View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8107_low_8 (Length: 448)

Name: NF8107_low_8
Description: NF8107
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8107_low_8
NF8107_low_8
[»] chr1 (1 HSPs)
chr1 (15-434)||(36315043-36315465)
[»] chr8 (45 HSPs)
chr8 (15-240)||(19344454-19344679)
chr8 (15-433)||(19389897-19390315)
chr8 (74-240)||(19504652-19504818)
chr8 (31-240)||(19336766-19336975)
chr8 (16-238)||(19489443-19489664)
chr8 (59-246)||(19470107-19470294)
chr8 (59-246)||(19541031-19541218)
chr8 (59-246)||(19591480-19591667)
chr8 (56-241)||(19458413-19458598)
chr8 (56-241)||(19556091-19556276)
chr8 (43-246)||(19410120-19410323)
chr8 (43-246)||(19457139-19457342)
chr8 (43-246)||(19523736-19523939)
chr8 (43-240)||(19354801-19354995)
chr8 (43-233)||(19375930-19376120)
chr8 (65-240)||(19173419-19173597)
chr8 (15-134)||(19373462-19373581)
chr8 (43-238)||(19404064-19404256)
chr8 (43-238)||(19447846-19448041)
chr8 (43-238)||(19533035-19533230)
chr8 (336-434)||(19410434-19410532)
chr8 (336-434)||(19457453-19457551)
chr8 (336-434)||(19523527-19523625)
chr8 (330-433)||(19448135-19448238)
chr8 (330-433)||(19532838-19532941)
chr8 (276-433)||(19468957-19469108)
chr8 (328-433)||(19376236-19376341)
chr8 (330-433)||(19555878-19555981)
chr8 (276-433)||(19344742-19344893)
chr8 (336-433)||(19469893-19469993)
chr8 (336-433)||(19540817-19540917)
chr8 (336-433)||(19591781-19591881)
chr8 (276-433)||(19404321-19404472)
chr8 (330-422)||(19468140-19468231)
chr8 (336-432)||(19489728-19489824)
chr8 (276-422)||(19173216-19173356)
chr8 (342-434)||(19504449-19504544)
chr8 (197-241)||(19468341-19468385)
chr8 (328-434)||(19337069-19337178)
chr8 (276-390)||(19355043-19355151)
chr8 (330-377)||(19185068-19185115)
chr8 (336-391)||(19287338-19287393)
chr8 (197-246)||(19469168-19469217)
chr8 (342-377)||(16004306-16004341)
chr8 (330-377)||(19458256-19458303)


Alignment Details
Target: chr1 (Bit Score: 385; Significance: 0; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 385; E-Value: 0
Query Start/End: Original strand, 15 - 434
Target Start/End: Complemental strand, 36315465 - 36315043
Alignment:
Q  15 attattctccttcgggtttggtgagtacatttctcttcgttttgaaacaatatt---cattgatcatgataagctttagaataaagaaacaaattatttt 111  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||    
T  36315465 attattctccttcgggtttgatgagtacatttctcttctttttgaaacaatattattcattgatcatgataagctttagaataaagaaacaaattatttt 36315366  T
Q  112 gatatacttatggttgtggtggagtaccactactagtctttatgttaatgcaacaaacgatagtttgaagccaggtgatacatttaattccaattccacg 211  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36315365 gatatacttatggttgtggtggagtactactactagtctttatgttaatgcaacaaacgatagtttgaagccaggtgatacatttaattccaattccacg 36315266  T
Q  212 ctatgttctaaacaaggcaagtattgtcttgaattgagaagatacttgattgtaatagatgttaatggcacagtagtgtggttttatgatagaaatcacc 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  36315265 ctatgttctaaacaaggcaagtattgtcttgaattgagaagatacttgattgtaatagatgttaatggcacagtagtgtggttttatgatagaaatcatc 36315166  T
Q  312 cctttgacttagaagaagattcaacagttttatcactagattactctggtgtgctcaaaatagaatgtcaagataggaaaccaatgatcatttacacttc 411  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  36315165 cctttgactcagaagaagattcaacagttttatcactagattactctggtgttctcaaaatagaatgtcaagataggaaaccaatgatcatttacacttc 36315066  T
Q  412 acctcaacccaacaacaacactg 434  Q
    |||||||||||||||||||||||    
T  36315065 acctcaacccaacaacaacactg 36315043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 138; Significance: 6e-72; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 15 - 240
Target Start/End: Original strand, 19344454 - 19344679
Alignment:
Q  15 attattctccttcgggtttggtgagtacatttctcttcgttttgaaacaatattcattgatcatgataagctttagaataaagaaacaaattattttgat 114  Q
    |||||||||||||||||| | | |||| |||||||||| |||||||||||||||||| |||||||||||||||||  |||||||||||| || | |||||    
T  19344454 attattctccttcgggttcgataagtatatttctcttctttttgaaacaatattcatcgatcatgataagctttaagataaagaaacaagttgtattgat 19344553  T
Q  115 atacttatggttgtggtggagtaccactactagtctttatgttaatgcaacaaacgatagtttgaagccaggtgatacatttaattccaattccacgcta 214  Q
    |||||||||||||||||||| |||  ||||||   ||| ||||||||||||||| |||||||||||||||||||||||||| |||||||| |||| ||||    
T  19344554 atacttatggttgtggtggattacttctactaacatttgtgttaatgcaacaaatgatagtttgaagccaggtgatacattgaattccaaatccaagcta 19344653  T
Q  215 tgttctaaacaaggcaagtattgtct 240  Q
    ||||||||||||||||||||||||||    
T  19344654 tgttctaaacaaggcaagtattgtct 19344679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 15 - 433
Target Start/End: Original strand, 19389897 - 19390315
Alignment:
Q  15 attattctccttcgggtttggtgagtacatttctcttcgttttgaaacaatattcattgatcatgataagctttagaataaagaaacaaattattttgat 114  Q
    ||||||||| ||||||||| ||||||| |||||||||| ||||||||||||  ||||  ||||||||||||| |  ||||||||||||| || | |||||    
T  19389897 attattctcgttcgggtttagtgagtatatttctcttctttttgaaacaattatcatcaatcatgataagctatgaaataaagaaacaagttgtattgat 19389996  T
Q  115 atacttatggttgtggtggagtaccactactagtctttatgttaatgcaacaaacgatagtttgaagccaggtgatacatttaattccaattccacgcta 214  Q
    |||||||||||||||||||| |||  ||||||   ||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||    
T  19389997 atacttatggttgtggtggattacttctactaacatttgtgttaatgcaacaaatgatagtttgaagccaggtgatacattgaattccaattccaagcta 19390096  T
Q  215 tgttctaaacaaggcaagtattgtc-ttgaattgagaa-----gatacttgattgtaatagatgttaatggcacagtagtgtggttttatgatagaaatc 308  Q
     |||||||||||| ||||||||||| || |||  | ||     | ||||| | | ||  |  ||||||| |||||| ||||||||||||| || ||||||    
T  19390097 cgttctaaacaagacaagtattgtcttttaatcaacaagggtggttacttaactatagcaactgttaatcgcacaggagtgtggttttataatcgaaatc 19390196  T
Q  309 acccctttgacttagaagaagattcaacagttttatcactagattactctggtgtgctcaaaatagaatgtcaagataggaaaccaatgatcatttacac 408  Q
    | ||      | |||| | | | ||| ||||||||||| || | ||| ||||||||||||||||||||| |||| ||||||||||||| ||||||||| |    
T  19390197 aacc------cgtagacgtaaactcagcagttttatcattaaactacactggtgtgctcaaaatagaatctcaaaataggaaaccaataatcatttactc 19390290  T
Q  409 ttcacctcaacccaacaacaacact 433  Q
    ||||||||||||||  |||||||||    
T  19390291 ttcacctcaacccataaacaacact 19390315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 74 - 240
Target Start/End: Complemental strand, 19504818 - 19504652
Alignment:
Q  74 atcatgataagctttagaataaagaaacaaattattttgatatacttatggttgtggtggagtaccactactagtctttatgttaatgcaacaaacgata 173  Q
    ||||||||||| ||   ||||||||||||| || | ||||||||||||||||||||||||||||| ||||||||| ||| || ||||||||| || ||||    
T  19504818 atcatgataagtttcgaaataaagaaacaagttgtattgatatacttatggttgtggtggagtactactactagtatttgtggtaatgcaacgaaagata 19504719  T
Q  174 gtttgaagccaggtgatacatttaattccaattccacgctatgttctaaacaaggcaagtattgtct 240  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  19504718 gtttgaagccaggtgatacattgaattccaattccacgctatgttctaaacaagacaagtattgtct 19504652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 31 - 240
Target Start/End: Original strand, 19336766 - 19336975
Alignment:
Q  31 tttggtgagtacatttctcttcgttttgaaacaatattcattgatcatgataagctttagaataaagaaacaaattattttgatatacttatggttgtgg 130  Q
    |||||| |||| |||||||||| ||||||||||||||||||  |||||||||||||||| || ||| ||||||||| ||| |||||||||||||||||||    
T  19336766 tttggtaagtatatttctcttctttttgaaacaatattcatcaatcatgataagctttaaaagaaataaacaaattgtttggatatacttatggttgtgg 19336865  T
Q  131 tggagtaccactactagtctttatgttaatgcaacaaacgatagtttgaagccaggtgatacatttaattccaattccacgctatgttctaaacaaggca 230  Q
    ||||  || ||| ||| | ||| |||||| |||||||  |||||||||||||||||||||||||| |||||||| |||| |||||||||| ||||||| |    
T  19336866 tggaacactactgctaatatttgtgttaaagcaacaagtgatagtttgaagccaggtgatacattaaattccaaatccaagctatgttctgaacaaggaa 19336965  T
Q  231 agtattgtct 240  Q
    ||| ||||||    
T  19336966 agttttgtct 19336975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 16 - 238
Target Start/End: Original strand, 19489443 - 19489664
Alignment:
Q  16 ttattctccttcgggtttggtgagtacatttctcttcgttttgaaacaatattcattgatcatgataagctttagaataaagaaacaaattattttgata 115  Q
    |||| |||||| |||||||||||||| |||||||||| ||||||||||||| |||   |||||||||||||||| |||||||||||| | | ||||||||    
T  19489443 ttatactccttggggtttggtgagtatatttctcttcattttgaaacaatactcagcaatcatgataagctttaaaataaagaaacagactgttttgata 19489542  T
Q  116 tacttatggttgtggtggagtaccactactagtctttatgttaatgcaacaaacgatagtttgaagccaggtgatacatttaattccaattccacgctat 215  Q
    | ||| |||||||||| || ||| ||||| ||| ||| ||||||||||||||  |||||||||||||||||||||||| | | || ||| |||| |||||    
T  19489543 tgcttttggttgtggt-gaatactactacgagtatttgtgttaatgcaacaagtgatagtttgaagccaggtgatacagtgacttacaaatccaagctat 19489641  T
Q  216 gttctaaacaaggcaagtattgt 238  Q
    |||| ||||||||||||||||||    
T  19489642 gttccaaacaaggcaagtattgt 19489664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 59 - 246
Target Start/End: Complemental strand, 19470294 - 19470107
Alignment:
Q  59 aaacaatattcattgatcatgataagctttagaataaagaaacaaattattttgatatacttatggttgtggtggagtaccactactagtctttatgtta 158  Q
    |||||||||||||  | |||||||||||||  ||| ||||||||| || | ||||||||||||||||||||||||| |||  ||||||   ||| |||||    
T  19470294 aaacaatattcatcaaacatgataagctttgaaatcaagaaacaagttgtattgatatacttatggttgtggtggattacttctactaacatttgtgtta 19470195  T
Q  159 atgcaacaaacgatagtttgaagccaggtgatacatttaattccaattccacgctatgttctaaacaaggcaagtattgtcttgaatt 246  Q
    |||||||||| |||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||| ||||||| ||||    
T  19470194 atgcaacaaatgatagtttgaagccaggtgatacattgaattccaaatccaagctatgttctaaacaaggcaagttttgtcttcaatt 19470107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 59 - 246
Target Start/End: Complemental strand, 19541218 - 19541031
Alignment:
Q  59 aaacaatattcattgatcatgataagctttagaataaagaaacaaattattttgatatacttatggttgtggtggagtaccactactagtctttatgtta 158  Q
    |||||||||||||  | |||||||||||||  ||| ||||||||| || | ||||||||||||||||||||||||| |||  ||||||   ||| |||||    
T  19541218 aaacaatattcatcaaacatgataagctttgaaatcaagaaacaagttgtattgatatacttatggttgtggtggattacttctactaacatttgtgtta 19541119  T
Q  159 atgcaacaaacgatagtttgaagccaggtgatacatttaattccaattccacgctatgttctaaacaaggcaagtattgtcttgaatt 246  Q
    |||||||||| |||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||| ||||||| ||||    
T  19541118 atgcaacaaatgatagtttgaagccaggtgatacattgaattccaaatccaagctatgttctaaacaaggcaagttttgtcttcaatt 19541031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 59 - 246
Target Start/End: Original strand, 19591480 - 19591667
Alignment:
Q  59 aaacaatattcattgatcatgataagctttagaataaagaaacaaattattttgatatacttatggttgtggtggagtaccactactagtctttatgtta 158  Q
    |||||||||||||  | |||||||||||||  ||| ||||||||| || | ||||||||||||||||||||||||| |||  ||||||   ||| |||||    
T  19591480 aaacaatattcatcaaacatgataagctttgaaatcaagaaacaagttgtattgatatacttatggttgtggtggattacttctactaacatttgtgtta 19591579  T
Q  159 atgcaacaaacgatagtttgaagccaggtgatacatttaattccaattccacgctatgttctaaacaaggcaagtattgtcttgaatt 246  Q
    |||||||||| |||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||| ||||||| ||||    
T  19591580 atgcaacaaatgatagtttgaagccaggtgatacattgaattccaaatccaagctatgttctaaacaaggcaagttttgtcttcaatt 19591667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 56 - 241
Target Start/End: Complemental strand, 19458598 - 19458413
Alignment:
Q  56 ttgaaacaatattcattgatcatgataagctttagaataaagaaacaaattattttgatatacttatggttgtggtggagtaccactactagtctttatg 155  Q
    ||||||||||||||||  ||||||||||||||   ||||||||||||| || | ||||||||||||||||||||||||| ||| ||| ||| | ||| ||    
T  19458598 ttgaaacaatattcatcaatcatgataagcttggaaataaagaaacaagttgtattgatatacttatggttgtggtggattactactgctaatatttgtg 19458499  T
Q  156 ttaatgcaacaaacgatagtttgaagccaggtgatacatttaattccaattccacgctatgttctaaacaaggcaagtattgtctt 241  Q
    || | |||| |   |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  19458498 ttgaagcaaaacgtgatagtttgaagccaggtgatacattgaattccaattccacgctatgttctaaacaaggcaagttttgtctt 19458413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 56 - 241
Target Start/End: Complemental strand, 19556276 - 19556091
Alignment:
Q  56 ttgaaacaatattcattgatcatgataagctttagaataaagaaacaaattattttgatatacttatggttgtggtggagtaccactactagtctttatg 155  Q
    ||||||||||||||||  ||||||||||||||   ||||||||||||| || | ||||||||||||||||||||||||| ||| ||| ||| | ||| ||    
T  19556276 ttgaaacaatattcatcaatcatgataagcttggaaataaagaaacaagttgtattgatatacttatggttgtggtggattactactgctaatatttgtg 19556177  T
Q  156 ttaatgcaacaaacgatagtttgaagccaggtgatacatttaattccaattccacgctatgttctaaacaaggcaagtattgtctt 241  Q
    || | |||| |   |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  19556176 ttgaagcaaaacgtgatagtttgaagccaggtgatacattgaattccaattccacgctatgttctaaacaaggcaagttttgtctt 19556091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 43 - 246
Target Start/End: Original strand, 19410120 - 19410323
Alignment:
Q  43 atttctcttcgttttgaaacaatattcattgatcatgataagctttagaataaagaaacaaattattttgatatacttatggttgtggtggagtaccact 142  Q
    |||||||||| |||||||||||||||||   || ||||||||||||  ||||||||||||| || | ||||||||| |||||||||||||||  || |||    
T  19410120 atttctcttctttttgaaacaatattcaacaatgatgataagctttgaaataaagaaacaagttgtattgatatacctatggttgtggtggaacactact 19410219  T
Q  143 actagtctttatgttaatgcaacaaacgatagtttgaagccaggtgatacatttaattccaattccacgctatgttctaaacaaggcaagtattgtcttg 242  Q
     ||| | ||| |||| | |||||||  |||||||||||||||||||||| ||| |||| ||| |||| ||||||||||||||||||||||| |||||||     
T  19410220 gctaatatttgtgttgaagcaacaagtgatagtttgaagccaggtgataaattgaattacaaatccaagctatgttctaaacaaggcaagttttgtcttc 19410319  T
Q  243 aatt 246  Q
    ||||    
T  19410320 aatt 19410323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 43 - 246
Target Start/End: Original strand, 19457139 - 19457342
Alignment:
Q  43 atttctcttcgttttgaaacaatattcattgatcatgataagctttagaataaagaaacaaattattttgatatacttatggttgtggtggagtaccact 142  Q
    |||||||||| |||||||||||||||||   || ||||||||||||  ||||||||||||| || | ||||||||| |||||||||||||||  || |||    
T  19457139 atttctcttctttttgaaacaatattcaacaatgatgataagctttgaaataaagaaacaagttgtattgatatacctatggttgtggtggaacactact 19457238  T
Q  143 actagtctttatgttaatgcaacaaacgatagtttgaagccaggtgatacatttaattccaattccacgctatgttctaaacaaggcaagtattgtcttg 242  Q
     ||| | ||| |||| | |||||||  |||||||||||||||||||||| ||| |||| ||| |||| ||||||||||||||||||||||| |||||||     
T  19457239 gctaatatttgtgttgaagcaacaagtgatagtttgaagccaggtgataaattgaattacaaatccaagctatgttctaaacaaggcaagttttgtcttc 19457338  T
Q  243 aatt 246  Q
    ||||    
T  19457339 aatt 19457342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 43 - 246
Target Start/End: Complemental strand, 19523939 - 19523736
Alignment:
Q  43 atttctcttcgttttgaaacaatattcattgatcatgataagctttagaataaagaaacaaattattttgatatacttatggttgtggtggagtaccact 142  Q
    |||||||||| |||||||||||||||||   || ||||||||||||  ||||||||||||| || | ||||||||| |||||||||||||||  || |||    
T  19523939 atttctcttctttttgaaacaatattcaacaatgatgataagctttgaaataaagaaacaagttgtattgatatacctatggttgtggtggaacactact 19523840  T
Q  143 actagtctttatgttaatgcaacaaacgatagtttgaagccaggtgatacatttaattccaattccacgctatgttctaaacaaggcaagtattgtcttg 242  Q
     ||| | ||| |||| | |||||||  |||||||||||||||||||||| ||| |||| ||| |||| ||||||||||||||||||||||| |||||||     
T  19523839 gctaatatttgtgttgaagcaacaagtgatagtttgaagccaggtgataaattgaattacaaatccaagctatgttctaaacaaggcaagttttgtcttc 19523740  T
Q  243 aatt 246  Q
    ||||    
T  19523739 aatt 19523736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 43 - 240
Target Start/End: Original strand, 19354801 - 19354995
Alignment:
Q  43 atttctcttcgttttgaaacaatattcattgatcatgataagctttagaataaagaaacaaattattttgatatacttatggttgtggtggagtaccact 142  Q
    |||||||||| |||| |||||||||||||  |||||||||||||||  ||||||||||||| || | ||||||||| ||||||||||||||   | ||||    
T  19354801 atttctcttcttttttaaacaatattcatcaatcatgataagctttgaaataaagaaacaagttgtattgatatacctatggttgtggtgg---aacact 19354897  T
Q  143 actagtctttatgttaatgcaacaaacgatagtttgaagccaggtgatacatttaattccaattccacgctatgttctaaacaaggcaagtattgtct 240  Q
    |||||  ||| |||||| |||||||| |||||||||| ||||||||||| |||  || | |||||||  ||||||||||||||||||| |||||||||    
T  19354898 actagcatttgtgttaaagcaacaaatgatagtttgaggccaggtgataaattggatgcaaattccaacctatgttctaaacaaggcatgtattgtct 19354995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 43 - 233
Target Start/End: Original strand, 19375930 - 19376120
Alignment:
Q  43 atttctcttcgttttgaaacaatattcattgatcatgataagctttagaataaagaaacaaattattttgatatacttatggttgtggtggagtaccact 142  Q
    |||||||||| ||||||||||||||||||  || ||||||||||||  ||||||||||||| || | ||||||||| |||||||||||||||  || |||    
T  19375930 atttctcttctttttgaaacaatattcatcaatgatgataagctttgaaataaagaaacaagttgtattgatatacctatggttgtggtggaacactact 19376029  T
Q  143 actagtctttatgttaatgcaacaaacgatagtttgaagccaggtgatacatttaattccaattccacgctatgttctaaacaaggcaagt 233  Q
     ||| | ||| |||| | |||||||  |||||||||||||||||||||| |||| || | ||||||||||||| ||| |||||||||||||    
T  19376030 gctaatatttgtgttgaagcaacaagtgatagtttgaagccaggtgataaatttgatgcaaattccacgctatattcaaaacaaggcaagt 19376120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 65 - 240
Target Start/End: Complemental strand, 19173597 - 19173419
Alignment:
Q  65 tattcattgatcatgataagctttagaataaagaaacaaattattttgatatacttatggttgtggtggagtaccact---actagtctttatgttaatg 161  Q
    |||||||  |||||||||||||||  ||||||||||||| || | ||||||||||||||||||||||||| ||| |||   |||| | ||| |||||| |    
T  19173597 tattcatcaatcatgataagctttgaaataaagaaacaagttgtattgatatacttatggttgtggtggaatacaactgctactaatatttgtgttaaag 19173498  T
Q  162 caacaaacgatagtttgaagccaggtgatacatttaattccaattccacgctatgttctaaacaaggcaagtattgtct 240  Q
    ||||||  |||||||||||||||||||||||||| ||||| || |||| | ||||||||||||||||||||| ||||||    
T  19173497 caacaagtgatagtttgaagccaggtgatacattgaattcgaaatccaagttatgttctaaacaaggcaagttttgtct 19173419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 19373462 - 19373581
Alignment:
Q  15 attattctccttcgggtttggtgagtacatttctcttcgttttgaaacaatattcattgatcatgataagctttagaataaagaaacaaattattttgat 114  Q
    |||||||||||||||||| | | |||| |||||||||| |||||||||||||||||| |||||||||||||||||  |||||||||||| || | |||||    
T  19373462 attattctccttcgggttcgatcagtatatttctcttctttttgaaacaatattcatcgatcatgataagctttaagataaagaaacaagttgtattgat 19373561  T
Q  115 atacttatggttgtggtgga 134  Q
    ||||||||||||||||||||    
T  19373562 atacttatggttgtggtgga 19373581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 43 - 238
Target Start/End: Original strand, 19404064 - 19404256
Alignment:
Q  43 atttctcttcgttttgaaacaatattcattgatcatgataagctttagaataaagaaacaaattattttgatatacttatggttgtggtggagtaccact 142  Q
    |||||||||| ||||||||||||||||||  || |||||||| |||  ||||||||||||| || | ||||||||| ||||||||||||||   | |||     
T  19404064 atttctcttctttttgaaacaatattcatcaatgatgataagttttgaaataaagaaacaagttgtattgatatacctatggttgtggtgg---aacacg 19404160  T
Q  143 actagtctttatgttaatgcaacaaacgatagtttgaagccaggtgatacatttaattccaattccacgctatgttctaaacaaggcaagtattgt 238  Q
    |||||  ||| |||||| |||| ||| |||||||||||||||||||||| |||  || | |||||||  ||||||||||||||||| |||||||||    
T  19404161 actagcatttgtgttaaagcaataaatgatagtttgaagccaggtgataaattggatgcaaattccaacctatgttctaaacaaggtaagtattgt 19404256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 43 - 238
Target Start/End: Original strand, 19447846 - 19448041
Alignment:
Q  43 atttctcttcgttttgaaacaatattcattgatcatgataagctttagaataaagaaacaaattattttgatatacttatggttgtggtggagtaccact 142  Q
    |||||||||| |||||||| |||||||||  |||||||||||||||  |||||||||||||  | | ||||||||| |||||||||||||||  ||   |    
T  19447846 atttctcttctttttgaaaaaatattcatgaatcatgataagctttgaaataaagaaacaagatctattgatatacctatggttgtggtggaacactgtt 19447945  T
Q  143 actagtctttatgttaatgcaacaaacgatagtttgaagccaggtgatacatttaattccaattccacgctatgttctaaacaaggcaagtattgt 238  Q
     ||| | ||| |||| | |||||||  |||||||||||||||||||||| |||| || | ||||||||||||| ||| ||||||||||||| ||||    
T  19447946 gctaatatttgtgttgaagcaacaagtgatagtttgaagccaggtgataaatttgatgcaaattccacgctatattcaaaacaaggcaagttttgt 19448041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 43 - 238
Target Start/End: Complemental strand, 19533230 - 19533035
Alignment:
Q  43 atttctcttcgttttgaaacaatattcattgatcatgataagctttagaataaagaaacaaattattttgatatacttatggttgtggtggagtaccact 142  Q
    |||||||||| |||||||| |||||||||  |||||||||||||||  |||||||||||||  | | ||||||||| |||||||||||||||  ||   |    
T  19533230 atttctcttctttttgaaaaaatattcatgaatcatgataagctttgaaataaagaaacaagatctattgatatacctatggttgtggtggaacactgtt 19533131  T
Q  143 actagtctttatgttaatgcaacaaacgatagtttgaagccaggtgatacatttaattccaattccacgctatgttctaaacaaggcaagtattgt 238  Q
     ||| | ||| |||| | |||||||  |||||||||||||||||||||| |||| || | ||||||||||||| ||| ||||||||||||| ||||    
T  19533130 gctaatatttgtgttgaagcaacaagtgatagtttgaagccaggtgataaatttgatgcaaattccacgctatattcaaaacaaggcaagttttgt 19533035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 336 - 434
Target Start/End: Original strand, 19410434 - 19410532
Alignment:
Q  336 cagttttatcactagattactctggtgtgctcaaaatagaatgtcaagataggaaaccaatgatcatttacacttcacctcaacccaacaacaacactg 434  Q
    ||||| |||||||||| ||||||||||||||||||||||||| |||| ||||||||||||| ||||||||| ||||||||||||| | |||||||||||    
T  19410434 cagttctatcactagactactctggtgtgctcaaaatagaatctcaaaataggaaaccaataatcatttactcttcacctcaacctaccaacaacactg 19410532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 336 - 434
Target Start/End: Original strand, 19457453 - 19457551
Alignment:
Q  336 cagttttatcactagattactctggtgtgctcaaaatagaatgtcaagataggaaaccaatgatcatttacacttcacctcaacccaacaacaacactg 434  Q
    ||||| |||||||||| ||||||||||||||||||||||||| |||| ||||||||||||| ||||||||| ||||||||||||| | |||||||||||    
T  19457453 cagttctatcactagactactctggtgtgctcaaaatagaatctcaaaataggaaaccaataatcatttactcttcacctcaacctaccaacaacactg 19457551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 336 - 434
Target Start/End: Complemental strand, 19523625 - 19523527
Alignment:
Q  336 cagttttatcactagattactctggtgtgctcaaaatagaatgtcaagataggaaaccaatgatcatttacacttcacctcaacccaacaacaacactg 434  Q
    ||||| |||||||||| ||||||||||||||||||||||||| |||| ||||||||||||| ||||||||| ||||||||||||| | |||||||||||    
T  19523625 cagttctatcactagactactctggtgtgctcaaaatagaatctcaaaataggaaaccaataatcatttactcttcacctcaacctaccaacaacactg 19523527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 330 - 433
Target Start/End: Original strand, 19448135 - 19448238
Alignment:
Q  330 attcaacagttttatcactagattactctggtgtgctcaaaatagaatgtcaagataggaaaccaatgatcatttacacttcacctcaacccaacaacaa 429  Q
    ||||| ||||| ||||||||||||| ||||||||||||||||||||||  ||| ||||||||||||| ||||||||| |||||||||||||||  |||||    
T  19448135 attcagcagttctatcactagattattctggtgtgctcaaaatagaatcacaaaataggaaaccaataatcatttactcttcacctcaacccataaacaa 19448234  T
Q  430 cact 433  Q
    ||||    
T  19448235 cact 19448238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 330 - 433
Target Start/End: Complemental strand, 19532941 - 19532838
Alignment:
Q  330 attcaacagttttatcactagattactctggtgtgctcaaaatagaatgtcaagataggaaaccaatgatcatttacacttcacctcaacccaacaacaa 429  Q
    ||||| ||||| ||||||||||||| ||||||||||||||||||||||  ||| ||||||||||||| ||||||||| |||||||||||||||  |||||    
T  19532941 attcagcagttctatcactagattattctggtgtgctcaaaatagaatcacaaaataggaaaccaataatcatttactcttcacctcaacccataaacaa 19532842  T
Q  430 cact 433  Q
    ||||    
T  19532841 cact 19532838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 276 - 433
Target Start/End: Complemental strand, 19469108 - 19468957
Alignment:
Q  276 atggcacagtagtgtggttttatgatagaaatcacccctttgacttagaagaagattcaacagttttatcactagattactctggtgtgctcaaaataga 375  Q
    ||||||||||||||||| | ||||||| ||||||  || |||||||| |      |||| ||||| ||||| |||| |||||||||||||||||||||||    
T  19469108 atggcacagtagtgtggatgtatgatataaatcattccattgacttaaa------ttcagcagttctatcattagactactctggtgtgctcaaaataga 19469015  T
Q  376 atgtcaagataggaaaccaatgatcatttacacttcacctcaacccaacaacaacact 433  Q
    ||  ||| ||||||||||||| ||||||||| |||||||||||||||  |||||||||    
T  19469014 atcacaaaataggaaaccaataatcatttactcttcacctcaacccataaacaacact 19468957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 328 - 433
Target Start/End: Original strand, 19376236 - 19376341
Alignment:
Q  328 agattcaacagttttatcactagattactctggtgtgctcaaaatagaatgtcaagataggaaaccaatgatcatttacacttcacctcaacccaacaac 427  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||||||  ||| ||||||||||||| ||||||||| ||||||||||||| |  |||    
T  19376236 agattcagcagttctatcactagactactctggtgtgctcaaaatagaatcacaaaataggaaaccaataatcatttactcttcacctcaaccaataaac 19376335  T
Q  428 aacact 433  Q
    ||||||    
T  19376336 aacact 19376341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 330 - 433
Target Start/End: Complemental strand, 19555981 - 19555878
Alignment:
Q  330 attcaacagttttatcactagattactctggtgtgctcaaaatagaatgtcaagataggaaaccaatgatcatttacacttcacctcaacccaacaacaa 429  Q
    ||||| ||||| ||||| |||| |||||||||||||||||||||||||  ||| ||||||||||||| ||||||||| |||||||||||||||  |||||    
T  19555981 attcagcagttctatcattagactactctggtgtgctcaaaatagaatcacaaaataggaaaccaataatcatttactcttcacctcaacccataaacaa 19555882  T
Q  430 cact 433  Q
    ||||    
T  19555881 cact 19555878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 276 - 433
Target Start/End: Original strand, 19344742 - 19344893
Alignment:
Q  276 atggcacagtagtgtggttttatgatagaaatcacccctttgacttagaagaagattcaacagttttatcactagattactctggtgtgctcaaaataga 375  Q
    ||||| ||||||||||| | ||||||||||||||  || |||||||| |      |||| ||||| ||||||||||||| ||||||||||||||||||||    
T  19344742 atggcgcagtagtgtggatgtatgatagaaatcattccattgacttaaa------ttcagcagttctatcactagattattctggtgtgctcaaaataga 19344835  T
Q  376 atgtcaagataggaaaccaatgatcatttacacttcacctcaacccaacaacaacact 433  Q
    ||   || ||||||||||||| ||||||||| | |||||||||||||  |||||||||    
T  19344836 atcataaaataggaaaccaataatcatttactcgtcacctcaacccataaacaacact 19344893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 336 - 433
Target Start/End: Complemental strand, 19469993 - 19469893
Alignment:
Q  336 cagttttatcactagattactctggtgtgctcaaaatagaatgtcaagataggaa---accaatgatcatttacacttcacctcaacccaacaacaacac 432  Q
    ||||||||| |||||| ||||||||||||||||||||||||| |||| |||||||   |||||| ||||||||| ||||||||||||| | |||||||||    
T  19469993 cagttttattactagactactctggtgtgctcaaaatagaatctcaaaataggaaattaccaataatcatttactcttcacctcaacctaccaacaacac 19469894  T
Q  433 t 433  Q
    |    
T  19469893 t 19469893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 336 - 433
Target Start/End: Complemental strand, 19540917 - 19540817
Alignment:
Q  336 cagttttatcactagattactctggtgtgctcaaaatagaatgtcaagataggaa---accaatgatcatttacacttcacctcaacccaacaacaacac 432  Q
    ||||||||| |||||| ||||||||||||||||||||||||| |||| |||||||   |||||| ||||||||| ||||||||||||| | |||||||||    
T  19540917 cagttttattactagactactctggtgtgctcaaaatagaatctcaaaataggaaattaccaataatcatttactcttcacctcaacctaccaacaacac 19540818  T
Q  433 t 433  Q
    |    
T  19540817 t 19540817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 336 - 433
Target Start/End: Original strand, 19591781 - 19591881
Alignment:
Q  336 cagttttatcactagattactctggtgtgctcaaaatagaatgtcaagataggaa---accaatgatcatttacacttcacctcaacccaacaacaacac 432  Q
    ||||||||| |||||| ||||||||||||||||||||||||| |||| |||||||   |||||| ||||||||| ||||||||||||| | |||||||||    
T  19591781 cagttttattactagactactctggtgtgctcaaaatagaatctcaaaataggaaattaccaataatcatttactcttcacctcaacctaccaacaacac 19591880  T
Q  433 t 433  Q
    |    
T  19591881 t 19591881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 276 - 433
Target Start/End: Original strand, 19404321 - 19404472
Alignment:
Q  276 atggcacagtagtgtggttttatgatagaaatcacccctttgacttagaagaagattcaacagttttatcactagattactctggtgtgctcaaaataga 375  Q
    ||||| ||||||| ||| | ||||||||||||||  || ||||||||||      |||| ||||| |||| ||||| ||||| |||||||||||||||||    
T  19404321 atggcgcagtagtatggatgtatgatagaaatcattccattgacttaga------ttcagcagttctatcgctagactactccggtgtgctcaaaataga 19404414  T
Q  376 atgtcaagataggaaaccaatgatcatttacacttcacctcaacccaacaacaacact 433  Q
    ||  |||  |||||||||||| ||||||||  |||||||||||||||  |||||||||    
T  19404415 atcacaaagtaggaaaccaattatcatttattcttcacctcaacccataaacaacact 19404472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 330 - 422
Target Start/End: Complemental strand, 19468231 - 19468140
Alignment:
Q  330 attcaacagttttatcactagattactctggtgtgctcaaaatagaatgtcaagataggaaaccaatgatcatttacacttcacctcaaccca 422  Q
    ||||| ||||| ||||| |||| |||||||||||||||||||||||||  ||| || |||||||||| ||||||||| |||||||||||||||    
T  19468231 attcagcagttctatcattagactactctggtgtgctcaaaatagaatcacaaaat-ggaaaccaataatcatttactcttcacctcaaccca 19468140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 336 - 432
Target Start/End: Original strand, 19489728 - 19489824
Alignment:
Q  336 cagttttatcactagattactctggtgtgctcaaaatagaatgtcaagataggaaaccaatgatcatttacacttcacctcaacccaacaacaacac 432  Q
    |||||||||||||||  |||||||||| ||||||||||||||  ||| ||||||||||||| |||||||||   ||| ||||||||| |||||||||    
T  19489728 cagttttatcactagcctactctggtgcgctcaaaatagaatcacaaaataggaaaccaataatcatttacttgtcaactcaacccaccaacaacac 19489824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 276 - 422
Target Start/End: Complemental strand, 19173356 - 19173216
Alignment:
Q  276 atggcacagtagtgtggttttatgatagaaatcacccctttgacttagaagaagattcaacagttttatcactagattactctggtgtgctcaaaataga 375  Q
    ||||| ||||||||||| | ||||||||||||||  || |||||||| |      |||| ||||| | ||||||||||| |||||||||||||||||| |    
T  19173356 atggcgcagtagtgtggatgtatgatagaaatcattccattgacttaaa------ttcagcagttctttcactagattattctggtgtgctcaaaataca 19173263  T
Q  376 atgtcaagataggaaaccaatgatcatttacacttcacctcaaccca 422  Q
    ||  ||| ||||||||||||| ||||| | | |||||||||||||||    
T  19173262 atcacaaaataggaaaccaataatcatatgctcttcacctcaaccca 19173216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 342 - 434
Target Start/End: Complemental strand, 19504544 - 19504449
Alignment:
Q  342 tatcactagattactctggtgtgctcaaaatagaatgtcaagataggaa---accaatgatcatttacacttcacctcaacccaacaacaacactg 434  Q
    ||||| |||| ||||||||||||||||||||||||| |||| |||||||   |||||| ||||||||| |||| |||||||| | |||| ||||||    
T  19504544 tatcattagactactctggtgtgctcaaaatagaatttcaaaataggaatttaccaataatcatttactcttcgcctcaaccaaccaacgacactg 19504449  T

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Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 197 - 241
Target Start/End: Complemental strand, 19468385 - 19468341
Alignment:
Q  197 aattccaattccacgctatgttctaaacaaggcaagtattgtctt 241  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  19468385 aattccaattccacgctatgttctaaacaaggcaagttttgtctt 19468341  T

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Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 434
Target Start/End: Original strand, 19337069 - 19337178
Alignment:
Q  328 agattcaacagttttatcactagattactctggtgtgctcaaaatagaatgtcaagataggaa---accaatgatcatttacacttcacctcaacccaac 424  Q
    ||||||| ||||| |||||||||| ||||||||||| ||||||||||||| |||| |||||||   |||||| ||||||||   ||| |||||||| | |    
T  19337069 agattcagcagttctatcactagactactctggtgtactcaaaatagaatttcaaaataggaatgtaccaattatcatttattattcgcctcaaccaacc 19337168  T
Q  425 aacaacactg 434  Q
    ||| ||||||    
T  19337169 aacgacactg 19337178  T

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Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 276 - 390
Target Start/End: Original strand, 19355043 - 19355151
Alignment:
Q  276 atggcacagtagtgtggttttatgatagaaatcacccctttgacttagaagaagattcaacagttttatcactagattactctggtgtgctcaaaataga 375  Q
    ||||| ||||||||||| | |||||||||||||| ||| | ||| || |      |||| ||||| |||||||||| |||||||||||||||||||||||    
T  19355043 atggcccagtagtgtggatgtatgatagaaatcaacccatagacatata------ttcagcagttctatcactagactactctggtgtgctcaaaataga 19355136  T
Q  376 atgtcaagataggaa 390  Q
    || |||| |||||||    
T  19355137 atttcaaaataggaa 19355151  T

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Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 330 - 377
Target Start/End: Original strand, 19185068 - 19185115
Alignment:
Q  330 attcaacagttttatcactagattactctggtgtgctcaaaatagaat 377  Q
    ||||| ||||| |||||||||| |||||||||||||||||||||||||    
T  19185068 attcagcagttctatcactagactactctggtgtgctcaaaatagaat 19185115  T

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Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 336 - 391
Target Start/End: Original strand, 19287338 - 19287393
Alignment:
Q  336 cagttttatcactagattactctggtgtgctcaaaatagaatgtcaagataggaaa 391  Q
    ||||| ||||| |||| ||||||||||||||||||||||||| |||| ||||||||    
T  19287338 cagttctatcattagactactctggtgtgctcaaaatagaatctcaaaataggaaa 19287393  T

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Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 19469217 - 19469168
Alignment:
Q  197 aattccaattccacgctatgttctaaacaaggcaagtattgtcttgaatt 246  Q
    |||||||| |||| ||||||||||||||||||||||| ||||||| ||||    
T  19469217 aattccaaatccaagctatgttctaaacaaggcaagttttgtcttcaatt 19469168  T

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Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 377
Target Start/End: Original strand, 16004306 - 16004341
Alignment:
Q  342 tatcactagattactctggtgtgctcaaaatagaat 377  Q
    |||||||||| |||||||||||||||||||||||||    
T  16004306 tatcactagactactctggtgtgctcaaaatagaat 16004341  T

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Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 377
Target Start/End: Complemental strand, 19458303 - 19458256
Alignment:
Q  330 attcaacagttttatcactagattactctggtgtgctcaaaatagaat 377  Q
    ||||| ||||| ||||| |||| |||||||||||||||||||||||||    
T  19458303 attcagcagttctatcattagactactctggtgtgctcaaaatagaat 19458256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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