaggattcattgagagtgtgggtgacttgaaaaa-ggatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgt 156  Q
    ||||| ||||||||||| |||||||| |||||||||||||||| ||||| || ||||||||| ||||||||||||||| |||   | |||||||||||||    
T  17345425 ttttgtgttttctcttaagattcattaagagtgtgggtgacttaaaaaatgggtagaaattaggttttgttctttgtgggctcttatgctaatttcttgt 17345524  T
Q  157 aacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggtta 240  Q
    | | | |||||| ||| || ||| || |||||||||||||| || | | ||||| ||||||||||||| |||||||||||||||    
T  17345525 agcacatttgtaccacgttcatcttagtggattggagagctcctct-ttccccagagtaggtcatattagaccgaactgggtta 17345607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 2 - 238
Target Start/End: Original strand, 21536420 - 21536656
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcat---tgagagtgtgggtgac 98  Q
    ||||||||||||| ||| |||| |||||||||||||||||||||  ||| ||||| ||||| || |||||||||| |||||   |||||| |||||| ||    
T  21536420 cattgtaaacaccttgggtagtaagatttcaccattggaaggatcgaaa-gcttccttttgtgtcttctcttagggttcatcattgagagagtgggtaac 21536518  T
Q  99 ttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagct 197  Q
        ||| || ||||||||| || |||||||| ||| ||||||||||||| ||||||||||| | |||||| |||||| ||  || ||||||||||||||    
T  21536519 ac--aaacgggtagaaattaagtattgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcattatagtggattggagagct 21536615  T
Q  198 gctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||| ||||||||| | |||||||| ||  ||||||||||||    
T  21536616 gctctctcccccagattaggtcattttttaccgaactgggt 21536656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 142 - 348
Target Start/End: Original strand, 27104363 - 27104569
Alignment:
Q  142 aagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt-ta 240  Q
    |||||||||||||||||| | |||||| |||||| ||| || ||||||||||||||||| ||||||||| | ||||| |||||||||||||||| ||  |    
T  27104363 aagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggttatattggaccgaactgtgtcaa 27104462  T
Q  241 ccatattggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgattatgtttgtggtgatgctttacacttagatttaagtcagtttgttg 338  Q
    | || |||||||||||| || |||| || | || |||||| || ||| |||||||||| |||||||| |||| |||||||||||||| ||| |||  |||    
T  27104463 caatcttggtgtgtttg-ttcctttatttcattgcttatctttattgctttgattatgcttgtggtgttgctctacacttagatttaggtctgtt--ttg 27104559  T
Q  339 ttgttgcttg 348  Q
    ||||||||||    
T  27104560 ttgttgcttg 27104569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 38 - 170
Target Start/End: Original strand, 35109423 - 35109556
Alignment:
Q  38 ggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttgaaaa-aggatagaaattatgttttgttctttgtgag 136  Q
    ||||||||||||||||||| ||| |  ||||||| |||||||||||| ||||||| ||||||||||||  || ||||||||| | |||||||||||||||    
T  35109423 ggaaggataaaaaagcttcctttagtattttctcgtaggattcattgtgagtgtgtgtgacttgaaaattgggtagaaattaaggtttgttctttgtgag 35109522  T
Q  137 cttgcaagctaatttcttgtaacccctttgtatc 170  Q
    |||  |||||||||||||||||||  ||||||||    
T  35109523 cttttaagctaatttcttgtaacctatttgtatc 35109556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 2 - 238
Target Start/End: Original strand, 13604472 - 13604710
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctctt-aggattcatt---gagagtgtgggtga 97  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||| ||||| ||||| || ||||||| ||| ||||||   ||||| |||||  |    
T  13604472 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaa-gcttccttttgtgtcttctctttagggttcattattgagagagtgggaaa 13604570  T
Q  98 cttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaattt-cttgtaacccctttgtatcactttgatcctaatggattggagag 195  Q
    |    ||| || ||||||||| || |||||||| ||| || |||||||||| ||| |||||||| | |||||| || ||| ||| || ||||||||||||    
T  13604571 cac--aaatgggtagaaattaggtcttgttcttgtgtaagtttgcaagctatttttcttgtaactc-tttgtaacattttcatcatagtggattggagag 13604667  T
Q  196 ctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||||| ||||||||||| |||||||||||| ||| ||||||||    
T  13604668 ctgctctctcccccatattaggtcatattgaacctaactgggt 13604710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 9022756 - 9022857
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    ||||||||||||| |   |||||||||||||||||||||||||||||||||||||   ||| ||||||||||||||||||||| |||||||| |||||||    
T  9022756 cattgtaaacacctttcgtagtgagatttcaccattggaaggataaaaaagcttc--cttgagttttctcttaggattcattgtgagtgtggttgacttg 9022853  T
Q  102 aaaa 105  Q
    ||||    
T  9022854 aaaa 9022857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 163 - 348
Target Start/End: Complemental strand, 775757 - 775568
Alignment:
Q  163 tttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgtttt 261  Q
    |||||| |||||| ||| || |||||||||||||| || ||||||||| | ||||||||||||||||||| |||||  || || ||| |||||||| ||     
T  775757 tttgtaacactttcatcttagtggattggagagctactctctcccccagattaggtcatattggaccgaattgggtcaacaatcttgatgtgtttg-ttc 775659  T
Q  262 ctttcttgc-tttcttatc-ttgttgttttgattatgtttgtggtgatgctttacacttagatttaagtcag--tttgttgttgttgcttg 348  Q
    ||||||| | || |||||| || ||| |||||||||| |||||||| |||| |||||||||||||| ||| |  |||||||||||||||||    
T  775658 ctttctttcattgcttatctttattgctttgattatgcttgtggtgttgctctacacttagatttaggtctgtttttgttgttgttgcttg 775568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 238
Target Start/End: Original strand, 19358691 - 19358929
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctctt--aggattcat--tgagagtgtgggtga 97  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||  ||| ||||| | ||| || |||||||  ||| |||||  |||||| ||||| ||    
T  19358691 cattgtaaacaccttgggtagtgagatttcaccattggaaggatctaaa-gcttcctcttgtgtcttctcttttagggttcatattgagagagtggg-ga 19358788  T
Q  98 cttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaattt-cttgtaacccctttgtatcactttgatcctaatggattggagag 195  Q
         ||| || |||||  || || |||||||| ||| ||||||||||||| ||| |||||||||| |||||| |||||| ||| || ||||||||||||    
T  19358789 aacacaaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagag 19358887  T
Q  196 ctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||||| ||||||||||| ||||||||||| ||| |||||||||    
T  19358888 ctgctctctcccccatattaggtcatatt-gactgaactgggt 19358929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 238
Target Start/End: Original strand, 19361280 - 19361518
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctctt--aggattcat--tgagagtgtgggtga 97  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||  ||| ||||| | ||| || |||||||  ||| |||||  |||||| ||||| ||    
T  19361280 cattgtaaacaccttgggtagtgagatttcaccattggaaggatctaaa-gcttcctcttgtgtcttctcttttagggttcatattgagagagtggg-ga 19361377  T
Q  98 cttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaattt-cttgtaacccctttgtatcactttgatcctaatggattggagag 195  Q
         ||| || |||||  || || |||||||| ||| ||||||||| ||| ||| |||||||||| |||||| |||||| ||| || ||||||||||||    
T  19361378 aacacaaatgggtagaatctaggtcttgttcttgtgtaagcttgcaaactatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagag 19361476  T
Q  196 ctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||||| ||||||||||| ||||||||||| ||| |||||||||    
T  19361477 ctgctctctcccccatattaggtcatatt-gactgaactgggt 19361518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 238
Target Start/End: Original strand, 19379920 - 19380158
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctctt--aggattcat--tgagagtgtgggtga 97  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||  ||| ||||| | ||| || |||||||  ||| |||||  |||||| ||||| ||    
T  19379920 cattgtaaacaccttgggtagtgagatttcaccattggaaggatctaaa-gcttcctcttgtgtcttctcttttagggttcatattgagagagtggg-ga 19380017  T
Q  98 cttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaattt-cttgtaacccctttgtatcactttgatcctaatggattggagag 195  Q
         ||| || |||||  || || |||||||| ||| ||||||||| ||| ||| |||||||||| |||||| |||||| ||| || ||||||||||||    
T  19380018 aacacaaatgggtagaatctaggtcttgttcttgtgtaagcttgcaaactatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagag 19380116  T
Q  196 ctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||||| ||||||||||| ||||||||||| ||| |||||||||    
T  19380117 ctgctctctcccccatattaggtcatatt-gactgaactgggt 19380158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 2 - 238
Target Start/End: Complemental strand, 37070014 - 37069780
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctctt-aggattcatt---gagagtgtgggtga 97  Q
    ||||||||||||| ||| || ||||||||||||||||||||||| |||| ||||| ||||| || ||||||| | | ||||||   ||| | |||||| |    
T  37070014 cattgtaaacaccttggataatgagatttcaccattggaaggatcaaaa-gcttccttttgtgtcttctctttatggttcattattgagtgagtgggtaa 37069916  T
Q  98 cttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagc 196  Q
    |    ||| || ||||||||| || |||||||| ||| ||||||||| ||| |||   ||||| | |||||| |||||| ||| || ||||| ||||||     
T  37069915 cac--aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaaactatttt---gtaactc-tttgtaacactttcatcatagtggatcggagaga 37069822  T
Q  197 tgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||| ||||||||| | |||||||||||||||||||||||||    
T  37069821 tgctctctcccccagattaggtcatattggaccgaactgggt 37069780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 64 - 195
Target Start/End: Original strand, 918391 - 918524
Alignment:
Q  64 gttttctcttaggattcattgagagtgtgggtg-acttgaaaaa-ggatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaaccc 161  Q
    ||||||||||||||||||||| | || || ||| | |||||||| || ||||||||||| ||||||||||||||| ||| ||| |||||||||||||       
T  918391 gttttctcttaggattcattgtgggtttgagtggaattgaaaaatgggtagaaattatggtttgttctttgtgagtttgtaagataatttcttgtaatat 918490  T
Q  162 ctttgtatcactttgatcctaatggattggagag 195  Q
    |||||||||||| | ||| || ||| ||||||||    
T  918491 ctttgtatcactcttatcatagtggtttggagag 918524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 27104251 - 27104330
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattca 81  Q
    |||| ||| |||| ||| ||||||||||||||||||||||| || |||||||||| ||||| ||||||||||| ||||||    
T  27104251 cattataagcaccttgggtagtgagatttcaccattggaagaatcaaaaagcttccttttgtgttttctcttaagattca 27104330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 8281563 - 8281429
Alignment:
Q  4 ttgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttgaa 103  Q
    ||||||||||| ||| ||||||||| |||  |  ||||| |||||||| |||| ||| | |||||||||| |||||||||| ||||| ||||||||| ||    
T  8281563 ttgtaaacaccttgggtagtgagatctcattagaggaagaataaaaaaacttcctttagtgttttctctttggattcattgtgagtgcgggtgacttaaa 8281464  T
Q  104 -aaaggatagaaattatgttttgttctttgtgagc 137  Q
     ||  |||||||||||   ||||||||||||||||    
T  8281463 taattgatagaaattagaatttgttctttgtgagc 8281429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 24202740 - 24202844
Alignment:
Q  123 ttgttctt-tgtgagcttgcaagctaattt-cttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtca 220  Q
    |||||||| ||| ||||||||||||| ||| |||||||||| |||||| |||||| ||| || ||||||||||||||||| ||||||||| | |||| ||    
T  24202740 ttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggcca 24202838  T
Q  221 tattgg 226  Q
    ||||||    
T  24202839 tattgg 24202844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 11032279 - 11032342
Alignment:
Q  110 tagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcact 173  Q
    ||||||||||||||||||||||||||| ||  || |||||||||||||||| |||| |||||||    
T  11032279 tagaaattatgttttgttctttgtgagtttttaatctaatttcttgtaacctctttatatcact 11032342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 194
Target Start/End: Original strand, 48382441 - 48382524
Alignment:
Q  111 agaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggaga 194  Q
    |||||||| | |||| ||||||||| |||| ||| |||||||||||||||  ||||||||||||| ||| || |||||||||||    
T  48382441 agaaattagggtttgatctttgtgaacttgtaagttaatttcttgtaacctatttgtatcactttcatcatattggattggaga 48382524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 45644510 - 45644433
Alignment:
Q  101 gaaaaaggatagaaattatgttttgttctttgtgagcttg--caagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||| |||||||||||| |||||||||||||||||||||   |||||||||||||| ||| | |||||||| |||||    
T  45644510 gaaaatggatagaaattaagttttgttctttgtgagcttgtcaaagctaatttcttgcaactcatttgtatctctttg 45644433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 928131 - 928055
Alignment:
Q  102 aaaaaggatagaaattatgttttgttctttgtgagcttg--caagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||| ||||||||||| | |||||||||||||||||||   |||||||||||||||||||| |||| ||| |||||    
T  928131 aaaaatgatagaaattagggtttgttctttgtgagcttgttgaagctaatttcttgtaacccttttggatctctttg 928055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 11031327 - 11031428
Alignment:
Q  4 ttgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggtttt-ctcttaggattcattgagagtgtgggtgacttga 102  Q
    ||||||||||| ||| |||||||  ||||  ||||||||||| |||||||||| ||| | ||||| |||||||||| ||||| |||||||  ||||||||    
T  11031327 ttgtaaacaccgtgggtagtgag--ttcattattggaaggatcaaaaagcttcctttagtgtttttctcttaggatacattgtgagtgtgaatgacttga 11031424  T
Q  103 aaaa 106  Q
    ||||    
T  11031425 aaaa 11031428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 834322 - 834246
Alignment:
Q  101 gaaaaaggatagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||| |||||||||||| | || ||||||||||||||||   |||||||||||||||||||| |||||||| |||||    
T  834322 gaaaatggatagaaattagggtt-gttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatccctttg 834246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 4552792 - 4552716
Alignment:
Q  101 gaaaaaggatagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||| || ||||||||| |||| || |||||||||||||   ||||||||||||||||||||||||||||| |||||    
T  4552792 gaaaatgggtagaaattaggttt-gtcctttgtgagcttgttgaagctaatttcttgtaacccctttgtatccctttg 4552716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 9459479 - 9459425
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||||||| |||||| ||||||||| | ||||||| |||||||||||||||||    
T  9459479 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggt 9459425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 9463306 - 9463252
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||||||| |||||| ||||||||| | ||||||| |||||||||||||||||    
T  9463306 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggt 9463252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 16226386 - 16226440
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||||||| |||||| ||||||||| | ||||||| |||||||||||||||||    
T  16226386 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggt 16226440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 19366157 - 19366199
Alignment:
Q  3 attgtaaacaccctggttagtgagatttcaccattggaaggat 45  Q
    |||||||||||| ||| ||||||||||||||||||||||||||    
T  19366157 attgtaaacaccttgggtagtgagatttcaccattggaaggat 19366199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 22079329 - 22079405
Alignment:
Q  101 gaaaaaggatagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    |||||| | |||||||||||||| ||||||||||||||||   |||||||||||||||||||  |||||||| |||||    
T  22079329 gaaaaatggtagaaattatgttt-gttctttgtgagcttgttaaagctaatttcttgtaaccattttgtatctctttg 22079405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 234
Target Start/End: Original strand, 41361038 - 41361072
Alignment:
Q  200 tatctcccccatagtaggtcatattggaccgaact 234  Q
    |||||||||||||||||||||||||||||||||||    
T  41361038 tatctcccccatagtaggtcatattggaccgaact 41361072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 176
Target Start/End: Original strand, 10925237 - 10925312
Alignment:
Q  102 aaaaaggatagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    |||| |||||||||||||| || ||||||||||||||||   |||||||||||||||||| | |||||||| |||||    
T  10925237 aaaatggatagaaattatggtt-gttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttg 10925312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 65 - 173
Target Start/End: Complemental strand, 10997140 - 10997031
Alignment:
Q  65 ttttctcttaggattcattgagagtgtgggtgacttgaaaaa-ggatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccct 163  Q
    |||||| ||||||||||  | ||||| ||||||||||||||| || ||||||||| | |||||| ||||| | |||  ||| ||||||||||||||   |    
T  10997140 ttttcttttaggattcaacgtgagtgagggtgacttgaaaaatgggtagaaattagggtttgttatttgttatcttttaagttaatttcttgtaacatat 10997041  T
Q  164 ttgtatcact 173  Q
    ||||||||||    
T  10997040 ttgtatcact 10997031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 16231782 - 16231834
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgg 236  Q
    |||||||||| |||||| ||||||||| | ||||||| |||||||||||||||    
T  16231782 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgg 16231834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 47255474 - 47255419
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||||||||   |||||||||||||||||||| |||||||| |||||    
T  47255474 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttg 47255419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 101 - 169
Target Start/End: Original strand, 3460708 - 3460778
Alignment:
Q  101 gaaaaaggatagaaattatgttttgttctttgtgagcttg--caagctaatttcttgtaacccctttgtat 169  Q
    |||||||| |||||||||   |||||||||||||||||||   |||||||||| ||||||||| |||||||    
T  3460708 gaaaaagggtagaaattagagtttgttctttgtgagcttgttgaagctaatttattgtaacccttttgtat 3460778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 123 - 175
Target Start/End: Original strand, 11348732 - 11348786
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcacttt 175  Q
    ||||||||||||||||||   |||||||||||||||||||| |||||||| ||||    
T  11348732 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 11348786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 31659273 - 31659327
Alignment:
Q  124 tgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    |||||||||||||||||   |||||||||||||||||||| |||||||| |||||    
T  31659273 tgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttg 31659327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 8550942 - 8550866
Alignment:
Q  101 gaaaaaggatagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||| || ||||||||| |||| ||||||||||||||||   |||||||||||||||||| | |||||||| |||||    
T  8550942 gaaaatgggtagaaattaggttt-gttctttgtgagcttgtttaagctaatttcttgtaactcatttgtatccctttg 8550866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 160
Target Start/End: Original strand, 9036431 - 9036489
Alignment:
Q  103 aaaaggatagaaattatgttttgttctttgtgagcttg-caagctaatttcttgtaacc 160  Q
    |||||| ||||||||| | ||||||| |||||| |||| ||||||||||||||||||||    
T  9036431 aaaagggtagaaattagggtttgttcattgtgaacttgtcaagctaatttcttgtaacc 9036489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 13316507 - 13316431
Alignment:
Q  101 gaaaaaggatagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    |||||||| ||||||||| | || ||||||||||| ||||   |||||||||||||||||||| |||||||| |||||    
T  13316507 gaaaaagggtagaaattagggtt-gttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttg 13316431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 23786058 - 23786112
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||||| |||| |||||| ||||||||| | ||||||| |||||||||||||||||    
T  23786058 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggt 23786112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 41360927 - 41361003
Alignment:
Q  101 gaaaaaggatagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||| || ||||||||| |||| ||||||||||||||||   || ||||||||||||||||| |||||||| |||||    
T  41360927 gaaaatgggtagaaattaggttt-gttctttgtgagcttgttgaaactaatttcttgtaacccatttgtatctctttg 41361003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 51752582 - 51752636
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||||||| |||||| ||||||||| | |||||||  ||||||||||||||||    
T  51752582 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggt 51752636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 238
Target Start/End: Original strand, 23816102 - 23816159
Alignment:
Q  181 taatggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||||| |||| | |||| ||||||||||| |||||||  ||||||||||||||||    
T  23816102 taatggatcggagggatgctctctcccccatactaggtcaatttggaccgaactgggt 23816159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 174
Target Start/End: Complemental strand, 37918783 - 37918734
Alignment:
Q  125 gttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactt 174  Q
    ||||||| |||||||| || |||||||||||||||  |||||||||||||    
T  37918783 gttctttatgagcttgaaatctaatttcttgtaacatctttgtatcactt 37918734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 176
Target Start/End: Complemental strand, 40122333 - 40122277
Alignment:
Q  122 tttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    |||||||||||||||||||   ||||||||||||| |||| | ||||||||||||||    
T  40122333 tttgttctttgtgagcttgtttaagctaatttcttataactcatttgtatcactttg 40122277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 344
Target Start/End: Original strand, 40816870 - 40816927
Alignment:
Q  287 tttgattatgtttgtggtgatgctttacacttagatttaagtcagtttgttgttgttg 344  Q
    |||||||||| | |||||| |||| |||||||||||||| ||| |||| |||||||||    
T  40816870 tttgattatgctcgtggtgttgctctacacttagatttaggtctgttttttgttgttg 40816927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 3156899 - 3156954
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||| ||||   |||||||||||||||||||| |||||||| |||||    
T  3156899 ttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttg 3156954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 238
Target Start/End: Complemental strand, 13138018 - 13137982
Alignment:
Q  202 tctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||||||| | |||||||||||||||||||||||||||    
T  13138018 tctcccctagagtaggtcatattggaccgaactgggt 13137982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 13547223 - 13547168
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||||||||   |||||| ||||||||||||| |||||||| |||||    
T  13547223 ttgttctttgtgagcttgttgaagctattttcttgtaacccatttgtatctctttg 13547168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 175
Target Start/End: Original strand, 15820340 - 15820395
Alignment:
Q  122 tttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcacttt 175  Q
    |||||||||||||||||||   |||||||||||||||||| | |||||||| ||||    
T  15820340 tttgttctttgtgagcttgttgaagctaatttcttgtaacacatttgtatctcttt 15820395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 19754529 - 19754584
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||||||||   |||||||||||||||||||  |||||||| |||||    
T  19754529 ttgttctttgtgagcttgttgaagctaatttcttgtaaccgatttgtatctctttg 19754584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 28220360 - 28220305
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||| ||||   |||||||||||||||||||| |||||||| |||||    
T  28220360 ttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttg 28220305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 28265688 - 28265633
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    |||||| |||||||||||   |||||||||||||||||||| |||||||| |||||    
T  28265688 ttgttcattgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttg 28265633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 238
Target Start/End: Original strand, 39462744 - 39462792
Alignment:
Q  190 ggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||||||||||| ||||||||| | |||||||  ||||||||||||||||    
T  39462744 ggagagctgctctctcccccagactaggtcaatttggaccgaactgggt 39462792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 322
Target Start/End: Original strand, 48382576 - 48382655
Alignment:
Q  243 atattggtgtgtttgttttctttcttgctttcttatctt-gttgttttgattatgtttgtggtgatgctttacacttagat 322  Q
    ||||||||||||| ||||| | ||||  ||| ||||||| |||| ||| ||||||||||||||| ||||| ||||||||||    
T  48382576 atattggtgtgtt-gttttgtctcttcttttattatctttgttgctttaattatgtttgtggtgttgcttcacacttagat 48382655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 49918384 - 49918439
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||| ||||   |||||||||||||||||||| |||||||| |||||    
T  49918384 ttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttg 49918439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 50167309 - 50167254
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||| ||||||||||||   |||||||||||||||||||| |||||||| |||||    
T  50167309 ttgttatttgtgagcttgtcaaagctaatttcttgtaacccatttgtatctctttg 50167254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 50169344 - 50169289
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||||||||   |||||||||||||||||| | |||||||| |||||    
T  50169344 ttgttctttgtgagcttgtcaaagctaatttcttgtaactcatttgtatctctttg 50169289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 161; Significance: 9e-86; HSPs: 66)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 2 - 325
Target Start/End: Original strand, 15903740 - 15904063
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    ||||||||||||  ||| || ||||||||||||||||||| |||||||||| ||  ||||| |||||||| |||||||||||||||||||||||||||||    
T  15903740 cattgtaaacacattggataatgagatttcaccattggaatgataaaaaagatttcttttgtgttttctcataggattcattgagagtgtgggtgacttg 15903839  T
Q  102 aaaaa-ggatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgct 200  Q
    ||||| || |||||||||   ||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||| || |||||||||||  | ||    
T  15903840 aaaaatgggtagaaattagaatttgttctttgtgagcttgtaagcta-tttcttgtaacccctttgtatcacttttatcttagtggattggagattttct 15903938  T
Q  201 atctcccccatagtaggtcatattggaccgaactgggttaccatattggtgtgtttgttttctttcttgctttcttatcttgttgttttgattatgtttg 300  Q
     |||||  || |||||||||||||||| |||||| ||||||||| ||||||| |||||||||||||||| ||||||||||||||  |||| ||||| |||    
T  15903939 ctctccgtcagagtaggtcatattggatcgaactaggttaccatcttggtgtatttgttttctttcttgatttcttatcttgttcctttggttatgcttg 15904038  T
Q  301 tggtgatgctttacacttagattta 325  Q
    |||||||| ||||||| ||| ||||    
T  15904039 tggtgatgttttacacatagtttta 15904063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 2 - 344
Target Start/End: Original strand, 2869542 - 2869889
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    ||||||||||||  ||| |||||||||||| |||||||||| || ||||||||||  || | ||||||||||||||||||||||||||||||||||||||    
T  2869542 cattgtaaacacattgggtagtgagatttcgccattggaagaatcaaaaagcttccgttagtgttttctcttaggattcattgagagtgtgggtgacttg 2869641  T
Q  102 aaaaa-ggatagaaattatgtttt-gttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgc 199  Q
    ||||| || ||||||||| ||||| |||||||||||||||  |||||||||||||||||| ||||||||||||||| ||| || |||||||||||||| |    
T  2869642 aaaaatgggtagaaattaggtttttgttctttgtgagcttttaagctaatttcttgtaactcctttgtatcactttcatcttagtggattggagagctac 2869741  T
Q  200 tatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgcttt-cttatc-ttgttgttttgattatg 296  Q
    | ||||||| | |||||||||||||||||||||||||||  || ||||||||||||||||| |||| |||  ||| |||||| |||||| ||||| ||||    
T  2869742 tctctcccctagagtaggtcatattggaccgaactgggtaaacaatattggtgtgtttgttctcttcctttatttgcttatctttgttgctttgaatatg 2869841  T
Q  297 tttgtggtgatgctttacacttagatttaagtcagtttgttgttgttg 344  Q
     || ||||| |||| |||||||||||||| |||  |||||||||||||    
T  2869842 cttatggtgttgctctacacttagatttaggtctatttgttgttgttg 2869889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 2 - 344
Target Start/End: Complemental strand, 40015172 - 40014829
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    ||||||||||||  ||| |||||||||||||||||||||||||| |||||||||| ||||| | ||| |||||||||| |||||||||||||||||| ||    
T  40015172 cattgtaaacacattggatagtgagatttcaccattggaaggatcaaaaagcttccttttgtgatttttcttaggatttattgagagtgtgggtgacatg 40015073  T
Q  102 aaaaaggatagaaattatgttttgttc-tttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgct 200  Q
    |||| |  ||||||||| || |||||| |||||||| ||  |||||||||||| | ||| | ||||||||||||| ||| || |||||||||| | || |    
T  40015072 aaaatgagtagaaattaggtcttgttcttttgtgagtttttaagctaatttctcgcaactcatttgtatcactttcatcttagtggattggagggatgtt 40014973  T
Q  201 atctcccccatagtaggtcatattggaccgaactgggttaccatattggtgtgtttgtttt-ctttcttgctttcttatcttgttgttttgattatgttt 299  Q
     |||||| || |||| ||||||||||| | |||||||||||||| || || | |||||||| |||||||| ||||||||||||||| |||||||||| ||    
T  40014972 ctctccctcagagtatgtcatattggatctaactgggttaccatctt-gtatatttgttttcctttcttggtttcttatcttgttgctttgattatgctt 40014874  T
Q  300 gtggtgatgctttacacttagatttaagtcagtttgttgttgttg 344  Q
    ||||||||| ||||||||||| |||| | | ||||||||||||||    
T  40014873 gtggtgatgttttacacttagttttaggactgtttgttgttgttg 40014829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 2 - 348
Target Start/End: Complemental strand, 31056290 - 31055938
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    ||||||||||||| ||| ||||||||||||||||||| |||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||       
T  31056290 cattgtaaacaccttgggtagtgagatttcaccattgaaaggatcaaaaagcttccttttgtgttttctcttaggattcattgagagtgtgggtgac-ac 31056192  T
Q  102 aaaaaggatagaaattatgttttgttc-tttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgct 200  Q
    |||| || ||||||||| || |||||| ||||| |||||  |||||||||| ||||||| | |||||| |||||| ||| || |||||||||||||||||    
T  31056191 aaaatgggtagaaattaggtcttgttcttttgtaagcttataagctaatttattgtaactcttttgtaacactttcatcttagtggattggagagctgct 31056092  T
Q  201 atctcccccatagtaggtcatattggaccgaactgggttacca--tattggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgattatg 296  Q
     ||||||| | | |||||||||||| |||||||| ||| | ||    ||||||||||||||   |||||| | || |||||| || ||| ||||||||||    
T  31056091 ctctcccctagattaggtcatattgaaccgaactaggtcaacaatctttggtgtgtttgttccttttctttcattgcttatctttattgctttgattatg 31055992  T
Q  297 tttgtggtgatgctttacacttagatttaagtcag--tttgttgttgttgcttg 348  Q
     |||||||| |||| |||||||||||||| ||| |  |||||||||||||||||    
T  31055991 cttgtggtgttgctctacacttagatttaggtctgtttttgttgttgttgcttg 31055938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 65 - 325
Target Start/End: Original strand, 27149207 - 27149470
Alignment:
Q  65 ttttctcttaggattcattgagagtgtgggtgacttgaaaaag-gatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccct 163  Q
    |||||||||||||||||||| ||||||||||||||| |||||  | ||||| ||| || |||||||||||||||||  ||| ||||||||||| ||||||    
T  27149207 ttttctcttaggattcattgtgagtgtgggtgacttaaaaaacaggtagaagttaagtcttgttctttgtgagcttttaaggtaatttcttgttacccct 27149306  T
Q  164 ttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggttaccatattggtgtgtttgttttct 263  Q
    |||||||||||| ||  || ||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||   | ||||||||||||||     
T  27149307 ttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttgtgtgtttgttttca 27149406  T
Q  264 ttcttgctttcttatctt--gttgttttgattatgtttgtggtgatgctttacacttagattta 325  Q
    || ||||| |||||||||  |||| ||||| ||||||| ||||  |||||||||| ||||||||    
T  27149407 ttattgctctcttatctttagttgatttgaatatgtttatggtattgctttacacatagattta 27149470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 2 - 259
Target Start/End: Original strand, 14698859 - 14699116
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    ||||||||||||| ||| |||||||||||||| ||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||       
T  14698859 cattgtaaacaccttgggtagtgagatttcactattggaaggatcaaaaagcttccttttgtgttttctcttaggattcattgagagtgtgggtgac-ac 14698957  T
Q  102 aaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgct 200  Q
    |||| || ||||||||| || |||||||| ||| |||||  |||||||||||||||||| | |||||| | |||| ||| || |||||||||| ||||||    
T  14698958 aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaac-ctttcatcatagtggattggagggctgct 14699056  T
Q  201 atctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgtt 259  Q
     ||||||||| | |||||||||||||||||||||||||  || || ||||||||||||||    
T  14699057 ctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgtt 14699116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 2 - 344
Target Start/End: Complemental strand, 33118382 - 33118039
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    ||||||||||||| ||| |||||||||||| ||||||||||||| |||||||||| ||||| ||||||||||| ||||||||||||||| |||||||       
T  33118382 cattgtaaacaccttgggtagtgagatttcgccattggaaggatcaaaaagcttccttttgtgttttctcttaagattcattgagagtgagggtgac-ac 33118284  T
Q  102 aaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgct 200  Q
    |||| || ||||||||| || |||||||| ||| |||||  ||||||||||||||||||   |||||| | |||| ||| || |||||||||| ||||||    
T  33118283 aaaatgggtagaaattaagtcttgttcttgtgtaagcttataagctaatttcttgtaactattttgtaactctttcatcatagtggattggagggctgct 33118184  T
Q  201 atctcccccatagtaggtcatattggaccgaactg-ggttaccatattggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgattatgt 297  Q
     ||||||||| | |||||||||||||||||||||| |   || || |||||||||||| || ||||||| | || |||||| || ||  ||||||||||     
T  33118183 ctctcccccaaattaggtcatattggaccgaactgagccaacaatcttggtgtgtttg-ttcctttctttcattgcttatctttattactttgattatgc 33118085  T
Q  298 ttgtggtgatgctttacacttagatttaagtcagtttgttgttgttg 344  Q
    |||||||| |||| |||||||||||||| ||| |||| |||||||||    
T  33118084 ttgtggtgttgctctacacttagatttaggtctgttt-ttgttgttg 33118039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 2 - 344
Target Start/End: Complemental strand, 13569576 - 13569231
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcat--tgagagtgtgggtgact 99  Q
    |||| |||||||| ||| |||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||  || ||| |||||||||     
T  13569576 cattataaacaccttggatagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcatattgtgagagtgggtgaca 13569477  T
Q  100 tgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctg 198  Q
      | ||||| ||||||||| || |||||||| ||| | |||  |||||||||||||||||| | |||||| |||||| ||| || |||||||||||||||    
T  13569476 a-acaaagggtagaaattaggtcttgttcttgtgtaaacttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctg 13569378  T
Q  199 ctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatcttgttgttttgattatg 296  Q
    || ||||||||| | |||||||||||||||||||||||||  || || |||||||||||  || ||||||| | ||  |||||||  || ||||||||||    
T  13569377 ctctctcccccagattaggtcatattggaccgaactgggtcaacaattttggtgtgttt-attcctttctttcattgattatctttgtgctttgattatg 13569279  T
Q  297 tttgtggtgatgctttacacttagatttaagtcagtttgttgttgttg 344  Q
     |||||||| | || || |||||||| |||| | |||| |||||||||    
T  13569278 cttgtggtgtttctctatacttagatctaagcctgttttttgttgttg 13569231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 3 - 344
Target Start/End: Complemental strand, 39483179 - 39482833
Alignment:
Q  3 attgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattc---attgagagtgtgggtgact 99  Q
    |||||||||||| ||| |||||||||||||||||||||| ||| ||||| |||| ||||| |||||||||||||||||   ||||||||||||||||||     
T  39483179 attgtaaacaccttgggtagtgagatttcaccattggaatgatcaaaaaacttccttttgtgttttctcttaggattcattattgagagtgtgggtgaca 39483080  T
Q  100 tgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctg 198  Q
    | |||| || ||||||||| || |||||||| ||| |||||  |||||||||||||||||| | |||||| || ||| ||| || ||||||||||  |||    
T  39483079 t-aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacattttcatcatagtggattggaggcctg 39482981  T
Q  199 ctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgattat 295  Q
    || ||||||||||| ||||||||||||||||||||| |||  || || |||||||||||| || || |||| | ||  ||||| || ||| |||| ||||    
T  39482980 ctctctcccccatattaggtcatattggaccgaactaggtcaacaatcttggtgtgtttg-ttcctctctttcattgtttatctttattgctttggttat 39482882  T
Q  296 gtttgtggtgatgctttacacttagatttaagtcagtttgttgttgttg 344  Q
    | |||||||| || | |||||||||||||| ||| |||| |||||||||    
T  39482881 gcttgtggtgttgttctacacttagatttaggtctgttttttgttgttg 39482833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 2 - 322
Target Start/End: Complemental strand, 20522469 - 20522144
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcatt---gagagtgtgggtgac 98  Q
    ||||||||||| | ||| |||||||||||||||||| ||| ||| |||||||||| ||||| ||||| |||||||| |||||   |||||||||||||||    
T  20522469 cattgtaaacaacttgggtagtgagatttcaccatttgaatgatcaaaaagcttccttttgtgttttttcttaggactcattattgagagtgtgggtgac 20522370  T
Q  99 ttgaaaaaggatagaaattatgttttgttcttt-gtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagct 197  Q
       |||| || ||||||||| || ||||||||| || |||||  || ||||||||||||||||| |||||| |||||| ||| || |||||||||| | |    
T  20522369 ac-aaaatgggtagaaattaagtcttgttcttttgtaagcttataatctaatttcttgtaacccttttgtaacactttcatcatagtggattggagggtt 20522271  T
Q  198 gctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgatta 294  Q
    ||| ||||||||| | |||||||||||||||||||||||||  || || |||||||||||| || ||||||| | ||||||||| || ||| ||||||||    
T  20522270 gctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttg-ttcctttctttcatttcttatctttattgctttgatta 20522172  T
Q  295 tgtttgtggtgatgctttacacttagat 322  Q
    || |||||||| |||| |||||||||||    
T  20522171 tgcttgtggtgttgctctacacttagat 20522144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 2 - 259
Target Start/End: Complemental strand, 21630192 - 21629932
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattc---attgagagtgtgggtgac 98  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||   ||||||||||||||||||    
T  21630192 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcattattgagagtgtgggtgac 21630093  T
Q  99 ttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagct 197  Q
       |||| || ||||||||| || |||||||| ||| |||||  || ||||||||||||||| | |||||| |||||| ||| || ||||||||||||||    
T  21630092 -acaaaatgggtagaaattaagtcttgttcttgtgtaagcttataaactaatttcttgtaactcttttgtaacactttcatcatagtggattggagagct 21629994  T
Q  198 gctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgtt 259  Q
    ||| ||| ||||| | ||||||||||||||| |||||||||  || || ||||||||||||||    
T  21629993 gctctct-ccccagattaggtcatattggactgaactgggtcaacaatcttggtgtgtttgtt 21629932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 2 - 350
Target Start/End: Complemental strand, 34389098 - 34388753
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcat--tgagagtgtgggtgact 99  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||  || ||| |||||||||     
T  34389098 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcatattgtgagagtgggtgaca 34388999  T
Q  100 tgaaaaaggatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgc 199  Q
      |||| || ||||||||| || ||||||||        || |||||||||||||||||| | |||||| |||||| ||| || |||||||||||||| |    
T  34388998 c-aaaatgggtagaaattaggtcttgttcttg-------tgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctac 34388907  T
Q  200 tatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgcttt-cttatcttgttgttttgattatgt 297  Q
    | ||||||||| | ||||||||||||||||||| |||||  || || | |||||||||| || ||||||| ||||  |||||||  || ||||||| ||     
T  34388906 tctctcccccagattaggtcatattggaccgaattgggtcaacaatctcggtgtgtttg-ttcctttctttctttgtttatctttgtgctttgattttgc 34388808  T
Q  298 ttgtggtgatgctttacacttagatttaagtcag--tttgttgttgttgcttgaa 350  Q
    |||||||| |||| ||||||||||| || ||| |  |||||||||||||||||||    
T  34388807 ttgtggtgttgctctacacttagatctaggtctgtttttgttgttgttgcttgaa 34388753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 2 - 344
Target Start/End: Original strand, 8389999 - 8390344
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcat--tgagagtgtgggtgact 99  Q
    ||||||||||||| ||| ||||||||||| ||||||||||| || |||||||||| | ||| |||||||||||||||||||  || ||| |||||||||     
T  8389999 cattgtaaacaccttggatagtgagattttaccattggaagaatcaaaaagcttcctcttgtgttttctcttaggattcatattgtgagagtgggtgaca 8390098  T
Q  100 tgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctg 198  Q
      |||| || ||||||||| || |||||||| ||  |||||| |||||||||||||||||| | ||| || |||||| ||| || |||||||||||||||    
T  8390099 c-aaaatgggtagaaattaggtcttgttcttgtgcaagcttgtaagctaatttcttgtaactcttttttaacactttcatcatagtggattggagagctg 8390197  T
Q  199 ctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatcttgttgttttgattatg 296  Q
    || ||||||||| | |||||||| ||||||||||||||||  || || |||||||||||| ||  |||||| | |  ||||||||  || ||||||||||    
T  8390198 ctctctcccccaaattaggtcattttggaccgaactgggtcaacaattttggtgtgtttg-ttcatttctttcatcgcttatctttgtgctttgattatg 8390296  T
Q  297 tttgtggtgatgctttacacttagatttaagtcagtttgttgttgttg 344  Q
     |||||||| |||| ||||||||||| || ||| | || |||||||||    
T  8390297 cttgtggtgttgctctacacttagatctaggtctggtttttgttgttg 8390344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 2 - 348
Target Start/End: Original strand, 33528474 - 33528822
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattc---attgagagtgtgggtgac 98  Q
    ||||||||||||  ||| |||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||   ||||||||| ||||||||    
T  33528474 cattgtaaacacattgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcattattgagagtttgggtgac 33528573  T
Q  99 ttgaaaaaggatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctg 198  Q
       |||| || ||||||||| || ||||||||    |||||  |||||||||||||||||| | |||||| |||||| ||| || |||||||||| | ||    
T  33528574 -acaaaatgggtagaaattaggtcttgttctt----agcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggttg 33528668  T
Q  199 ctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgattat 295  Q
    || |||  |||||| |||||||||||||||||||||||||  || || |||||||||||| || ||||||| | ||  ||||| || ||| |||||||||    
T  33528669 ctctctttcccatattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttg-ttcctttctttcattgtttatctttattgctttgattat 33528767  T
Q  296 gtttgtggtgatgctttacacttagatttaagtcag--tttgttgttgttgcttg 348  Q
    | |||||||| |||| |||| |||||| || ||| |  |||||||||||||||||    
T  33528768 gcttgtggtgttgctctacatttagatctaggtctgtttttgttgttgttgcttg 33528822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 2 - 238
Target Start/End: Original strand, 2837879 - 2838117
Alignment:
Q  2 cattgtaaacaccctggttagtgaga-tttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgactt 100  Q
    ||||||||||||| ||| |||||||| ||||||||||||||||||||||||  ||| ||| | ||||||||||||||||||||||||  ||||||||| |    
T  2837879 cattgtaaacaccttggatagtgagaatttcaccattggaaggataaaaaatattcctttagtgttttctcttaggattcattgagaaggtgggtgacat 2837978  T
Q  101 gaaaaa-ggatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgc 199  Q
    |||||| ||  | |||||| ||| |||||||||||||||      ||||||||||||||| | ||||||||||||| ||  || |||||||||||  |||    
T  2837979 gaaaaatgggcaaaaattaggttgtgttctttgtgagctcttgtactaatttcttgtaactcatttgtatcactttcattttagtggattggagatgtgc 2838078  T
Q  200 tatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    | ||||||||| |||||||||||||||||||||||||||    
T  2838079 tctctcccccagagtaggtcatattggaccgaactgggt 2838117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 2 - 350
Target Start/End: Complemental strand, 8040311 - 8039954
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggtttt-ctcttaggattcat--tgagagtgtgggtgac 98  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||||||||| ||||  ||||| ||||||||||||||  || ||| |||||||||    
T  8040311 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttatgtttttctcttaggattcatattgtgagagtgggtgac 8040212  T
Q  99 ttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccc--tttgtatcactttgatcctaatggattggagag 195  Q
       |||| || ||||||||| || |||||||| ||| |||||| |||||||||||||||||| |   |||||| |||||| ||| || ||||||||||||    
T  8040211 ac-aaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaactctcttttgtaacactttcatcatagtggattggagag 8040113  T
Q  196 ctgctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttct-ttcttgctttcttatc-ttgttgttttgat 292  Q
    ||||| ||||||||| | ||||||||||||||| |||||||||  || || ||| ||| ||| ||| || | |||  || |||||| || ||| ||||||    
T  8040112 ctgctctctcccccagattaggtcatattggactgaactgggtcaacaatcttgatgtattt-tttcctctccttcattgcttatctttattgctttgat 8040014  T
Q  293 tatgtttgtggtgatgctttacacttagatttaagtcag--tttgttgttgttgcttgaa 350  Q
    |||| |||||||| |||| |||||||||||||| ||| |  |||||||||||||||||||    
T  8040013 tatgcttgtggtgttgctctacacttagatttaggtctgtttttgttgttgttgcttgaa 8039954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 2 - 238
Target Start/End: Original strand, 10707102 - 10707339
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcat--tgagagtgtgggtgact 99  Q
    ||||||||||||| ||| |||| ||||||||||||| ||||||| |||||||||| ||||| |||||||||||||||||||  || ||| |||||||||     
T  10707102 cattgtaaacaccttgggtagttagatttcaccattagaaggatcaaaaagcttccttttgtgttttctcttaggattcatattgtgagagtgggtgaca 10707201  T
Q  100 tgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctg 198  Q
       | | || ||||||||| || |||||||| ||| |||||| |||||||||||||||||| | |||||| |||||| ||| || |||||||||||| ||    
T  10707202 c--agatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagttg 10707299  T
Q  199 ctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
     | ||||||||||| |||||||||||||||||||||||||    
T  10707300 ttctctcccccatattaggtcatattggaccgaactgggt 10707339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 2 - 322
Target Start/End: Complemental strand, 17865452 - 17865127
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattc---attgagagtgtgggtgac 98  Q
    ||||||||||||| ||| |||||||||||||| | | ||||||| |||||||||| ||||| |||||||||||||||||   ||||||||||||| ||||    
T  17865452 cattgtaaacaccttgggtagtgagatttcacaaatagaaggatcaaaaagcttccttttgtgttttctcttaggattcattattgagagtgtggatgac 17865353  T
Q  99 ttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagct 197  Q
     | ||| ||| |||||||||||| |||||||| ||| |||||  |||||||||||||||||| | |||||| |||||| ||| || |||||||||| | |    
T  17865352 ataaaatagg-tagaaattatgtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggtt 17865254  T
Q  198 gctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgatta 294  Q
    ||| ||||||||| | ||||||||||| ||| |||||||||  || || |||||||| ||| || ||||||| | ||  ||||| || ||| ||||||||    
T  17865253 gctctctcccccagattaggtcatattcgactgaactgggtcaacaatcttggtgtgattg-ttcctttctttcattgattatctttattgctttgatta 17865155  T
Q  295 tgtttgtggtgatgctttacacttagat 322  Q
    || |||||||| |||| |||||||||||    
T  17865154 tgcttgtggtgttgctctacacttagat 17865127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 2 - 348
Target Start/End: Original strand, 34682183 - 34682535
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattca--ttgagagtgtgggtgact 99  Q
    ||||||||||||| ||| |||||||||||||||| | ||||||| |||| | ||| ||||| ||||||||||||||||||  ||| ||| |||||||||     
T  34682183 cattgtaaacaccttgggtagtgagatttcaccacttgaaggatcaaaatgtttccttttgtgttttctcttaggattcaccttgtgagagtgggtgaca 34682282  T
Q  100 tgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctg 198  Q
      |||| || ||||||||| || |||||||| ||| ||| || |||||||||||||||||| | |||||| |||||| ||  || |||||||||||||||    
T  34682283 c-aaaatgggtagaaattaagtcttgttcttgtgtaagcctgtaagctaatttcttgtaactcttttgtaacactttcattatagtggattggagagctg 34682381  T
Q  199 ctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttat-cttgttgttttgattat 295  Q
    || ||||||||| | || ||||||||||||||||||||||  || || |||||||||||| || || |||| | || |||||  || ||  |||||||||    
T  34682382 ctctctcccccagattatgtcatattggaccgaactgggtcaacaatcttggtgtgtttg-ttcctctctttcattgcttatatttatttgtttgattat 34682480  T
Q  296 gtttgtggtgatgctttacacttagatttaagtcag--tttgttgttgttgcttg 348  Q
    | |||||||| |||| |||||||||||||| ||| |  |||||||||||||||||    
T  34682481 gcttgtggtgttgctctacacttagatttaggtctgtttttgttgttgttgcttg 34682535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 2 - 349
Target Start/End: Complemental strand, 35397756 - 35397407
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    ||||||||  ||| ||| |||||||||||||||||||||||||| || || ||||   |||  ||||||||||||||||||||||| |||||||||||||    
T  35397756 cattgtaattaccttgggtagtgagatttcaccattggaaggatcaataa-cttcaaattgtattttctcttaggattcattgagattgtgggtgacttg 35397658  T
Q  102 aaaaa-ggatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgct 200  Q
    ||||| |||||||||||| | |||||||||| ||| |||  |||||||||| | |||||| |||| ||||||||| ||| || ||||||| |||||||||    
T  35397657 aaaaatggatagaaatta-ggtttgttctttatgaccttttaagctaattt-tcgtaacctctttatatcactttcatcttagtggattgaagagctgct 35397560  T
Q  201 atctcccccata-gtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgctttcttatcttg-ttgttttgattatgt 297  Q
    |||||| ||| | |||||| | |||| ||||||||||||  || |||||||||||||||||| |||  ||  || ||||| ||| ||| ||||||||||     
T  35397559 atctcctccagatgtaggttagattgaaccgaactgggtaaacaatattggtgtgtttgtttccttctttcattgcttatattgattgctttgattatgc 35397460  T
Q  298 ttgtggtgatgctttacacttagatttaagt-cagtttgttgttgttgcttga 349  Q
    |||||||  |||| | ||| |||||||| ||  | ||||||||||||||||||    
T  35397459 ttgtggttttgctctgcacatagatttaggtatattttgttgttgttgcttga 35397407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 2 - 344
Target Start/End: Original strand, 23078321 - 23078666
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcat---tgagagtgtgggtgac 98  Q
    ||||||||||||| ||| ||||||||||||| |||||||||||| |||| ||||| ||||| || |||||||||| |||||   ||||||||||||| ||    
T  23078321 cattgtaaacaccttgggtagtgagatttcatcattggaaggatcaaaa-gcttccttttgtgtcttctcttagggttcatcattgagagtgtgggtaac 23078419  T
Q  99 ttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagct 197  Q
        ||| || ||||||||| || |||||||| ||| ||||||||||||| ||||||||||| | ||| || |||||| ||| || |||||||||||| |    
T  23078420 ac--aaatgggtagaaattaagtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttctaacactttcatcatagtggattggagagtt 23078516  T
Q  198 gctatctcccccatagtaggtcatattggaccgaactgggttacca---tattggtgtgtttgttttctttcttgc-tttcttatcttgttgttttgatt 293  Q
    | | ||||||||||| |||||||||||||| |||||||||| | ||   | |||||||||||| || | ||||| | || ||||||||  || |||||||    
T  23078517 gttctctcccccatattaggtcatattggatcgaactgggtcaacattcttttggtgtgtttg-ttccattctttcattgcttatctttgtgctttgatt 23078615  T
Q  294 atgtttgtggtgatgctttacacttagatttaagtcagtttgttgttgttg 344  Q
    ||| |||||||| |||| ||||||||||| || ||  |||| |||||||||    
T  23078616 atgcttgtggtgttgctctacacttagatctaggtatgttttttgttgttg 23078666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 21 - 173
Target Start/End: Original strand, 18674270 - 18674423
Alignment:
Q  21 agtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattga-gagtgtgggtgacttgaaaaa-ggatagaaatta 118  Q
    ||||||||||||  |||| |||||| |||||||||| |||   ||||||||||| |||||||| | ||||||||||||||||||||| ||||||||||||    
T  18674270 agtgagatttcattattg-aaggatcaaaaagcttcctttaatgttttctcttatgattcatttatgagtgtgggtgacttgaaaaatggatagaaatta 18674368  T
Q  119 tgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcact 173  Q
    || ||||||||||||||||||  || |||||||||||||||||||| ||||||||    
T  18674369 tggtttgttctttgtgagcttttaaactaatttcttgtaaccccttggtatcact 18674423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 110 - 344
Target Start/End: Original strand, 10445402 - 10445639
Alignment:
Q  110 tagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccc 208  Q
    ||||||||| || |||||||| ||| || ||| |||||||||||||||||| | |||||| |||||| ||  || ||||||||||||||||| |||||||    
T  10445402 tagaaattaggtcttgttcttgtgtaagattgtaagctaatttcttgtaactcttttgtaacactttcataatagtggattggagagctgctctctcccc 10445501  T
Q  209 catagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgattatgtttgtggtg 305  Q
    || | ||||||||||||||||||||||| |  || || |||||||||||| || || |||| | || |||||| || ||| |||||||||| |||||||     
T  10445502 cagattaggtcatattggaccgaactggatcaacaatcttggtgtgtttg-ttcctctctttcattgcttatctttattgctttgattatgcttgtggtt 10445600  T
Q  306 atgctttacacttagatttaagtcagtttgttgttgttg 344  Q
     |||| |||||||||||||| ||| |||| |||||||||    
T  10445601 ttgctctacacttagatttaggtctgttttttgttgttg 10445639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 4 - 221
Target Start/End: Original strand, 28770626 - 28770844
Alignment:
Q  4 ttgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttgaa 103  Q
    ||||||||||| ||| ||||||||| |||  |   |||||||||||||| ||| ||| | ||||||||||||||||||||| |||||||  |||||||||    
T  28770626 ttgtaaacaccttgggtagtgagatctcattagctgaaggataaaaaagtttcctttagtgttttctcttaggattcattgcgagtgtgtatgacttgaa 28770725  T
Q  104 aaa-ggatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctat 202  Q
    ||| || |||||||||   ||||||||||||||||||  |||||||||||||||||   |||||||||| | | ||| ||  |||| ||||||||||| |    
T  28770726 aaatgggtagaaattagagtttgttctttgtgagcttttaagctaatttcttgtaatatctttgtatcattcttatcgtagaggatcggagagctgctct 28770825  T
Q  203 ctcccccatagtaggtcat 221  Q
     ||| ||| ||||||||||    
T  28770826 atcctccagagtaggtcat 28770844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 64 - 238
Target Start/End: Original strand, 1345453 - 1345628
Alignment:
Q  64 gttttctcttaggattcattgagagtgtgggtgacttgaaaaa-ggatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccc 162  Q
    ||||||| ||| ||||||||||||||| ||||||| ||||||| || ||||||||| ||| |||| ||||||||||     |||||||||||| ||| |     
T  1345453 gttttcttttatgattcattgagagtgggggtgacatgaaaaatgggtagaaattaggttgtgtt-tttgtgagctcatgtgctaatttcttgcaactca 1345551  T
Q  163 tttgtatcactttgatcctaa-tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||||||||||||| ||| ||| ||||| |||||| |||| ||||||||| |||||||||||||||||||||||||||    
T  1345552 tttgtatcactttcatcttaagtggatcggagaggtgctctctcccccagagtaggtcatattggaccgaactgggt 1345628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 2 - 238
Target Start/End: Original strand, 28259027 - 28259264
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctctt-aggattcatt---gagagtgtgggtga 97  Q
    ||||||||||| | ||| |||||||||||||||||||||||||| |||| ||||| ||||| || ||||||| |||  |||||   ||||| |||||  |    
T  28259027 cattgtaaacatcttgggtagtgagatttcaccattggaaggatcaaaa-gcttccttttgtgtcttctctttaggggtcattattgagagagtgggaaa 28259125  T
Q  98 cttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagc 196  Q
    |    ||| || |||||||||  | |||||||| ||| ||||||||||||| ||||||||||| | |||||| |||||| ||| || |||||||||||||    
T  28259126 cac--aaatgggtagaaattagatcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcatcatagtggattggagagc 28259222  T
Q  197 tgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||| ||||||||| | |||||||||||||||||||||||||    
T  28259223 tgctctctcccccaaattaggtcatattggaccgaactgggt 28259264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 2 - 317
Target Start/End: Original strand, 36757612 - 36757931
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctctt-aggattcat---tgagagtgtgggtga 97  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||| ||||| ||||| || ||||||| ||| |||||   |||||| |||||| |    
T  36757612 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaa-gcttccttttgtgtcttctctttagggttcatcattgagagagtgggtaa 36757710  T
Q  98 cttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagc 196  Q
    |    ||| || ||||||||| ||||||||||| ||| |||||| |||||  |||||| |||| | |||| | |||||| ||| || |||||||||||||    
T  36757711 cac--aaatgggtagaaattaggttttgttcttgtgtaagcttgaaagcttttttcttataactc-tttgaaacactttcatcatactggattggagagc 36757807  T
Q  197 tgctatctcccccatagtaggtcatattggaccgaactgggttacca---tattggtgtgtttgttttctttcttgc-tttcttatcttgttgttttgat 292  Q
    || |||| |||||| | ||||||||||||||||||| ||||| | ||   | |||||||||||| || ||||||| | || ||||||||  || |||| |    
T  36757808 tgttatcccccccagattaggtcatattggaccgaattgggtcaacaatcttttggtgtgtttg-ttcctttctttcattgcttatctttgtgctttgtt 36757906  T
Q  293 tatgtttgtggtgatgctttacact 317  Q
    |||| |||||||| |||| ||||||    
T  36757907 tatgcttgtggtgttgctctacact 36757931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 47 - 234
Target Start/End: Original strand, 42039563 - 42039752
Alignment:
Q  47 aaaaagcttctttttgggttttctcttaggattcat--tgagagtgtgggtgacttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaa 143  Q
    ||||| |||| ||||  |||||||||||||||||||  || ||| |||||||||   |||| || ||||||||| || ||||| || ||| |||||||||    
T  42039563 aaaaaacttccttttatgttttctcttaggattcatattgtgagagtgggtgacac-aaaatgggtagaaattaggtcttgtttttgtgtaagcttgcaa 42039661  T
Q  144 gctaattt-cttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattggaccgaact 234  Q
    |||||||| |||||||| | || ||| |||||| ||| || |||||| |||||||||| |||||| || | |||||||||||||||||||||    
T  42039662 gctaattttcttgtaactc-ttcgtaacactttcatcatagtggattagagagctgctctctcccacagattaggtcatattggaccgaact 42039752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 25398621 - 25398517
Alignment:
Q  123 ttgttctt-tgtgagcttgcaagctaattt-cttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtca 220  Q
    |||||||| ||| ||||||||||||| ||| |||||||||| |||||| |||||| ||| || ||||||||||||||||| ||||||||| | |||||||    
T  25398621 ttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtca 25398523  T
Q  221 tattgg 226  Q
    ||||||    
T  25398522 tattgg 25398517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 25403759 - 25403655
Alignment:
Q  123 ttgttctt-tgtgagcttgcaagctaattt-cttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtca 220  Q
    |||||||| ||| ||||||||||||| ||| |||||||||| |||||| |||||| ||| || ||||||||||||||||| ||||||||| | |||||||    
T  25403759 ttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtca 25403661  T
Q  221 tattgg 226  Q
    ||||||    
T  25403660 tattgg 25403655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 10445317 - 10445377
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttg 62  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||||||||| |||||    
T  10445317 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttg 10445377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 4 - 344
Target Start/End: Complemental strand, 3278245 - 3277905
Alignment:
Q  4 ttgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttgaa 103  Q
    ||||||||||| ||| |||||||||||||  || ||| |||| ||||| |||| ||| | ||||||||||||| ||||||| ||||||| |||| |||||    
T  3278245 ttgtaaacaccttggatagtgagatttcattataggacggatcaaaaaacttcctttagcgttttctcttagggttcattgtgagtgtgagtgaattgaa 3278146  T
Q  104 aaagga-tagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctat 202  Q
    ||| ||  ||||||     ||||||| ||||||| ||  ||||||||||||| ||||| |||| ||||| | | ||| || | ||| | || | |||| |    
T  3278145 aaatgagaagaaatcggaatttgttc-ttgtgaggttttaagctaatttcttataacctcttt-tatcattctcatcatagtagatcgaagtgatgctct 3278048  T
Q  203 ctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgctttcttatc-ttgttgttttgattatgtttg 300  Q
    |||| |||||||||||||| |||||| ||| || ||  || || ||| ||||||| ||  || ||||  ||||||||| || ||| ||||| ||||||||    
T  3278047 ctcctccatagtaggtcattttggacggaaatgagtaaacaatgttgatgtgttttttccctctctt-atttcttatcttttttgctttgaatatgtttg 3277949  T
Q  301 tggtgatgctttacacttagatttaagtcagtttgttgttgttg 344  Q
    | ||| ||||| |||||||||| ||  ||  |||||||||||||    
T  3277948 tagtgttgcttcacacttagatctagatctatttgttgttgttg 3277905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 3491876 - 3491772
Alignment:
Q  123 ttgttctt-tgtgagcttgcaagctaattt-cttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtca 220  Q
    |||||||| ||| ||||||||||||| ||| |||||||||| |||||| |||||| ||| || ||||||||||||||||| ||||||||| | |||| ||    
T  3491876 ttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggcca 3491778  T
Q  221 tattgg 226  Q
    ||||||    
T  3491777 tattgg 3491772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 122 - 226
Target Start/End: Original strand, 11098896 - 11099002
Alignment:
Q  122 tttgttctt-tgtgagcttgcaagctaat--ttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggt 218  Q
    ||||||||| ||| ||||||||||||| |  |||||||||||| |||||| |||||| ||| || ||||||||||||||||| ||||||||| | ||||     
T  11098896 tttgttcttgtgtaagcttgcaagctattgtttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccccagattaggc 11098994  T
Q  219 catattgg 226  Q
    ||||||||    
T  11098995 catattgg 11099002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 11151746 - 11151670
Alignment:
Q  101 gaaaaaggatagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||| || ||||||||| | |||||||||||||||||||   |||||||||||||||||||| ||||||||||||||    
T  11151746 gaaaatgggtagaaatta-gatttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcactttg 11151670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 142 - 259
Target Start/End: Original strand, 16940200 - 16940318
Alignment:
Q  142 aagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt-ta 240  Q
    |||||||||||||||||  | |||||| |||||| ||| || |||||||||| |||| | | ||||||| | || |||||||||||||||| |||||  |    
T  16940200 aagctaatttcttgtaattcttttgtaacactttcatcatagtggattggagggctgatctttcccccagattatgtcatattggaccgaattgggtcaa 16940299  T
Q  241 ccatattggtgtgtttgtt 259  Q
    | || ||||||||||||||    
T  16940300 caatcttggtgtgtttgtt 16940318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 142 - 259
Target Start/End: Original strand, 17010865 - 17010983
Alignment:
Q  142 aagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt-ta 240  Q
    |||||||||||||||||  | |||||| |||||| ||| || |||||||||| |||| | | ||||||| | || |||||||||||||||| |||||  |    
T  17010865 aagctaatttcttgtaattcttttgtaacactttcatcatagtggattggagggctgatctttcccccagattatgtcatattggaccgaattgggtcaa 17010964  T
Q  241 ccatattggtgtgtttgtt 259  Q
    | || ||||||||||||||    
T  17010965 caatcttggtgtgtttgtt 17010983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 9296400 - 9296476
Alignment:
Q  149 tttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattgg 226  Q
    ||||||||||||| |||||| |||||| ||| || ||||||||||||||||| ||||||||| | |||| ||||||||    
T  9296400 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccccaaattaggccatattgg 9296476  T

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Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 226
Target Start/End: Complemental strand, 14291586 - 14291510
Alignment:
Q  149 tttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattgg 226  Q
    ||||||||||||| |||||| |||||| ||| || ||||||||||||||||| ||||||||| | |||| ||||||||    
T  14291586 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattgg 14291510  T

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Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 210
Target Start/End: Complemental strand, 25407748 - 25407660
Alignment:
Q  123 ttgttctt-tgtgagcttgcaagctaattt-cttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctccccca 210  Q
    |||||||| ||| ||||||||||||| ||| |||||||||| |||||| |||||| ||| || ||||||||||||||||| |||||||||    
T  25407748 ttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctccccca 25407660  T

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Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 130 - 346
Target Start/End: Original strand, 16388449 - 16388667
Alignment:
Q  130 ttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtca-tattggac 228  Q
    ||||||||||  ||||||||||||||||||| |||| |||| || | |||  | ||||  ||||||||||| ||||| | | ||||||||| | ||||||    
T  16388449 ttgtgagcttttaagctaatttcttgtaacctctttctatctctcttatcaaagtggaaaggagagctgctctctcctctagagtaggtcatttttggac 16388548  T
Q  229 cgaactgggt-taccatattggtgtgtttgttttctttcttgctttcttatc-ttgttgttttgattatgtttgtggtgatgctttacacttagatttaa 326  Q
    | ||||||||  || ||||||||||| |||||||| | ||| || ||||||| || ||| ||||  |||| || | ||| ||||| |||| || || ||     
T  16388549 caaactgggtaaacaatattggtgtg-ttgttttcctcctttctctcttatctttattgctttggatatgcttatagtgttgcttcacacatacatctag 16388647  T
Q  327 gtcagtttgttgttgttgct 346  Q
    ||| ||||||||||||||||    
T  16388648 gtctgtttgttgttgttgct 16388667  T

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Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 24398072 - 24398146
Alignment:
Q  104 aaaggatagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||| ||||| ||| | |||||||||||||||||||   |||||||||||||||||||| |||||||| |||||    
T  24398072 aaagggtagaagttaaggtttgttctttgtgagcttgttgaagctaatttcttgtaacccttttgtatctctttg 24398146  T

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Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 11690514 - 11690590
Alignment:
Q  101 gaaaaaggatagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||| || ||||||||| |||| ||||||||||||||||   |||||||||||||||||||| |||||||| |||||    
T  11690514 gaaaatgggtagaaattaggttt-gttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatccctttg 11690590  T

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Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 35215646 - 35215592
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||||||| |||||| ||||||||| | ||||||| |||||||||||||||||    
T  35215646 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggt 35215592  T

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Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 35218023 - 35217969
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||||||| |||||| ||||||||| | ||||||| |||||||||||||||||    
T  35218023 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggt 35217969  T

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Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 42362365 - 42362441
Alignment:
Q  101 gaaaaaggatagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||| || ||||||||| |||| ||||||||||||||||   |||||||||||||||||||| |||||||| |||||    
T  42362365 gaaaatgggtagaaattaggttt-gttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatccctttg 42362441  T

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Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 122 - 176
Target Start/End: Complemental strand, 723879 - 723823
Alignment:
Q  122 tttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    |||||||||||||||||||   |||||||||||||||||||| |||||||| |||||    
T  723879 tttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatccctttg 723823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 40739081 - 40739033
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaa 50  Q
    ||||||||||||| ||| || ||||||||||||||||||||||| ||||    
T  40739081 cattgtaaacaccttgggtaatgagatttcaccattggaaggatcaaaa 40739033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 3491999 - 3491956
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggat 45  Q
    ||||||||||||| ||| |||||||||| |||||||||||||||    
T  3491999 cattgtaaacaccttgggtagtgagattccaccattggaaggat 3491956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 12632725 - 12632622
Alignment:
Q  68 tctcttaggattcattgagagtgtgggtgacttgaaaaa-ggatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttg 166  Q
    |||| |||||||||||  ||||||||||||||||||||| |||||||| ||| | ||||||||| |||||  |  || |||||||||| ||||| |||||    
T  12632725 tctcgtaggattcattt-gagtgtgggtgacttgaaaaatggatagaagttagggtttgttcttggtgag--tctaaactaatttcttttaacctctttg 12632629  T
Q  167 tatcact 173  Q
    || ||||    
T  12632628 taccact 12632622  T

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Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 123 - 175
Target Start/End: Complemental strand, 14633960 - 14633906
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcacttt 175  Q
    ||||||||||||||||||   |||||||||||||||||||| |||||||| ||||    
T  14633960 ttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 14633906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 238
Target Start/End: Complemental strand, 45332238 - 45332187
Alignment:
Q  187 attggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||||||| |||||| ||||||||| | ||||||| |||||||||||||||||    
T  45332238 attggagggctgctctctcccccagactaggtcagattggaccgaactgggt 45332187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 19504406 - 19504352
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||||| |||| |||||||||||||||| | |||||||  ||||||||||||||||    
T  19504406 tggatcggagggctgctatctcccccagactaggtcaatttggaccgaactgggt 19504352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 23452297 - 23452243
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||||||| |||||| ||||||||| | |||||||  ||||||||||||||||    
T  23452297 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggt 23452243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 170
Target Start/End: Complemental strand, 33162584 - 33162535
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatc 170  Q
    ||||||||||||||||||   |||||||||||||||||||| ||||||||    
T  33162584 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatc 33162535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 36558924 - 36558870
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||||| |||| |||||| ||||||||| | ||||||| |||||||||||||||||    
T  36558924 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggt 36558870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 36561201 - 36561147
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||||| |||| |||||| ||||||||| | ||||||| |||||||||||||||||    
T  36561201 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggt 36561147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 176
Target Start/End: Original strand, 11067327 - 11067394
Alignment:
Q  110 tagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||| || |||| |||||||||||||   |||||||||||||||||||| |||||||| |||||    
T  11067327 tagaaatta-gtgttgtactttgtgagcttgtcaaagctaatttcttgtaacccatttgtatctctttg 11067394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 159
Target Start/End: Complemental strand, 14202560 - 14202501
Alignment:
Q  101 gaaaaaggatagaaattatgttttgttctttgtgagcttg--caagctaatttcttgtaac 159  Q
    ||||| || |||||||||||||| ||||||||||||||||   ||||||||||||||||||    
T  14202560 gaaaatgggtagaaattatgttt-gttctttgtgagcttgtttaagctaatttcttgtaac 14202501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 14699128 - 14699189
Alignment:
Q  283 ttgttttgattatgtttgtggtgatgctttacacttagatttaagtcagtttgttgttgttg 344  Q
    ||| |||||||||| |||||||| |||| |||||||||||||| ||| | || |||||||||    
T  14699128 ttgctttgattatgcttgtggtgttgctctacacttagatttaggtctgctttttgttgttg 14699189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 168
Target Start/End: Original strand, 24885694 - 24885742
Alignment:
Q  122 tttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgta 168  Q
    |||||||||||||||||||   |||||||||||||||||||| ||||||    
T  24885694 tttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgta 24885742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 1631866 - 1631811
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||||||||   |||||||| ||||||||||| |||||||| |||||    
T  1631866 ttgttctttgtgagcttgttgaagctaatatcttgtaacccatttgtatctctttg 1631811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 25409878 - 25409842
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattg 38  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  25409878 cattgtaaacaccttgggtagtgagatttcaccattg 25409842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 29867903 - 29867958
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||| ||||   |||||||||||||||||||| |||||||| |||||    
T  29867903 ttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctctttg 29867958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 36773596 - 36773651
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||||||||   |||||||||||||||||| | |||||||| |||||    
T  36773596 ttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttg 36773651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 45726963 - 45727018
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||||||||   |||||||||||||||||||  |||||||| |||||    
T  45726963 ttgttctttgtgagcttgttgaagctaatttcttgtaacctatttgtatctctttg 45727018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 154; Significance: 1e-81; HSPs: 87)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 20 - 316
Target Start/End: Complemental strand, 3047483 - 3047186
Alignment:
Q  20 tagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttgaaaaaggatagaaattat 119  Q
    ||||||||||||| |||||||||||| |||||||||| ||||| ||||| ||||| ||||||||||||||||||||||||| |||| || |||||||||     
T  3047483 tagtgagatttcatcattggaaggatcaaaaagcttccttttgtgttttatcttaagattcattgagagtgtgggtgacttaaaaatgggtagaaattag 3047384  T
Q  120 gttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatct-cccccatagtaggt 218  Q
    || |||||||||||||||||  ||| | |||||||||||| | |||||| |||||| ||  || ||||||||| | | ||| ||| |||||| || ||||    
T  3047383 gtcttgttctttgtgagcttttaagttgatttcttgtaactcatttgtaccactttcatattagtggattggataacggctctctccccccagagcaggt 3047284  T
Q  219 catattggaccgaactgggttaccatattggtgtgtttgttttctttcttgctttcttatcttgttgttttgattatgtttgtggtgatgctttacac 316  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| ||||||||||    
T  3047283 catattggaccgaactgggttacgatcttggtgtgtttgttttctttcttgctttattatcttgttgatttgattatgcttgtggtgttgctttacac 3047186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 2 - 344
Target Start/End: Complemental strand, 20284336 - 20283992
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||  ||    
T  20284336 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcattgagagtgtgggtgatatg 20284237  T
Q  102 -aaaaaggatagaaattatgttttgttc-tttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgc 199  Q
     ||||||| ||||||||| |  |||||| ||||| |||||  ||||||||||||||||| | | ||||| |||||| ||| || |||||||||| |||||    
T  20284236 aaaaaagggtagaaattaggacttgttcttttgtaagcttataagctaatttcttgtaa-cgcattgtaacactttcatcttagtggattggagggctgc 20284138  T
Q  200 tatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgattatg 296  Q
    | ||||||||| | |||||||||||||||||||||||||  || || |||||||||||| || ||||||| | ||||||||| || ||| ||||||||||    
T  20284137 tctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttg-ttcctttctttcatttcttatctttattgctttgattatg 20284039  T
Q  297 tttgtggtgatgctttacacttagatttaagtcagtttgttgttgttg 344  Q
     |||||||| |||| |||||||||||||| ||| |||| |||||||||    
T  20284038 cttgtggtgttgctctacacttagatttaggtctgttt-ttgttgttg 20283992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 2 - 240
Target Start/End: Original strand, 5817120 - 5817358
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    ||||||||| ||| |||  ||||||||||||||||||||||||| |||||||||| ||||| ||||| ||||||||||||||||||||||| ||||||||    
T  5817120 cattgtaaataccttggggagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttttcttaggattcattgagagtgtgagtgacttg 5817219  T
Q  102 aaaaa-ggatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgct 200  Q
    ||||| |||||||||||| |||||||||||||||||||   | || ||||||||||||||||||||||||||||| ||  || |||||||||||||||||    
T  5817220 aaaaatggatagaaattaggttttgttctttgtgagctcttatgcaaatttcttgtaacccctttgtatcactttcatattagtggattggagagctgct 5817319  T
Q  201 atctcccccatagtaggtcatattggaccgaactgggtta 240  Q
     ||| ||||| |||||||||||||||||||||||| ||||    
T  5817320 ctct-ccccagagtaggtcatattggaccgaactgagtta 5817358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 2 - 348
Target Start/End: Complemental strand, 29160052 - 29159699
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcat--tgagagtgtgggtgact 99  Q
    ||||||||||||| ||| ||||||||||||| |||||||||||| |||||||||| ||||| |||||||||||||||||||  || ||| |||||||||     
T  29160052 cattgtaaacaccttgggtagtgagatttcaacattggaaggatcaaaaagcttccttttgtgttttctcttaggattcatattgtgagagtgggtgaca 29159953  T
Q  100 tgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctg 198  Q
      |||| || ||||||||| || |||||||| ||| |||||| |||||||||||||||||| | |||||| |||||| ||| || |||||||||||||||    
T  29159952 caaaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctg 29159853  T
Q  199 ctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgattat 295  Q
    || ||||||| | | |||||||||||||||||||||||||  || || |||||||||||| || || |||| | || |||||| || ||| |||||||||    
T  29159852 ctctctcccctagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttg-ttcctctctttcattgcttatctttattgctttgattat 29159754  T
Q  296 gtttgtggtgatgctttacacttagatttaagtcag--tttgttgttgttgcttg 348  Q
    | |||||||| |||| |||||||||||||| ||| |  |||||||||||||||||    
T  29159753 gcttgtggtgttgctctacacttagatttaggtctgtttttgttgttgttgcttg 29159699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 2 - 350
Target Start/End: Complemental strand, 2580637 - 2580282
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    ||||||||||||| ||| ||||||||||||||||||| |||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||  ||    
T  2580637 cattgtaaacaccttgggtagtgagatttcaccattgaaaggatcaaaaagcttccttttgtgttttctcttaggattcattgagagtgtgggtgatatg 2580538  T
Q  102 aaaaa-ggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgc 199  Q
    ||||| || |||||| || |  |||||||| ||| ||||||||||||| |||||||||| | | ||||| |||||| ||| || ||||||||||||||||    
T  2580537 aaaaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctattttcttgtaa-ctcattgtaacactttcatcttagtggattggagagctgc 2580439  T
Q  200 tatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgt---tttctttcttgctttcttatc-ttgttgttttgatta 294  Q
    | ||||||||| | ||||||||||||||||||| |||||  || || |||||||||||||   | ||||| ||  || |||||| || ||| |||| |||    
T  2580438 tctctcccccagactaggtcatattggaccgaattgggtcaacaatcttggtgtgtttgttcctctcttttttcattgcttatctttattgctttggtta 2580339  T
Q  295 tgtttgtggtgatgctttacacttagatttaagtcag-tttgttgttgttgcttgaa 350  Q
    |  ||||||||   || |||||||||||||| ||| | |||||||||||||||||||    
T  2580338 tacttgtggtgtatctctacacttagatttaggtctgttttgttgttgttgcttgaa 2580282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 6 - 344
Target Start/End: Original strand, 2647551 - 2647891
Alignment:
Q  6 gtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttgaaaa 105  Q
    |||| |||| ||| |||||||||||||||||||||||||| ||||| |||| ||||| |||||||||||||||||||||||||||||||||||   ||||    
T  2647551 gtaagcaccttgggtagtgagatttcaccattggaaggatcaaaaaacttcattttgtgttttctcttaggattcattgagagtgtgggtgac-acaaaa 2647649  T
Q  106 aggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatct 204  Q
     || ||||||||| || |||||||| ||| |||||  |||||||||||||||||| | |||||| |||||| ||| || |||||||||| |||||| |||    
T  2647650 tgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctct 2647749  T
Q  205 cccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgattatgtttgt 301  Q
    |||||| | ||||||||||||| ||||| |||||  || || ||| |||||||| || ||||||| | || |||||| || ||| |||||||||| ||||    
T  2647750 cccccagaataggtcatattgggccgaattgggtcaacaatcttgatgtgtttg-ttcctttctttcattgcttatctttattgctttgattatgcttgt 2647848  T
Q  302 ggtgatgctttacacttagatttaagtcagtttgttgttgttg 344  Q
    |||| |||| || ||||||||||| ||| |||| |||||||||    
T  2647849 ggtgttgctctaaacttagatttaggtctgttttttgttgttg 2647891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 2 - 348
Target Start/End: Original strand, 9189857 - 9190208
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||||||||| || || |||||||||||||||||||| |||||||||||||  ||    
T  9189857 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttgtgtgttttctcttaggattcattaagagtgtgggtgatatg 9189956  T
Q  102 aaaaa-ggatagaaattatgttttgttctt-tgtgagcttgcaagcta-atttcttgtaacccctttgtatcactttgatcctaatggattggagagctg 198  Q
    ||||| || ||||||||| |  |||||||| ||| |||||||||||||  |||||||||| | | ||||| |||||| ||| || |||||||||||||||    
T  9189957 aaaaatgggtagaaattaggacttgttcttgtgtaagcttgcaagctatttttcttgtaa-ctcattgtaacactttcatcttagtggattggagagctg 9190055  T
Q  199 ctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgattat 295  Q
    || ||||||||| | |||||||||||||||||||||||||  || || |||||||||||| || || |||| | || |||||| || ||| |||| ||||    
T  9190056 ctctctcccccagactaggtcatattggaccgaactgggtcaacaatcttggtgtgtttg-ttcctctctttcattgcttatctttattgctttgtttat 9190154  T
Q  296 gtttgtggtgatgctttacacttagatttaagtcag-tttgttgttgttgcttg 348  Q
    | |||||||| |||| ||||||||||| || ||  | |||||||||||||||||    
T  9190155 gcttgtggtgttgctctacacttagatctaggtttgttttgttgttgttgcttg 9190208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 2 - 344
Target Start/End: Original strand, 46516155 - 46516505
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattga------gagtgtgggt 95  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||||||||| ||||| ||||||||||| |||||||||       | ||||||||    
T  46516155 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttcattttgtgttttctcttaagattcattggtggagtgtgtgtgggt 46516254  T
Q  96 gacttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggaga 194  Q
    |||   |||| || |||||||||||| |||||||| ||| |||||  |||||||||||||||||| | |||||| |||||| ||| || ||||||||||     
T  46516255 gacac-aaaatgggtagaaattatgtcttgttcttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagg 46516353  T
Q  195 gctgctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatct-tgttgttttga 291  Q
    |||||| ||||||| | | |||||||||||||||||||||||||  || || |||||||||||| || ||||||| | ||  |||||| | ||| |||||    
T  46516354 gctgctctctcccctagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttg-ttcctttctttcattgtttatctctattgctttga 46516452  T
Q  292 ttatgtttgtggtgatgctttacacttagatttaagtcagtttgttgttgttg 344  Q
    ||||| || ||||| ||||||||||||||||||||||| |||| |||||||||    
T  46516453 ttatgcttttggtgttgctttacacttagatttaagtctgttttttgttgttg 46516505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 2 - 334
Target Start/End: Original strand, 4796518 - 4796852
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||| ||||||       
T  4796518 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttctttttgtgttttctcttaggattcattgagaatgtaggtgac-ac 4796616  T
Q  102 aaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgct 200  Q
    |||| || || |||| | || |||||||| ||| |||||  |||||||||||||||||| | |||||| || ||| ||| || |||||| ||| ||||||    
T  4796617 aaaatgggtataaatgaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacaatttcatcatagtggatttgagggctgct 4796716  T
Q  201 atctcccccatagtaggtcatattggaccgaactgggtt-accatattggtgtgtttgttttctttct-tgctttcttatc-ttgttgttttgattatgt 297  Q
     ||||||||| | |||||||| ||||||||||||||||| || || |||||||||||| || |||||| |  || |||||| || ||| ||||||||||     
T  4796717 ttctcccccagattaggtcattttggaccgaactgggttaacaatcttggtgtgtttg-ttcctttctctcattgcttatctttattgctttgattatgc 4796815  T
Q  298 ttgtggtgatgctttacacttagatttaagtcagttt 334  Q
    |||||||| |||| |||||||||||||| ||| ||||    
T  4796816 ttgtggtgttgctctacacttagatttaggtctgttt 4796852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 110 - 312
Target Start/End: Original strand, 28617184 - 28617388
Alignment:
Q  110 tagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctccccc 209  Q
    ||||||||| ||||||||||||||||||||  ||||||||||||||||||||| |||||||||||| ||| || ||||||||||||||||| ||||||||    
T  28617184 tagaaattaggttttgttctttgtgagcttttaagctaatttcttgtaaccccattgtatcactttcatcttagtggattggagagctgctctctccccc 28617283  T
Q  210 atagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgctttcttatc-ttgttgttttgattatgtttgtggtgat 307  Q
    | |||||||||||||||||||||||||||  || |||||||||||||||||||||| ||| ||| |||||| |||||| ||||| |||| |||||||| |    
T  28617284 agagtaggtcatattggaccgaactgggtaaacaatattggtgtgtttgttttcttcctttcttgcttatctttgttgctttgaatatgcttgtggtgtt 28617383  T
Q  308 gcttt 312  Q
    |||||    
T  28617384 gcttt 28617388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 3 - 322
Target Start/End: Complemental strand, 56195 - 55872
Alignment:
Q  3 attgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattc---attgagagtgtgggtgact 99  Q
    |||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||   ||||||||||||||||||     
T  56195 attgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttctttttgtgttttctcttaggattcattattgagagtgtgggtgac- 56097  T
Q  100 tgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctg 198  Q
      |||| || ||||||||| || |||||||| ||| |||||  |||||||||||||||||| | |||||| |||||| ||| || |||||||||| ||||    
T  56096 acaaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctg 55997  T
Q  199 ctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatcttgttgttttgattatg 296  Q
    || ||| ||||| | |||||||||||||||||||||||||  |  || ||||||||||||||   || ||| | || ||||||||  || ||||||||||    
T  55996 ctctct-ccccagattaggtcatattggaccgaactgggtcaataatcttggtgtgtttgttcctttccttccattgcttatctttgtgctttgattatg 55898  T
Q  297 tttgtggtgatgctttacacttagat 322  Q
     |||||||| |||| || ||||||||    
T  55897 cttgtggtgttgctctatacttagat 55872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 2 - 325
Target Start/End: Original strand, 33332300 - 33332626
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    ||||||||||| | ||| |||||||||||||||||||||||||| ||||||||||  |||| |||||||||||||| |||||||||||||| |||| |      
T  33332300 cattgtaaacatcttgggtagtgagatttcaccattggaaggatcaaaaagcttccctttgtgttttctcttaggaatcattgagagtgtgcgtga-tac 33332398  T
Q  102 aaaaagga-tagaaattatgttttgttc-tttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgc 199  Q
    ||||| || ||||||||| || |||||| ||||| |||||  |||||||||||||||||| | |||||| |||||| ||| || |||||||||| |||||    
T  33332399 aaaaatgagtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcttagtggattggagggctgc 33332498  T
Q  200 tatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgattatg 296  Q
    | ||||||||| | ||||||||||| || ||||||||||  || || |||||||||||| || ||||||| | || |||||| || ||| ||||||||||    
T  33332499 tctctcccccagattaggtcatattagatcgaactgggtcaacaatcttggtgtgtttg-ttcctttctttcattgcttatctttattgatttgattatg 33332597  T
Q  297 tttgtggtgatgctttacacttagattta 325  Q
     || ||||| |||| ||||||||||||||    
T  33332598 cttatggtgttgctctacacttagattta 33332626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 2 - 348
Target Start/End: Complemental strand, 49091910 - 49091558
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcatt---gagagtgtgggtgac 98  Q
    ||||| ||||||| ||| |||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||   |||||||||||||||    
T  49091910 cattgaaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcattatggagagtgtgggtgac 49091811  T
Q  99 ttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagct 197  Q
       | || || ||||||||| || |||||||| ||| |||||  ||| |||||||||||||| | |||||| |||||| ||| || |||||||||||| |    
T  49091810 -acagaatgggtagaaattaggtcttgttcttgtgtaagcttataaggtaatttcttgtaactcttttgtaacactttcatcatagtggattggagagtt 49091712  T
Q  198 gctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatcttgttgttttgattat 295  Q
    ||| ||| ||||| | |||||||||||||||  ||||||||  || || |||||| ||||| || ||||||| | || ||||||||  || |||||||||    
T  49091711 gctctcttccccagattaggtcatattggactaaactgggtcaacaatcttggtgcgtttg-ttcctttctttcattgcttatctttgtgctttgattat 49091613  T
Q  296 gtttgtggtgatgctttacacttagatttaagtcag--tttgttgttgttgcttg 348  Q
    | |||||||| |||| |||||||| || || ||| |  |||||||||||||||||    
T  49091612 gcttgtggtgttgctctacacttaaatctaggtctgtttttgttgttgttgcttg 49091558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 2 - 348
Target Start/End: Original strand, 23402863 - 23403214
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||| |||||||||| ||||| ||||||||||||||||||||||||||||| ||||  ||    
T  23402863 cattgtaaacaccttgggtagtgagatttcaccattggaatgatcaaaaagcttccttttgtgttttctcttaggattcattgagagtgtgagtgatgtg 23402962  T
Q  102 aaaaa-ggatagaaattatgttttgttc-tttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgc 199  Q
    ||||| || ||||||||| |  |||||| ||||| |||||  ||||||||||||||||| | | ||||| |||||| ||| || | |||||||| |||||    
T  23402963 aaaaatgggtagaaattaggacttgttcttttgtaagcttataagctaatttcttgtaa-ctcattgtaacactttcatcttagtagattggagggctgc 23403061  T
Q  200 tatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttat-cttgttgttttgattatg 296  Q
    |  ||||| || | ||||||||||| ||||||| |||||  || || || ||||||||| || ||||||| | || |||||  || ||| ||||||||||    
T  23403062 tcactccctcagattaggtcatattagaccgaattgggtcaacaatcttagtgtgtttg-ttcctttctttcattgcttatatttattgctttgattatg 23403160  T
Q  297 tttgtggtgatgctttacacttagatttaagtcag--tttgttgttgttgcttg 348  Q
     |||||||| |||| |||||||| ||||| ||| |  |||||||||||||||||    
T  23403161 cttgtggtgttgctctacacttacatttaggtctgtttttgttgttgttgcttg 23403214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 2 - 259
Target Start/End: Complemental strand, 35961064 - 35960804
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcat-tgagagtgtgggtgactt 100  Q
    ||||||||||||| | | |||||||||||||||||||||||||| |||||||||| ||||| ||||||||||| ||||||| |  ||||||||||||  |    
T  35961064 cattgtaaacaccttaggtagtgagatttcaccattggaaggatcaaaaagcttccttttgcgttttctcttaagattcatctttgagtgtgggtgatat 35960965  T
Q  101 gaaaaaggatagaaattatgttttgttc-tttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgc 199  Q
    ||||| || ||||||||| || |||||| ||||| |||||  ||||||||||||| |||| | |||||| |||||| ||| || ||| |||||| |||||    
T  35960964 gaaaatgggtagaaattaggtattgttcttttgtaagcttataagctaatttcttctaactcatttgtaacactttcatcatagtggtttggagggctgc 35960865  T
Q  200 tatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgtt 259  Q
    | ||||||||| | |||||||||||| |||||||| |||  || || ||||||||||||||    
T  35960864 tctctcccccagattaggtcatattgaaccgaactcggtcaacaatcttggtgtgtttgtt 35960804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 2 - 238
Target Start/End: Original strand, 9185024 - 9185252
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||||||||| || || |||||||||||||||||||| |||||||||||||  ||    
T  9185024 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttgtgtgttttctcttaggattcattaagagtgtgggtgatatg 9185123  T
Q  102 aaaaa-ggatagaaattatgttttgttctt-tgtgagcttgcaagcta-atttcttgtaacccctttgtatcactttgatcctaatggattggagagctg 198  Q
    ||||| || ||||||||| |  |||||||| ||| |||||||||||||  ||||||||||           |||||| ||| || ||||||||||||||     
T  9185124 aaaaatgggtagaaattaggacttgttcttgtgtaagcttgcaagctatttttcttgtaa-----------cactttcatcttagtggattggagagctt 9185212  T
Q  199 ctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    || ||||||||| | ||||| |||||||||||||||||||    
T  9185213 ctctctcccccagactaggttatattggaccgaactgggt 9185252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 2 - 348
Target Start/End: Complemental strand, 21983533 - 21983178
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctctt-aggattcat--tgagagtgtgggtgac 98  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| | || ||||| ||||| |||||||||| ||| |||||  |  ||| |||||||||    
T  21983533 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcataa-gcttccttttgtgttttctctttagggttcatattttgagagtgggtgac 21983435  T
Q  99 ttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaaccccttt-gtatcactttgatcctaatggattggagagc 196  Q
       |||| || |||||| || || |||||||| ||| ||||||||||||| ||||||||||| | ||| ||| |||||| ||| || |||||||||||||    
T  21983434 ac-aaaatgggtagaaactaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactctttttgtaacactttcatcatagtggattggagagc 21983336  T
Q  197 tgctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatct-tgttgttttgatt 293  Q
    |||| ||||||||| | |||||||||||||||||||||||||  || || | ||||  ||||||   |||||| | || ||||||| | ||| |||||||    
T  21983335 tgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctcggtgcatttgttccttttctttcgttgcttatctctattgctttgatt 21983236  T
Q  294 atgtttgtggtgatgctttacacttagatttaagtc---agtttgttgttgttgcttg 348  Q
    |||||||||||| |||| |||||  ||||||| |||   |||||||||||||||||||    
T  21983235 atgtttgtggtgttgctctacacccagatttaggtctggagtttgttgttgttgcttg 21983178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 9235432 - 9235591
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    ||||||||||||| ||| |||||| |||||||||||| |||||| |||||||||| ||||| ||||||||||||||||| ||||||||| ||||||  ||    
T  9235432 cattgtaaacaccttggatagtgatatttcaccattgcaaggatcaaaaagcttccttttgtgttttctcttaggattcgttgagagtgcgggtgatatg 9235531  T
Q  102 aaaaa-ggatagaaattatgttttgttc-tttgtgagcttgcaagctaatttcttgtaac 159  Q
    ||||| || ||||||||| |  |||||| ||||| |||||  ||||||||||||||||||    
T  9235532 aaaaatgggtagaaattaggacttgttcttttgtaagcttataagctaatttcttgtaac 9235591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 348
Target Start/End: Complemental strand, 21989155 - 21988802
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctctt-aggattcat--tgagagtgtgggtgac 98  Q
    ||||||||||||| ||| ||||||||||| |||||||||||||| | || ||||| |||   |||||||||| ||| |||||  |   || |||||||||    
T  21989155 cattgtaaacaccttgggtagtgagattttaccattggaaggatcataa-gcttcctttattgttttctctttagggttcatatttttagagtgggtgac 21989057  T
Q  99 ttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaaccccttt-gtatcactttgatcctaatggattggagagc 196  Q
       |||| || |||||| || ||||| ||||| | | ||||||||| ||| ||||||||||| | ||| ||| |||||| |||  | ||||||||||||     
T  21989056 ac-aaaatgggtagaaactaggttttattcttgtataagcttgcaatctattttcttgtaactctttttgtaacactttcatcaaagtggattggagagt 21988958  T
Q  197 tgctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgatt 293  Q
    ||||  |||| ||| | |||||||||||||||||||||||||  || || | ||||||||||||   |||||| | || |||||| || ||| |||||||    
T  21988957 tgct--ctcctccagattaggtcatattggaccgaactgggtcaacaatctcggtgtgtttgttccttttctttcattgcttatctttattgctttgatt 21988860  T
Q  294 atgtttgtggtgatgctttacacttagatttaagtc---agtttgttgttgttgcttg 348  Q
    |||||||||||| |||| |||||  ||||||| |||   |||||||||||||||||||    
T  21988859 atgtttgtggtgttgctctacacccagatttaggtctggagtttgttgttgttgcttg 21988802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 110 - 238
Target Start/End: Original strand, 44848643 - 44848771
Alignment:
Q  110 tagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccc 208  Q
    ||||||||| || || ||||| ||| ||||||||||||  ||||||||||| | |||||| |||||| ||| || ||||||||||||||||| |||||||    
T  44848643 tagaaattaggtcttattcttgtgtaagcttgcaagcttttttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctctctcccc 44848741  T
Q  209 catagtaggtcatattggaccgaactgggt 238  Q
    ||   |||||||||||| ||||||||||||    
T  44848742 caggttaggtcatattgaaccgaactgggt 44848771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 238
Target Start/End: Complemental strand, 47263913 - 47263688
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctctt-aggattcatt---gagagtgtgggtga 97  Q
    ||||||||| ||| ||| |||||||||||||||||||||||||| |||| ||||| ||||| || |||| || ||| ||||||   ||||| |||||  |    
T  47263913 cattgtaaataccttgggtagtgagatttcaccattggaaggatcaaaa-gcttccttttgtgtcttctatttagggttcattattgagagagtgggaaa 47263815  T
Q  98 cttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagc 196  Q
    |    ||| |||||||||||| || |||||||| ||| ||||||||||||| |||||| ||||           ||||| ||| || |||||||||||||    
T  47263814 cac--aaatggatagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttataac-----------actttcatcatagtggattggagagc 47263728  T
Q  197 tgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||||  |||||||||| |||||||||||||||||||||||||    
T  47263727 tgct--ctcccccatattaggtcatattggaccgaactgggt 47263688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 238
Target Start/End: Complemental strand, 2479583 - 2479347
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctctt-aggattcatt---gagagtgtgggtga 97  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||| ||||| ||||   | ||||||| ||| ||||||   ||||| |||||  |    
T  2479583 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaa-gcttccttttatatcttctctttagggttcattattgagagagtgggaaa 2479485  T
Q  98 cttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagc 196  Q
    |    | | || ||||||||| || |||||||| ||| ||||||||||||| |||||| |||| | |||||| |||||| ||| || |||||| ||||||    
T  2479484 cac--acatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttataactc-tttgtaacactttcatcatagtggatttgagagc 2479388  T
Q  197 tgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||| || |||| | | |||||||||||| ||||||||||||    
T  2479387 tgctctc-cccctagattaggtcatattgaaccgaactgggt 2479347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 149 - 317
Target Start/End: Complemental strand, 18408861 - 18408693
Alignment:
Q  149 tttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggttacca---ta 245  Q
    ||||||||||||| |||||| |||||| ||| || ||||||||||||||||| ||||||||| | |||| |||||||| | ||||||||| | ||   |     
T  18408861 tttcttgtaaccc-tttgtaacactttcatcatactggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 18408764  T
Q  246 ttggtgtgtttgttttctttcttgctttcttatcttg-ttgttttgattatgtttgtggtgatgctttacact 317  Q
    ||||||||||||  ||||||||| ||| ||||||||| ||| ||||  | ||||||||||| |||| ||||||    
T  18408763 ttggtgtgtttg--ttctttctttcttgcttatcttgtttgctttgtatttgtttgtggtgttgctctacact 18408693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 135 - 272
Target Start/End: Original strand, 1533427 - 1533570
Alignment:
Q  135 agcttgcaagctaat--ttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattggaccgaa 232  Q
    ||||||||||||| |  |||||||||||| |||||| |||||| ||| || |||||||||||| |||| ||||||||| | |||| |||||||| | |||    
T  1533427 agcttgcaagctattgtttcttgtaaccc-tttgtaacactttcatcatattggattggagagatgctctctcccccagattaggccatattgg-ctgaa 1533524  T
Q  233 ctgggttacca----tattggtgtgtttgt--tttctttcttgctt 272  Q
    |||||| | ||    |||||||||||||||  ||||||||||||||    
T  1533525 ctgggtcaacaatcttattggtgtgtttgttctttctttcttgctt 1533570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 7351712 - 7351658
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||||||| |||||| ||||||||||| ||||||| |||||||||||||||||    
T  7351712 tggattggagggctgctctctcccccatactaggtcagattggaccgaactgggt 7351658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 64 - 157
Target Start/End: Original strand, 45685657 - 45685751
Alignment:
Q  64 gttttctcttaggattcattgagagtgtgggtgacttgaaaaa-ggatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgta 157  Q
    ||||||||||||||||||||| || | || ||||||| ||||| |||||||||||| | |||||||||||| ||||||  | |||| ||||||||    
T  45685657 gttttctcttaggattcattgcgactttgagtgacttaaaaaatggatagaaattaaggtttgttctttgtcagcttgagatctaagttcttgta 45685751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 226
Target Start/End: Complemental strand, 2058063 - 2057987
Alignment:
Q  149 tttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattgg 226  Q
    ||||||||||||| |||||| |||||| ||| || ||||||||||||||||| ||||||||| | |||| ||||||||    
T  2058063 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattgg 2057987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 21639934 - 21639830
Alignment:
Q  123 ttgttctt-tgtgagcttgcaagctaattt-cttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtca 220  Q
    |||||||| ||| ||||||||||||| ||| |||||||||| |||||| |||||| ||  || ||||||||||||||||| ||||||||| | |||| ||    
T  21639934 ttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcattatagtggattggagagctgctctctcccccagattaggcca 21639836  T
Q  221 tattgg 226  Q
    ||||||    
T  21639835 tattgg 21639830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 21640057 - 21640014
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggat 45  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||    
T  21640057 cattgtaaacaccttgggtagtgagatttcaccattggaaggat 21640014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 21646255 - 21646212
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggat 45  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||    
T  21646255 cattgtaaacaccttgggtagtgagatttcaccattggaaggat 21646212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 31155971 - 31155917
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||||||| |||||| ||||||||| | ||||||| |||||||||||||||||    
T  31155971 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggt 31155917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 238
Target Start/End: Original strand, 21369769 - 21369818
Alignment:
Q  190 ggagagctgctatctcccccatagtaggtcat-attggaccgaactgggt 238  Q
    ||||||||||| ||||| |||||||||||||| |||||||||||||||||    
T  21369769 ggagagctgctctctccgccatagtaggtcatcattggaccgaactgggt 21369818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 101 - 159
Target Start/End: Complemental strand, 24526052 - 24525992
Alignment:
Q  101 gaaaaaggatagaaattatgttttgttctttgtgagcttg--caagctaatttcttgtaac 159  Q
    ||||| || ||||||||| |||||||||||||||||||||   ||||||||||||||||||    
T  24526052 gaaaatgggtagaaattaggttttgttctttgtgagcttgtcaaagctaatttcttgtaac 24525992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 2390316 - 2390371
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||||||||   |||||||||||||||||||| |||||||| |||||    
T  2390316 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttg 2390371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 6432005 - 6432060
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||||||||   |||||||||||||||||||| |||||||| |||||    
T  6432005 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttg 6432060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 18126678 - 18126733
Alignment:
Q  123 ttgttctttgtgagcttg--caagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||| ||||  ||||||||||||||||||||| |||||||| |||||    
T  18126678 ttgttctttgtgaacttgttcaagctaatttcttgtaacccatttgtatctctttg 18126733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 18413884 - 18413844
Alignment:
Q  5 tgtaaacaccctggttagtgagatttcaccattggaaggat 45  Q
    |||||||||| ||| ||||||||||||||||||||||||||    
T  18413884 tgtaaacaccttgggtagtgagatttcaccattggaaggat 18413844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 22270007 - 22270062
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||||||||   |||||||||||||||||||| |||||||| |||||    
T  22270007 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttg 22270062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 31733103 - 31733048
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||||||||   |||||||||||||||||||| |||||||| |||||    
T  31733103 ttgttctttgtgagcttggtgaagctaatttcttgtaacccatttgtatctctttg 31733048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 44847975 - 44848015
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaag 42  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  44847975 cattgtaaacaccttggatagtgagatttcaccattggaag 44848015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 4162728 - 4162786
Alignment:
Q  110 tagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtat 169  Q
    ||||||||||| ||||||||||||||| ||| || ||| |||||||||||| ||||||||    
T  4162728 tagaaattatgatttgttctttgtgag-ttggaatctactttcttgtaaccactttgtat 4162786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 195 - 238
Target Start/End: Complemental strand, 4295983 - 4295940
Alignment:
Q  195 gctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||||||||||||||| |||||||  ||||||||||||||||    
T  4295983 gctgctatctcccccatactaggtcaatttggaccgaactgggt 4295940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 149 - 208
Target Start/End: Complemental strand, 18413737 - 18413679
Alignment:
Q  149 tttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccc 208  Q
    ||||||||||||| |||||| |||||| ||| || ||||||||||||||||| |||||||    
T  18413737 tttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccc 18413679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 22328544 - 22328470
Alignment:
Q  104 aaaggatagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||| |||||||||   |||||||||||||||||||   |||||||||||||||||| | |||||||| |||||    
T  22328544 aaaggttagaaattagagtttgttctttgtgagcttgttgaagctaatttcttgtaactcttttgtatctctttg 22328470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 122 - 176
Target Start/End: Complemental strand, 41649145 - 41649090
Alignment:
Q  122 tttgttctttgtgagcttgca-agctaatttcttgtaacccctttgtatcactttg 176  Q
    |||||||||||||||||||   ||||||||||||||||||| |||||||| |||||    
T  41649145 tttgttctttgtgagcttgtttagctaatttcttgtaacccatttgtatccctttg 41649090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 1046985 - 1046931
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||||||| |||||| ||||||||| | |||||||  ||||||||||||||||    
T  1046985 tggattggagggctgctctctcccccacactaggtcaatttggaccgaactgggt 1046931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 1049356 - 1049302
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||||||| |||||| ||||||||| | |||||||  ||||||||||||||||    
T  1049356 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggt 1049302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 1113670 - 1113746
Alignment:
Q  101 gaaaaaggatagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||| |||||||||||| | || ||||||||||||||||   ||||||||||||| |||||| |||||||| |||||    
T  1113670 gaaaatggatagaaattagggtt-gttctttgtgagcttgttgaagctaatttcttataacccatttgtatctctttg 1113746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 1850210 - 1850264
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||||| |||| |||||| ||||||||||| |||||||  ||||||||||||||||    
T  1850210 tggatcggagggctgctctctcccccatactaggtcaatttggaccgaactgggt 1850264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 2935497 - 2935551
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||||| |||| |||||| ||||||||| | ||||||| |||||||||||||||||    
T  2935497 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggt 2935551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 3035953 - 3036007
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||||||| |||||| ||||||||| | |||||||  ||||||||||||||||    
T  3035953 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggt 3036007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 140
Target Start/End: Complemental strand, 5514156 - 5514126
Alignment:
Q  110 tagaaattatgttttgttctttgtgagcttg 140  Q
    |||||||||||||||||||||||||||||||    
T  5514156 tagaaattatgttttgttctttgtgagcttg 5514126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 9027254 - 9027200
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||||| |||| |||||| ||||||||| | ||||||| |||||||||||||||||    
T  9027254 tggataggagggctgctctctcccccagactaggtcagattggaccgaactgggt 9027200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 14069988 - 14069912
Alignment:
Q  101 gaaaaaggatagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    |||||||| ||||||||| | || ||||||||||| ||||   |||||||||||||||||||| |||||||| |||||    
T  14069988 gaaaaagggtagaaattagggtt-gttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctctttg 14069912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 14380016 - 14379940
Alignment:
Q  101 gaaaaaggatagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    |||||||| ||||||||| | || ||||||||||| ||||   |||||||||||||||||||| |||||||| |||||    
T  14380016 gaaaaagggtagaaattagggtt-gttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctctttg 14379940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 20297591 - 20297645
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||||||| |||||| ||||||||| | |||||||  ||||||||||||||||    
T  20297591 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggt 20297645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 160
Target Start/End: Original strand, 20343911 - 20343969
Alignment:
Q  103 aaaaggatagaaattatgttttgttctttgtgagcttg-caagctaatttcttgtaacc 160  Q
    |||||| ||||||||| | ||||||| |||||| |||| ||||||||||||||||||||    
T  20343911 aaaagggtagaaattagggtttgttcattgtgaacttgtcaagctaatttcttgtaacc 20343969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 22108295 - 22108349
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||||| |||| |||||| ||||||||| | ||||||| |||||||||||||||||    
T  22108295 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggt 22108349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 22137306 - 22137360
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||||| |||| |||||| ||||||||| | ||||||| |||||||||||||||||    
T  22137306 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggt 22137360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 130
Target Start/End: Original strand, 23580827 - 23580893
Alignment:
Q  64 gttttctcttaggattcattgagagtgtgggtgacttgaaaaaggatagaaattatgttttgttctt 130  Q
    ||||||||||| ||| ||||| | || || |||||||||||| |||||||||||| | |||||||||    
T  23580827 gttttctcttatgatccattgtgggtttgagtgacttgaaaatggatagaaattaaggtttgttctt 23580893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 35853927 - 35854003
Alignment:
Q  101 gaaaaaggatagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    |||||||| ||||||||| | || ||||||||||| ||||   |||||||||||||||||||| |||||||| |||||    
T  35853927 gaaaaagggtagaaattagggtt-gttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttg 35854003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 40550055 - 40550109
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||||| |||| |||||| ||||||||| | ||||||| |||||||||||||||||    
T  40550055 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggt 40550109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 40552333 - 40552387
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||||| |||| |||||| ||||||||| | ||||||| |||||||||||||||||    
T  40552333 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggt 40552387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 4178808 - 4178864
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttga 177  Q
    ||||||||||||| ||||   |||||||||||||||||||| |||||||| ||||||    
T  4178808 ttgttctttgtgaacttgggaaagctaatttcttgtaacccttttgtatctctttga 4178864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 4253676 - 4253608
Alignment:
Q  110 tagaaattatgttttgttctttgtgagcttg--caagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||| | |||||||||||||||||||   ||||||||||| |||||||| ||| |||| |||||    
T  4253676 tagaaattagggtttgttctttgtgagcttgttgaagctaatttcatgtaacccttttatatctctttg 4253608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 6067253 - 6067204
Alignment:
Q  190 ggagagctgctatctcccccatagtaggtca-tattggaccgaactgggt 238  Q
    ||||||||||| ||||||||||| ||||||| |||||||||| |||||||    
T  6067253 ggagagctgctctctcccccatactaggtcagtattggaccggactgggt 6067204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 20357547 - 20357622
Alignment:
Q  149 tttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattgg 226  Q
    ||||||||||||| |||||| ||||||  || || ||||||||||||||||| ||||||||| | |||| ||||||||    
T  20357547 tttcttgtaaccc-tttgtaacactttc-tcatattggattggagagctgctctctcccccaaattaggccatattgg 20357622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 21646132 - 21646028
Alignment:
Q  123 ttgttctt-tgtgagcttgcaagctaattt-cttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtca 220  Q
    |||||||| ||| ||||||||||||| ||| |||||||||| ||| || |||||| ||| || ||||||||||||||||| ||| ||| | | |||| ||    
T  21646132 ttgttcttgtgtaagcttgcaagctatttttcttgtaaccctttt-taacactttcatcatagtggattggagagctgctctcttccctagattaggcca 21646034  T
Q  221 tattgg 226  Q
    ||||||    
T  21646033 tattgg 21646028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 23343989 - 23344049
Alignment:
Q  103 aaaaggatagaaattatgttttgttctttgtgagcttg--caagctaatttcttgtaaccc 161  Q
    |||||| ||||||||| | ||| |||||||||||||||   ||||||||||||||||||||    
T  23343989 aaaagggtagaaattaaggtttattctttgtgagcttgttgaagctaatttcttgtaaccc 23344049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 23565208 - 23565140
Alignment:
Q  110 tagaaattatgttttgttctttgtgagcttg--caagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||| || ||||||||||||||||||   || ||||||||||||||| | |||||||| |||||    
T  23565208 tagaaattaggtcttgttctttgtgagcttgttgaaactaatttcttgtaactcttttgtatctctttg 23565140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 36574663 - 36574595
Alignment:
Q  110 tagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||| | ||||||||||||||| |||   |||||||||||||||||||| ||| |||| |||||    
T  36574663 tagaaattaagatttgttctttgtgagtttgttgaagctaatttcttgtaacccttttatatctctttg 36574595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 48491613 - 48491669
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttga 177  Q
    ||||||||||||| ||||   |||||||||||||||||||| |||||||| ||||||    
T  48491613 ttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttga 48491669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 2361106 - 2361051
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||||||||   |||||||||||||||||| | |||||||| |||||    
T  2361106 ttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttg 2361051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 4508840 - 4508785
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    |||||||||||||||||    |||||||||||||||||||| |||||||| |||||    
T  4508840 ttgttctttgtgagcttattgaagctaatttcttgtaacccatttgtatctctttg 4508785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 232
Target Start/End: Complemental strand, 7349333 - 7349285
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaa 232  Q
    |||||||||| |||||| ||||||||| | ||||||| |||||||||||    
T  7349333 tggattggagggctgctctctcccccagactaggtcagattggaccgaa 7349285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 21592197 - 21592149
Alignment:
Q  190 ggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||| |||||| ||||||||||| |||||||  ||||||||||||||||    
T  21592197 ggagggctgctctctcccccatactaggtcaatttggaccgaactgggt 21592149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 26417350 - 26417405
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||||||||   ||| |||||||||||||||| |||||||| |||||    
T  26417350 ttgttctttgtgagcttgttgaagataatttcttgtaacccatttgtatctctttg 26417405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 27347851 - 27347906
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||| ||||   |||||||||||||||||||| |||||||| |||||    
T  27347851 ttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttg 27347906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 101
Target Start/End: Complemental strand, 27984668 - 27984632
Alignment:
Q  65 ttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  27984668 ttttctctaaggattcattgtgagtgtgggtgacttg 27984632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 29608771 - 29608826
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||||||||   |||||||||||||||||| | |||||||| |||||    
T  29608771 ttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttg 29608826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 30024866 - 30024811
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    |||||| |||||||||||   |||||||||||||||||||| |||||||| |||||    
T  30024866 ttgttcattgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttg 30024811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 170
Target Start/End: Complemental strand, 31105548 - 31105478
Alignment:
Q  101 gaaaaaggatagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatc 170  Q
    ||||| || |||||||||  |||| |||||||||||||||   |||||||||||||||||||| ||||||||    
T  31105548 gaaaatgggtagaaattagatttt-ttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatc 31105478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 32358188 - 32358133
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    |||| |||||||||||||   |||||||||||||||||||| |||||||| |||||    
T  32358188 ttgtgctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttg 32358133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 38671356 - 38671301
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||||||||   |||||||||| ||||||| | ||||||||||||||    
T  38671356 ttgttctttgtgagcttgtttaagctaatttattgtaacacatttgtatcactttg 38671301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 41317568 - 41317513
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||||||||   ||||||||||||||||| || |||||||| |||||    
T  41317568 ttgttctttgtgagcttgtcaaagctaatttcttgtaatccatttgtatccctttg 41317513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 47674077 - 47674022
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||| ||||   |||||||||||||||||||| |||||||| |||||    
T  47674077 ttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttg 47674022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 48599468 - 48599413
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||||||||   |||||||||||||||||| | |||||||| |||||    
T  48599468 ttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttg 48599413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 154; Significance: 1e-81; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 2 - 326
Target Start/End: Original strand, 7160754 - 7161078
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    |||||||| |||| |||  |||||||||||| |||||||||||| |||||||||| ||||  |||||||||||||||||||||||||||| | ||||||     
T  7160754 cattgtaatcaccttggacagtgagatttcatcattggaaggatcaaaaagcttcattttatgttttctcttaggattcattgagagtgtag-tgactta 7160852  T
Q  102 aaaaagga-tagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgct 200  Q
    |||||    ||||||||| || |||||||||||||||||  || ||||||| ||||||||||||||||||||||| |||  | ||||||||||||||| |    
T  7160853 aaaaatatgtagaaattaagtcttgttctttgtgagctttaaatctaattttttgtaacccctttgtatcactttcatctgagtggattggagagctgat 7160952  T
Q  201 atctcccccatagtaggtcatattggaccgaactgggttaccatattggtgtgtttgttttctttcttgctttcttatcttgttgttttgattatgtttg 300  Q
     ||||||| |||||||||||||||| | | |||||| ||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||  ||    
T  7160953 ctctcccctatagtaggtcatattgaatcaaactggattaccattttggtgtgtttgttttctttcttgctttcttattttgttgctttgattatgcctg 7161052  T
Q  301 tggtgatgctttacacttagatttaa 326  Q
    ||||| |||||||||| ||| |||||    
T  7161053 tggtgttgctttacacatagttttaa 7161078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 2 - 348
Target Start/End: Original strand, 11181682 - 11182035
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    ||||||||||||| ||| |||||| ||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||| ||||||||||||| ||    
T  11181682 cattgtaaacaccttgggtagtgaaatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcattgtgagtgtgggtgacatg 11181781  T
Q  102 aaaaaggatagaaattatgttttgttc-tttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgct 200  Q
    |||| || ||||||||| || |||||| |||| ||||||  | |||||||||||||||| | ||||||||||||| ||| || |||||||||| | ||||    
T  11181782 aaaatgggtagaaattaggtcttgttcatttgagagcttttaggctaatttcttgtaactcatttgtatcactttcatcttagtggattggagggttgct 11181881  T
Q  201 atctccccc-atagtaggtcatattggaccgaactgggttaccatattggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgattatgt 297  Q
     |||||||| | ||||||||||||| ||||||||| ||||||||| |||||||||||| ||  |||||| | || |||||| || ||| ||||||||||     
T  11181882 ctctccccctagagtaggtcatattagaccgaactaggttaccatcttggtgtgtttg-ttcatttctttcattgcttatctttattgctttgattatgc 11181980  T
Q  298 ttgtggtgatgctttacacttagatttaagtcag----tttgttgttgttgcttg 348  Q
    |||||||  |||| |||||||||||||||||| |    |||||||||||||||||    
T  11181981 ttgtggtattgctctacacttagatttaagtctgtttttttgttgttgttgcttg 11182035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 2 - 350
Target Start/End: Complemental strand, 28832504 - 28832154
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||  ||    
T  28832504 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcattgagagtgtgggtgatatg 28832405  T
Q  102 aaaaa-ggatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgct 200  Q
    ||||| || |||||||||    ||||||||| ||  |||  ||||||||||||||||| | | ||||| |||||| ||| || |||||||||| ||||||    
T  28832404 aaaaatgggtagaaattagaacttgttcttt-tgtacttataagctaatttcttgtaa-ctcattgtaacactttcatcttagtggattggagggctgct 28832307  T
Q  201 atctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgattatgt 297  Q
     ||||||||| | |||||||||||||||||||| ||||  || || |||||||||||| ||| |||||| | || |||||| || ||| ||||||||||     
T  28832306 ctctcccccagattaggtcatattggaccgaaccgggtcaacaatcttggtgtgtttg-tttgtttctttcattgcttatctttattgatttgattatgc 28832208  T
Q  298 ttgtggtgatgctttacacttagatttaagtcag--tttgttgttgttgcttgaa 350  Q
    |||||||| |||| |||||||||| ||| ||| |  |||||||||||||||||||    
T  28832207 ttgtggtgttgctctacacttaga-ttaggtctgtttttgttgttgttgcttgaa 28832154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 8 - 348
Target Start/End: Original strand, 42127266 - 42127610
Alignment:
Q  8 aaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttgaaaaa- 106  Q
    ||||||| ||| |||||||||||||||||||||||||| |||||||||  ||||| ||||||||||||||||||||||||||||||||||  |||||||     
T  42127266 aaacaccttgggtagtgagatttcaccattggaaggatcaaaaagctttcttttgtgttttctcttaggattcattgagagtgtgggtgatatgaaaaat 42127365  T
Q  107 ggatagaaattatgttttgttc-tttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctc 205  Q
    || |||||| || |  |||||| ||||| |||||  ||||||||||||||||| | | ||||| |||||| ||| || |||||||| | |||||| ||||    
T  42127366 gggtagaaagtaggacttgttcttttgtaagcttataagctaatttcttgtaa-ctcattgtaacactttcatcttagtggattggggggctgctctctc 42127464  T
Q  206 ccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgattatgtttgtg 302  Q
    ||||| | ||||||||||| || ||||||||||  || || |||||||||||| || ||||||| | || |||||| || |||||||||||||| |||||    
T  42127465 ccccagattaggtcatattagatcgaactgggtcaacaatcttggtgtgtttg-ttcctttctttcattgcttatctttattgttttgattatgcttgtg 42127563  T
Q  303 gtgatgctttacacttagatttaagtcag-tttgttgttgttgcttg 348  Q
    ||| |||| |||| ||||||||||||| | |||||||||||||||||    
T  42127564 gtgttgctctacaattagatttaagtctgttttgttgttgttgcttg 42127610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 20 - 325
Target Start/End: Complemental strand, 2630460 - 2630152
Alignment:
Q  20 tagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttgaaaaagg-atagaaatta 118  Q
    |||||| |||||||||||| |||||| |||||||||| ||| | ||||||||||||||||||||| ||||| ||||||||||||||| | ||| ||||||    
T  2630460 tagtgaaatttcaccattgaaaggatcaaaaagcttcctttagtgttttctcttaggattcattgtgagtgagggtgacttgaaaaatgtataaaaatta 2630361  T
Q  119 tgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggt 218  Q
     ||||||||||||||| | ||  |||||||||| ||||||||| ||||||||||||| ||| || ||||||| |||||||||||||||| || || ||||    
T  2630360 ggttttgttctttgtgtgtttttaagctaatttattgtaacccttttgtatcactttcatcatagtggattgaagagctgctatctccctcaaagcaggt 2630261  T
Q  219 catattggaccgaactgggtt-accatattggtgtgtttgttttctt-tcttgctttcttatct-tgttgttttgattatgtttgtggtgatgctttaca 315  Q
    |||||||||||||||| |||| || |||||| || ||||||||| || |||| | ||||||||| | ||| ||| | |||| |||||||| |||| | ||    
T  2630260 catattggaccgaactaggttaacaatattgatgcgtttgttttattctctt-ccttcttatctctattgctttaaatatgcttgtggtgttgctctgca 2630162  T
Q  316 cttagattta 325  Q
    ||||||||||    
T  2630161 cttagattta 2630152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 23 - 240
Target Start/End: Complemental strand, 6742076 - 6741860
Alignment:
Q  23 tgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttgaaaaagga-tagaaattatgt 121  Q
    |||||||||||||||| ||| || |||||| |||| | ||  |||| ||||||||||||||||||||||||||||||||||||| || ||||||||| ||    
T  6742076 tgagatttcaccattgaaagaatcaaaaagattctctgtg--ttttttcttaggattcattgagagtgtgggtgacttgaaaaatgagtagaaattaggt 6741979  T
Q  122 tttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcat 221  Q
    ||||||||||||||| ||||||||||||||||||||||  |||||||||||||  ||| |||||||||||||||||||| | ||||||| |||| |||||    
T  6741978 tttgttctttgtgagtttgcaagctaatttcttgtaacttctttgtatcacttccatcttaatggattggagagctgctctatcccccagagtatgtcat 6741879  T
Q  222 attggaccgaactgggtta 240  Q
    |||| ||||||||| ||||    
T  6741878 attgaaccgaactgtgtta 6741860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 2 - 238
Target Start/End: Complemental strand, 10281999 - 10281761
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcat--tgagagtgtgggtgact 99  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||||||||  ||||| |||||||||||||||||||  || |||||||||||||     
T  10281999 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagctttcttttgtgttttctcttaggattcatattgtgagtgtgggtgaca 10281900  T
Q  100 tgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctg 198  Q
      |||| || ||||||||| || |||||||| ||| |||||| |||||||||||||||||| | |||||| |||||| ||| || |||||||||||||||    
T  10281899 c-aaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctg 10281801  T
Q  199 ctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    || ||||||||| |  ||||||||||||||||||||||||    
T  10281800 ctctctcccccagatcaggtcatattggaccgaactgggt 10281761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 33030854 - 33031024
Alignment:
Q  66 tttctcttaggattcattgagagtgtgggtgacttgaaaaa-ggatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctt 164  Q
    ||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||  ||||||||||||||||||||| |    
T  33030854 tttctcttaggattcattgagagtgtgagtgacttgaaaaatgggtagaaattatgttttgttctttgtgagcttttaagctaatttcttgtaaccccat 33030953  T
Q  165 tgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattggaccgaactg 235  Q
    || |||||||| ||| || || |||||||||||||| ||||||||| |||| |||||||| ||||||||||    
T  33030954 tgcatcactttcatcttagtgaattggagagctgctctctcccccagagtatgtcatatttgaccgaactg 33031024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 2 - 348
Target Start/End: Complemental strand, 19588992 - 19588642
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    ||||||||||| | |||  ||||||||||||||||||||||||| ||||| |||| ||||| |||||||||||||||||||||||| ||||||||||       
T  19588992 cattgtaaacatcttgggcagtgagatttcaccattggaaggatcaaaaatcttccttttgtgttttctcttaggattcattgagattgtgggtgac-ac 19588894  T
Q  102 aaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgct 200  Q
    ||||||| ||||||||| || |||||||| ||| |||||  ||| |||||||||||||| | |||||| |||||| ||| || |||||||||| ||||||    
T  19588893 aaaaagggtagaaattaggtcttgttcttgtgtaagcttataaggtaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 19588794  T
Q  201 atctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgattatgt 297  Q
     ||||||  | | ||| |||||||||||||||||||||  || || || | ||||||| || ||||||| | || |||||| || ||| ||||||||||     
T  19588793 ctctccctaagattagttcatattggaccgaactgggtcaacaatctttgagtgtttg-ttcctttctttcattgcttatctttattgctttgattatgc 19588695  T
Q  298 ttgtggtgatgctttacacttagatttaagtc--agtttgttgttgttgcttg 348  Q
    |||||||| |||| |||||||||||||| |||    |||||||||||||||||    
T  19588694 ttgtggtgttgctctacacttagatttaggtctttttttgttgttgttgcttg 19588642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 2 - 348
Target Start/End: Original strand, 17003809 - 17004160
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcat--tgagagtgtgggtgact 99  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||  || ||| ||| ||||      
T  17003809 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcatattgtgagagtgagtgaaa 17003908  T
Q  100 tgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctg 198  Q
    | |||  || ||||||||| || |||||||| ||| |||||| ||| |||||| ||||||| | |||| |  ||||| ||| || ||||||| |||||||    
T  17003909 ttaaatggg-tagaaattaggtcttgttcttgtgtaagcttgtaagttaattttttgtaactcttttgaaatactttcatcatagtggattgaagagctg 17004007  T
Q  199 ctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgattat 295  Q
    || ||||||||| | |||||||||||||||||||||||||  || || |||||||||||| || ||||||| | || |||||| || ||| |||||||||    
T  17004008 ctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttg-ttcctttctttcattgcttatcttttttgctttgattat 17004106  T
Q  296 gtttgtggtgatgctttacacttagatttaagtcag--tttgttgttgttgcttg 348  Q
    | |||||||| ||| ||||||||||||||| ||| |  |||||||||||||||||    
T  17004107 gcttgtggtgttgc-ttacacttagatttaggtctgtttttgttgttgttgcttg 17004160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 2 - 350
Target Start/End: Original strand, 31300445 - 31300798
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||| ||||| ||||| ||||||||||||||||||||||||||||||||||  ||    
T  31300445 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaggcttccttttgtgttttctcttaggattcattgagagtgtgggtgatatg 31300544  T
Q  102 a-aaaaggatagaaattatgttttgttctt-tgtgagcttgcaagcta-atttcttgtaacccctttgtatcactttgatcctaatggattggagagctg 198  Q
    | ||| || ||||||||| |  |||||||| ||| ||||||||| |||  ||||||| || | | || || |||||| ||| || |||||||||||| |     
T  31300545 agaaatgggtagaaattaggacttgttcttgtgtaagcttgcaaactatttttcttgcaa-ctcattataacactttcatcttagtggattggagagttt 31300643  T
Q  199 ctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgattat 295  Q
    || |||||| || | |||||||||||||||||||||||||  || || |||||||||||| || || |||| | || |||||| || ||||||||||||     
T  31300644 ctctctccctcagactaggtcatattggaccgaactgggtcaacaatcttggtgtgtttg-ttcctctctttcattgcttatctttattgttttgattac 31300742  T
Q  296 gtttgtggtgatgctttacacttagatttaagtcag-tttgttgttgttgcttgaa 350  Q
      |||||||| |||| |||||||||||||| ||| | ||||||||| |||||||||    
T  31300743 acttgtggtgttgctctacacttagatttaggtctgttttgttgtttttgcttgaa 31300798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 2 - 238
Target Start/End: Original strand, 11916822 - 11917059
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattga--gagtgtgggtgact 99  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| ||||| |||| ||||| ||||||||||||| ||||| |   ||| |||||||||     
T  11916822 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaa-cttccttttgtgttttctcttagggttcatcgtttgagagtgggtgaca 11916920  T
Q  100 tgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctg 198  Q
      |||| || ||||||||| || |||||||| ||| ||||||||| ||| ||||||||||| | |||||| |||||| ||  || |||||||||||||||    
T  11916921 c-aaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaaactattttcttgtaactcttttgtaacactttcattatagtggattggagagctg 11917019  T
Q  199 ctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    || ||||||||||| |||||||||||||||||||||||||    
T  11917020 ctctctcccccatattaggtcatattggaccgaactgggt 11917059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 2 - 350
Target Start/End: Complemental strand, 3880547 - 3880197
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcat--tgagagtgtgggtgact 99  Q
    ||||||||||||  ||| | |||||||||||||||||||||||| |||||||||| |||||  ||||||| ||||||||||  || ||| |||||||||     
T  3880547 cattgtaaacacattgggttgtgagatttcaccattggaaggatcaaaaagcttccttttgttttttctcctaggattcatattgtgagagtgggtgaca 3880448  T
Q  100 tgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctg 198  Q
      |||| || ||||||||| || |||||||| ||| |||||| || ||||||||||||||| | |||||| |||||| ||| || |||||||||||||||    
T  3880447 c-aaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaaactaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctg 3880349  T
Q  199 ctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgattat 295  Q
    || ||| || || | ||||||||||||||| ||||||  |  || || ||||||||||   || ||||||| | || |||||| || ||| |||||||||    
T  3880348 ctctctgcctcagattaggtcatattggacagaactgaatcaacaatcttggtgtgtt--gttcctttctttcattgcttatctttattgctttgattat 3880251  T
Q  296 gtttgtggtgatgctttacacttagatttaagtcagtttgttgttgttgcttgaa 350  Q
    | |||||||| ||||||||||||||||||| ||| |||| ||||||||| |||||    
T  3880250 gcttgtggtgttgctttacacttagatttaggtctgttt-ttgttgttgattgaa 3880197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 2 - 322
Target Start/End: Original strand, 12084027 - 12084349
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccatt-ggaaggataaaaaagcttctttttgggttttctcttaggattcat--tgagagtgtgggtgac 98  Q
    |||| |||||||| ||| |||||||| ||||||||| ||||||||||||  ||||| ||||| ||||| |||||||||||||  || ||| |||||||||    
T  12084027 cattttaaacaccttgggtagtgagaattcaccatttggaaggataaaa--gcttccttttgtgttttttcttaggattcatattgtgagagtgggtgac 12084124  T
Q  99 ttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagct 197  Q
        ||| || ||||||||| || |||||||| ||| |||||  ||| |||||||||||||| | |||||| |||||| ||| || ||||||||||||||    
T  12084125 ac--aaatgggtagaaattaggtcttgttcttgtgtaagcttttaagttaatttcttgtaactc-tttgtaacactttcatcatagtggattggagagct 12084221  T
Q  198 gctatctcccccatagtaggtcatattggaccgaactgggttacc---atattggtgtgtttgttttctttcttgc-tttcttatcttgttgttttgatt 293  Q
    ||| ||| ||||||| ||||||||| ||||||||||||||| | |   || |||||||||||| || ||||||| | || ||||||||  || |||||||    
T  12084222 gctctctgccccatattaggtcatagtggaccgaactgggtcaacaatattttggtgtgtttg-ttcctttctttcattgcttatctttgtgctttgatt 12084320  T
Q  294 atgtttgtggtgatgctttacacttagat 322  Q
    ||| |||||||| |||| |||||||||||    
T  12084321 atgcttgtggtgttgctctacacttagat 12084349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 2 - 348
Target Start/End: Complemental strand, 14520477 - 14520125
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctctt-aggattcat---tgagagtgtgggtga 97  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||| ||||| ||||| || ||||||| ||| |||||   |||||| |||||| |    
T  14520477 cattgtaaacaccttggatagtgagatttcaccattggaaggatcaaaa-gcttccttttgtgtcttctctttagggttcataattgagagagtgggtaa 14520379  T
Q  98 cttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagc 196  Q
    |    ||| || ||||||||| || |||||||| ||| ||||||||||||| ||||||||||| | |||||| |||||| ||| || ||||||| |||||    
T  14520378 cac--aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcatcatagtggattgaagagc 14520282  T
Q  197 tgctatctcccccatagtaggtcatattggaccgaactgggttacca---tattggtgtgtttgttttctttcttgc-tttcttatcttgttgttttgat 292  Q
    |||| || |||| | | ||||||||||||||||||||||||| | ||   | |||||||||||| || ||||||| |  | ||||||||  || |||| |    
T  14520281 tgctctcccccctagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttg-ttcctttctttcagtgcttatctttgtgctttgtt 14520183  T
Q  293 tatgtttgtggtgatgctttacacttagatttaagtcag--tttgttgttgttgcttg 348  Q
    |||| |||||||| |||| ||||||||||| || ||| |  |||||||||||||||||    
T  14520182 tatgcttgtggtgttgctctacacttagatctaggtctgtttttgttgttgttgcttg 14520125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 2 - 238
Target Start/End: Original strand, 9353182 - 9353419
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctctt--aggat--tcattgagagtgtgggtga 97  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||| ||||| ||||| || |||||||  ||| |  | |||||||| |||||  |    
T  9353182 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaa-gcttccttttgtgtcttctctttaaggttcattattgagagagtgggaaa 9353280  T
Q  98 cttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagc 196  Q
    |    ||| || |||||||||  | |||||||| ||| ||||||||||||  ||||||||||| | |||||| |||||| ||| || |||||||||||||    
T  9353281 cac--aaatgggtagaaattagatcttgttcttgtgtaagcttgcaagcttttttcttgtaactc-tttgtaacactttcatcatagtggattggagagc 9353377  T
Q  197 tgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||| ||||||||| | |||||||||||||||||||||||||    
T  9353378 tgctctctcccccagattaggtcatattggaccgaactgggt 9353419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 24553377 - 24553470
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggt 95  Q
    ||||||||||||| ||| |||||||||||||||||| ||||||| |||||||||| ||||| |||||||||||| ||||||| |||||||||||    
T  24553377 cattgtaaacaccttgggtagtgagatttcaccattagaaggatcaaaaagcttccttttgtgttttctcttagaattcattaagagtgtgggt 24553470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 6 - 238
Target Start/End: Complemental strand, 15464777 - 15464542
Alignment:
Q  6 gtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctctt--aggattcatt---gagagtgtgggtgactt 100  Q
    ||||||||| ||| |||||||||||||||||||||||||| |||| ||||| ||||| || |||||||  ||| ||||||   | ||| |||||  ||      
T  15464777 gtaaacaccttgggtagtgagatttcaccattggaaggatcaaaa-gcttccttttgtgtcttctcttttagggttcattattgtgagagtgggaaacac 15464679  T
Q  101 gaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaattt-cttgtaacccctttgtatcactttgatcctaatggattggagagctg 198  Q
      ||| || ||||||||| || |||||||| ||| ||||||||||||| ||| |||||||| | |||||| |||||| ||| || |||||||||||||||    
T  15464678 --aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaactc-tttgtaacactttcatcatagtggattggagagctg 15464582  T
Q  199 ctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    || ||||||||| | ||| |||||||||||||||||||||    
T  15464581 ctctctcccccagattagatcatattggaccgaactgggt 15464542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 238
Target Start/End: Original strand, 36932198 - 36932437
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctctt--aggattcatt---gagagtgtgggtg 96  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||| ||||| | ||| || |||| ||  ||| ||||||   ||||| |||||      
T  36932198 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaa-gcttcctcttgtgtcttctgttttagggttcattattgagagagtgggaa 36932296  T
Q  97 acttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaattt-cttgtaacccctttgtatcactttgatcctaatggattggaga 194  Q
    ||    ||| || ||||||||| || |||||||| ||| | ||||||||||| ||| |||||||| | |||||| |||||| ||| || |||||||||||    
T  36932297 acac--aaatgggtagaaattaagtcttgttcttatgtaaacttgcaagctatttttcttgtaactc-tttgtaacactttcatcatagtggattggaga 36932393  T
Q  195 gctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||| ||||||||| | |||||||||||||||||||||||||    
T  36932394 gctgctctctcccccagattaggtcatattggaccgaactgggt 36932437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 7 - 173
Target Start/End: Complemental strand, 30900108 - 30899942
Alignment:
Q  7 taaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttgaaaaa 106  Q
    |||||||| ||| |||||||||||||  |  ||||||||||||||||||  ||| | ||||||||| ||||||| ||| | || || ||| |||||||||    
T  30900108 taaacaccttgggtagtgagatttcattagaggaaggataaaaaagctttctttagtgttttctct-aggattctttgtgggtttgagtggcttgaaaaa 30900010  T
Q  107 gga-tagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcact 173  Q
      | |||||| ||   ||||||||||||||||||| | ||||||||||||||||| ||||||||||||    
T  30900009 tcagtagaaaatagagtttgttctttgtgagcttgtaggctaatttcttgtaacctctttgtatcact 30899942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 323
Target Start/End: Complemental strand, 28537707 - 28537549
Alignment:
Q  167 tatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggttacca-tattggtgtgtttgttttcttt 265  Q
    ||||||||| ||| || ||||||||||||||||| |||| |  |||| ||||  ||||||| |||  || |||| || | ||||| ||||||||| | ||    
T  28537707 tatcacttttatcttagtggattggagagctgctctctctcttataggaggttctattggatcgagttgagttatcaatcttggtctgtttgttt-catt 28537609  T
Q  266 cttgctttcttatctt-gttg-ttttgattatgtttgtggtgatgctttacacttagatt 323  Q
    |||||||||||||||| |||| |||||||||||||||||||| || ||||||||||||||    
T  28537608 cttgctttcttatctttgttgattttgattatgtttgtggtgctgttttacacttagatt 28537549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 6 - 188
Target Start/End: Complemental strand, 5611385 - 5611202
Alignment:
Q  6 gtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattga-gagtgtgggtgacttgaaa 104  Q
    ||||||||| | |||| ||||||||||  |||| || ||| |||||||||  ||| | |||||||||||||| ||||| | ||||||   |||||| |||    
T  5611385 gtaaacaccttagttaatgagatttcattattgaaaagatcaaaaagcttgctttagtgttttctcttaggaatcatttatgagtgtttatgacttaaaa 5611286  T
Q  105 aaggatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggat 188  Q
    | |||||||||| |  ||||||||||||||| |||  |||||||||| || ||| | |||||||||| ||| ||| || |||||    
T  5611285 atggatagaaataagattttgttctttgtgaacttttaagctaattttttttaatctctttgtatcagttttatcatagtggat 5611202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 38192299 - 38192195
Alignment:
Q  123 ttgttctt-tgtgagcttgcaagctaattt-cttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtca 220  Q
    |||||||| ||| ||||||||||||| ||| |||||||||| |||||| |||||| ||| || ||||||||||||||||| ||||||||| | |||| ||    
T  38192299 ttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggcca 38192201  T
Q  221 tattgg 226  Q
    ||||||    
T  38192200 tattgg 38192195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 38219524 - 38219420
Alignment:
Q  123 ttgttctt-tgtgagcttgcaagctaattt-cttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtca 220  Q
    |||||||| ||| ||||||||||||| ||| |||||||||| |||||| |||||| ||| || ||||||||||||||||| ||||||||| | |||| ||    
T  38219524 ttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggcca 38219426  T
Q  221 tattgg 226  Q
    ||||||    
T  38219425 tattgg 38219420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 142 - 348
Target Start/End: Original strand, 24553499 - 24553707
Alignment:
Q  142 aagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggttac 241  Q
    |||||||||||||||||| | || ||| |||||| ||| || |||| ||||| |||||| ||||||  | | ||||||||||||||||||||||| | |     
T  24553499 aagctaatttcttgtaactcatt-gtaacactttcatcttagtggagtggag-gctgctctctcccatagattaggtcatattggaccgaactggatcaa 24553596  T
Q  242 ca-tattggtgtgtttgttttctttcttgcttt-cttatcttg-ttgttttgattatgtttgtggtgatgctttacacttagatttaagtcag--tttgt 336  Q
    || | ||||||||||||||  ||||||| | || ||||||||  ||| |||||||||| |||||||| | || |||||||||||||| ||| |  |||||    
T  24553597 caatcttggtgtgtttgttc-ctttctttcattgcttatctttattgctttgattatgcttgtggtgtttctctacacttagatttaggtctgtttttgt 24553695  T
Q  337 tgttgttgcttg 348  Q
    || |||||||||    
T  24553696 tgatgttgcttg 24553707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 4410241 - 4410295
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||||||||||||||||| ||||||||| | ||||||| |||||||||||||||||    
T  4410241 tggattggagagctgctctctcccccagactaggtcagattggaccgaactgggt 4410295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 5887571 - 5887495
Alignment:
Q  101 gaaaaaggatagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||| |||||||||||| | |||||||||||||||||||   |||||||||||||| ||||| ||||||||||||||    
T  5887571 gaaaatggatagaaatta-gatttgttctttgtgagcttgtttaagctaatttcttgcaacccatttgtatcactttg 5887495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 103 - 176
Target Start/End: Complemental strand, 13695845 - 13695770
Alignment:
Q  103 aaaaggatagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    |||||| || |||||| | |||||||||||||||||||   |||||||||||||||||||| |||||||| |||||    
T  13695845 aaaagggtacaaattagggtttgttctttgtgagcttgttaaagctaatttcttgtaacccttttgtatctctttg 13695770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 35387775 - 35387684
Alignment:
Q  135 agcttgcaagctaattt-cttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattgg 226  Q
    ||||||||||||| ||| |||||||||| |||||| |||||| ||| || | ||||||||||||||| ||||||||| | |||| ||||||||    
T  35387775 agcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtagattggagagctgctctctcccccagattaggccatattgg 35387684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 173
Target Start/End: Complemental strand, 34842785 - 34842678
Alignment:
Q  67 ttctcttaggattcattgagagtgtgggtgacttgaaaaagga-tagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaaccccttt 165  Q
    ||||||||| |||||||| | || |  ||||||||||||| || ||||||||| | | ||||||| ||||||||| ||| |||  |||||||||| ||||    
T  34842785 ttctcttagaattcattgtgggttttagtgacttgaaaaatgagtagaaattaggatatgttcttggtgagcttgtaagataacatcttgtaacctcttt 34842686  T
Q  166 gtatcact 173  Q
    ||||||||    
T  34842685 gtatcact 34842678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 38219647 - 38219604
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggat 45  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||    
T  38219647 cattgtaaacaccttgggtagtgagatttcaccattggaaggat 38219604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 15552464 - 15552518
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||||||| |||||| ||||||||| | ||||||| |||||||||||||||||    
T  15552464 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggt 15552518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 28278329 - 28278405
Alignment:
Q  101 gaaaaaggatagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||| || ||||||||||| || ||||||||||||||||   |||||||||||||||||||| |||||||| |||||    
T  28278329 gaaaatgggtagaaattatggtt-gttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttg 28278405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 31179431 - 31179377
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||||||| |||||| ||||||||| | ||||||| |||||||||||||||||    
T  31179431 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggt 31179377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 31542953 - 31543007
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||||||| |||||| ||||||||| | ||||||| |||||||||||||||||    
T  31542953 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggt 31543007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 31545299 - 31545353
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||||||| |||||| ||||||||| | ||||||| |||||||||||||||||    
T  31545299 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggt 31545353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 122 - 176
Target Start/End: Original strand, 33831713 - 33831769
Alignment:
Q  122 tttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    |||||||||||||||||||   |||||||||||||||||||| |||||||| |||||    
T  33831713 tttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatctctttg 33831769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 213499 - 213554
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||||||||   |||||||||||||||||||| |||||||| |||||    
T  213499 ttgttctttgtgagcttgttaaagctaatttcttgtaacccatttgtatctctttg 213554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 173
Target Start/End: Complemental strand, 31336261 - 31336153
Alignment:
Q  65 ttttctcttaggattcattgagagtgtgggtgacttgaaaaaggatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctt 164  Q
    ||||||||||||||| |||| | || || |||||||||||| ||||| |||| | | ||| ||||| ||||| | |  | |||||||||||||| | |||    
T  31336261 ttttctcttaggatttattgtgggtttgagtgacttgaaaatggatataaataaggattttttcttagtgagatcgggatctaatttcttgtaagctctt 31336162  T
Q  165 tgtatcact 173  Q
    |||||||||    
T  31336161 tgtatcact 31336153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 38747039 - 38747094
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||||||||   |||||||||||||||||||| |||||||| |||||    
T  38747039 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttg 38747094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 42127220 - 42127268
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaa 50  Q
    ||||||| ||||| ||| |||||||||||||||||||||||||| ||||    
T  42127220 cattgtatacaccttgggtagtgagatttcaccattggaaggatcaaaa 42127268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 3075793 - 3075743
Alignment:
Q  122 tttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatc 170  Q
    ||||||||||||||||||||  || ||||||||||||||||| ||||||||    
T  3075793 tttgttctttgtgagcttgctgaatctaatttcttgtaacccatttgtatc 3075743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 8566081 - 8566031
Alignment:
Q  122 tttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatc 170  Q
    |||||||||||||||||||   |||||||||||||||||||| ||||||||    
T  8566081 tttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatc 8566031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 35387911 - 35387868
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggat 45  Q
    |||||||| |||| ||| ||||||||||||||||||||||||||    
T  35387911 cattgtaatcaccttgggtagtgagatttcaccattggaaggat 35387868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 3373197 - 3373143
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||||||| | |||| ||||||||| | ||||||| |||||||||||||||||    
T  3373197 tggattggagggttgctctctcccccagactaggtcagattggaccgaactgggt 3373143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 10749919 - 10749973
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||||| |||| |||||| ||||||||| | ||||||| |||||||||||||||||    
T  10749919 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggt 10749973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 226
Target Start/End: Complemental strand, 15044750 - 15044708
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattgg 226  Q
    ||||||||||||||||| ||||||||||| |||| ||||||||    
T  15044750 tggattggagagctgctctctcccccatattaggccatattgg 15044708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 15354635 - 15354581
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||||| |||| |||||| ||||||||| | ||||||| |||||||||||||||||    
T  15354635 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggt 15354581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 160
Target Start/End: Complemental strand, 22536443 - 22536385
Alignment:
Q  103 aaaaggatagaaattatgttttgttctttgtgagcttg-caagctaatttcttgtaacc 160  Q
    |||||| ||||||||| | ||||||| |||||| |||| ||||||||||||||||||||    
T  22536443 aaaagggtagaaattagggtttgttcattgtgaacttgtcaagctaatttcttgtaacc 22536385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 32636837 - 32636913
Alignment:
Q  101 gaaaaaggatagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||| || ||||||||||| || ||||||||||| ||||   |||||||||||||||||||| |||||||| |||||    
T  32636837 gaaaatgggtagaaattatggtt-gttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctctttg 32636913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 38960192 - 38960138
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||||| |||| |||||| ||||||||| | ||||||| |||||||||||||||||    
T  38960192 tggatcggagggctgctctctcccccaaactaggtcagattggaccgaactgggt 38960138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 42428585 - 42428509
Alignment:
Q  101 gaaaaaggatagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||| || ||||||||||| ||| |||||||||| ||||   |||||||||||||||||||| |||||||| |||||    
T  42428585 gaaaatgggtagaaattatggttt-ttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttg 42428509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 176
Target Start/End: Original strand, 16452113 - 16452169
Alignment:
Q  122 tttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    |||||||||| ||||||||   |||||||||||||||||||| |||||||| |||||    
T  16452113 tttgttctttctgagcttgttgaagctaatttcttgtaacccatttgtatctctttg 16452169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 238
Target Start/End: Original strand, 18466900 - 18466957
Alignment:
Q  181 taatggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||||  ||||||||||| ||||||||| | |||||||  ||||||||||||||||    
T  18466900 taatggaacggagagctgctctctcccccagactaggtcaatttggaccgaactgggt 18466957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 238
Target Start/End: Original strand, 27910666 - 27910723
Alignment:
Q  181 taatggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||||  ||||||||||| ||||||||| | |||||||  ||||||||||||||||    
T  27910666 taatggaacggagagctgctctctcccccagattaggtcaatttggaccgaactgggt 27910723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 226
Target Start/End: Complemental strand, 31180311 - 31180236
Alignment:
Q  149 tttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattgg 226  Q
    ||||||||||||| |||||| ||||||  || || ||||||||||||||||| ||||||||| | |||| ||||||||    
T  31180311 tttcttgtaaccc-tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 31180236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 538063 - 538114
Alignment:
Q  127 tctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||||   |||||||||||||||||||| |||||||| |||||    
T  538063 tctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttg 538114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 13488237 - 13488292
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||| ||||   |||||||||||||||||||| |||||||| |||||    
T  13488237 ttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttg 13488292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 25412794 - 25412849
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||| ||||   |||||||||||||||||||| |||||||| |||||    
T  25412794 ttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttg 25412849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 25921527 - 25921479
Alignment:
Q  190 ggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||||||||||| ||||||||| | |||||||  ||||||||||||||||    
T  25921527 ggagagctgctctctcccccagactaggtcaatttggaccgaactgggt 25921479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 39468683 - 39468628
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||| ||||   |||||||||||||||||||| |||||||| |||||    
T  39468683 ttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttg 39468628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 143; Significance: 5e-75; HSPs: 58)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 2 - 325
Target Start/End: Original strand, 24435821 - 24436144
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||  || |||||||||  |     
T  24435821 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcattatgaatgtgggtgatata 24435920  T
Q  102 aaaaaggatagaaattatgttttgttcttt-gtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgct 200  Q
    |||| || ||||||||| || ||||| ||| || |||||  |||||||||||||||||  | |||||| || ||| |||||| ||||| |||| ||||||    
T  24435921 aaaatgggtagaaattaggtcttgtttttttgtaagcttataagctaatttcttgtaattcatttgtaacattttcatcctagtggatcggagggctgct 24436020  T
Q  201 atctcccccatagtaggtcatattggaccgaactgggttaccatattggtgtgtttgttttctttcttgctttcttatc-ttgttgttttgattatgttt 299  Q
     ||||||| | |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||| ||||| ||    
T  24436021 ctctcccctagagtaggtcatattggatcgaactgggttaccatcttggtgtgtttgttttctttcttgctttcttatctttgttgctttgtttatgctt 24436120  T
Q  300 gtggtgatgctttacacttagattta 325  Q
    || |||   || ||||||||||||||    
T  24436121 gttgtg--tctctacacttagattta 24436144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 2 - 350
Target Start/End: Complemental strand, 31979759 - 31979407
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||| ||||| ||||| |||||||||||||||||||||||||||||||||||       
T  31979759 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaa-gcttccttttgtgttttctcttaggattcattgagagtgtgggtgacaca 31979661  T
Q  102 aaaaaggatagaaattatgttttgttc-tttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgct 200  Q
    |||| || ||||||||| || |||||| ||||| |||||  ||| |||||||||||||| | |||| | |||||| ||| || |||||||||| ||||||    
T  31979660 aaaatgggtagaaattaggtcttgttcttttgtaagcttataagttaatttcttgtaactcttttgcaacactttcatcttagtggattggagggctgct 31979561  T
Q  201 atctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgtt-ttctttcttgctttcttatc-ttgttgttttgattatgt 297  Q
     ||||||||| | || ||||||||||||||||||||||  || || ||||||||||||||  ||| | ||  || |||||| || ||| ||||||||||     
T  31979560 ctctcccccagattatgtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctctat-ttcattgcttatctttattgctttgattatgc 31979462  T
Q  298 ttgtggtgatgctttacacttagatttaagtcag--tttgttgttgttgcttgaa 350  Q
    ||||| || |||| |||||||||||||| ||| |  |||||||||||||||||||    
T  31979461 ttgtgatgttgctctacacttagatttaggtctgtttttgttgttgttgcttgaa 31979407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 11 - 348
Target Start/End: Original strand, 10077027 - 10077366
Alignment:
Q  11 caccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttgaaaaaggat 110  Q
    |||| ||| ||||||||||| |||||||||||||| |||||||||| ||||| ||||| |||||||||||||||||  ||||||||||   |||| || |    
T  10077027 caccttgggtagtgagatttgaccattggaaggatcaaaaagcttccttttgtgttttatcttaggattcattgag--tgtgggtgacac-aaaatgggt 10077123  T
Q  111 agaaattatgttttgttcttt-gtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctccccc 209  Q
    |||||||| || ||||||||| || |||||  ||||||||||||||||||   |||||| |||||| ||| || |||||||||| |||||| ||||||||    
T  10077124 agaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaacttttttgtaacactttcatcatagtggattggagggctgctctctccccc 10077223  T
Q  210 atagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgattatgtttgtggtga 306  Q
    | | ||||||||||||||||||| |||||  || || |||||||||||| || ||||||| | || |||||| || ||| |||||||||| ||||||||     
T  10077224 agattaggtcatattggaccgaattgggtcaacaatcttggtgtgtttg-ttcctttctttcattgcttatctttattgctttgattatgcttgtggtgt 10077322  T
Q  307 tgctttacacttagatttaagtcag--tttgttgttgttgcttg 348  Q
    |||| |||||||||||||| ||| |  |||||||||||||||||    
T  10077323 tgctctacacttagatttaggtctgtttttgttgttgttgcttg 10077366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 2 - 236
Target Start/End: Original strand, 21801194 - 21801429
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattca-ttgagagtgtgggtgactt 100  Q
    ||||||||||||| ||| ||||||||||||| |||||||||||| |||||||||| ||||| ||||||||||||| |||| |||||||||||||||||      
T  21801194 cattgtaaacaccttgggtagtgagatttcaacattggaaggatcaaaaagcttccttttgtgttttctcttagggttcatttgagagtgtgggtgac-a 21801292  T
Q  101 gaaaaaggatagaaattatgttttgttc-tttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgc 199  Q
     |||| || ||||||||| || |||||| ||||| |||||  ||| |||||||||||||| | |||||| |||||| ||| || ||||||||||||||||    
T  21801293 caaaatgggtagaaattaagtcttgttcttttgtaagcttataagataatttcttgtaactcttttgtaacacttttatcttagtggattggagagctgc 21801392  T
Q  200 tatctcccccatagtaggtcatattggaccgaactgg 236  Q
    |  |||||||| | ||||||||||||||| |||||||    
T  21801393 tcgctcccccagattaggtcatattggactgaactgg 21801429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 2 - 259
Target Start/End: Original strand, 5572093 - 5572350
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    ||||||||||||| ||| |||||||||||||| ||||||| ||| |||| ||||| ||||| |||||||||||||||||||||||||||||||||||       
T  5572093 cattgtaaacaccttgggtagtgagatttcactattggaatgatcaaaa-gcttccttttgtgttttctcttaggattcattgagagtgtgggtgac-ac 5572190  T
Q  102 aaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgct 200  Q
    |||| |  ||||||||| || |||||||| ||| |||||  |||||||||||||||||| | |||||| |||||| ||| || |||||||||| ||||||    
T  5572191 aaaatgcgtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 5572290  T
Q  201 atctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgtt 259  Q
     ||||||| | | ||||||||||||||||||| |||||  || || ||||||||||||||    
T  5572291 ctctcccctagattaggtcatattggaccgaattgggtcaacaatcttggtgtgtttgtt 5572350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 2 - 348
Target Start/End: Complemental strand, 31936822 - 31936484
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||  |||| ||||||||||||||||||||||||||||||||||  ||    
T  31936822 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttc--tttgtgttttctcttaggattcattgagagtgtgggtgatatg 31936725  T
Q  102 aaaaa-ggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgc 199  Q
    ||||| || ||||||||| | ||||||||| ||| ||||||||||||| ||||||||||           |||||| ||  || ||||||||||||||||    
T  31936724 aaaaatgggtagaaattaggatttgttcttgtgtaagcttgcaagctattttcttgtaa-----------cactttcatattagtggattggagagctgc 31936636  T
Q  200 tatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgattatg 296  Q
    | |||| |||| | ||||||||||||||||||||| |||  || || |||||||||||| || || |||| | || |||||| || ||| |||| |||||    
T  31936635 tctctctcccagactaggtcatattggaccgaactaggtcaacaatcttggtgtgtttg-ttcctatctttcattgcttatctttattgctttgtttatg 31936537  T
Q  297 tttgtggtgatgctttacacttagatttaagtcag-tttgttgttgttgcttg 348  Q
     |||||||| |||| ||||||| |||| | ||| | |||||||||||||||||    
T  31936536 cttgtggtgttgctctacactttgattaaggtctgttttgttgttgttgcttg 31936484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 2 - 234
Target Start/End: Complemental strand, 14521921 - 14521688
Alignment:
Q  2 cattgtaaacaccctggttagtgaga-tttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgactt 100  Q
    ||||||||||||| ||| |||||||| |||||||||||||||||||||||| |||| |||   |||||||||||||||| |||||||||||||||||| |    
T  14521921 cattgtaaacaccttgggtagtgagaatttcaccattggaaggataaaaaatcttcctttaatgttttctcttaggatttattgagagtgtgggtgacat 14521822  T
Q  101 gaaaaa-ggatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgc 199  Q
    |||||| |  ||||||||| ||| |||||||||||||||     |||||||| ||||||| | ||||||||||||| ||| || || ||||||||| |||    
T  14521821 gaaaaatgtgtagaaattaggttgtgttctttgtgagctcttgtgctaattt-ttgtaactcatttgtatcactttcatcttattgaattggagaggtgc 14521723  T
Q  200 tatctcccccatagtaggtcatattggaccgaact 234  Q
    | ||||| | | |||||||||||||||||||||||    
T  14521722 tctctcctcgagagtaggtcatattggaccgaact 14521688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 2 - 259
Target Start/End: Original strand, 31086324 - 31086582
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattga-gagtgtgggtgactt 100  Q
    ||||||||||||| ||| | |||||||||||||||||||||||| |||| ||||||||||  ||||||||||||||||||||   |||||||||||||      
T  31086324 cattgtaaacaccttgggttgtgagatttcaccattggaaggatcaaaa-gcttctttttatgttttctcttaggattcattattgagtgtgggtgacac 31086422  T
Q  101 gaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgc 199  Q
     |||| || ||||||||| || ||| |||| ||| |||||  |||||||||||||||||| |||||||| |||||| ||| || |||||||||||| |||    
T  31086423 -aaaatgggtagaaattaggtcttgctcttgtgtaagcttataagctaatttcttgtaactcctttgtaacactttcatcatagtggattggagagttgc 31086521  T
Q  200 tatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgtt 259  Q
    | ||||||| | | ||| ||||||||||| |||||||||  || || ||||||||||||||    
T  31086522 tctctcccctagattagatcatattggactgaactgggtcaacaatcttggtgtgtttgtt 31086582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 2 - 231
Target Start/End: Complemental strand, 18233093 - 18232862
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcatt---gagagtgtgggtgac 98  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||| ||||| ||||| ||||||||||||||||||||   |||||||||||||||    
T  18233093 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaa-gcttccttttgtgttttctcttaggattcattattgagagtgtgggtgac 18232995  T
Q  99 ttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagct 197  Q
       |||| || ||||||||| || |||||||| ||| |||||  ||||| |||||||||||| | |||||| |||||| ||| || || ||||||| | |    
T  18232994 ac-aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctgatttcttgtaactcttttgtaacactttcatcatagtgaattggagggtt 18232896  T
Q  198 gctatctcccccatagtaggtcatattggaccga 231  Q
    ||| ||||||||| | ||||||||||||||||||    
T  18232895 gctctctcccccagattaggtcatattggaccga 18232862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 4 - 329
Target Start/End: Original strand, 31076788 - 31077121
Alignment:
Q  4 ttgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttgaa 103  Q
    ||||||||||| | | || ||||||||||||||||||| ||| |||||  ||  ||| | ||||||||||||||||||| | || |||||||||||||||    
T  31076788 ttgtaaacaccttaggtattgagatttcaccattggaatgatcaaaaaaatttctttagtgttttctcttaggattcatagtgattgtgggtgacttgaa 31076887  T
Q  104 a------aaggatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagct 197  Q
    |      | ||||| |||||| || ||||||||||||| ||   |||||||||| ||||||||| ||||||||||||| ||| || ||||||||||||||    
T  31076888 attaaaaatggataaaaattaggtcttgttctttgtgaactcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagct 31076987  T
Q  198 gctatctcccccatagtaggtcatattggaccgaactgggttacca-tattggtgtgtttgttttctttcttgctttcttatctt-gttg-ttttgatta 294  Q
    |||||||||   | |||||||||||||||||  |||| |||||||| | ||||| ||||||||| | ||||| ||  ||||| || |||| |||||||||    
T  31076988 gctatctcctagagagtaggtcatattggactaaactaggttaccaatcttggtatgtttgttt-cattctttctggcttatatttgttgcttttgatta 31077086  T
Q  295 tgtttgtggtgatgctttacacttagatttaagtc 329  Q
    || || || || || | ||||||||||||||||||    
T  31077087 tgcttatgatgttgttctacacttagatttaagtc 31077121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 2 - 334
Target Start/End: Complemental strand, 4630200 - 4629865
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcatt-gagagtgtgggtgactt 100  Q
    |||| |||||||  ||| |||||||||||||||||||||||||| |||| ||||| ||||| |||||||||||||||||||| |||||| ||||||||      
T  4630200 cattttaaacacattgggtagtgagatttcaccattggaaggatcaaaa-gcttccttttgtgttttctcttaggattcatttgagagtttgggtgacac 4630102  T
Q  101 gaaaaaggatagaaattatgttttgttcttt-gtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgc 199  Q
     ||| ||| ||||||||| || ||||||||| || |||||  ||| ||||||||||||||   |||||| |||||| ||| || ||||||||||||||||    
T  4630101 aaaatagg-tagaaattaggtcttgttcttttgtaagcttataagttaatttcttgtaactattttgtaacactttcatcttagtggattggagagctgc 4630003  T
Q  200 tatctcccccatagtaggtcatattggaccgaactgggttacca--tattggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgattat 295  Q
    | ||| ||| | | ||||||||||||||| |||||| || | ||    ||| |||||||| || ||||||| | || |||||| || ||| |||||||||    
T  4630002 tctcttccctagattaggtcatattggactgaactgagtcaacaatctttgatgtgtttg-ttcctttctttcattgcttatctttattgctttgattat 4629904  T
Q  296 gtttgtggtgatgctttacacttagatttaagtcagttt 334  Q
    | |||||||| |||| |||||||||||||| ||| ||||    
T  4629903 gcttgtggtgttgctctacacttagatttaggtctgttt 4629865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 2 - 344
Target Start/End: Complemental strand, 22963946 - 22963602
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcatt---gagagtgtgggtgac 98  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||||  |||  |||| ||||||| ||||||||||||   ||||||||| |||||    
T  22963946 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaat-ttccctttgtgttttcttttaggattcattattgagagtgtgagtgac 22963848  T
Q  99 ttgaaaaaggatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctg 198  Q
       |||| || ||||||||| |  ||||| | ||| || ||  |||||||||||||||||| | |||||| |||||| ||| || |||||||||| ||||    
T  22963847 aa-aaaatgggtagaaattacggcttgttttgtgtaaggttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctg 22963749  T
Q  199 ctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatct-tgttgttttgattat 295  Q
    || ||| ||||| | | |||||||||| ||||||||||||  || || |||||||||||| || ||||||| | |  ||||||| | ||| |||||||||    
T  22963748 ctctct-ccccagatttggtcatattgcaccgaactgggtcaacaatcttggtgtgtttg-ttcctttctttcatagcttatctctattgctttgattat 22963651  T
Q  296 gtttgtggtgatgctttacacttagatttaagtcagtttgttgttgttg 344  Q
    | |||||||| |||| ||||||||||| || ||| |||| |||||||||    
T  22963650 gcttgtggtgttgctctacacttagatctaggtctgttttttgttgttg 22963602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 2 - 344
Target Start/End: Original strand, 23824447 - 23824791
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcatt---gagagtgtgggtgac 98  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||||  |||  |||| ||||||| ||||||||||||   ||||||||| |||||    
T  23824447 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaat-ttccctttgtgttttcttttaggattcattattgagagtgtgagtgac 23824545  T
Q  99 ttgaaaaaggatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctg 198  Q
       |||| || ||||||||| |  ||||| | ||| || ||  |||||||||||||||||| | |||||| |||||| ||| || |||||||||| ||||    
T  23824546 aa-aaaatgggtagaaattacggcttgttttgtgtaaggttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctg 23824644  T
Q  199 ctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatct-tgttgttttgattat 295  Q
    || ||| ||||| | | |||||||||| ||||||||||||  || || |||||||||||| || ||||||| | |  ||||||| | ||| |||||||||    
T  23824645 ctctct-ccccagatttggtcatattgcaccgaactgggtcaacaatcttggtgtgtttg-ttcctttctttcatagcttatctctattgctttgattat 23824742  T
Q  296 gtttgtggtgatgctttacacttagatttaagtcagtttgttgttgttg 344  Q
    | |||||||| |||| ||||||||||| || ||| |||| |||||||||    
T  23824743 gcttgtggtgttgctctacacttagatctaggtctgttttttgttgttg 23824791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 350
Target Start/End: Original strand, 33721426 - 33721760
Alignment:
Q  20 tagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattga-gagtgtgggtgacttgaaaaa-ggatagaaatt 117  Q
    |||||||||||||  ||||||| ||| |||||||| | ||| | |||||||||||||||||||| | ||||||| ||||| | ||||| ||    |||||    
T  33721426 tagtgagatttcattattggaatgatgaaaaagctccctttagtgttttctcttaggattcatttaggagtgtgtgtgacctaaaaaatgggggaaaatt 33721525  T
Q  118 atgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtagg 217  Q
    | |||||||||||| |||| ||  || |||||||||||||||| |||||||| | | | ||| || |||||  ||||| || | ||| |||||||||||     
T  33721526 aggttttgttctttatgagtttttaaactaatttcttgtaacctctttgtataattcttatcatagtggatcagagagttgttctcttccccatagtaga 33721625  T
Q  218 tcatattggaccgaactgggtta-ccatattggtgtgtttgttttctttcttgctttcttatc-ttgttgttttgattatgtttgtggtgatgctttaca 315  Q
    |||| ||||||  |||||| | |   |||||||||||||  ||||||| ||| || ||||||| |||||| ||||| |||||||||||||||| || |||    
T  33721626 tcattttggactaaactggataagtaatattggtgtgttgtttttcttcctttctctcttatctttgttgctttgaatatgtttgtggtgatgtttcaca 33721725  T
Q  316 cttagatttaagtcagtttgttgttgttgcttgaa 350  Q
    ||||||| || |   ||||||||||||||||||||    
T  33721726 cttagatctagggatgtttgttgttgttgcttgaa 33721760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 2 - 238
Target Start/End: Original strand, 5757328 - 5757565
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctctt-aggattcatt-----gagagtgtgggt 95  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||| ||||| ||  | || ||||||| ||| ||||||     ||||| ||||      
T  5757328 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaa-gcttccttccgtgtcttctctttagggttcattattgagagagagtggaa 5757426  T
Q  96 gacttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggaga 194  Q
     ||    ||| || ||||||||| || |||||||| | | ||||||||||||| ||||||||||| | |||||| |||||| ||| || |||||||||||    
T  5757427 cac----aaatgggtagaaattaggtcttgttcttgtataagcttgcaagctattttcttgtaactc-tttgtaacactttcatcatagtggattggaga 5757521  T
Q  195 gctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||| ||||||||| | |||||||||||||||||||||||||    
T  5757522 gctgctctctcccccagattaggtcatattggaccgaactgggt 5757565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 46 - 206
Target Start/End: Original strand, 1114998 - 1115159
Alignment:
Q  46 aaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttgaaaaa-ggatagaaattatgttttgttctttgtgagcttgcaag 144  Q
    ||||||| ||| ||||| |||||||||||  |||||||| ||||||||||||||||||||| |||||||||||| | |||||| ||| |||||||  |||    
T  1114998 aaaaaagtttccttttgtgttttctcttaatattcattgtgagtgtgggtgacttgaaaaatggatagaaattagggtttgttatttttgagcttttaag 1115097  T
Q  145 ctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcc 206  Q
     | |||||||||||||  ||||||||| | | ||| || ||||||||||| ||||| |||||    
T  1115098 ttgatttcttgtaacctatttgtatcattcttatcatagtggattggagatctgctctctcc 1115159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 84 - 231
Target Start/End: Complemental strand, 27165849 - 27165700
Alignment:
Q  84 gagagtgtgggtgacttgaaaaa-ggatagaaattatgttttgttctttgtgagcttgcaagctaa-tttcttgtaacccctttgtatcactttgatcct 181  Q
    |||||||||||| |||| ||||| |||||||||||  |||||||||| | | ||||   | ||||| ||| |||||||||| |||||||||||| ||| |    
T  27165849 gagagtgtgggtaacttcaaaaatggatagaaattcagttttgttctctataagctcttatgctaatttttttgtaaccccgttgtatcactttcatctt 27165750  T
Q  182 aatggattggagagctgctatctcccccatagtaggtcatattggaccga 231  Q
    | | |||||||| ||| || | ||||||||||||||||||||||||||||    
T  27165749 agttgattggagggctactctgtcccccatagtaggtcatattggaccga 27165700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 110 - 238
Target Start/End: Complemental strand, 21356175 - 21356046
Alignment:
Q  110 tagaaattatgttttgttctt-tgtgagcttgcaagctaattt-cttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctccc 207  Q
    ||||||||| || |||||||| ||| |||||||||| || ||| |||||||| | || ||| |||||| ||| || ||||||||||||||||| |||||     
T  21356175 tagaaattaggtcttgttcttgtgtaagcttgcaagttatttttcttgtaactc-ttagtaacactttcatcatagtggattggagagctgctctctcct 21356077  T
Q  208 ccatagtaggtcatattggaccgaactgggt 238  Q
    ||| | |||||||||||||||||||||||||    
T  21356076 ccagattaggtcatattggaccgaactgggt 21356046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 159
Target Start/End: Complemental strand, 99357 - 99245
Alignment:
Q  47 aaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttgaaaaaggatagaaattatgttttgttctttgtgagcttgcaagct 146  Q
    |||||||||| ||| |  ||||||| |||||||||||| ||||||| || |||| |||| || |||||||||   |||||||| |||||||||  |||||    
T  99357 aaaaagcttcctttggtattttctcataggattcattgtgagtgtgagtaacttaaaaatgggtagaaattaaagtttgttctctgtgagcttctaagct 99258  T
Q  147 aatttcttgtaac 159  Q
    |||||||||||||    
T  99257 aatttcttgtaac 99245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 173
Target Start/End: Original strand, 30517998 - 30518150
Alignment:
Q  21 agtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcatt-gagagtgtgggtgacttgaaaaag-gatagaaatta 118  Q
    ||||||||||||  ||||||||||| ||||| |||| ||| | ||||||||| || ||||||| | |||||||||| ||||||||||  | |||||||||    
T  30517998 agtgagatttcattattggaaggatcaaaaa-cttcctttagtgttttctctaag-attcatttgtgagtgtgggtaacttgaaaaataggtagaaatta 30518095  T
Q  119 tgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcact 173  Q
     | |||||||||||||| |||  ||| || |||| ||||||| ||||||||||||    
T  30518096 aggtttgttctttgtgaacttttaagttagtttcatgtaacctctttgtatcact 30518150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 164 - 322
Target Start/End: Original strand, 5017482 - 5017641
Alignment:
Q  164 ttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttc 262  Q
    ||||| |||||| ||| || | |||||||| | |||| ||||||| | | ||||||||||| |||||||||||||  || || |||||||||||| || |    
T  5017482 ttgtaacactttcatcatagtagattggagggttgctctctcccctagattaggtcatatttgaccgaactgggtcaacaatcttggtgtgtttg-ttcc 5017580  T
Q  263 tttcttgc-tttcttatcttgttgttttgattatgtttgtggtgatgctttacacttagat 322  Q
    |||||| | || ||||||||  || |||||||||| |||||||| |||| |||||||||||    
T  5017581 tttctttcattgcttatctttgtgctttgattatgcttgtggtgttgctctacacttagat 5017641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 5674753 - 5674845
Alignment:
Q  135 agcttgcaagctaat--ttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattgg 226  Q
    ||||||||||||| |  |||||||||||| |||||| |||||| ||| || ||||||||||||||||| ||||||||| | |||| ||||||||    
T  5674753 agcttgcaagctattgtttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattgg 5674845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 22709257 - 22709208
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaa 51  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||||    
T  22709257 cattgtaaacaccttggatagtgagatttcaccattggaaggatcaaaaa 22709208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 5017346 - 5017405
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttcttttt 61  Q
    ||||||||||||| ||| || |||||||||||||||||||||||  ||||||||| ||||    
T  5017346 cattgtaaacaccttgggtaatgagatttcaccattggaaggatcgaaaagcttcctttt 5017405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 2973094 - 2973018
Alignment:
Q  101 gaaaaaggatagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||| || ||||||||| |||| ||||||||||||||||   |||||||||||||||||||| |||||||| |||||    
T  2973094 gaaaatgggtagaaattaggttt-gttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttg 2973018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 5385824 - 5385750
Alignment:
Q  20 tagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtggg 94  Q
    |||||||||||||||||| |||||||||||||||||  ||| | |||| ||||| ||||| ||| |||| |||||    
T  5385824 tagtgagatttcaccattagaaggataaaaaagctttctttagtgtttcctcttgggatttattaagagagtggg 5385750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 12195575 - 12195521
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||||||| |||||| ||||||||| | ||||||| |||||||||||||||||    
T  12195575 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggt 12195521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 160
Target Start/End: Original strand, 16569046 - 16569107
Alignment:
Q  101 gaaaaaggatagaaattatgttttgttctttgtgagcttg--caagctaatttcttgtaacc 160  Q
    ||||| || ||||||||| |||||||||||||||||||||   |||||||||||||||||||    
T  16569046 gaaaatgggtagaaattaggttttgttctttgtgagcttgtttaagctaatttcttgtaacc 16569107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 234
Target Start/End: Complemental strand, 22709102 - 22709032
Alignment:
Q  164 ttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattggaccgaact 234  Q
    ||||| |||||| ||| || ||||||||||||||||| ||||||||| | ||| |||||||| ||||||||    
T  22709102 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattagatcatattgaaccgaact 22709032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 603234 - 603167
Alignment:
Q  110 tagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    |||||||| ||| ||||||||||||||||||   |||||||||||||||||||| |||||||| |||||    
T  603234 tagaaatt-tgtgttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttg 603167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 17758057 - 17758112
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||||||||   |||||||||||||||||||| |||||||| |||||    
T  17758057 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttg 17758112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 21588965 - 21589020
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||||||||   |||||||||||||||||||| |||||||| |||||    
T  21588965 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttg 21589020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 21593698 - 21593753
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||||||||   |||||||||||||||||||| |||||||| |||||    
T  21593698 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttg 21593753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 5165874 - 5165819
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcat-attggaccgaactgggt 238  Q
    |||| ||||||| |||||||||||||| |||||||||| ||| |||||||||||||    
T  5165874 tggaatggagagttgctatctcccccagagtaggtcatcattagaccgaactgggt 5165819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 4816291 - 4816237
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||||||| |||||| ||||||||| | |||||||  ||||||||||||||||    
T  4816291 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggt 4816237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 5273276 - 5273222
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||||||| |||||| ||||||||| | |||||||  ||||||||||||||||    
T  5273276 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggt 5273222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 226
Target Start/End: Complemental strand, 11857038 - 11856996
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattgg 226  Q
    ||||||||||||||||| ||||||||||| |||| ||||||||    
T  11857038 tggattggagagctgctctctcccccatattaggccatattgg 11856996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 226
Target Start/End: Original strand, 14742457 - 14742499
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattgg 226  Q
    ||||||||||||||||| ||||||||| | |||||||||||||    
T  14742457 tggattggagagctgctctctcccccaaattaggtcatattgg 14742499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 160
Target Start/End: Original strand, 16554883 - 16554941
Alignment:
Q  103 aaaaggatagaaattatgttttgttctttgtgagcttg-caagctaatttcttgtaacc 160  Q
    |||||| ||||||||| | ||||||| |||||| |||| ||||||||||||||||||||    
T  16554883 aaaagggtagaaattagggtttgttcattgtgaacttgtcaagctaatttcttgtaacc 16554941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 160
Target Start/End: Original strand, 16631439 - 16631497
Alignment:
Q  103 aaaaggatagaaattatgttttgttctttgtgagcttg-caagctaatttcttgtaacc 160  Q
    |||||| ||||||||| | ||||||| |||||| |||| ||||||||||||||||||||    
T  16631439 aaaagggtagaaattagggtttgttcattgtgaacttgtcaagctaatttcttgtaacc 16631497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 19704627 - 19704573
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||||||| |||||| ||||||||| | |||||||  ||||||||||||||||    
T  19704627 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggt 19704573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 20915416 - 20915362
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||||||| |||||| ||||||||| | |||||||  ||||||||||||||||    
T  20915416 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggt 20915362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 26932622 - 26932568
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||||||| | |||| ||||||||| | ||||||| |||||||||||||||||    
T  26932622 tggattggagggttgctctctcccccagactaggtcagattggaccgaactgggt 26932568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 160
Target Start/End: Original strand, 27647875 - 27647933
Alignment:
Q  103 aaaaggatagaaattatgttttgttctttgtgagcttg-caagctaatttcttgtaacc 160  Q
    |||||| ||||||||| | ||||||| |||||| |||| ||||||||||||||||||||    
T  27647875 aaaagggtagaaattagggtttgttcattgtgaacttgtcaagctaatttcttgtaacc 27647933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 29754769 - 29754715
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||||| |||| |||||| ||||||||| | ||||||| |||||||||||||||||    
T  29754769 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggt 29754715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 30967455 - 30967509
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||||| ||||||||||| ||||||||| | |||||||  ||||||||||||||||    
T  30967455 tggatcggagagctgctctctcccccaaactaggtcaatttggaccgaactgggt 30967509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 33309110 - 33309164
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||||| |||| |||||| ||||||||| | ||||||| |||||||||||||||||    
T  33309110 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggt 33309164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 33311379 - 33311433
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||||| |||| |||||| ||||||||| | ||||||| |||||||||||||||||    
T  33311379 tggatcggagggctgctttctcccccagactaggtcagattggaccgaactgggt 33311433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 176
Target Start/End: Original strand, 5043660 - 5043716
Alignment:
Q  122 tttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    |||||||||||||||||||   |||||||||||||||||| | |||||||| |||||    
T  5043660 tttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttg 5043716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 340
Target Start/End: Complemental strand, 20504857 - 20504792
Alignment:
Q  275 ttatcttgttgttttgattatgtttgtggtgatgctttacacttagatttaagtcagtttgttgtt 340  Q
    |||| |||||| |||| ||||| |||||||| | ||||||||| |||| || ||||||||||||||    
T  20504857 ttattttgttgctttgtttatgcttgtggtgttcctttacactaagatctacgtcagtttgttgtt 20504792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 169
Target Start/End: Complemental strand, 28137542 - 28137494
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtat 169  Q
    ||||||||||||||||||   |||||||||||||||||||| |||||||    
T  28137542 ttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtat 28137494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 30834690 - 30834615
Alignment:
Q  102 aaaaaggatagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||| ||||||||| | || ||||||||||| ||||   |||||||||||||||||||| |||||||| |||||    
T  30834690 aaaaagggtagaaattagggtt-gttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttg 30834615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 5406334 - 5406279
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||| ||||   |||||||||||||||||||| |||||||| |||||    
T  5406334 ttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttg 5406279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 5410659 - 5410604
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||| ||||   |||||||||||||||||||| |||||||| |||||    
T  5410659 ttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttg 5410604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 169
Target Start/End: Complemental strand, 20505009 - 20504937
Alignment:
Q  97 acttgaaaaaggatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtat 169  Q
    ||||||||| |  ||||||||| | ||| || ||| |||||||| || |||||||||||||||| ||||||||    
T  20505009 acttgaaaatgagtagaaattaaggttttttatttttgagcttgtaaactaatttcttgtaacctctttgtat 20504937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 21356284 - 21356225
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttg 62  Q
    ||||||||||||| ||| ||||||||||||| ||||||||| ||  ||||||||| |||||    
T  21356284 cattgtaaacaccttgggtagtgagatttcatcattggaagaat-caaaagcttccttttg 21356225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 26830257 - 26830202
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||||||||   ||||||||||||||||| || |||||||| |||||    
T  26830257 ttgttctttgtgagcttgttgaagctaatttcttgtaatccatttgtatctctttg 26830202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 31404809 - 31404754
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||| ||||   |||||||||||||||||||| |||||||| |||||    
T  31404809 ttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttg 31404754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 132; Significance: 2e-68; HSPs: 86)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 2 - 325
Target Start/End: Original strand, 18552724 - 18553049
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| ||||| |||| ||||| |||||||||||||||||||||||||||||||||||       
T  18552724 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaaacttccttttgtgttttctcttaggattcattgagagtgtgggtgac-ac 18552822  T
Q  102 aaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgct 200  Q
    |||| || ||||||||| || |||||||| ||| |||||  |||||||||||||||||| | |||||| |||||| ||| || |||||||||| ||||||    
T  18552823 aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 18552922  T
Q  201 atctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgattatgt 297  Q
     ||||||||| | |||||||||||||||||||||||||  || || ||||||| |||| || ||||||| | ||  ||||| || ||| |||||||||||    
T  18552923 ctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtatttg-ttcctttctttcattgattatctttattgctttgattatgt 18553021  T
Q  298 ttgtggtgatgctttacacttagattta 325  Q
    |||||||| |||| ||||||||||||||    
T  18553022 ttgtggtgttgctctacacttagattta 18553049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 2 - 348
Target Start/End: Original strand, 40592621 - 40592974
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattc--attgagagtgtgggtgact 99  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||  |||| ||| |||||||||     
T  40592621 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcatattgtgagagtgggtgac- 40592719  T
Q  100 tgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctg 198  Q
      |||| || |||||||||  |||||||||| ||| |||||| |||||||||||||||||| | |||||| |||||| ||| || | ||||||||||||     
T  40592720 acaaaatgggtagaaattagattttgttcttgtgtaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtcgattggagagctt 40592819  T
Q  199 ctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatct-tgttgttttgattat 295  Q
    || |||||| || | |||||||||||||||||||||||||  || || ||||||||||||||   |||||| | || ||||||| | ||| |||||||||    
T  40592820 ctctctcccacagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttccttttctttcattgcttatctatattgctttgattat 40592919  T
Q  296 gtttgtggtgatgctttacacttagatttaagtcag--tttgttgttgttgcttg 348  Q
    | |||||||| |||| |||||||||||||| ||| |  |||||||||||||||||    
T  40592920 gcttgtggtgttgctctacacttagatttaggtctgtttttgttgttgttgcttg 40592974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 2 - 259
Target Start/End: Original strand, 1736143 - 1736404
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattc---attgagagtgtgggtgac 98  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||   ||||||||||| ||||||    
T  1736143 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttctttttgtgttttctcttaggattcattattgagagtgttggtgac 1736242  T
Q  99 ttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagct 197  Q
       |||| || ||||||||| || |||||||| ||| |||||  ||| |||||||||||||| | |||||| |||||| ||| || |||||||||| |||    
T  1736243 -acaaaatgggtagaaattaggtcttgttcttgtgtaagcttataagttaatttcttgtaactcttttgtaacactttcatcatagtggattggagggct 1736341  T
Q  198 gctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgtt 259  Q
    ||| ||||||||| | |||||||||||||||||||||||||  || |||||||||||||||||    
T  1736342 gctctctcccccagattaggtcatattggaccgaactgggtcaacaatattggtgtgtttgtt 1736404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 5 - 324
Target Start/End: Complemental strand, 25796024 - 25795702
Alignment:
Q  5 tgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttgaaa 104  Q
    |||||||||| ||| |||||||||||||||||||||||||| |||||||||| ||||  |||||||||||||||||||||||||||||||||||   |||    
T  25796024 tgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttatgttttctcttaggattcattgagagtgtgggtgac-acaaa 25795926  T
Q  105 aaggatagaaattatgttttgttc-tttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatc 203  Q
    | || ||||||||| || |||||| ||||| |||||  |||||||||||||||||| | || ||| |||||| ||| || | ||||||||||||||| ||    
T  25795925 atgggtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaactctttcgtaacactttcatcttagtagattggagagctgctctc 25795826  T
Q  204 tcccccatagtaggtcatattggaccgaactgggttacca--tattggtgtgtttgt---tttctttc-ttgctttcttatcttgttgttttgattatgt 297  Q
    ||||||| | ||||||||||||||||||||| ||| | ||    |||||||||||||   |||||||| ||||||  ||   || ||||||| ||||||     
T  25795825 tcccccagattaggtcatattggaccgaactaggtcaacaatctttggtgtgtttgttcatttctttcattgcttattt---ttattgtttttattatgc 25795729  T
Q  298 ttgtggtgatgctttacacttagattt 324  Q
    |||||||| |||| |||||||||||||    
T  25795728 ttgtggtgttgctctacacttagattt 25795702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 2 - 348
Target Start/End: Complemental strand, 48438463 - 48438110
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattc---attgagagtgtgggtgac 98  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||| |||||||||| ||||| |||||||||||||||||   ||||||||||||||||||    
T  48438463 cattgtaaacaccttgggtagtgagatttcaccattggaatgatcaaaaagcttccttttgtgttttctcttaggattcattattgagagtgtgggtgac 48438364  T
Q  99 ttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagct 197  Q
       |||| || ||||||||| || |||||||| ||| |||||  | |||||||||||||||| | |||||| |||||| ||| || |||||||||| |||    
T  48438363 -acaaaatgggtagaaattaggtcttgttcttgtgtaagcttatatgctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggct 48438265  T
Q  198 gctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttct-tgctttcttatc-ttgttgttttgatta 294  Q
    ||| ||||||||| | ||||||||||||||||||||| |||  |  || |||||||||||| || |||||| |  ||  ||||| || ||||||||||||    
T  48438264 gctctctcccccagattaggtcatattggaccgaactaggtcaataatcttggtgtgtttg-ttcctttctgtcattgtttatctttattgttttgatta 48438166  T
Q  295 tgtttgtggtgatgctttacacttagatttaagtcag--tttgttgttgttgcttg 348  Q
    || |||||||| |||| ||||||||||| || ||| |  |||||||||||||||||    
T  48438165 tgcttgtggtgttgctctacacttagatctaggtctgtttttgttgttgttgcttg 48438110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 2 - 348
Target Start/End: Original strand, 3715841 - 3716193
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattc--attgagagtgtgggtgact 99  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||||||||  ||||| |||||||||||||||||  |||| ||  |||||||||     
T  3715841 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagctttcttttgtgttttctcttaggattcatattgtgaaagtgggtgac- 3715939  T
Q  100 tgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctg 198  Q
      |||| || ||||||||| || |||||||| ||| || ||| |||||||||||||||||| | |||||| |||||| ||| || | |||||||||||||    
T  3715940 acaaaatgggtagaaattaagtcttgttcttgtgtaagtttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtagattggagagctg 3716039  T
Q  199 ctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgattat 295  Q
    || |||| || | | |||||||||||||||||||||||||  || || |||||||||||| || || |||| | || |||||| || ||||| |||||||    
T  3716040 ctctctctcctagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttg-ttcctctctttcattgcttatctttattgttgtgattat 3716138  T
Q  296 gtttgtggtgatgctttacacttagatttaagtcag--tttgttgttgttgcttg 348  Q
    | |||||||| |||| |||||||||||||| ||| |  |||||||||||||||||    
T  3716139 gcttgtggtgttgctctacacttagatttatgtctgtttttgttgttgttgcttg 3716193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 2 - 348
Target Start/End: Original strand, 8370328 - 8370678
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcat--tgagagtgtgggtgact 99  Q
    ||||||||||| | ||| |||||||||||||||||||||||||| |||| | ||| ||||| |||||||||||||||||||  || ||| |||||||||     
T  8370328 cattgtaaacatcttgggtagtgagatttcaccattggaaggatcaaaa-gtttccttttgtgttttctcttaggattcatattgtgagagtgggtgaca 8370426  T
Q  100 tgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctg 198  Q
       ||| || |||||||||||| |||||||| ||| |||||  |||||||||||||||||| | |||||| |||||| ||| || |||||||||||||||    
T  8370427 c--aaatgggtagaaattatgtcttgttcttgtgtaagcttttaagctaatttcttgtaactc-tttgtaacactttcatcatagtggattggagagctg 8370523  T
Q  199 ctatctcccccatagtaggtcatattggaccgaactgggttacca---tattggtgtgtttgttttctttcttgc-tttcttatcttgttgttttgatta 294  Q
    || ||||||||| | ||||||||||||||||||||||||| | ||   | |||||||||||| || ||||||| | || ||||||||  || ||||||||    
T  8370524 ctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttg-ttcctttctttcattgcttatctttgtgctttgatta 8370622  T
Q  295 tgtttgtggtgatgctttacacttagatttaagtcag--tttgttgttgttgcttg 348  Q
    || |||||||| |||| ||||||||||| || ||| |  |||||||||||||||||    
T  8370623 tgcttgtggtgttgctctacacttagatctaggtctgtttttgttgttgttgcttg 8370678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 2 - 344
Target Start/End: Original strand, 3328196 - 3328540
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    ||||||||||||| ||| ||||||||||||| |||||||||||| ||||| |||| ||||| ||||||||||||||| ||||||||||||||||||  ||    
T  3328196 cattgtaaacaccttgggtagtgagatttcagcattggaaggatcaaaaaacttccttttgtgttttctcttaggatacattgagagtgtgggtgatatg 3328295  T
Q  102 aaaaa-ggatagaaattatgttttgttc-tttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgc 199  Q
    ||||| || ||||||||| |  |||||| ||||| |||||  ||||||||||||||||| | | ||||| |||||| ||| || ||||||| || |||||    
T  3328296 aaaaatgggtagaaattaggacttgttcttttgtaagcttataagctaatttcttgtaa-ctcattgtaacactttcatcttagtggattgaagggctgc 3328394  T
Q  200 tatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgattatg 296  Q
    | ||||| | | | ||||||||||||||  |||||||||  || || |||||||||||| || || |||| | || |||||| || ||||||||||||||    
T  3328395 tctctcctctagattaggtcatattggaatgaactgggtcaacaatcttggtgtgtttg-ttcctctctttcattgcttatctttattgttttgattatg 3328493  T
Q  297 tttgtggtgatgctttacacttagatttaagtcagtttgttgttgttg 344  Q
     |||||||| |||| |||||||||||||| ||| |||| |||||||||    
T  3328494 cttgtggtgttgctctacacttagatttaggtctgttt-ttgttgttg 3328540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 2 - 344
Target Start/End: Complemental strand, 26299235 - 26298891
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagctt-ctttttgggttttctcttaggattcattgagagtgtgggtgactt 100  Q
    ||||||||||||| ||| ||||||||||||||||||||||  || ||||||||| ||||||| |||||||||||||||| ||||||| ||||||||||      
T  26299235 cattgtaaacaccttgggtagtgagatttcaccattggaattatcaaaaagcttcctttttgtgttttctcttaggattaattgagattgtgggtgac-a 26299137  T
Q  101 gaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgc 199  Q
     |||| || ||||||||| || |||||||| | | || ||  |||||||||||||||||| | |||||| |||||| ||| || | |||||||| |||||    
T  26299136 caaaatgggtagaaattaggtcttgttcttgtctaagtttataagctaatttcttgtaactcttttgtaacactttcatcatagtagattggagggctgc 26299037  T
Q  200 tatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgattatg 296  Q
    | ||||||||| | || ||||||||| ||||||||||||  || || |||||||||||| || || |||| | || |||||| || ||| ||||||||||    
T  26299036 tctctcccccagattatgtcatattgaaccgaactgggtcaacaatcttggtgtgtttg-ttcctctctttcgttgcttatctttattgctttgattatg 26298938  T
Q  297 tttgtggtgatgctttacacttagatttaagtcagtttgttgttgttg 344  Q
     |||||||| |||| |||||||||||||| ||| |||| |||||||||    
T  26298937 cttgtggtgttgctctacacttagatttaggtctgttt-ttgttgttg 26298891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 153 - 325
Target Start/End: Original strand, 25929435 - 25929608
Alignment:
Q  153 ttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggttaccatattggtgt 252  Q
    ||||||| | ||||||||||||| ||| || |||||||||| |||||| || |||||| |||||||| |||||||||||||||||||||||| |||||||    
T  25929435 ttgtaactcatttgtatcactttcatcttagtggattggagggctgctctc-cccccagagtaggtcgtattggaccgaactgggttaccatcttggtgt 25929533  T
Q  253 gtttg-ttttctttcttgctttcttatc-ttgttgttttgattatgtttgtggtgatgctttacacttagattta 325  Q
    ||||| |||||||||||||||||||||| |||||| ||||||||||||||||||| |||| ||||||||||||||    
T  25929534 gtttgtttttctttcttgctttcttatctttgttgctttgattatgtttgtggtgttgctctacacttagattta 25929608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 2 - 193
Target Start/End: Complemental strand, 8126877 - 8126685
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    ||||||||||||| ||| ||||||||||||| |||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||       
T  8126877 cattgtaaacaccttgggtagtgagatttcatcattggaaggatcaaaaagcttctttttgtgttttctcttaagattcattgagagtgtgggtgacaca 8126778  T
Q  102 aaaaaggatagaaattatgttttgttc-tttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggag 193  Q
    |||| || ||||||||| || |||||| ||||| |||||  |||||||||||||||||| | |||||| |||||| ||| || ||||||||||    
T  8126777 aaaatgggtagaaattaagtattgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcgtagtggattggag 8126685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 78 - 222
Target Start/End: Original strand, 4386843 - 4386988
Alignment:
Q  78 ttcattgagagtgtgggtgacttgaaaaagga-tagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||| ||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||  |||||||||||||||||||| |||||||||||||     
T  4386843 ttcatcgagagtgtgggtgacttgaaaaatgagtagaaattaggttttgttctttgtgagcttttaagctaatttcttgtaacccatttgtatcactttt 4386942  T
Q  177 atcctaatggattggagagctgctatctcccccatagtaggtcata 222  Q
    ||| || ||||||||||||||||| ||||||||| |||||||||||    
T  4386943 atcttattggattggagagctgctctctcccccagagtaggtcata 4386988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 2 - 348
Target Start/End: Original strand, 30709628 - 30709982
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcatt---gagagtgtgggtgac 98  Q
    ||||||||||||| |||  |||||||||||| |||||||| ||| ||| |||||| ||||| ||||||||||||||||||||   |||||||||||||||    
T  30709628 cattgtaaacaccttggggagtgagatttcatcattggaatgatcaaatagcttccttttgtgttttctcttaggattcattattgagagtgtgggtgac 30709727  T
Q  99 ttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagct 197  Q
       || | || ||||||||| || ||| |||| ||| |||||  |||||||||||||||||| | |||||| || ||| ||| || |||||||||| |||    
T  30709728 ac-aagatgggtagaaattaggtcttgctcttgtgtaagcttataagctaatttcttgtaactcttttgtaacaatttcatcatagtggattggagggct 30709826  T
Q  198 gctatctcccccatagtaggtcatattggaccgaactgggttacca---tattggtgtgtttgttttctttcttgc-tttcttatcttgttgttttgatt 293  Q
    ||| ||||||||| | ||||||||||||||||||||||||| | ||   | |||||||||||| || ||||||| | || ||||||||  || |||||||    
T  30709827 gctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttg-ttcctttctttcattgcttatctttgtgctttgatt 30709925  T
Q  294 atgtttgtggtgatgctttacacttagatttaagtcag--tttgttgttgttgcttg 348  Q
    ||| || ||||| |||| || |||||||| || ||| |  |||||||||||||||||    
T  30709926 atgcttatggtgttgctctaaacttagatctaggtctgtttttgttgttgttgcttg 30709982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 2 - 348
Target Start/End: Original strand, 6794554 - 6794903
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcat--tgagagtgtgggtgact 99  Q
    ||||||||||||| ||| |||||||||||||||||||||| || | ||||||||| |||||  |||||||||||| |||||  || ||| |||||||||     
T  6794554 cattgtaaacaccttgggtagtgagatttcaccattggaatga-acaaaagcttccttttgtattttctcttagggttcatattgtgagagtgggtgaca 6794652  T
Q  100 tgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaattt-cttgtaacccctttgtatcactttgatcctaatggattggagagct 197  Q
       ||| || ||||||||| |  |||||||| ||| ||||||||||||||||| |||||||| | |||||| |||||| ||| || ||||||||||||||    
T  6794653 c--aaatgggtagaaattaggacttgttcttgtgtaagcttgcaagctaattttcttgtaactc-tttgtaacactttcatcatagtggattggagagct 6794749  T
Q  198 gctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatct-tgttgttttgatta 294  Q
    ||| ||||||||||| |||||||||||||||| ||| ||||  || || |||||||||||| || ||||||| | || ||||||| | ||| ||||||||    
T  6794750 gctctctcccccatattaggtcatattggacctaaccgggtcaacaatcttggtgtgtttg-ttcctttctttcattgcttatctctattgctttgatta 6794848  T
Q  295 tgtttgtggtgatgctttacacttagatttaagtcag-tttgttgttgttgcttg 348  Q
    || ||||| || | || |||||||||||||| ||| | |||||||||||||||||    
T  6794849 tgcttgtgatgctactctacacttagatttaggtctgttttgttgttgttgcttg 6794903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 2 - 238
Target Start/End: Complemental strand, 36029340 - 36029103
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcat--tgagagtgtgggtgact 99  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||| ||||| ||||| |||||||||||||||||||  |  ||| ||| |||||     
T  36029340 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaa-gcttccttttgtgttttctcttaggattcatattttgagagtgagtgaca 36029242  T
Q  100 tgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctg 198  Q
      |||| || ||||||||| || |||||||| ||| || ||| |||||||||||||||||| | |||||| |||||| ||| || |||||||||||||||    
T  36029241 c-aaaatgggtagaaattaggtcttgttcttgtgtaagtttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctg 36029143  T
Q  199 ctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    || ||||||||| | ||||||||||||||| |||||||||    
T  36029142 ctttctcccccagattaggtcatattggacagaactgggt 36029103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 2 - 227
Target Start/End: Original strand, 3323530 - 3323756
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||| |||||||||| ||||| |||||||||||| |||||||||||||||||||||  ||    
T  3323530 cattgtaaacaccttgggtagtgagatttcaccattggaatgatcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgggtgatatg 3323629  T
Q  102 aa-aaaggatagaaattatgttttgttc-tttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgc 199  Q
    || || || |||||||||||  |||||| ||||| |||||  ||||||||||||||||| | | ||||| |||||| ||| || |||||||||| ||||     
T  3323630 aacaatgggtagaaattatgacttgttcttttgtaagcttataagctaatttcttgtaa-ctcattgtaacactttcatcttagtggattggagggctgt 3323728  T
Q  200 tatctcccccatagtaggtcatattgga 227  Q
    | |||| |||| | ||||||||||||||    
T  3323729 tctctctcccagattaggtcatattgga 3323756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 2 - 259
Target Start/End: Complemental strand, 21711469 - 21711211
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcatt---gagagtgtgggtgac 98  Q
    ||||||||||||| ||  |||||||||||||||||||||||||| |||| ||||| ||||| ||||||||||||||||||||   |||||||||||| ||    
T  21711469 cattgtaaacaccttgagtagtgagatttcaccattggaaggatcaaaa-gcttccttttgtgttttctcttaggattcattattgagagtgtgggtaac 21711371  T
Q  99 ttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagct 197  Q
        ||| || ||||||||| || ||| |||| ||| |||||  |||||||||||||||||| | |||||| |||||| ||| || |||||| |||||||    
T  21711370 ac--aaatgggtagaaattaggtcttgctcttgtgtaagcttttaagctaatttcttgtaactc-tttgtaacactttcatcatagtggatttgagagct 21711274  T
Q  198 gctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgtt 259  Q
    ||| ||||||||| | |||||||||||||||||||||||||  || || ||||||||||||||    
T  21711273 gctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgtt 21711211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 32 - 235
Target Start/End: Complemental strand, 40844867 - 40844665
Alignment:
Q  32 accattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttgaaaaaggatagaaattatgttttgttctt- 130  Q
    |||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||   |||| || ||||||||| || ||||||||     
T  40844867 accattggaaggatcaaaaagcttccttttgtgttttctcttaggattcattgagagtgtgggtgac-acaaaatgggtagaaattaggtcttgttcttg 40844769  T
Q  131 tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattggaccg 230  Q
    ||| |||||  |||||||||||||||||| | |||||| |||||| ||| || |||||| ||| |||||| ||| ||||| | |||||||||||||||||    
T  40844768 tgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggatttgagggctgctctct-ccccagattaggtcatattggaccg 40844670  T
Q  231 aactg 235  Q
    |||||    
T  40844669 aactg 40844665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 2 - 259
Target Start/End: Original strand, 24695005 - 24695263
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    ||||||||||||| ||| | |||||||||||||||||||| ||| |||||||||| ||||| ||||||| |||||||||||||||||||||||||||       
T  24695005 cattgtaaacaccttgggtggtgagatttcaccattggaatgatcaaaaagcttccttttgtgttttcttttaggattcattgagagtgtgggtgac-ac 24695103  T
Q  102 aaaaaggatagaaattatgttttgttc-tttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgct 200  Q
    |||| || ||||||||| || |||||| ||||| || ||  |||||||||||||||||| | |||||| |||||| ||| ||  ||||| ||| | ||||    
T  24695104 aaaatgggtagaaattaggtcttgttcttttgtaagtttataagctaatttcttgtaactcttttgtaacactttcatcatagcggattagagggttgct 24695203  T
Q  201 atctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgtt 259  Q
     ||||||  | | ||||||||||||||||||||| |||  || || ||||||||||||||    
T  24695204 ctctcccgtagattaggtcatattggaccgaactaggtcaacaatcttggtgtgtttgtt 24695263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 2 - 350
Target Start/End: Original strand, 1417330 - 1417682
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    ||||||||||||  | | ||||||||||||||||||| |||||| |||||| ||  ||||| ||||||||||||||||||||| ||||||||||||  ||    
T  1417330 cattgtaaacactttaggtagtgagatttcaccattgaaaggatcaaaaagttttcttttgtgttttctcttaggattcattgggagtgtgggtgatatg 1417429  T
Q  102 aaaaa-ggatagaaattatgttttgttc-tttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgc 199  Q
    ||||| || ||||||||| |  |||||| ||||| || ||  ||||||||||||| ||| | | ||||| ||||||  || || |||||||||| | |||    
T  1417430 aaaaatgggtagaaattaggacttgttcttttgtaagtttataagctaatttcttataa-ctcattgtaacactttcttcttagtggattggagggatgc 1417528  T
Q  200 tatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgattatg 296  Q
    | ||||||||| | |||||||||||||||||||||||||  || || |||||||||||| || || |||| | || |||||| || ||| ||||||||||    
T  1417529 tctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttg-ttcctctctttcattgcttatctttattgctttgattatg 1417627  T
Q  297 tttgtggtgatgctttacacttagatttaagtcag-tttgttgttgttgcttgaa 350  Q
     ||||| || | || |||||||||||||| ||  | |||||||||||||||||||    
T  1417628 cttgtgatgttactctacacttagatttatgtatgttttgttgttgttgcttgaa 1417682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 2 - 259
Target Start/End: Original strand, 47923743 - 47924005
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattc---attgagagtgtgggtgac 98  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||||||||| ||||| |||||||| ||||||||   ||||||||||||| ||||    
T  47923743 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcgtaggattcattattgagagtgtggatgac 47923842  T
Q  99 ttgaaaaaggatagaaattatgttttgttctttgtg--agcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagc 196  Q
       |||| || || |||||| |||||| ||||||||  | |||  |||||||||||||||||| | |||||| |||||| ||| || | ||||| || ||    
T  47923843 -acaaaatgggtataaattaggttttgctctttgtgtaaacttttaagctaatttcttgtaactcttttgtagcactttcatcatagtagattgaagggc 47923941  T
Q  197 tgctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgtt 259  Q
    |||| ||||||| | | |||||||||||||| ||||||||||  || || ||||||||||||||    
T  47923942 tgctctctcccctagattaggtcatattggatcgaactgggtcaacaatcttggtgtgtttgtt 47924005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 2 - 322
Target Start/End: Complemental strand, 16264596 - 16264273
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcat---tgagagtgtgggtgac 98  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||| ||||| ||||| || |||||||||| |||||   |||||| |||||| ||    
T  16264596 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaa-gcttccttttgtgtcttctcttagggttcatcattgagagagtgggtaac 16264498  T
Q  99 ttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagct 197  Q
        ||| |  ||||||||| || |||||||| ||  ||||||||||||| ||||||||||| | |||||| |||||| ||| || ||||||||||||||    
T  16264497 ac--aaatgtgtagaaattaggtcttgttcttgtggaagcttgcaagctattttcttgtaactc-tttgtaacactttcatcatagtggattggagagct 16264401  T
Q  198 gctatctcccccatagtaggtcatattggaccgaactgggttacca---tattggtgtgtttgttttctttcttgc-tttcttatcttgttgttttgatt 293  Q
    ||| ||||||||| | ||||||||||||||||||||| ||| | ||   | || ||||||||| || ||||||| | ||  |||||||  || |||||||    
T  16264400 gctctctcccccagattaggtcatattggaccgaactaggtcaacaatctttttgtgtgtttg-ttcctttctttcattgtttatctttgtgctttgatt 16264302  T
Q  294 atgtttgtggtgatgctttacacttagat 322  Q
    |||||||||||| |||| |||||||||||    
T  16264301 atgtttgtggtgttgctctacacttagat 16264273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 39 - 349
Target Start/End: Complemental strand, 29100371 - 29100065
Alignment:
Q  39 gaaggataaaaaagcttctttttgggttttctcttaggattcattga-gagtgtgggtgacttgaaaaagga-tagaaattatgttttgttctttgtgag 136  Q
    |||||||||||||| ||| ||| |  || ||||||| |||||||| | |||||| |||||||||||||| || ||||||||| | |||||||||||||||    
T  29100371 gaaggataaaaaagtttcctttagtattatctcttatgattcatttatgagtgtaggtgacttgaaaaacgagtagaaattagggtttgttctttgtgag 29100272  T
Q  137 cttgcaagctaatttcttgtaacccctttgtatcact-ttgatcctaatggattggagagctgctatctcccccatagtaggtcatattggaccgaactg 235  Q
     ||  ||||||||||||| ||||| |||||||||||| || ||| || |||| |||||||||||| ||| ||| ||||| ||| || |||||||||||||    
T  29100271 tttttaagctaatttcttataacctctttgtatcactctttatcatagtggaatggagagctgctctcttccctatagtgggtaattttggaccgaactg 29100172  T
Q  236 ggt-taccatattggtgtgtttgttttctttcttgctttcttatcttgttgttttgattatgtttgtggtgatgctttacacttagatttaagtcagttt 334  Q
    |||  || ||||||||||| |||||||||||||    ||||    || ||| ||||| ||||||||||||| | ||| ||| |||||| ||  |||||||    
T  29100171 ggtaaacaatattggtgtg-ttgttttctttct---cttct----ttcttgctttgaatatgtttgtggtgtttcttcacagttagatctatctcagttt 29100080  T
Q  335 gttgttgttgcttga 349  Q
    |||||||||||||||    
T  29100079 gttgttgttgcttga 29100065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 2 - 344
Target Start/End: Complemental strand, 35925725 - 35925385
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattc--attgagagtgtgggtgact 99  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||  ||||||||| ||||| |||||||||||||||||  |||| ||| |||||||||     
T  35925725 cattgtaaacaccttgggtagtgagatttcaccattggaaggat-caaaagcttccttttgtgttttctcttaggattcatattgtgagagtgggtgac- 35925628  T
Q  100 tgaaaaaggatagaaattatgttttgttct-ttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctg 198  Q
       ||| || ||||||||| ||||||||||  ||| |||||  || |||||||||||||| | ||||||| |||||| ||| || ||||||||||| |||    
T  35925627 -acaaatgggtagaaattaggttttgttctagtgtaagcttataaactaatttcttgtaa-ctctttgtaacactttcatcatagtggattggagaactg 35925530  T
Q  199 ctatctcccccatagtaggtcatattggaccgaactgggttacca---tattggtgtgtttgttttctttcttgc-tttcttatcttgttgttttgatta 294  Q
    |   | | |||| | ||||||||||||||||||||| ||| | ||   | |||||||||||||| | |||||| | || || |||||  |||||||||||    
T  35925529 c---ccctcccaaattaggtcatattggaccgaactaggtcaacaatcttttggtgtgtttgttct-tttctttcattgctcatctttgtgttttgatta 35925434  T
Q  295 tgtttgtggtgatgctttacacttagatttaagtcagtttgttgttgttg 344  Q
    || |||||||| |||| ||||||||||| || ||| |||| |||||||||    
T  35925433 tgcttgtggtgttgctctacacttagatctaggtctgttt-ttgttgttg 35925385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 2 - 238
Target Start/End: Original strand, 27974791 - 27975029
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctctt-aggattcatt---gagagtgtgggtga 97  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||| ||||| ||||| || ||||||| ||| ||||||   |||||  ||||  |    
T  27974791 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaa-gcttccttttgtgtcttctctttagggttcattattgagagaatgggaaa 27974889  T
Q  98 cttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaattt-cttgtaacccctttgtatcactttgatcctaatggattggagag 195  Q
    |    ||| || ||||||||| || |||||||| ||| ||||||||||||| ||| |||||||| | |||||| |||||| ||| || ||||||||||||    
T  27974890 cac--aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaactc-tttgtaacactttcatcatagtggattggagag 27974986  T
Q  196 ctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||||| ||||||||| | |||||||||||||||||||||||||    
T  27974987 ctgctctctcccccagattaggtcatattggaccgaactgggt 27975029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 2 - 259
Target Start/End: Complemental strand, 37466542 - 37466279
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgact-- 99  Q
    ||||||||||||  ||| | |||||||||||||||||||| |||  ||||||||| ||||| ||||| | ||||||||||||||||||| |||||| |      
T  37466542 cattgtaaacactttgggttgtgagatttcaccattggaaagatcgaaaagcttccttttgtgttttattttaggattcattgagagtgcgggtgagtga 37466443  T
Q  100 --tgaaaaa-ggatagaaattatgttttgttc-tttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagag 195  Q
      ||||||| || ||||||||| |  |||||| ||||| |||||  ||  ||||||||||||| | | ||||| |||||| ||| || |||||||||| |    
T  37466442 tatgaaaaatgggtagaaattaggacttgttcttttgtaagcttataaattaatttcttgtaa-ctcattgtaacactttcatcttagtggattggaggg 37466344  T
Q  196 ctgctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgtt 259  Q
    || || ||||||||| | |||||||||||||||||||||| ||  || || ||||||||||||||    
T  37466343 ctactctctcccccagattaggtcatattggaccgaactgtgtcaacaatcttggtgtgtttgtt 37466279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 6 - 206
Target Start/End: Complemental strand, 21353806 - 21353604
Alignment:
Q  6 gtaaacaccctggttagtgagatt-tcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttgaaa 104  Q
    ||||||||  ||| |||||||| | ||||||||||||||||  ||||| ||| ||| | ||||||||||| |||||||||  |||||| ||| | |||||    
T  21353806 gtaaacactttgggtagtgagaatgtcaccattggaaggatccaaaagtttcctttagtgttttctcttaagattcattgtaagtgtgagtggcatgaaa 21353707  T
Q  105 aa-ggatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatc 203  Q
    || || ||||||||| ||| |||||||||||||||     |||||||||||||||| | ||||||||||||| ||| || |||||||||||| |||| ||    
T  21353706 aatgggtagaaattaggttgtgttctttgtgagctcttgtgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgctctc 21353607  T
Q  204 tcc 206  Q
    |||    
T  21353606 tcc 21353604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 2 - 236
Target Start/End: Complemental strand, 27453207 - 27452970
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctctt--aggattcat--tgagagtgtgggtga 97  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||| ||||| ||||| || |||||||  ||| |||||  |||||| ||||| ||    
T  27453207 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaa-gcttccttttgtgtcttctcttttagggttcatattgagagagtggg-ga 27453110  T
Q  98 cttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaattt-cttgtaacccctttgtatcactttgatcctaatggattggagag 195  Q
         ||| || |||||| || |  |||||||| ||| ||||||||||||| ||| |||||||||| |||||| |||||| ||| || ||||||||||||    
T  27453109 aacacaaatgggtagaaaataggaattgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagag 27453011  T
Q  196 ctgctatctcccccatagtaggtcatattggaccgaactgg 236  Q
    ||||| ||||||||  | |||||||||||||||||||||||    
T  27453010 ctgctctctcccccggattaggtcatattggaccgaactgg 27452970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 25929235 - 25929365
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttcttttt--gggttttctcttaggattcattgagagtgtgggtgact 99  Q
    ||||||||||||  ||| ||||||||||||||||| |||||||| |||||||||||||||  | ||||||||||||||||||||| |||||||||||||     
T  25929235 cattgtaaacact-tgggtagtgagatttcaccatcggaaggatcaaaaagcttctttttttgtgttttctcttaggattcattgtgagtgtgggtgaca 25929333  T
Q  100 tgaaaaaggatagaaattatgttttgttcttt 131  Q
    |||||| |  |||||| || || |||||||||    
T  25929334 tgaaaatgagtagaaactaggtcttgttcttt 25929365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 234
Target Start/End: Complemental strand, 32143570 - 32143335
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctctt--aggattcat--tgagagtgtgggtga 97  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||| ||||| | ||| || |||||||  ||| |||||  |||||| ||||| ||    
T  32143570 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaa-gcttcctcttgtgtcttctcttttagggttcatattgagagagtggg-ga 32143473  T
Q  98 cttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaattt-cttgtaacccctttgtatcactttgatcctaatggattggagag 195  Q
         ||| || |||||  || || |||||||| ||| ||||||||||||| ||| |||||||||| |||||| |||||| ||| || ||||||||||||    
T  32143472 aacacaaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagag 32143374  T
Q  196 ctgctatctcccccatagtaggtcatattggaccgaact 234  Q
    ||||| ||||||||| | |||||||||||||||||||||    
T  32143373 ctgctctctcccccagattaggtcatattggaccgaact 32143335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 47649817 - 47649658
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattc--attgagagtgtgggtgact 99  Q
    ||||||||||||| ||| |||| ||||||||||||| ||||||| |||||||||| ||||| |||||||||||||||||  |||| ||| |||||||||     
T  47649817 cattgtaaacaccttgggtagttagatttcaccatttgaaggatcaaaaagcttccttttgtgttttctcttaggattcatattgcgagagtgggtgac- 47649719  T
Q  100 tgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaac 159  Q
      |||| || ||||||||| || |||||||| ||  |||||| ||| ||||||||||||||    
T  47649718 acaaaatgggtagaaattaggtcttgttcttgtggaagcttgtaagttaatttcttgtaac 47649658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 188
Target Start/End: Original strand, 5366164 - 5366351
Alignment:
Q  4 ttgtaaacaccctggttagtgagatttcacca-ttggaaggataaaaaagcttctttttgggttttctcttaggattcattgag-agtgtgggtgacttg 101  Q
    ||||||||||| ||| |||| ||||||||  | ||||||||||  ||||| ||| ||| | |||||| ||||||||||||| |  ||||||||||||| |    
T  5366164 ttgtaaacaccttgggtagtaagatttcaataattggaaggatcgaaaagtttcctttagtgttttcgcttaggattcatttattagtgtgggtgactag 5366263  T
Q  102 aaaaa-ggatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggat 188  Q
    ||||| || ||||||||| | ||| ||| ||||||| ||  ||| ||||||||||||||| |||||||||||||| ||| || |||||    
T  5366264 aaaaaagggtagaaattaagattttttcattgtgagattttaagataatttcttgtaacctctttgtatcactttcatcatagtggat 5366351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 164 - 272
Target Start/End: Original strand, 27986449 - 27986562
Alignment:
Q  164 ttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggttacca---tattggtgtgtttgtt- 259  Q
    ||||| |||||| ||| || ||||||||||||||||| ||||||||| | ||||||||||||||||||||||||| | ||   | ||||||||||||||     
T  27986449 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgttc 27986548  T
Q  260 -ttctttcttgctt 272  Q
     |||||||||||||    
T  27986549 attctttcttgctt 27986562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 33386669 - 33386741
Alignment:
Q  164 ttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattggaccgaactgg 236  Q
    ||||| |||||| ||| || ||||||||||||||||| ||||||||| | |||||||||||||||||||||||    
T  33386669 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgg 33386741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 39032393 - 39032472
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcat 82  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||  ||||||||| ||||| || |||||||||| |||||    
T  39032393 cattgtaaacaccttgggtagtgagatttcaccattggaaggat-caaaagcttccttttgtgtcttctcttagggttcat 39032472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 6 - 188
Target Start/End: Complemental strand, 21156672 - 21156489
Alignment:
Q  6 gtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattga-gagtgtgggtgacttgaaa 104  Q
    ||||||||| | |||| ||||||||||  |||| || ||| |||||||||  ||| | |||||||||||||| ||||| | ||||||   |||||| |||    
T  21156672 gtaaacaccttagttaatgagatttcattattgaaaagatcaaaaagcttgctttagtgttttctcttaggaatcatttatgagtgtttatgacttaaaa 21156573  T
Q  105 aaggatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggat 188  Q
    | |||||||||| |  ||||||||||||||| |||  |||||||||| || ||| | |||||||||| ||| ||| || |||||    
T  21156572 atggatagaaataagattttgttctttgtgaacttttaagctaattttttttaatctctttgtatcagttttatcatagtggat 21156489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 38210569 - 38210623
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||    
T  38210569 tggattggagagctgctctctcccccatactaggtcagattggaccgaactgggt 38210623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 72 - 160
Target Start/End: Complemental strand, 25517159 - 25517070
Alignment:
Q  72 ttaggattcattgagagtgtgggtgacttgaaaaagga-tagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacc 160  Q
    ||||| |||| || |||||||||||||||||||||  | ||||||||| | ||||||||||||||||||  ||||||||||||| |||||    
T  25517159 ttagggttcactgtgagtgtgggtgacttgaaaaataagtagaaattagggtttgttctttgtgagcttttaagctaatttcttataacc 25517070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 40372766 - 40372870
Alignment:
Q  123 ttgttctt-tgtgagcttgcaagctaattt-cttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtca 220  Q
    |||||||| ||| ||||||||||||| ||| |||||||||| |||||| |||||| ||| || ||||||||||||||||| ||||||||| | |||| ||    
T  40372766 ttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccccagattaggcca 40372864  T
Q  221 tattgg 226  Q
    ||||||    
T  40372865 tattgg 40372870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 226
Target Start/End: Complemental strand, 1306197 - 1305970
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctctt--aggattcat--tgagagtgtgggtga 97  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||   || ||||| | ||| || |||||||  ||| |||||  |||||| ||||| ||    
T  1306197 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcttaa-gcttcctcttgtgtcttctcttttagggttcatattgagagagtggg-ga 1306100  T
Q  98 cttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaattt-cttgtaacccctttgtatcactttgatcctaatggattggagag 195  Q
         ||| || |||||| ||||  |||||||| ||| ||||||||| ||| ||| |||||||||| |||||| |||||| ||| || ||||||||||||    
T  1306099 aacacaaatgggtagaaactatgacttgttcttgtgtaagcttgcaaactatttttcttgtaaccc-tttgtaacactttcatcgtagtggattggagag 1306001  T
Q  196 ctgctatctcccccatagtaggtcatattgg 226  Q
    ||||||||||||| | | |||| ||||||||    
T  1306000 ctgctatctcccctagattaggccatattgg 1305970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 135 - 284
Target Start/End: Complemental strand, 8477476 - 8477325
Alignment:
Q  135 agcttgcaagctaat--ttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattggaccgaa 232  Q
    ||||||||||||| |  |||||||||||| |||||| |||||| ||| || ||||||||||||||||| ||||||||| | |||| |||||||| | |||    
T  8477476 agcttgcaagctattgtttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaa 8477379  T
Q  233 ctgggttacca----tattggtgtgtttgttttctttcttgctttcttatcttgtt 284  Q
    |||||| | ||    | ||||||||||||  ||||||||| ||| |||||||||||    
T  8477378 ctgggtcaacaatcttcttggtgtgtttg--ttctttctttcttgcttatcttgtt 8477325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 26928561 - 26928666
Alignment:
Q  123 ttgttctt-tgtgagcttgcaagctaattt--cttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtc 219  Q
    |||||||| ||| ||||||||||||| |||  |||||||||| |||||| |||||| ||| || |||||||||||| |||| ||||||||| | ||||||    
T  26928561 ttgttcttgtgtaagcttgcaagctattttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagttgctctctcccccagattaggtc 26928659  T
Q  220 atattgg 226  Q
    |||||||    
T  26928660 atattgg 26928666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 27986295 - 27986365
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctctt 73  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||  ||||||||| ||||| || |||||||    
T  27986295 cattgtaaacaccttgggtagtgagatttcaccattggaaggat-caaaagcttccttttgtgtcttctctt 27986365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 33386514 - 33386584
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctctt 73  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||  ||||||||| ||||| || |||||||    
T  33386514 cattgtaaacaccttgggtagtgagatttcaccattggaaggat-caaaagcttccttttgtgtcttctctt 33386584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 32891116 - 32891193
Alignment:
Q  101 gaaaaaggatagaaattatgttttgttctttgtgagcttg--caagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||| || ||||||||| |||||||||||||||||||||   |||||||||||||||||| | |||||||| |||||    
T  32891116 gaaaatgggtagaaattaagttttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttg 32891193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 2671585 - 2671661
Alignment:
Q  149 tttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattgg 226  Q
    ||||||||||||| |||||| |||||| ||| || ||||||||||||||||| ||||||||| | |||| ||||||||    
T  2671585 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattgg 2671661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 226
Target Start/End: Complemental strand, 7167342 - 7167266
Alignment:
Q  149 tttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattgg 226  Q
    ||||||||||||| |||||| |||||| ||| || ||||||||||||||||| ||||||||| | |||| ||||||||    
T  7167342 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattgg 7167266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 8739062 - 8739138
Alignment:
Q  149 tttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattgg 226  Q
    ||||||||||||| |||||| |||||| ||| || ||||||||||||||||| ||||||||| | |||| ||||||||    
T  8739062 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattgg 8739138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 9091300 - 9091376
Alignment:
Q  149 tttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattgg 226  Q
    ||||||||||||| |||||| |||||| ||| || ||||||||||||||||| ||||||||| | |||| ||||||||    
T  9091300 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattgg 9091376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 6063504 - 6063450
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||||||| |||||| ||||||||| | ||||||| |||||||||||||||||    
T  6063504 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggt 6063450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 22835157 - 22835081
Alignment:
Q  101 gaaaaaggatagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||| || ||||||||| |||| ||||||||||||||||   |||||||||||||||||||| |||||||| |||||    
T  22835157 gaaaatgggtagaaattaggttt-gttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatccctttg 22835081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 29196542 - 29196465
Alignment:
Q  101 gaaaaaggatagaaattatgttttgttctttgtgagcttg--caagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||| || ||||||||| | |||||||||||||||||||   |||||||||||||| ||||| |||||||| |||||    
T  29196542 gaaaatgggtagaaattagggtttgttctttgtgagcttgtcaaagctaatttcttggaacccatttgtatctctttg 29196465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 29682372 - 29682448
Alignment:
Q  101 gaaaaaggatagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||| || |||||||||||||| ||||||||||||||||   ||||||||||||||| |||| |||||||| |||||    
T  29682372 gaaaatgggtagaaattatgttt-gttctttgtgagcttgtttaagctaatttcttgtcacccatttgtatccctttg 29682448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 46860487 - 46860563
Alignment:
Q  101 gaaaaaggatagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||| || ||||||||| |||| ||||||||||||||||   |||||||||||||||||||| |||||||| |||||    
T  46860487 gaaaatgggtagaaattaggttt-gttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttg 46860563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 50494198 - 50494252
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||||||| |||||| ||||||||| | ||||||| |||||||||||||||||    
T  50494198 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggt 50494252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 5434023 - 5433955
Alignment:
Q  110 tagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||| | |||||||||||||||||||   |||||||||||||||||||| ||| |||| |||||    
T  5434023 tagaaattagggtttgttctttgtgagcttgttaaagctaatttcttgtaacccttttatatctctttg 5433955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 122 - 176
Target Start/End: Complemental strand, 23392044 - 23391988
Alignment:
Q  122 tttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    |||||||||||||||||||   ||| |||||||||||||||| ||||||||||||||    
T  23392044 tttgttctttgtgagcttgtttaagataatttcttgtaacccatttgtatcactttg 23391988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 122 - 176
Target Start/End: Complemental strand, 32744571 - 32744515
Alignment:
Q  122 tttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    |||||||||||||||||||   |||||||||||||||||| | ||||||||||||||    
T  32744571 tttgttctttgtgagcttgtttaagctaatttcttgtaactcatttgtatcactttg 32744515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 46173391 - 46173446
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||||||||   |||||||||||||||||||| |||||||| |||||    
T  46173391 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttg 46173446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 760882 - 760936
Alignment:
Q  124 tgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    |||||||||||||||||   |||||||||||||||||||| |||||||| |||||    
T  760882 tgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatccctttg 760936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 45
Target Start/End: Original strand, 26928438 - 26928481
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggat 45  Q
    ||||||||||||| ||| || |||||||||||||||||||||||    
T  26928438 cattgtaaacaccttgggtaatgagatttcaccattggaaggat 26928481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 164 - 317
Target Start/End: Original strand, 39039995 - 39040151
Alignment:
Q  164 ttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggttacca---tattggtgtgtttgttt 260  Q
    ||||| |||||| ||| || |||||||||||| || | ||| ||||| | ||||||||||||||||||||| ||| | ||   | |||||||||||| ||    
T  39039995 ttgtaacactttcatcatagtggattggagagttgttctcttccccagattaggtcatattggaccgaactaggtcaacaatcttttggtgtgtttg-tt 39040093  T
Q  261 tctttcttgc-tttcttatcttgttgttttgattatgtttgtggtgatgctttacact 317  Q
     ||||||| | || ||||||||  || |||| ||||| |||||||| |||| ||||||    
T  39040094 cctttctttcattgcttatctttgtgctttgtttatgcttgtggtgttgctctacact 39040151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 458483 - 458537
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||||||| |||||| ||||||||| | |||||||  ||||||||||||||||    
T  458483 tggattggagggctgctctctcccccagactaggtcaggttggaccgaactgggt 458537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 4103954 - 4103900
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||||| |||| |||||||||||||||| | |||||||  ||||||||||||||||    
T  4103954 tggatcggagggctgctatctcccccagactaggtcaatttggaccgaactgggt 4103900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 160
Target Start/End: Original strand, 6716514 - 6716572
Alignment:
Q  103 aaaaggatagaaattatgttttgttctttgtgagcttg-caagctaatttcttgtaacc 160  Q
    |||||| ||||||||| | ||||||| |||||| |||| ||||||||||||||||||||    
T  6716514 aaaagggtagaaattagggtttgttcattgtgaacttgtcaagctaatttcttgtaacc 6716572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 10621588 - 10621534
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||||||| |||||| ||||||||| | ||| ||| |||||||||||||||||    
T  10621588 tggattggagggctgctctctcccccagactagctcagattggaccgaactgggt 10621534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 23410484 - 23410408
Alignment:
Q  101 gaaaaaggatagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||| || ||||||||||||||  |||||||||||||||   ||||||||||| | |||||| ||||||||||||||    
T  23410484 gaaaatgggtagaaattatgttta-ttctttgtgagcttgtttaagctaatttcgtataacccatttgtatcactttg 23410408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 37408471 - 37408547
Alignment:
Q  101 gaaaaaggatagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    |||||||| ||||||||| | || ||||||||||| ||||   |||||||||||||||||||| |||||||| |||||    
T  37408471 gaaaaagggtagaaattagggtt-gttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttg 37408547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 53894115 - 53894061
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||||||| |||||| ||||||||| | |||||||  ||||||||||||||||    
T  53894115 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggt 53894061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 160
Target Start/End: Original strand, 54635139 - 54635197
Alignment:
Q  103 aaaaggatagaaattatgttttgttctttgtgagcttg-caagctaatttcttgtaacc 160  Q
    |||||| ||||||||| | ||||||| |||||| |||| ||||||||||||||||||||    
T  54635139 aaaagggtagaaattagggtttgttcattgtgaacttgtcaagctaatttcttgtaacc 54635197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 5258298 - 5258223
Alignment:
Q  102 aaaaaggatagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||| ||||||||| | || ||||||||||| ||||   |||||||||||||||||||| |||||||| |||||    
T  5258298 aaaaagggtagaaattagggtt-gttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttg 5258223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 5260477 - 5260402
Alignment:
Q  102 aaaaaggatagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||| ||||||||| | || ||||||||||| ||||   |||||||||||||||||||| |||||||| |||||    
T  5260477 aaaaagggtagaaattagggtt-gttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttg 5260402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 176
Target Start/End: Original strand, 9581315 - 9581371
Alignment:
Q  122 tttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    |||||||||||||||||||   ||||||||||||| |||||| |||||||| |||||    
T  9581315 tttgttctttgtgagcttgtttaagctaatttcttttaacccatttgtatccctttg 9581371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 10595089 - 10595040
Alignment:
Q  190 ggagagctgctatctcccccatagtaggtcat-attggaccgaactgggt 238  Q
    ||||||||||| ||||||||||| |||||||| ||| |||||||||||||    
T  10595089 ggagagctgctctctcccccatactaggtcatcattagaccgaactgggt 10595040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 5236590 - 5236535
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||| ||||   |||||||||||||||||||| |||||||| |||||    
T  5236590 ttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttg 5236535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 173
Target Start/End: Complemental strand, 5797294 - 5797215
Alignment:
Q  94 gtgacttgaaaaa-ggatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcact 173  Q
    ||||||||||||| ||| ||||||||   |||||| |||||||| ||| || |||||||||||||||| | ||||||||||    
T  5797294 gtgacttgaaaaatggaaagaaattagagtttgttatttgtgagtttggaatctaatttcttgtaacctc-ttgtatcact 5797215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 9666613 - 9666562
Alignment:
Q  110 tagaaattatgttttgttctttgtgagcttg--caagctaatttcttgtaac 159  Q
    |||||||||  ||||||||||||||||||||   ||||||||||||||||||    
T  9666613 tagaaattagattttgttctttgtgagcttgttgaagctaatttcttgtaac 9666562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 19684023 - 19683968
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||| ||||   |||||||||||||||||||| |||||||| |||||    
T  19684023 ttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttg 19683968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 232
Target Start/End: Complemental strand, 28413090 - 28413042
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaa 232  Q
    |||||||||| |||||| ||||||||| | ||||||| |||||||||||    
T  28413090 tggattggagggctgctctctcccccagactaggtcagattggaccgaa 28413042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 29810902 - 29810957
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||| ||||   |||||||||||||||||||| |||||||| |||||    
T  29810902 ttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttg 29810957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 30236159 - 30236214
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||||||||   |||||||||||||||||||  |||||||| |||||    
T  30236159 ttgttctttgtgagcttgttgaagctaatttcttgtaacctatttgtatctctttg 30236214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 34491246 - 34491301
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||||||||   |||||||||||||||||| | |||||||| |||||    
T  34491246 ttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttg 34491301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 37725922 - 37725874
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaa 50  Q
    |||| |||||||| ||| ||||||||||||||||||| |||||| ||||    
T  37725922 cattataaacaccttggatagtgagatttcaccattgaaaggatcaaaa 37725874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 45095197 - 45095252
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||| ||||   |||||||||||||||||||| |||||||| |||||    
T  45095197 ttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttg 45095252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 53917716 - 53917668
Alignment:
Q  190 ggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||| |||||| ||||||||| | ||||||| |||||||||||||||||    
T  53917716 ggagggctgctctctcccccagactaggtcagattggaccgaactgggt 53917668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 54593738 - 54593793
Alignment:
Q  123 ttgttctttgtgagcttg--caagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||||||||   |||||||||| ||||||||| |||||||| |||||    
T  54593738 ttgttctttgtgagcttgttgaagctaatttattgtaacccatttgtatctctttg 54593793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 126; Significance: 7e-65; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 3 - 325
Target Start/End: Complemental strand, 23778 - 23450
Alignment:
Q  3 attgtaaacaccctggttagtgagatttcaccattggaaggataaaaaag-cttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    ||||||| |||| ||| ||||||||| |||||||| |||||||||||||| | || ||||| ||||||||||||||||||||| |||||||  |||| ||    
T  23778 attgtaatcaccttgggtagtgagatgtcaccattagaaggataaaaaaggcatcattttgtgttttctcttaggattcattgtgagtgtgtctgacatg 23679  T
Q  102 aaaaaggatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaa----cccctttgtatcactttgatcctaatggattggagagct 197  Q
    |||| || |||||||||  | ||||| |||||||||||  |||  ||||||||||||    ||  ||||||||||||| ||| || || |||||| ||||    
T  23678 aaaatgggtagaaattagatcttgttttttgtgagcttctaagaaaatttcttgtaattaacctatttgtatcactttcatcttagtgaattggatagct 23579  T
Q  198 gctatctcccccatagtaggtcatattggaccgaactgggttaccatattggtgtgtttgttttctttcttgctttcttatcttgttgttttgat--tat 295  Q
     || ||||||| | ||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||| ||| ||  |||    
T  23578 tctttctcccctaaagtaggtcatattggaccgaactaggttaccatcttggt-tgtttgttttctttcttgctttcttatcttgttgctttaattatat 23480  T
Q  296 gtttgtggtgatgctttacacttagattta 325  Q
    | |||||||| |||||||||||||| ||||    
T  23479 gcttgtggtgttgctttacacttagtttta 23450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 247 - 316
Target Start/End: Complemental strand, 43264 - 43195
Alignment:
Q  247 tggtgtgtttgttttctttcttgctttcttatcttgttgttttgattatgtttgtggtgatgctttacac 316  Q
    |||||| ||||| ||||||||| |||| ||||||||||| |||||||||| |||||||| ||||||||||    
T  43264 tggtgtatttgtcttctttcttacttttttatcttgttgctttgattatgcttgtggtgttgctttacac 43195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 120; Significance: 3e-61; HSPs: 68)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 2 - 291
Target Start/End: Complemental strand, 3051367 - 3051071
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    ||||||||||| | ||| |||||||||||||||||||||| ||| |||||||||| ||||| | ||||||||||||||||||||||||||  ||||| ||    
T  3051367 cattgtaaacatcttgggtagtgagatttcaccattggaaagatcaaaaagcttccttttgtgctttctcttaggattcattgagagtgtaagtgacatg 3051268  T
Q  102 aaaaa-ggatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgct 200  Q
    ||||| || ||||||||| |||||||||||||||||||   | |||||||||||||||| | ||||||||||||| ||| || |||||||||||| ||||    
T  3051267 aaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatcttagtggattggagaggtgct 3051168  T
Q  201 atctcccccatagtaggtcatattggaccgaactgggttacca--tattggtgtgt---ttgttttctttcttgctttcttat-cttgttgttttga 291  Q
     ||||| ||| || |||| ||||| ||||||| |||||||| |    |||||||||   |||||||||||||||||||||||| ||||| |||||||    
T  3051167 ctctcctccagaggaggttatattagaccgaattgggttactaatctttggtgtgtttgttgttttctttcttgctttcttatgcttgtggttttga 3051071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 2 - 342
Target Start/End: Complemental strand, 28307809 - 28307466
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    |||||| |||||| ||| |||||||||||||| |||||||||||||||||||||  ||||| ||||||| |||||||||| |||||||||||||||||||    
T  28307809 cattgttaacaccttgggtagtgagatttcacaattggaaggataaaaaagctttcttttgtgttttcttttaggattcagtgagagtgtgggtgacttg 28307710  T
Q  102 a-aaaaggatagaaattatgttttgttctttgtgagc-ttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgc 199  Q
    | ||| |  |||||| || || ||||||||| ||||| ||  || ||||||||||||||||| | ||||| ||||  ||| || ||||||||||||||||    
T  28307709 agaaatgtgtagaaagtaggtcttgttctttatgagcttttaaaactaatttcttgtaacccatgtgtattacttccatcttagtggattggagagctgc 28307610  T
Q  200 tatctcccccatagtaggtcatattggaccgaactgggttacc-atattggtgtgtttgttttctttcttgctttcttat-cttgttgttttgattatgt 297  Q
    | ||  ||||| |||||||||| |||||||||||||||||||| || |||| ||||||  |||| |||||||||||||||  || ||| |||| |||||     
T  28307609 tctcatccccagagtaggtcattttggaccgaactgggttaccaatcttggcgtgttt-atttcattcttgctttcttatatttattgctttgtttatgc 28307511  T
Q  298 ttgtggtgatgctttacacttagatttaagtcagtttgttgttgt 342  Q
    |||||||| || | |||||||||||||| ||   |||||||||||    
T  28307510 ttgtggtgctgttatacacttagatttaggtttatttgttgttgt 28307466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 3 - 348
Target Start/End: Original strand, 19752245 - 19752594
Alignment:
Q  3 attgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttga 102  Q
    |||||||||||| ||| ||||||||||||| |||||||||||| |||||||||| ||| | ||||||||||||||||||||||||||||||||||  |||    
T  19752245 attgtaaacaccttgggtagtgagatttcatcattggaaggatcaaaaagcttccttt-gtgttttctcttaggattcattgagagtgtgggtgatatga 19752343  T
Q  103 aaaa-ggatagaaattatgttttgttctt-tgtgagcttgcaagctaattt-cttgtaacccctttgtatcactttgatcctaatggattggagagctgc 199  Q
    |||| || ||||||||| |  |||||||| ||| ||||||||||||| ||| |||||||| | || ||| |||||| ||| || ||||||||||||||||    
T  19752344 aaaatgggtagaaattaggacttgttcttgtgtaagcttgcaagctatttttcttgtaactcatt-gtaacactttcatcttagtggattggagagctgc 19752442  T
Q  200 tatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatct-tgttgttttgattatg 296  Q
    | ||||||| | | ||||||||||||||||||||| |||  || || |||||||||||| || || |||| | || ||||||| | ||| ||||||||||    
T  19752443 tctctcccctagactaggtcatattggaccgaactaggtcaacaatcttggtgtgtttg-ttcctctctttcattacttatctctattgctttgattatg 19752541  T
Q  297 tttgtggtgatgctttacacttagatttaagtcag-tttgttgttgttgcttg 348  Q
     |||||||| |||  |||||||||||||| ||| | |||||||||||||||||    
T  19752542 cttgtggtgttgcactacacttagatttaggtctgttttgttgttgttgcttg 19752594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 3 - 346
Target Start/End: Original strand, 5702331 - 5702682
Alignment:
Q  3 attgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggtttt-ctcttaggattcatt---gagagtgtgggtgac 98  Q
    |||||||||||| ||| |||||||||||||||||||||| ||| |||||||||| ||||| ||||| |||||||||||||||   |||||||||||||||    
T  5702331 attgtaaacaccttgggtagtgagatttcaccattggaatgatcaaaaagcttccttttgtgtttttctcttaggattcattattgagagtgtgggtgac 5702430  T
Q  99 ttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagct 197  Q
    |  |||| || ||||||||| |||||| |||| ||| |||||  |||||||||||||||||| | |||||| |||||| ||| ||  ||||||||| | |    
T  5702431 tc-aaaatgggtagaaattaggttttgctcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcataggggattggagggat 5702529  T
Q  198 gctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgctttcttatct-tgttgttttgattat 295  Q
    ||| ||||||||||| |||||||||||||||||||||||||  || || ||||||||||||||   || |||  |  ||||||| | ||| ||| |||||    
T  5702530 gctctctcccccatattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctttccttcatagcttatctctattgctttaattat 5702629  T
Q  296 gtttgtggtgatgctttacacttagatttaagtcag--tttgttgttgttgct 346  Q
    | ||||||||||||| ||||||||||| || ||| |  |||||||||||||||    
T  5702630 gcttgtggtgatgctctacacttagatctaggtctgtttttgttgttgttgct 5702682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 2 - 343
Target Start/End: Original strand, 26403079 - 26403423
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcat--tgagagtgtgggtgact 99  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||||||||| ||||| ||||||||||| |||||||  || ||| ||| |||||     
T  26403079 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttatgattcatattgtgagagtgagtgaca 26403178  T
Q  100 tgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctg 198  Q
      |||| || ||||||||| || |||||||| ||  |||||| ||||||||||| | |||| | |||||| |||||| ||| || |||||||||||||||    
T  26403179 c-aaaatgggtagaaattaggtcttgttcttgtgcaagcttgtaagctaatttcctataactcttttgtaacactttcatcatagtggattggagagctg 26403277  T
Q  199 ctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgtt-ttctttcttgctttcttatc-ttgttgttttgattat 295  Q
    || ||||||||| | |||||||||||||||||||||||||  || || ||||||||||||||  || || ||  || |||||| || ||| |||||||||    
T  26403278 ctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctcgtt-ttcattgcttatctttattgctttgattat 26403376  T
Q  296 gtttgtggtgatgctttacacttagatttaagtcagtttgttgttgtt 343  Q
    | |||||||| |||| |||||||||||||| ||| |||| ||||||||    
T  26403377 gcttgtggtgttgctctacacttagatttaggtctgttt-ttgttgtt 26403423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 2 - 344
Target Start/End: Original strand, 23799426 - 23799772
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcat--tgagagtgtgggtgact 99  Q
    ||||||||||||| ||  ||| |||||||||||||||||||||| |||||||||| ||||| |||||| ||||||||||||  || ||  |||||||||     
T  23799426 cattgtaaacaccttgagtagggagatttcaccattggaaggatcaaaaagcttccttttgtgttttcccttaggattcatattgtgacagtgggtgaca 23799525  T
Q  100 tgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctg 198  Q
      |||| || ||||||||| || |||||||| ||| |||||| |||||||||||||||||| | |||||| |||||| ||| || |||||||||| ||||    
T  23799526 c-aaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctg 23799624  T
Q  199 ctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatct-tgttgttttgattat 295  Q
    || ||||| ||| | |||||||||||||||||||||||||  || || |||||||||||| || ||||||| | || ||||||| | ||| |||||||||    
T  23799625 ctctctcctccaaattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttg-ttcctttctttcattgcttatctctattgctttgattat 23799723  T
Q  296 gtttgtggtgatgctttacacttagatttaagtcagtttgttgttgttg 344  Q
    |||||||||  | || ||||||||||| || |||  ||| |||||||||    
T  23799724 gtttgtggtacttctctacacttagatctaggtctattttttgttgttg 23799772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 2 - 349
Target Start/End: Original strand, 5990411 - 5990761
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    |||||||| || | ||||| |||||||||||||||| ||| | | |||||||||  ||| | |||||||||||||||||||||| |||||||||||||||    
T  5990411 cattgtaatcatcttggtttgtgagatttcaccattcgaaaggtcaaaaagctttctttagtgttttctcttaggattcattgaaagtgtgggtgacttg 5990510  T
Q  102 aaaaa-ggatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgct 200  Q
    ||||| || |  |||| | ||  ||||||||||||||||  ||||||||||||||||||  |||||||||||||| ||| || |  |||||||||| |||    
T  5990511 aaaaatgggtgaaaatgaggtcgtgttctttgtgagcttttaagctaatttcttgtaacatctttgtatcactttcatcttagt-aattggagagccgct 5990609  T
Q  201 atctcccccatagtaggtcatattggaccgaactgggttacc-atattggtgtgtttg-ttttctttcttgctttcttatc-ttgttg-ttttgattatg 296  Q
     ||||||||| | || ||||||||||||| ||||  |||||| || ||| |||| ||| ||||| ||||||||| |||||| |||||| |||||| ||||    
T  5990610 ctctcccccacaatatgtcatattggaccaaact-tgttaccaatcttgttgtgcttgtttttcattcttgcttgcttatctttgttgcttttgaatatg 5990708  T
Q  297 tttgtggtgatgctttacacttagatttaagtcagtttgttgttgttgcttga 349  Q
     |||||||  || | |||||||||||||| |||  ||||||||||||||||||    
T  5990709 cttgtggttttgttctacacttagatttaggtctatttgttgttgttgcttga 5990761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 2 - 348
Target Start/End: Original strand, 4696458 - 4696797
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||| |||||||||| ||||| |||||||||||||||||| ||||||||||||||||       
T  4696458 cattgtaaacaccttgggtagtgagatttcaccattggaaagatcaaaaagcttccttttgtgttttctcttaggattcaatgagagtgtgggtgac-ac 4696556  T
Q  102 aaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgct 200  Q
    |||| || ||||||||| || ||||||||  || |||||  |||||||||||||||||           | |||| ||| || |||||||||| ||||||    
T  4696557 aaaatgggtagaaattaggtcttgttcttgcgtaagcttataagctaatttcttgtaa-----------ctctttcatcatagtggattggagggctgct 4696645  T
Q  201 atctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgattatgt 297  Q
     ||||||||| | |||||||||||||| ||||||||||  || || |||||||||||| ||  |||||| | || |||||| || ||| |||||||||||    
T  4696646 ctctcccccagattaggtcatattggatcgaactgggtcaacaatcttggtgtgtttg-ttcatttctttcattgcttatctttattgctttgattatgt 4696744  T
Q  298 ttgtggtgatgctttacacttagatttaagtcag--tttgttgttgttgcttg 348  Q
    |||||||| |||| |||||||||||||| ||| |  |||||||||||||||||    
T  4696745 ttgtggtgttgctctacacttagatttatgtctgtttttgttgttgttgcttg 4696797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 2 - 235
Target Start/End: Complemental strand, 6127470 - 6127234
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcatt---gagagtgtgggtgac 98  Q
    |||||||||||   ||| |||||||||||||||||||||||||| |||||||||  ||||| ||||||||||||||||||||   |||||||||||||||    
T  6127470 cattgtaaacattttgggtagtgagatttcaccattggaaggatcaaaaagctttcttttgtgttttctcttaggattcattattgagagtgtgggtgac 6127371  T
Q  99 ttgaaaaaggatagaaattatgttttgttcttt-gtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagct 197  Q
       |||| || ||||||||| || ||||||||| || |||||  |||||||||||||||||| | |||||| |||||| ||| || ||||||||||||||    
T  6127370 ac-aaaatgggtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagct 6127272  T
Q  198 gctatctcccccatagtaggtcatattggaccgaactg 235  Q
    ||| ||| ||||| | ||||||||||||||||||||||    
T  6127271 gctctcttccccaaattaggtcatattggaccgaactg 6127234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 64 - 233
Target Start/End: Original strand, 9054749 - 9054919
Alignment:
Q  64 gttttctcttaggattcattgagagtgtgggtgacttgaaaaa-ggatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccc 162  Q
    ||||||||||||||||||||||||||||| ||||||||||||| || |||||||||  |||||||||||||| ||||  ||||||||||||||||||| |    
T  9054749 gttttctcttaggattcattgagagtgtgagtgacttgaaaaatgggtagaaattagattttgttctttgtgcgcttttaagctaatttcttgtaaccac 9054848  T
Q  163 tttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattggaccgaac 233  Q
    ||||||||||||| ||| || |||||| |||||||||| ||||| ||| ||||||||||||||||| ||||    
T  9054849 tttgtatcactttcatcttagtggattagagagctgctctctcctccagagtaggtcatattggactgaac 9054919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 88 - 344
Target Start/End: Complemental strand, 6813845 - 6813583
Alignment:
Q  88 gtgtgggtgacttgaaaaa-ggatagaaa-ttatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatg 185  Q
    ||||| ||||||||||||| || |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| || ||    
T  6813845 gtgtgagtgacttgaaaaatgggtagaaaattaggttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtgtcactttcatcttattg 6813746  T
Q  186 gattggagagctgctatctcccccatagtaggtcatattggaccgaactgggttacca--tattggtgtgtttgttttctttcttgc-tttcttatc-tt 281  Q
    ||||||||||||||| ||||||| |  |||||| ||||||||||||||||||||| ||    ||||| |||||| || ||||||| | ||||||||| ||    
T  6813745 gattggagagctgctctctcccctagtgtaggttatattggaccgaactgggttaacaatctttggtatgtttg-ttcctttctttcatttcttatcttt 6813647  T
Q  282 gttgttttgattatgtttgtggtgatgctttacacttagatttaagtc-agtttgttgttgttg 344  Q
     ||| |||||||||| ||||| || || | |||||| ||| ||||||| | |||||||||||||    
T  6813646 attgctttgattatgcttgtgatgttgttctacactaagacttaagtctattttgttgttgttg 6813583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 2 - 190
Target Start/End: Original strand, 7493023 - 7493212
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttg 101  Q
    ||||||||||||| ||| |||||||||||||| ||| ||||||| |||||||||| ||| | ||||| |||||||||| |||||||||||||||||||||    
T  7493023 cattgtaaacaccttgggtagtgagatttcacaattagaaggatcaaaaagcttcctttagtgttttttcttaggatttattgagagtgtgggtgacttg 7493122  T
Q  102 aaaaa-ggatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattg 190  Q
    |||||  | ||||||||| |||||||||| |||||||||  | | ||||||||| ||||  |||||||||||||| ||| || |||||||    
T  7493123 aaaaacaggtagaaattaggttttgttctgtgtgagcttttatgttaatttcttataacttctttgtatcactttcatcttagtggattg 7493212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 2 - 238
Target Start/End: Complemental strand, 7412587 - 7412351
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcatt---gagagtgtgggtgac 98  Q
    ||||||||||||| ||| ||||||||||||||||||| |||||| |||| ||||| ||||  || |||||||||| ||||||   ||||| |||||  ||    
T  7412587 cattgtaaacaccttgggtagtgagatttcaccattgaaaggatcaaaa-gcttccttttatgtcttctcttagggttcattattgagagagtgggaaac 7412489  T
Q  99 ttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagct 197  Q
        ||| || ||||||||| || |||||||| ||| |||||||||| || ||||||||||| | |||||| |||||| ||| || ||||||||||||||    
T  7412488 ac--aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagttattttcttgtaactc-tttgtaacactttcatcatagtggattggagagct 7412392  T
Q  198 gctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||| ||||||||||| |||||||||||||||||||||||||    
T  7412391 gctctctcccccatattaggtcatattggaccgaactgggt 7412351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 2 - 238
Target Start/End: Complemental strand, 4456275 - 4456038
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctctt-aggattcat---tgagagtgtgggtga 97  Q
    ||||||||||||| ||| |||||||||||||||||| ||||||| |||| ||||| ||||| || ||||||| ||| |||||   |||||| |||||| |    
T  4456275 cattgtaaacaccttgggtagtgagatttcaccattagaaggatcaaaa-gcttccttttgtgtcttctctttagggttcatcattgagagagtgggtaa 4456177  T
Q  98 cttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagc 196  Q
    |    ||| || |||||||||||| |||||||| ||| ||||||| ||||| ||||||||||| | |||||| |||||| ||| || |||||||||||||    
T  4456176 cac--aaatgggtagaaattatgtcttgttcttgtgtaagcttgccagctattttcttgtaactc-tttgtaacactttcatcatagtggattggagagc 4456080  T
Q  197 tgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||| ||||||||| | |||| ||||||||||||||| ||||    
T  4456079 tgctctctcccccagattaggccatattggaccgaaccgggt 4456038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 184 - 348
Target Start/End: Original strand, 9765852 - 9766021
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggttacca--tattggtgtgtttgttttctttcttgctttcttatc-t 280  Q
    ||||||||||||||||| ||||||||| | ||||||||||||||||||||||||| | ||   |||||||||||||||  |||  ||  || |||||| |    
T  9765852 tggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcattggtgtgtttgttcccttctttcattgcttatctt 9765951  T
Q  281 tgttgttttgattatgtttgtggtgatgctttacacttagatttaagtcag--tttgttgttgttgcttg 348  Q
    | ||| |||||||||| |||||||| |||| |||||||||||||| ||  |  |||||||||||||||||    
T  9765952 tattgctttgattatgcttgtggtgttgctctacacttagatttaggtttgtttttgttgttgttgcttg 9766021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 31071200 - 31071312
Alignment:
Q  123 ttgttctt-tgtgagcttgcaagctaattt-cttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtca 220  Q
    |||||||| ||| ||||||||||||| ||| |||||||||| |||||| |||||| ||| || ||||||||||||||||| ||||||||| | |||||||    
T  31071200 ttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtca 31071298  T
Q  221 tattggaccgaact 234  Q
    ||||||||||||||    
T  31071299 tattggaccgaact 31071312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 234
Target Start/End: Original strand, 19175604 - 19175837
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcat---tgagagtgtgggtgac 98  Q
    ||||||||||||| ||| |||||||||||||| ||||||||||| |||| | ||| ||||| || |||||||||| |||||   |||||| |||||  ||    
T  19175604 cattgtaaacaccttgggtagtgagatttcactattggaaggatcaaaa-gtttccttttgtgtcttctcttagggttcatcattgagagagtgggaaac 19175702  T
Q  99 ttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaattt-cttgtaacccctttgtatcactttgatcctaatggattggagagc 196  Q
        ||| |  ||||| ||| || |||||||| ||| |||||||| |||| ||| |||||||| | |||||| |||||| ||| || ||||||||||||     
T  19175703 ac--aaatgtgtagaagttaggtcttgttcttgtgtaagcttgcaggctatttttcttgtaactc-tttgtaacactttcatcatagtggattggagagt 19175799  T
Q  197 tgctatctcccccatagtaggtcatattggaccgaact 234  Q
    |||| ||||||||| | |||||||||||||||||||||    
T  19175800 tgctctctcccccagattaggtcatattggaccgaact 19175837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 1261938 - 1262029
Alignment:
Q  135 agcttgcaagctaattt-cttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattgg 226  Q
    ||||||||||||| ||| |||||||||| |||||| |||||| ||| || ||||||||||||||||| ||||||||| | |||||||||||||    
T  1261938 agcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattgg 1262029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 1822305 - 1822375
Alignment:
Q  102 aaaaaggatagaaattatgttttgttctttgtgagcttg--caagctaatttcttgtaacccctttgtatc 170  Q
    ||||||||||||||||||| |||||||||||||||||||   |||||||||||||||||||| ||| ||||    
T  1822305 aaaaaggatagaaattatggtttgttctttgtgagcttgttgaagctaatttcttgtaacccttttatatc 1822375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 1856750 - 1856820
Alignment:
Q  102 aaaaaggatagaaattatgttttgttctttgtgagcttg--caagctaatttcttgtaacccctttgtatc 170  Q
    ||||||||||||||||||| |||||||||||||||||||   |||||||||||||||||||| ||| ||||    
T  1856750 aaaaaggatagaaattatggtttgttctttgtgagcttgttgaagctaatttcttgtaacccttttatatc 1856820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 13204634 - 13204737
Alignment:
Q  3 attgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttga 102  Q
    |||||||||||| ||| ||||||||||||||| |||| || || |||||||||  |||    ||||||| ||||||||||||||||||| ||||| ||||    
T  13204634 attgtaaacaccttgggtagtgagatttcaccgttgggagaatcaaaaagctttatttaatattttctcataggattcattgagagtgtaggtgaattga 13204733  T
Q  103 aaaa 106  Q
    ||||    
T  13204734 aaaa 13204737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 30291619 - 30291696
Alignment:
Q  101 gaaaaaggatagaaattatgttttgttctttgtgagcttg--caagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||| || ||||||||| |||||||||||||||||||||   |||||||||||||||||| | ||||||||||||||    
T  30291619 gaaaatgggtagaaattaggttttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatcactttg 30291696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 4760074 - 4760150
Alignment:
Q  149 tttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattgg 226  Q
    ||||||||||||| |||||| |||||| ||| || ||||||||||||||||| ||||||||||| |||| ||||||||    
T  4760074 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattgg 4760150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 135
Target Start/End: Original strand, 31513185 - 31513314
Alignment:
Q  4 ttgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttgaa 103  Q
    ||||||||||| ||  |||||||||||||  |  ||||||||||||||   |||||  | ||||||||||||||||||||| |||||||| ||||| |||    
T  31513185 ttgtaaacaccttgaatagtgagatttcattagaggaaggataaaaaaaaatcttta-gtgttttctcttaggattcattgtgagtgtggatgactcgaa 31513283  T
Q  104 aaaggatagaaattatgttttgttctttgtga 135  Q
    ||  | ||||||||| | ||||||||||||||    
T  31513284 aataggtagaaatta-ggtttgttctttgtga 31513314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 149 - 227
Target Start/End: Original strand, 18870560 - 18870638
Alignment:
Q  149 tttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattgga 227  Q
    ||||||||||||| |||||| |||||| ||  || ||||||||||||||||| ||||||||| | |||| |||||||||    
T  18870560 tttcttgtaacccttttgtaacactttcattatattggattggagagctgctctctcccccagattaggccatattgga 18870638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 18853166 - 18853243
Alignment:
Q  149 tttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattgg 226  Q
    ||||||||||||| |||||| |||||| ||  || ||||||||||||||||| ||||||||| | |||| ||||||||    
T  18853166 tttcttgtaacccttttgtaacactttcattatattggattggagagctgctctctcccccagattaggccatattgg 18853243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 226
Target Start/End: Complemental strand, 36979475 - 36979399
Alignment:
Q  149 tttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattgg 226  Q
    ||||||||||||| |||||| |||||| ||| || ||||||||||||||||| ||||||||| | |||| ||||||||    
T  36979475 tttcttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattgg 36979399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 64 - 173
Target Start/End: Original strand, 8863537 - 8863646
Alignment:
Q  64 gttttctcttaggattcattga-gagtgtgggtgacttgaaaaa-ggatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaaccc 161  Q
    ||||||||||  |||||||| | | ||||| ||||||||||||| || ||||||||| | ||||||||  ||||||||  ||| |||||||||||||||     
T  8863537 gttttctctttagattcatttatgtgtgtgagtgacttgaaaaatgggtagaaattaaggtttgttct--gtgagcttttaagttaatttcttgtaacct 8863634  T
Q  162 ctttgtatcact 173  Q
    ||||||||||||    
T  8863635 ctttgtatcact 8863646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 18141854 - 18141909
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||||||||   |||||||||||||||||||| ||||||||||||||    
T  18141854 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatcactttg 18141909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 26288139 - 26288096
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggat 45  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||    
T  26288139 cattgtaaacaccttgggtagtgagatttcaccattggaaggat 26288096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 26301396 - 26301353
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggat 45  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||    
T  26301396 cattgtaaacaccttgggtagtgagatttcaccattggaaggat 26301353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 26313390 - 26313347
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggat 45  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||    
T  26313390 cattgtaaacaccttgggtagtgagatttcaccattggaaggat 26313347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 45
Target Start/End: Original strand, 31071077 - 31071120
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggat 45  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||    
T  31071077 cattgtaaacaccttgggtagtgagatttcaccattggaaggat 31071120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 9054270 - 9054324
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttc 56  Q
    |||| ||| |||| ||| |||||||||||||||||||||||||| ||||||||||    
T  9054270 cattataatcaccttgggtagtgagatttcaccattggaaggatcaaaaagcttc 9054324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 234
Target Start/End: Complemental strand, 19491743 - 19491709
Alignment:
Q  200 tatctcccccatagtaggtcatattggaccgaact 234  Q
    |||||||||||||||||||||||||||||||||||    
T  19491743 tatctcccccatagtaggtcatattggaccgaact 19491709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 43079877 - 43079931
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||||||| |||||| ||||||||| | ||||||| |||||||||||||||||    
T  43079877 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggt 43079931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 43082248 - 43082302
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||||||| |||||| ||||||||| | ||||||| |||||||||||||||||    
T  43082248 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggt 43082302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 10689142 - 10689218
Alignment:
Q  149 tttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattgg 226  Q
    ||||||||||||| | |||| |||||| ||| || ||||||||||||||||| ||||||||| | |||| ||||||||    
T  10689142 tttcttgtaaccc-tctgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattgg 10689218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 226
Target Start/End: Complemental strand, 30655744 - 30655668
Alignment:
Q  149 tttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattgg 226  Q
    ||||||||||||| |||||| |||||| ||| || | ||||||||||||||| ||||||||| | |||| ||||||||    
T  30655744 tttcttgtaaccc-tttgtaacactttcatcatattagattggagagctgctctctcccccagattaggccatattgg 30655668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 110 - 159
Target Start/End: Original strand, 42093139 - 42093188
Alignment:
Q  110 tagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaac 159  Q
    ||||||||||| | ||||||||||||| ||| ||||||||||||||||||    
T  42093139 tagaaattatgatatgttctttgtgagtttgtaagctaatttcttgtaac 42093188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 9765779 - 9765834
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||||||||   |||||||||||||||||||| |||||||| |||||    
T  9765779 ttgttctttgtgagcttggcaaagctaatttcttgtaacccatttgtatctctttg 9765834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 11772065 - 11771997
Alignment:
Q  124 tgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattgga 192  Q
    |||||||||||| |||| || |||||||||| ||||| |||||||||||| | ||| || |||||||||    
T  11772065 tgttctttgtgaacttgtaaactaatttcttttaacctctttgtatcactcttatcatagtggattgga 11771997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 18655434 - 18655489
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||||||||   |||||||||||||||||||| |||||||| |||||    
T  18655434 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttg 18655489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 232
Target Start/End: Complemental strand, 24873241 - 24873193
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaa 232  Q
    |||||||||| |||||| ||||||||||| ||||||| |||||||||||    
T  24873241 tggattggagggctgctctctcccccatactaggtcagattggaccgaa 24873193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 27811312 - 27811367
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||||||||   |||||||||||||||||||| |||||||| |||||    
T  27811312 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttg 27811367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 30143374 - 30143429
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||||||||   |||||||||||||||||||| |||||||| |||||    
T  30143374 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttg 30143429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 173
Target Start/End: Original strand, 34477134 - 34477241
Alignment:
Q  64 gttttctcttaggattcattgagagtgtgggtgacttgaaaaa-ggatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccc 162  Q
    |||||||||| |||||||||| |  | || ||||||||||||| || | |||||||    |||||||||||||| ||| ||| ||||||||| ||||| |    
T  34477134 gttttctctttggattcattgtggatttgagtgacttgaaaaatgggtcgaaattag---ttgttctttgtgagtttgtaagttaatttcttttaacctc 34477230  T
Q  163 tttgtatcact 173  Q
    |||||||||||    
T  34477231 tttgtatcact 34477241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 42435125 - 42435070
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||||||||   |||||||||||||||||||| |||||||| |||||    
T  42435125 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttg 42435070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 45
Target Start/End: Original strand, 1261802 - 1261845
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggat 45  Q
    |||||||| |||| ||| ||||||||||||||||||||||||||    
T  1261802 cattgtaatcaccttgggtagtgagatttcaccattggaaggat 1261845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 1292618 - 1292542
Alignment:
Q  101 gaaaaaggatagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||| || ||||||||| |||| ||||||||||||||||   |||||||||||||||||| | |||||||| |||||    
T  1292618 gaaaatgggtagaaattaagttt-gttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttg 1292542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 18813156 - 18813206
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaact 234  Q
    |||||||||| |||||| ||||||||||| |||||||  ||||||||||||    
T  18813156 tggattggagggctgctctctcccccatattaggtcaatttggaccgaact 18813206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 19491854 - 19491778
Alignment:
Q  101 gaaaaaggatagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||| || ||||||||| |||| ||||||||||||||||   || ||||||||||||||||| |||||||| |||||    
T  19491854 gaaaatgggtagaaattaggttt-gttctttgtgagcttgttgaaactaatttcttgtaacccatttgtatctctttg 19491778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 26287985 - 26287923
Alignment:
Q  164 ttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattgg 226  Q
    ||||| |||||| ||| || ||||||||||||||||| ||||||||| | |||| ||||||||    
T  26287985 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattgg 26287923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 26301242 - 26301180
Alignment:
Q  164 ttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattgg 226  Q
    ||||| |||||| ||| || ||||||||||||||||| ||||||||| | |||| ||||||||    
T  26301242 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattgg 26301180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 26313236 - 26313174
Alignment:
Q  164 ttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattgg 226  Q
    ||||| |||||| ||| || ||||||||||||||||| ||||||||| | |||| ||||||||    
T  26313236 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattgg 26313174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 28251627 - 28251573
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||||| |||| |||||| ||||||||||| |||||||  ||||||||||||||||    
T  28251627 tggatcggagggctgctctctcccccatactaggtcaatttggaccgaactgggt 28251573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 44721118 - 44721172
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||||||||||||||||| |||||| || | |||||||  ||||||||||||||||    
T  44721118 tggattggagagctgctctctcccgcagactaggtcaatttggaccgaactgggt 44721172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 1746352 - 1746296
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttga 177  Q
    ||||||||||||| ||||   |||||||||||||||||||| |||||||| ||||||    
T  1746352 ttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttga 1746296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 159
Target Start/End: Original strand, 10929812 - 10929871
Alignment:
Q  101 gaaaaaggatagaaattatgttttgttctttgtgagcttg--caagctaatttcttgtaac 159  Q
    ||||| || |||||||||||||| ||||||||||||||||   ||||||||||||||||||    
T  10929812 gaaaatgggtagaaattatgttt-gttctttgtgagcttgttgaagctaatttcttgtaac 10929871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 33037806 - 33037881
Alignment:
Q  149 tttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattgg 226  Q
    ||||||||||||| |||||| ||||||  || || ||||||||||||||||| ||||||||| | |||| ||||||||    
T  33037806 tttcttgtaaccc-tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 33037881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 240
Target Start/End: Complemental strand, 33079786 - 33079689
Alignment:
Q  145 ctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatct-cccccata-gtaggtcatattggaccgaactgggtta 240  Q
    |||||||||||||||| | ||||||||||    || || ||||||||||||||| | ||| |||||| | ||||||||||||||  ||||||||||||    
T  33079786 ctaatttcttgtaacctccttgtatcactaatttcatagtggattggagagctgatctctccccccagatgtaggtcatattgggtcgaactgggtta 33079689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 4283558 - 4283613
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||| ||||||||||||   |||||||||||||||||||| |||||||| |||||    
T  4283558 ttgttttttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttg 4283613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 15212820 - 15212875
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||| ||||   |||||||||||||||||||| |||||||| |||||    
T  15212820 ttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttg 15212875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 160
Target Start/End: Original strand, 25689968 - 25690027
Alignment:
Q  101 gaaaaaggatagaaattatgttttgttctttgtgagcttg-caagctaatttcttgtaacc 160  Q
    |||||||| ||||||||| | ||||||| |||||| |||| ||||||||||||||||||||    
T  25689968 gaaaaagg-tagaaattagggtttgttcattgtgaacttgtcaagctaatttcttgtaacc 25690027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 31218291 - 31218346
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||| ||||   |||||||||||||||||||| |||||||| |||||    
T  31218291 ttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttg 31218346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 240
Target Start/End: Original strand, 32339584 - 32339640
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggtta 240  Q
    ||||| |||| |||||| ||||||||| | |||||||  ||||||||||||||||||    
T  32339584 tggatcggagggctgctctctcccccagactaggtcaatttggaccgaactgggtta 32339640  T

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Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 168
Target Start/End: Complemental strand, 37021113 - 37021017
Alignment:
Q  73 taggattcattgagagtgtgggtgacttga-aaaaggatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgta 168  Q
    |||||||||||| |||| ||  |||||||| |||| | ||||||||||| ||| ||||| ||||| |||  | ||||||||||||| || |||||||    
T  37021113 taggattcattgtgagtttgactgacttgacaaaatggtagaaattatggtttattcttcgtgagattgtgatctaatttcttgtatcctctttgta 37021017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 40221779 - 40221834
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||||||||   || ||||||||||||||||| |||||||| |||||    
T  40221779 ttgttctttgtgagcttgttgaaactaatttcttgtaacccatttgtatctctttg 40221834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 114; Significance: 1e-57; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 2 - 344
Target Start/End: Complemental strand, 10978 - 10631
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgg-gttttctcttaggattcat-tga-gagtgtgggtgac 98  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||   ||||||||||||||||||| | | ||| |||||||||    
T  10978 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttcttttttctgttttctcttaggattcatatcatgagagtgggtgac 10879  T
Q  99 ttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagct 197  Q
       ||| || |||||||||| || |||||||| ||| |||||| || ||||||||||||||| | |||||| |||||| ||| || ||||||||||||||    
T  10878 acaaaatag-atagaaattaggtcttgttcttgtgtaagcttgtaaactaatttcttgtaactcttttgtaacactttcatcttagtggattggagagct 10780  T
Q  198 gctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgatta 294  Q
    ||| ||||||||| | |||||||||||||||||||||||||  |  || |||||||||||| || || |||| | || |||||| || ||| ||||||||    
T  10779 gctctctcccccaaattaggtcatattggaccgaactgggtcaataatcttggtgtgtttg-ttcctctctttcattgcttatctttattgctttgatta 10681  T
Q  295 tgtttgtggtgatgctttacacttagatttaagtcagtttgttgttgttg 344  Q
    || |||||||| |||| |||||||||||||| ||| |||| |||||||||    
T  10680 tgcttgtggtgttgctctacacttagatttaggtctgttttttgttgttg 10631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 112; Significance: 2e-56; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 2 - 344
Target Start/End: Complemental strand, 5932 - 5586
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggat---tcattgagagtgtgggtgac 98  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||   ||||||||||||||||||||    
T  5932 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcatcattgagagtgtgggtgac 5833  T
Q  99 ttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagct 197  Q
       |||| |  ||||||||| || |||||||| ||| |||||  |||||||||||||||| | | |||||| |||||| ||| || ||||||| || |||    
T  5832 -acaaaatgagtagaaattaagtcttgttcttgtgtaagcttataagctaatttcttgtatctcttttgtaacactttcatcatagtggattgaagggct 5734  T
Q  198 gctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgatta 294  Q
    ||| ||||||||| | |||||||||||||||||||||||||  || || |||||||||||| || ||||||| | || |||||| || ||| ||||||||    
T  5733 gctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttg-ttcctttctttcattgcttatctttattgctttgatta 5635  T
Q  295 tgtttgtggtgatgctttacacttagatttaagtcagtttgttgttgttg 344  Q
    || |||||||| | || ||||||||||| || ||| |||| |||||||||    
T  5634 tgcttgtggtgtttctctacacttagatctaggtctgttt-ttgttgttg 5586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 2 - 348
Target Start/End: Complemental strand, 2741 - 2388
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctcttaggat---tcattgagagtgtgggtgac 98  Q
    ||||||||||||| ||  |||||||||||||||||||||||||| |||||||||| ||||| ||||| |||||||||   ||||||||||||||||||||    
T  2741 cattgtaaacaccttgcgtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttatcttaggattcatcattgagagtgtgggtgac 2642  T
Q  99 ttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagct 197  Q
       |||| || |||||||||  | |||||||| ||| |||||  ||||||||||||| |||  | |||||| |||||| ||| || |||||||||| |||    
T  2641 -acaaaatgggtagaaattagttcttgttcttgtgtaagcttataagctaatttcttataattcttttgtaacactttcatcatagtggattggagggct 2543  T
Q  198 gctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgatta 294  Q
    ||| ||||||||| | |||||||||||||| ||||||||||  || || |||||||||||| || ||||||| | || |||||| || ||| ||||||||    
T  2542 gctgtctcccccagattaggtcatattggagcgaactgggtcaacaatcttggtgtgtttg-ttcctttctttcattgcttatctttattgctttgatta 2444  T
Q  295 tgtttgtggtgatgctttacacttagatttaagtcag--tttgttgttgttgcttg 348  Q
    || |||||||| || | ||||||||||| || ||| |  |||||||||||||||||    
T  2443 tgcttgtggtgttgttctacacttagatctaggtctgtttttgttgttgttgcttg 2388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 2 - 238
Target Start/End: Original strand, 133129 - 133367
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctctt-aggattcatt---gagagtgtgggtga 97  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||| ||||| ||||| || ||||||| ||| ||||||   ||||| |||||  |    
T  133129 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaa-gcttccttttgtgtcttctctttagggttcattattgagagagtgggaaa 133227  T
Q  98 cttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaattt-cttgtaacccctttgtatcactttgatcctaatggattggagag 195  Q
    |    ||| || ||||||||| || |||||||| ||| || |||||||||| ||| |||||||| | |||||| || ||| ||| || ||||||||||||    
T  133228 cac--aaatgggtagaaattaggtcttgttcttgtgtaagtttgcaagctatttttcttgtaactc-tttgtaacattttcatcatagtggattggagag 133324  T
Q  196 ctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||||| ||||||||||| |||||||||||| ||| ||||||||    
T  133325 ctgctctctcccccatattaggtcatattgaacctaactgggt 133367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 48 - 325
Target Start/End: Complemental strand, 17463 - 17184
Alignment:
Q  48 aaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagct 146  Q
    |||| |||| ||||| |||||||||||||||||||| |||||||| |||||   ||| ||| ||||||||| || |||||||| ||| |||||  |||||    
T  17463 aaaaacttccttttgtgttttctcttaggattcattaagagtgtgagtgacacaaaatagg-tagaaattaggtcttgttcttgtgtaagcttataagct 17365  T
Q  147 aatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt-taccata 245  Q
    ||||||||||||| | |||||| |||||| ||| ||||||||||||| | |||| |||  |||||| |||||||||||| ||||||||||||  || ||     
T  17364 aatttcttgtaactcttttgtaacactttcatcataatggattggagggttgctctctttcccatattaggtcatattgaaccgaactgggtcaacaatt 17265  T
Q  246 ttggtgtgtttgttttctttcttgc-tttcttatc-ttgttgttttgattatgtttgtggtgatgctttacacttagattta 325  Q
    ||||||||||||  | ||||||| | ||||||||| || ||| ||| |||||| |||||||| |||| || |||||||||||    
T  17264 ttggtgtgtttg-ctcctttctttcatttcttatctttattgctttaattatgcttgtggtgttgctctatacttagattta 17184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 68; Significance: 3e-30; HSPs: 3)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 2 - 238
Target Start/End: Original strand, 8267 - 8506
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctctt--aggattcatt---gagagtgtgggtg 96  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||| ||||| ||||| || |||||||  ||| ||||||   ||||| |||||      
T  8267 cattgtaaacaccttgggtagtgagatttcaccattggaaggattaaaa-gcttccttttgtgtcttctcttttagggttcattattgagagagtgggaa 8365  T
Q  97 acttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaattt-cttgtaacccctttgtatcactttgatcctaatggattggaga 194  Q
    ||   || | |  ||||||||| || |||||||| ||| ||||||||||||| ||| |||||||| | |||||| |||||| ||| || |||||||||||    
T  8366 acacaaatacg--tagaaattaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaactc-tttgtaacactttcatcatagtggattggaga 8462  T
Q  195 gctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||| ||||||||| | |||||||||||||||||||||||||    
T  8463 gctgctctctcccccagattaggtcatattggaccgaactgggt 8506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 22343 - 22397
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||||| |||| |||||| ||||||||| | ||||||| |||||||||||||||||    
T  22343 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggt 22397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 24618 - 24672
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||||| |||| |||||| ||||||||| | ||||||| |||||||||||||||||    
T  24618 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggt 24672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 238
Target Start/End: Original strand, 43811 - 44048
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctctt-aggattcatt-----gagagtgtgggt 95  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||| ||||| ||||| || ||||||| ||| ||||||     ||||| ||||      
T  43811 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaa-gcttccttttgtgtcttctctttagggttcattattgagagagagtggaa 43909  T
Q  96 gacttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggaga 194  Q
     ||    ||| || ||||||||| || |||||||| | | ||||||||||||| ||||||||||| | |||||| |||||| ||| || |||||||||||    
T  43910 cac----aaatgggtagaaattaggtcttgttcttgtataagcttgcaagctattttcttgtaactc-tttgtaacactttcatcatagtggattggaga 44004  T
Q  195 gctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||| ||||||||| | ||| |||||||||||||||||||||    
T  44005 gctgctctctcccccagaatagatcatattggaccgaactgggt 44048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 2 - 238
Target Start/End: Original strand, 36682 - 36919
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctctt-aggattcatt---gagagtgtgggtga 97  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| |||| ||||| ||||| || ||||||| ||| ||||||   ||||| |||||  |    
T  36682 cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaa-gcttccttttgtgtcttctctttagggttcattattgagagagtgggaaa 36780  T
Q  98 cttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagc 196  Q
    |    ||| || ||||||| |||| |||||||| ||| ||||||||||||| ||||||||||| | |||||| |||||| ||| || ||| |||| ||||    
T  36781 cac--aaatgggtagaaatcatgtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcatcatagtgggttggcgagc 36877  T
Q  197 tgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||| ||| ||| | | |||||||||||||||||||||||||    
T  36878 tgctctcttccctagattaggtcatattggaccgaactgggt 36919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 2 - 348
Target Start/End: Complemental strand, 85930 - 85581
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggtttt-ctcttaggattcat--tgagagtgtgggtgac 98  Q
    ||||||||||||  ||| |||||||||||||||||||||||||| ||||| |||| ||||| ||||| ||||||| ||||||  || | | ||||| |||    
T  85930 cattgtaaacactttgggtagtgagatttcaccattggaaggatcaaaaa-cttccttttgtgtttttctcttagaattcatattgtgggagtgggagac 85832  T
Q  99 ttgaaaaaggatagaaattatgttttgttctt-tgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagct 197  Q
       |||| || ||||||||| || ||| |||| ||| |||||  |||||||||||||||||| | |||||| |||||| ||| |  |||||||||||||     
T  85831 ac-aaaatgggtagaaattaggtcttgctcttgtgtaagcttttaagctaatttcttgtaactc-tttgtaacactttcatcatggtggattggagagcc 85734  T
Q  198 gctatctcccccatagtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgc-tttcttatcttgttgttttgattat 295  Q
    ||| ||||||||| | ||||||||||||||| |||||||||  || || | | |||||||||| | |||||| | || ||||||||  || |||| ||||    
T  85733 gctctctcccccagattaggtcatattggactgaactgggtcaacaatctagatgtgtttgttct-tttctttcattgcttatctttgtgctttggttat 85635  T
Q  296 gtttgtggtgatgctttacacttagatttaagtcag-tttgttgttgttgcttg 348  Q
    | ||||| || |||| ||||||||||| || ||| | ||| |||||||||||||    
T  85634 gcttgtgatgttgctctacacttagatctaggtctgttttattgttgttgcttg 85581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 64 - 229
Target Start/End: Complemental strand, 14869 - 14702
Alignment:
Q  64 gttttctcttaggattca--ttgagagtgtgggtgacttgaaaaag-gatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacc 160  Q
    ||||||||||||||||||  ||| |||||||||||||||||||||  | ||| || || | || |||||||||||||||  |||||||||||| ||||||    
T  14869 gttttctcttaggattcactttgtgagtgtgggtgacttgaaaaataggtaggaactagggttagttctttgtgagcttttaagctaatttctcgtaacc 14770  T
Q  161 cctttgtatcactttgatcctaatggattggagagctgctatctcccccatagtaggtcatattggacc 229  Q
     |||||||||||| | ||| |||| ||| |||| | |||| |||| ||||||||| ||||| |||||||    
T  14769 tctttgtatcactcttatcataattgatcggag-gttgctctctctcccatagtatgtcattttggacc 14702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 434546 - 434622
Alignment:
Q  101 gaaaaaggatagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    |||||||| ||||||||| | || ||||||||||| ||||   |||||||||||||||||||| |||||||| |||||    
T  434546 gaaaaagggtagaaattagggtt-gttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttg 434622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 38 - 173
Target Start/End: Original strand, 102380 - 102516
Alignment:
Q  38 ggaaggataaaaaagcttctttttgggttttctcttaggattcattgagagtgtgggtgacttgaaaaa-ggatagaaattatgttttgttctttgtgag 136  Q
    |||||||| ||||||| || ||| | |||||||||| | ||| |||  ||||||| ||||||||||||| || ||||||||| | |||||| ||||||||    
T  102380 ggaaggatcaaaaagcatcctttagtgttttctcttcgaatttattatgagtgtgtgtgacttgaaaaatgggtagaaattagggtttgttttttgtgag 102479  T
Q  137 cttgcaagctaatttcttgtaacccctttgtatcact 173  Q
    |||  ||| ||||||||||||||| ||||||||||||    
T  102480 cttttaagataatttcttgtaacctctttgtatcact 102516  T

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Target: scaffold0076 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 113 - 341
Target Start/End: Original strand, 15950 - 16181
Alignment:
Q  113 aaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctcccccata 212  Q
    |||||| ||||||||||||||| | ||  ||||||||||||||||||  |||||||| ||| | ||| || |||||| ||| | || | ||| | |||||    
T  15950 aaattaggttttgttctttgtgggtttttaagctaatttcttgtaacatctttgtataactcttatcatagtggattagagtgttgttctcttctccata 16049  T
Q  213 gtaggtcatattggaccgaactgggt-taccatattggtgtgtttgttttctttcttgctttc-ttatc-ttgttgttttgattatgtttgtggtgatgc 309  Q
    |||| | || ||||||||||||||||  |  |||||||||||||  ||||||| ||| || || ||||| |||||| ||||| ||||||||||||| ||     
T  16050 gtagattattttggaccgaactgggtaaataatattggtgtgttgtttttcttcctttctctctttatctttgttgctttgaatatgtttgtggtgttgt 16149  T
Q  310 tttacacttagatttaagtcagtttgttgttg 341  Q
    || |||||||||| || || | ||||||||||    
T  16150 ttcacacttagatctaggtaaatttgttgttg 16181  T

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Target: scaffold0188 (Bit Score: 45; Significance: 1e-16; HSPs: 4)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 110 - 284
Target Start/End: Original strand, 24003 - 24179
Alignment:
Q  110 tagaaattatgttttgttctt-tgtgagcttgcaagctaattt-cttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctccc 207  Q
    |||||| ||||  |||||||| ||| ||||||||||||| ||| |||||||||| |||||| |||||| ||| || ||||||||||||||||| ||||||    
T  24003 tagaaactatgacttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctccc 24101  T
Q  208 ccatagtaggtcatattggaccgaactgggttacca----tattggtgtgtttgttttctttcttgctttcttatcttgtt 284  Q
    ||| | |||| |||||||| | ||||||||| | ||    | ||||||||||||  ||||| ||| |||||||||||||||    
T  24102 ccagattaggccatattgg-ctgaactgggtcaacaatctttttggtgtgtttg--ttcttcctttctttcttatcttgtt 24179  T

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Target: scaffold0188; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 226
Target Start/End: Original strand, 17910 - 18027
Alignment:
Q  110 tagaaattatgttttgttctt-tgtgagcttgcaagctaattt-cttgtaacccctttgtatcactttgatcctaatggattggagagctgctatctccc 207  Q
    |||||| ||||  |||||||| ||| ||||||||||||| ||| |||||||||| |||||| |||||| ||| || ||||||||||||||||| ||||||    
T  17910 tagaaactatgacttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctccc 18008  T
Q  208 ccatagtaggtcatattgg 226  Q
    ||| | |||| ||||||||    
T  18009 ccagattaggccatattgg 18027  T

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Target: scaffold0188; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 45
Target Start/End: Original strand, 17800 - 17843
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggat 45  Q
    |||||||| |||| ||| ||||||||||||||||||||||||||    
T  17800 cattgtaatcaccttgggtagtgagatttcaccattggaaggat 17843  T

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Target: scaffold0188; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 45
Target Start/End: Original strand, 23893 - 23936
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggat 45  Q
    |||||||| |||| ||| ||||||||||||||||||||||||||    
T  23893 cattgtaatcaccttgggtagtgagatttcaccattggaaggat 23936  T

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Target: scaffold0184 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 247 - 316
Target Start/End: Original strand, 29580 - 29649
Alignment:
Q  247 tggtgtgtttgttttctttcttgctttcttatcttgttgttttgattatgtttgtggtgatgctttacac 316  Q
    |||||| ||||| ||||||||| |||| ||||||||||| |||||||||| |||||||| ||||||||||    
T  29580 tggtgtatttgtcttctttcttacttttttatcttgttgctttgattatgcttgtggtgttgctttacac 29649  T

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Target: scaffold0098 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 45445 - 45375
Alignment:
Q  2 cattgtaaacaccctggttagtgagatttcaccattggaaggataaaaaagcttctttttgggttttctctt 73  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||  ||||||||| ||||| || |||||||    
T  45445 cattgtaaacaccttgggtagtgagatttcaccattggaaggat-caaaagcttccttttgtgtcttctctt 45375  T

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Target: scaffold0098; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 45317 - 45266
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactg 235  Q
    ||||||||||||||||| ||||||||| | |||||||||||| |||||||||    
T  45317 tggattggagagctgctctctcccccagattaggtcatattgaaccgaactg 45266  T

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Target: scaffold0267 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 269 - 323
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    |||||||||| |||||| ||||||||| | ||||||| |||||||||||||||||    
T  269 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggt 323  T

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Target: scaffold0466 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 7361 - 7416
Alignment:
Q  123 ttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttg 176  Q
    ||||||||||||||||||   |||||||||||||||||||| |||||||| |||||    
T  7361 ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttg 7416  T

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Target: scaffold1519 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 177
Target Start/End: Original strand, 930 - 1006
Alignment:
Q  102 aaaaaggatagaaattatgttttgttctttgtgagcttgc--aagctaatttcttgtaacccctttgtatcactttga 177  Q
    ||||||| ||||||||| | || ||||||||||| ||||   |||||||||||||||||||| |||||||| ||||||    
T  930 aaaaagggtagaaattagggtt-gttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttga 1006  T

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Target: scaffold0154 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 11533 - 11479
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||||||||||||||||| ||||||||| | |||||||  ||||||||||| ||||    
T  11533 tggattggagagctgctctctcccccagactaggtcaatttggaccgaaccgggt 11479  T

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Target: scaffold0025 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 69352 - 69298
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggt 238  Q
    ||||| ||||||||||| ||||||||| | |||||||  ||||||||||||||||    
T  69352 tggatcggagagctgctctctcccccagactaggtcaatttggaccgaactgggt 69298  T

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Target: scaffold0135 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 240
Target Start/End: Original strand, 35083 - 35138
Alignment:
Q  184 tggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggtta 240  Q
    ||||||||||||||||| ||||||||| | |||| |||||||| | |||||||||||    
T  35083 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtta 35138  T

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