View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8109_low_1 (Length: 614)

Name: NF8109_low_1
Description: NF8109
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8109_low_1
NF8109_low_1
[»] chr8 (8 HSPs)
chr8 (18-614)||(30524954-30525581)
chr8 (80-149)||(12704268-12704336)
chr8 (79-179)||(42160411-42160518)
chr8 (96-154)||(31599882-31599940)
chr8 (79-194)||(32879692-32879808)
chr8 (80-151)||(28883655-28883726)
chr8 (85-154)||(42160219-42160288)
chr8 (78-126)||(42160533-42160581)
[»] chr3 (15 HSPs)
chr3 (101-287)||(50197019-50197207)
chr3 (80-194)||(50196862-50196976)
chr3 (80-177)||(30130781-30130878)
chr3 (80-179)||(11047475-11047574)
chr3 (80-149)||(30135501-30135570)
chr3 (80-149)||(30141630-30141699)
chr3 (80-149)||(30145052-30145121)
chr3 (198-287)||(22312338-22312427)
chr3 (80-154)||(20490919-20490994)
chr3 (198-309)||(20490965-20491076)
chr3 (79-154)||(36236556-36236630)
chr3 (79-119)||(20491166-20491206)
chr3 (80-126)||(30134105-30134151)
chr3 (372-405)||(22312207-22312240)
chr3 (269-310)||(47446128-47446169)
[»] chr7 (14 HSPs)
chr7 (79-195)||(2911951-2912068)
chr7 (80-195)||(8745861-8745977)
chr7 (198-316)||(8745779-8745897)
chr7 (79-195)||(8745644-8745761)
chr7 (317-405)||(5473277-5473365)
chr7 (80-123)||(35035414-35035457)
chr7 (72-154)||(27982023-27982104)
chr7 (270-316)||(36496221-36496267)
chr7 (258-339)||(33804305-33804390)
chr7 (96-147)||(23972471-23972522)
chr7 (89-152)||(41243211-41243274)
chr7 (88-149)||(5473345-5473406)
chr7 (244-316)||(35035378-35035450)
chr7 (269-321)||(48113867-48113919)
[»] chr4 (20 HSPs)
chr4 (80-195)||(23564548-23564664)
chr4 (91-313)||(55240471-55240695)
chr4 (83-154)||(36165455-36165526)
chr4 (250-313)||(54137260-54137323)
chr4 (82-154)||(36165883-36165955)
chr4 (79-152)||(1460461-1460535)
chr4 (78-154)||(23564270-23564346)
chr4 (198-315)||(36165366-36165487)
chr4 (80-154)||(9928965-9929040)
chr4 (80-147)||(18523008-18523075)
chr4 (80-154)||(8837034-8837107)
chr4 (83-149)||(44019602-44019668)
chr4 (92-149)||(19680331-19680388)
chr4 (370-405)||(1460397-1460432)
chr4 (96-179)||(9928763-9928846)
chr4 (92-147)||(18523215-18523270)
chr4 (128-158)||(36165718-36165748)
chr4 (80-154)||(41389426-41389500)
chr4 (122-154)||(11785033-11785065)
chr4 (198-230)||(34542325-34542357)
[»] chr2 (4 HSPs)
chr2 (164-313)||(36201953-36202104)
chr2 (80-316)||(43829597-43829847)
chr2 (81-147)||(30841544-30841610)
chr2 (95-154)||(43829826-43829885)
[»] chr1 (14 HSPs)
chr1 (96-191)||(25685697-25685793)
chr1 (79-154)||(3371647-3371722)
chr1 (80-154)||(10645794-10645868)
chr1 (96-179)||(49292989-49293072)
chr1 (97-147)||(12178099-12178149)
chr1 (80-195)||(10645557-10645673)
chr1 (83-126)||(10514951-10514994)
chr1 (370-405)||(30602341-30602376)
chr1 (80-154)||(3142940-3143014)
chr1 (198-316)||(49293052-49293170)
chr1 (78-179)||(44118212-44118312)
chr1 (274-310)||(10199982-10200018)
chr1 (250-286)||(15265528-15265564)
chr1 (131-179)||(35689906-35689954)
[»] chr5 (7 HSPs)
chr5 (96-208)||(6423929-6424044)
chr5 (91-152)||(8402133-8402194)
chr5 (80-152)||(8401993-8402065)
chr5 (96-316)||(42042143-42042365)
chr5 (247-316)||(33408150-33408219)
chr5 (80-192)||(28431955-28432068)
chr5 (80-120)||(33408183-33408223)
[»] chr6 (7 HSPs)
chr6 (80-191)||(10742214-10742327)
chr6 (259-316)||(32406985-32407042)
chr6 (115-154)||(4899552-4899591)
chr6 (251-309)||(12425734-12425792)
chr6 (80-117)||(32407006-32407043)
chr6 (80-150)||(33104647-33104719)
chr6 (80-152)||(27134159-27134231)
[»] scaffold0236 (1 HSPs)
scaffold0236 (92-151)||(22411-22470)
[»] scaffold1432 (1 HSPs)
scaffold1432 (96-154)||(949-1007)
[»] scaffold0557 (1 HSPs)
scaffold0557 (78-154)||(3907-3983)
[»] scaffold0442 (2 HSPs)
scaffold0442 (78-154)||(1530-1606)
scaffold0442 (78-154)||(7645-7721)


Alignment Details
Target: chr8 (Bit Score: 440; Significance: 0; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 440; E-Value: 0
Query Start/End: Original strand, 18 - 614
Target Start/End: Complemental strand, 30525581 - 30524954
Alignment:
Q  18 aattggacactcgaatgtcttttgtaagcacgctccttgaagaagatgcatctattcctacttgttaaatg----------ggtttggatctcatcccaa 107  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||          |||||||||||||||| ||    
T  30525581 aattggacactcaaatgtcttttgtaagcacgctccttgaagaagatgcatctactcctacttgttaaatgagtttaaatgggtttggatctcatccaaa 30525482  T
Q  108 aaggtagctcaaaagatgaaggtactcaaacatatttatacactcaatagctcaggaatctgaacaatgtggacaaataacaaactacgacaacttcaa- 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  30525481 aaggtagctcaaaagatgaaggtactcaaacatatttatacactcaatagctcaggaacctgaacaatgtggacaaataacaaactacgacaacttcaaa 30525382  T
Q  207 -----------cacccactctcatgtctagcgtggacttgagtccagcttccatattgcaatccttaacttgactctgataccatgttaaatgtgcttgt 295  Q
               |||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  30525381 acgaacttcatcacctactctcacgtctagcgtggacttgggtccagcttccatattgcaatccttaactcgactctgataccatgttaaatgtgcttgt 30525282  T
Q  296 atctcatcccaaaagctagct------------gtactcaaacatatttatacactaaacagcactagaacctaaacaatatagagcaaataacaaacta 383  Q
    |||||||||||||||||||||            |||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||    
T  30525281 atctcatcccaaaagctagctcaaagaatgagagtactcaaacatatttatacactaaacaacactagaacctaaataatgtagagcaaataacaaacta 30525182  T
Q  384 caaactacttcaaaaccaacttaacattactcactaacaaaagtcggaggagaacatgagatgctcaagaggtaaaccccgtccattcatacaacaacac 483  Q
    ||||| ||||||||| ||||||||||||||| |||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  30525181 caaacaacttcaaaagcaacttaacattactgactaacaaaagtcggag---aacatgagatgctcaagaggtaaaccccgtccattcatacaacaacac 30525085  T
Q  484 aaaatcacacaaattgtatcacaagtggttaggtcaattcatataccccctccaaacatatgcccaattatttctatttgtcttcccttcaactgtacac 583  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30525084 aaaatcacacaaattgtatcacaagtggttaggtcaattcatataccccatccaaacatatgcccaattatttctatttgtcttcccttcaactgtacac 30524985  T
Q  584 gtcttccccacacagaaaacagaaacatccg 614  Q
    |||||||||||||||||||||||||||||||    
T  30524984 gtcttccccacacagaaaacagaaacatccg 30524954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 80 - 149
Target Start/End: Complemental strand, 12704336 - 12704268
Alignment:
Q  80 tgttaaatgggtttggatctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttataca 149  Q
    |||||||| ||||||||||| |||| ||||| |||| |||||||||||||||||||||||||||||||||    
T  12704336 tgttaaataggtttggatcttatcc-aaaagctagcacaaaagatgaaggtactcaaacatatttataca 12704268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 79 - 179
Target Start/End: Complemental strand, 42160518 - 42160411
Alignment:
Q  79 ttgttaaatgggtttggatctcatcccaaaaggtagctcaaaaga-tgaag------gtactcaaacatatttatacactcaatagctcaggaatctgaa 171  Q
    |||||||||| ||||||||||||||||||||| |||||||||||| |||||      ||||||||||||||||||| |||||| | | | ||||  ||||    
T  42160518 ttgttaaatgagtttggatctcatcccaaaagttagctcaaaagattgaagatggatgtactcaaacatatttatatactcaacatcacgggaacttgaa 42160419  T
Q  172 caatgtgg 179  Q
    ||||||||    
T  42160418 caatgtgg 42160411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 154
Target Start/End: Complemental strand, 31599940 - 31599882
Alignment:
Q  96 atctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttatacactcaa 154  Q
    |||||| |||||||  ||||||||| |||||| ||||||||||||||||||||| ||||    
T  31599940 atctcaccccaaaaattagctcaaaggatgaaagtactcaaacatatttatacattcaa 31599882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 79 - 194
Target Start/End: Original strand, 32879692 - 32879808
Alignment:
Q  79 ttgttaaatgggtttggatctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttatacactcaatagctcaggaatctgaacaatgtg 178  Q
    ||||||||| |  ||| ||||||||||||||  || || ||| ||||| ||||||| |||||||||| |||||  | | | || ||| ||||||||||||    
T  32879692 ttgttaaatagtcttgaatctcatcccaaaaactaacttaaaggatgagggtactcgaacatatttaaacacttgacatcccatgaacctgaacaatgtg 32879791  T
Q  179 -gacaaataacaaacta 194  Q
     ||||||||||||||||    
T  32879792 agacaaataacaaacta 32879808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 151
Target Start/End: Original strand, 28883655 - 28883726
Alignment:
Q  80 tgttaaatgggtttggatctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttatacact 151  Q
    |||| ||| ||||||||||||||| |||||| || |||  |  |||| ||||||||||||||||||||||||    
T  28883655 tgttgaataggtttggatctcatctcaaaagctacctcggagaatgagggtactcaaacatatttatacact 28883726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 154
Target Start/End: Complemental strand, 42160288 - 42160219
Alignment:
Q  85 aatgggtttggatctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttatacactcaa 154  Q
    |||| |||||||| |||||| ||||  ||||||||||||| |   |||||| ||||||||||||||||||    
T  42160288 aatgagtttggatttcatcctaaaatttagctcaaaagataagtatactcagacatatttatacactcaa 42160219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 42160581 - 42160533
Alignment:
Q  78 cttgttaaatgggtttggatctcatcccaaaaggtagctcaaaagatga 126  Q
    ||||||||||  ||||||||||||||| ||||| |||||| ||||||||    
T  42160581 cttgttaaataagtttggatctcatcctaaaagttagctcgaaagatga 42160533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 2e-23; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 101 - 287
Target Start/End: Complemental strand, 50197207 - 50197019
Alignment:
Q  101 atcccaaaaggtagctcaaaagatgaaggtactcaaacatatttatacactcaatagctcaggaatctgaacaatgt-ggacaaataacaaacta-cgac 198  Q
    |||||||||| ||| ||||| ||||| ||||||| | ||||||||||||||||| || ||  ||| |||| |||||| |||||||||||||||||   ||    
T  50197207 atcccaaaagctagatcaaaggatgagggtactcgaccatatttatacactcaacagttcgtgaacctgagcaatgtgggacaaataacaaactataaac 50197108  T
Q  199 aacttcaacacccactctcatgtctagcgtggacttgagtccagcttccatattgcaatccttaacttgactctgataccatgttaaat 287  Q
    ||||||||||||||||||||   |||| ||||   | ||||||  ||||| ||||||||||||||   |||| ||||||||||||||||    
T  50197107 aacttcaacacccactctcacccctagtgtgggtctaagtccaatttccacattgcaatccttaatccgactatgataccatgttaaat 50197019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 80 - 194
Target Start/End: Complemental strand, 50196976 - 50196862
Alignment:
Q  80 tgttaaatgggtttggatctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttatacactcaatagctcaggaatctgaacaatgtgg 179  Q
    |||||||| |||||||||||||||||||||| ||||||||| ||||| |||| | |||||||||||||||||||| ||  | | ||  ||| ||||||||    
T  50196976 tgttaaataggtttggatctcatcccaaaagttagctcaaaggatgagggtatttaaacatatttatacactcaacagtacggaaacatgagcaatgtgg 50196877  T
Q  180 acaaataacaaacta 194  Q
    ||||||| |||||||    
T  50196876 acaaatatcaaacta 50196862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 80 - 177
Target Start/End: Original strand, 30130781 - 30130878
Alignment:
Q  80 tgttaaatgggtttggatctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttatacactcaatagctcaggaatctgaacaatgt 177  Q
    |||||||| |||||||||||||||||||||  ||||||||| ||||||| ||||||| ||||||||||||||||| ||| || ||| |||| ||||||    
T  30130781 tgttaaataggtttggatctcatcccaaaaactagctcaaatgatgaagatactcaagcatatttatacactcaacagcccaagaacctgagcaatgt 30130878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 80 - 179
Target Start/End: Complemental strand, 11047574 - 11047475
Alignment:
Q  80 tgttaaatgggtttggatctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttatacactcaatagctcaggaatctgaacaatgtgg 179  Q
    ||||||||||||||||||||||||  ||||| ||||||||| ||||| ||||||||| | ||||||||||||||| ||| ||  || |||| ||||||||    
T  11047574 tgttaaatgggtttggatctcatcataaaagttagctcaaaggatgagggtactcaagcgtatttatacactcaacagcgcacaaacctgagcaatgtgg 11047475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 80 - 149
Target Start/End: Original strand, 30135501 - 30135570
Alignment:
Q  80 tgttaaatgggtttggatctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttataca 149  Q
    |||||||| || ||||||||||||||||||| ||||||||| ||||| ||||||||| ||||||||||||    
T  30135501 tgttaaataggcttggatctcatcccaaaagttagctcaaatgatgagggtactcaagcatatttataca 30135570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 80 - 149
Target Start/End: Original strand, 30141630 - 30141699
Alignment:
Q  80 tgttaaatgggtttggatctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttataca 149  Q
    |||||||| || ||||||||||||||||||| ||||||||| ||||| ||||||||| ||||||||||||    
T  30141630 tgttaaataggcttggatctcatcccaaaagttagctcaaatgatgagggtactcaagcatatttataca 30141699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 80 - 149
Target Start/End: Original strand, 30145052 - 30145121
Alignment:
Q  80 tgttaaatgggtttggatctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttataca 149  Q
    |||||||| || ||||||||||||||||||| ||||||||| ||||| ||||||||| ||||||||||||    
T  30145052 tgttaaataggcttggatctcatcccaaaagttagctcaaatgatgagggtactcaagcatatttataca 30145121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 198 - 287
Target Start/End: Complemental strand, 22312427 - 22312338
Alignment:
Q  198 caacttcaacacccactctcatgtctagcgtggacttgagtccagcttccatattgcaatccttaacttgactctgataccatgttaaat 287  Q
    |||||||||||| ||||| || ||||||||||||  ||||||||  || || ||||||||| |||||  |||||||||||||||||||||    
T  22312427 caacttcaacactcactcacacgtctagcgtggatctgagtccaatttgcacattgcaatctttaacccgactctgataccatgttaaat 22312338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 20490994 - 20490919
Alignment:
Q  80 tgttaaatgggtttggatctcatcccaaaagg-tagctcaaaagatgaaggtactcaaacatatttatacactcaa 154  Q
    ||||||||| | |||||||||||||||||| | |||||||||||| || |||||||||  ||||||||||||||||    
T  20490994 tgttaaatgagcttggatctcatcccaaaaagctagctcaaaagacgagggtactcaagtatatttatacactcaa 20490919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 198 - 309
Target Start/End: Complemental strand, 20491076 - 20490965
Alignment:
Q  198 caacttcaacacccactctcatgtctagcgtggacttgagtccagcttccatattgcaatccttaacttgactctgataccatgttaaatgtgcttgtat 297  Q
    ||||||||| |||||| |||| |||||| |||| | ||  ||||  | ||| |||| |||| ||||| || |||||||||||||||||||| ||||| ||    
T  20491076 caacttcaatacccaccctcacgtctagtgtgggcctggatccaattcccacattgtaatcattaacctggctctgataccatgttaaatgagcttggat 20490977  T
Q  298 ctcatcccaaaa 309  Q
    ||||||||||||    
T  20490976 ctcatcccaaaa 20490965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 154
Target Start/End: Original strand, 36236556 - 36236630
Alignment:
Q  79 ttgttaaatgggtttggatctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttatacactcaa 154  Q
    |||| |||||||||||||| |||||||||||| || |||||| |||| |||| |||||||||||||||||| ||||    
T  36236556 ttgtgaaatgggtttggatgtcatcccaaaagataactcaaatgatg-aggtgctcaaacatatttatacattcaa 36236630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 20491206 - 20491166
Alignment:
Q  79 ttgttaaatgggtttggatctcatcccaaaaggtagctcaa 119  Q
    |||||||||| | ||||||||||||||||||||||||||||    
T  20491206 ttgttaaatgagcttggatctcatcccaaaaggtagctcaa 20491166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 80 - 126
Target Start/End: Original strand, 30134105 - 30134151
Alignment:
Q  80 tgttaaatgggtttggatctcatcccaaaaggtagctcaaaagatga 126  Q
    |||||||| || ||||||||||||||||||| ||||||||| |||||    
T  30134105 tgttaaataggcttggatctcatcccaaaagttagctcaaatgatga 30134151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 405
Target Start/End: Complemental strand, 22312240 - 22312207
Alignment:
Q  372 aataacaaactacaaactacttcaaaaccaactt 405  Q
    ||||||||||||||||| ||||||||||||||||    
T  22312240 aataacaaactacaaacaacttcaaaaccaactt 22312207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 310
Target Start/End: Complemental strand, 47446169 - 47446128
Alignment:
Q  269 ctctgataccatgttaaatgtgcttgtatctcatcccaaaag 310  Q
    ||||||||||||||||| || ||||| |||||||||||||||    
T  47446169 ctctgataccatgttaattgggcttggatctcatcccaaaag 47446128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 1e-21; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 79 - 195
Target Start/End: Original strand, 2911951 - 2912068
Alignment:
Q  79 ttgttaaatgggtttggatctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttatacactcaatagctcaggaatctgaacaatgt- 177  Q
    |||||||||  ||||  |||||||||||||   || |||||| |||||||||| |||||||||||||||||||||||||| |||||| |||| | ||||     
T  2911951 ttgttaaataagtttaaatctcatcccaaaccctaactcaaatgatgaaggtattcaaacatatttatacactcaatagcccaggaacctgatccatgtg 2912050  T
Q  178 ggacaaataacaaactac 195  Q
    ||||||||||||||||||    
T  2912051 ggacaaataacaaactac 2912068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 80 - 195
Target Start/End: Original strand, 8745861 - 8745977
Alignment:
Q  80 tgttaaatgggtttggatctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttatacactcaatagctcaggaatctgaacaatgt-g 178  Q
    ||||||||| | ||||||||||||||||||| ||||| ||| ||||| | ||||| ||||||||||||||||||| ||  | |||| ||| ||||||| |    
T  8745861 tgttaaatgagcttggatctcatcccaaaagttagcttaaaggatgaggatactcgaacatatttatacactcaacagtccgggaacctgtacaatgtag 8745960  T
Q  179 gacaaataacaaactac 195  Q
    |||| ||||||||||||    
T  8745961 gacacataacaaactac 8745977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 198 - 316
Target Start/End: Original strand, 8745779 - 8745897
Alignment:
Q  198 caacttcaacacccactctcatgtctagcgtggacttgagtccagcttccatattgcaatccttaacttgactctgataccatgttaaatgtgcttgtat 297  Q
    |||||| ||||| ||| |||||| ||||||||| | ||||||||  |  |||| || ||||||||||   ||||||||| ||||||||||| ||||| ||    
T  8745779 caactttaacactcaccctcatgcctagcgtggccctgagtccaattcacatactggaatccttaacccaactctgatatcatgttaaatgagcttggat 8745878  T
Q  298 ctcatcccaaaagctagct 316  Q
    ||||||||||||| |||||    
T  8745879 ctcatcccaaaagttagct 8745897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 79 - 195
Target Start/End: Original strand, 8745644 - 8745761
Alignment:
Q  79 ttgttaaatgggtttggatctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttatacactcaatagctcaggaatctgaacaatgt- 177  Q
    |||||||||| |||||||||||| || ||||| ||||| ||| || || |||||||||  ||||||| ||||||||||||  |||||  |||  |||||     
T  8745644 ttgttaaatgagtttggatctcaccctaaaagttagcttaaaggacgagggtactcaacaatatttagacactcaatagcctaggaacatgagtaatgta 8745743  T
Q  178 ggacaaataacaaactac 195  Q
    ||| ||||||||||||||    
T  8745744 ggaaaaataacaaactac 8745761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 317 - 405
Target Start/End: Complemental strand, 5473365 - 5473277
Alignment:
Q  317 gtactcaaacatatttatacactaaacagcactagaacctaaacaatatagagcaaataacaaactacaaactacttcaaaaccaactt 405  Q
    ||||||| ||||||||||||| | | || | | ||||| | | ||||||| | ||||||||||||||||||| ||||||||||||||||    
T  5473365 gtactcatacatatttatacatttagcaacccgagaacttgagcaatatataacaaataacaaactacaaacaacttcaaaaccaactt 5473277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 80 - 123
Target Start/End: Original strand, 35035414 - 35035457
Alignment:
Q  80 tgttaaatgggtttggatctcatcccaaaaggtagctcaaaaga 123  Q
    |||| |||||||||||||||||||||||||| ||||||||||||    
T  35035414 tgttcaatgggtttggatctcatcccaaaagctagctcaaaaga 35035457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 154
Target Start/End: Original strand, 27982023 - 27982104
Alignment:
Q  72 ttcctacttgttaaatgggtttggatctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttatacactcaa 154  Q
    |||||| ||||||||| || ||| ||||||||||||||  |  || ||||||| |||||||||||||||||||||||| ||||    
T  27982023 ttcctatttgttaaataggcttgaatctcatcccaaaatttgtct-aaaagataaaggtactcaaacatatttatacaatcaa 27982104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 316
Target Start/End: Original strand, 36496221 - 36496267
Alignment:
Q  270 tctgataccatgttaaatgtgcttgtatctcatcccaaaagctagct 316  Q
    ||||||||||||| ||||| ||||| |||||||||||||||||||||    
T  36496221 tctgataccatgtgaaatgggcttgaatctcatcccaaaagctagct 36496267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 258 - 339
Target Start/End: Original strand, 33804305 - 33804390
Alignment:
Q  258 ccttaacttgactctgataccatgttaaatgtgcttgtatctcatcccaaaagctagctg----tactcaaacatatttatacact 339  Q
    ||||||||  ||||||||||||||||||||  || || ||||||||||||||| ||| ||    ||||||| ||||||||||||||    
T  33804305 ccttaactcaactctgataccatgttaaataggcatgaatctcatcccaaaagttagttgatgatactcaatcatatttatacact 33804390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 23972522 - 23972471
Alignment:
Q  96 atctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttata 147  Q
    ||||||| ||||||| || |||||| ||||| ||||||||||||||||||||    
T  23972522 atctcattccaaaagttaactcaaaggatgagggtactcaaacatatttata 23972471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 152
Target Start/End: Original strand, 41243211 - 41243274
Alignment:
Q  89 ggtttggatctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttatacactc 152  Q
    |||||||||||||||||||||| ||||||||  ||||| | |||||||  ||||||||| ||||    
T  41243211 ggtttggatctcatcccaaaagttagctcaacggatgaggttactcaagtatatttatagactc 41243274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 149
Target Start/End: Complemental strand, 5473406 - 5473345
Alignment:
Q  88 gggtttggatctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttataca 149  Q
    ||||||||||||||| | ||||| || || ||||||| | |||||||| |||||||||||||    
T  5473406 gggtttggatctcattctaaaagctaacttaaaagataagggtactcatacatatttataca 5473345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 244 - 316
Target Start/End: Original strand, 35035378 - 35035450
Alignment:
Q  244 ttccatattgcaatccttaacttgactctgataccatgttaaatgtgcttgtatctcatcccaaaagctagct 316  Q
    ||||| |||||| || ||||| |  ||||||||| ||||| |||| | ||| |||||||||||||||||||||    
T  35035378 ttccacattgcattctttaacctagctctgatactatgttcaatgggtttggatctcatcccaaaagctagct 35035450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 269 - 321
Target Start/End: Complemental strand, 48113919 - 48113867
Alignment:
Q  269 ctctgataccatgttaaatgtgcttgtatctcatcccaaaagctagctgtact 321  Q
    ||||||||||||| | |||| ||||| |||||||||||||||| |||| ||||    
T  48113919 ctctgataccatggtgaatgggcttggatctcatcccaaaagccagctctact 48113867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 4e-21; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 80 - 195
Target Start/End: Original strand, 23564548 - 23564664
Alignment:
Q  80 tgttaaatgggtttggatctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttatacactcaatagctcaggaatctgaacaatgt-g 178  Q
    |||||||| |||||||||||||||||||||| ||||||||| ||||| ||||||||| |||| ||  |||||||||||  | |||| ||| |||||||      
T  23564548 tgttaaataggtttggatctcatcccaaaagttagctcaaaggatgagggtactcaagcatacttgcacactcaatagtccgggaacctggacaatgtaa 23564647  T
Q  179 gacaaataacaaactac 195  Q
    |||||||||||||||||    
T  23564648 gacaaataacaaactac 23564664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 91 - 313
Target Start/End: Complemental strand, 55240695 - 55240471
Alignment:
Q  91 tttggatctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttatacactcaatagctcaggaatc-tgaacaatgtg-gacaaataac 188  Q
    |||||||||||||||||||| | ||||||||||||| ||||||||| |||||||||| |||||| | | | | || | ||| ||||  |  || || |||    
T  55240695 tttggatctcatcccaaaagctcgctcaaaagatgagggtactcaagcatatttatatactcaacatc-ctgaaaacttgagcaatacgaaactaacaac 55240597  T
Q  189 aaactac-gacaacttcaacacccactctcatgtctagcgtggacttgagtccagcttccatattgcaatccttaacttgactctgataccatgttaaat 287  Q
    |||||||  |||||||||||| |||| |||| |||||||  |  ||||||||||  | | | ||||||||| |||||  |||||| ||||||||||||||    
T  55240596 aaactacaaacaacttcaacatccaccctcacgtctagcaagagcttgagtccaattcctacattgcaatctttaacccgactctaataccatgttaaat 55240497  T
Q  288 gtgcttgtatctcatcccaaaagcta 313  Q
      ||||| ||||||||||||||||||    
T  55240496 tggcttgaatctcatcccaaaagcta 55240471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 83 - 154
Target Start/End: Original strand, 36165455 - 36165526
Alignment:
Q  83 taaatgggtttggatctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttatacactcaa 154  Q
    |||||||| ||||||||||||||||||  |||| |||||||||| ||||||||||||| |||||||||||||    
T  36165455 taaatgggcttggatctcatcccaaaatctagcacaaaagatgagggtactcaaacatctttatacactcaa 36165526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 250 - 313
Target Start/End: Original strand, 54137260 - 54137323
Alignment:
Q  250 attgcaatccttaacttgactctgataccatgttaaatgtgcttgtatctcatcccaaaagcta 313  Q
    |||||||||||||||  ||||||||||||||||||| || ||||| ||||||||||||||||||    
T  54137260 attgcaatccttaacccgactctgataccatgttaattgagcttgaatctcatcccaaaagcta 54137323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 82 - 154
Target Start/End: Original strand, 36165883 - 36165955
Alignment:
Q  82 ttaaatgggtttggatctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttatacactcaa 154  Q
    ||||||| |||||||||||||| |||||| ||||| ||| ||||| ||| ||||||||| |||||||||||||    
T  36165883 ttaaatgagtttggatctcatcgcaaaagttagcttaaaggatgagggtgctcaaacatgtttatacactcaa 36165955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 79 - 152
Target Start/End: Complemental strand, 1460535 - 1460461
Alignment:
Q  79 ttgttaaatgggtttggatctcatcccaaaaggtagctcaaaag-atgaaggtactcaaacatatttatacactc 152  Q
    |||||||||| | ||||||||||| ||||||  ||||||||| | ||||| ||||||||||||||||||||||||    
T  1460535 ttgttaaatgtgcttggatctcattccaaaaactagctcaaacgtatgaaagtactcaaacatatttatacactc 1460461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 23564270 - 23564346
Alignment:
Q  78 cttgttaaatgggtttggatctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttatacactcaa 154  Q
    |||||||||| |  ||||||||||||||||| | || || ||||||||||||| || ||||||| ||||||||||||    
T  23564270 cttgttaaattgacttggatctcatcccaaatgctaacttaaaagatgaaggttctaaaacatacttatacactcaa 23564346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 198 - 315
Target Start/End: Original strand, 36165366 - 36165487
Alignment:
Q  198 caacttcaacacccactctcatgtctagcgtggacttgagtccagctt----ccatattgcaatccttaacttgactctgataccatgttaaatgtgctt 293  Q
    |||||||||||||||| |||| | ||||||||| ||||||||||  |     ||| ||||||||||||||| ||  | || ||||||| |||||| ||||    
T  36165366 caacttcaacacccaccctcacgcctagcgtgggcttgagtccaattctgtcccacattgcaatccttaacctggttttgttaccatggtaaatgggctt 36165465  T
Q  294 gtatctcatcccaaaagctagc 315  Q
    | |||||||||||||| |||||    
T  36165466 ggatctcatcccaaaatctagc 36165487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 80 - 154
Target Start/End: Original strand, 9928965 - 9929040
Alignment:
Q  80 tgttaaatgggtttgga-tctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttatacactcaa 154  Q
    |||||||| || ||||| ||| || ||||||| ||||||||||||||| | |||||||||||||||||| ||||||    
T  9928965 tgttaaataggcttggaatcttattccaaaagttagctcaaaagatgaggatactcaaacatatttatatactcaa 9929040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 18523008 - 18523075
Alignment:
Q  80 tgttaaatgggtttggatctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttata 147  Q
    ||||||||| | ||||||||||| ||||||| | ||||||| ||||| ||||||||| ||||||||||    
T  18523008 tgttaaatgagcttggatctcataccaaaagctcgctcaaaggatgatggtactcaagcatatttata 18523075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 80 - 154
Target Start/End: Original strand, 8837034 - 8837107
Alignment:
Q  80 tgttaaatgggtttggatctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttatacactcaa 154  Q
    |||||||| |||||| |||||||||||||   |||||||||  |||| ||||||||||||||||| |||||||||    
T  8837034 tgttaaataggtttgaatctcatcccaaagtttagctcaaagaatgagggtactcaaacatattt-tacactcaa 8837107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 149
Target Start/End: Original strand, 44019602 - 44019668
Alignment:
Q  83 taaatgggtttggatctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttataca 149  Q
    |||||||| || |||||||||||||||| ||||||||| ||||| ||| | |||||| |||||||||    
T  44019602 taaatgggcttagatctcatcccaaaagttagctcaaaggatgagggtgcccaaacacatttataca 44019668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 92 - 149
Target Start/End: Original strand, 19680331 - 19680388
Alignment:
Q  92 ttggatctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttataca 149  Q
    |||||||| |||||||||| |||||||||||| || || |||||| ||||||||||||    
T  19680331 ttggatcttatcccaaaagttagctcaaaagaggaggggactcaagcatatttataca 19680388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 405
Target Start/End: Complemental strand, 1460432 - 1460397
Alignment:
Q  370 caaataacaaactacaaactacttcaaaaccaactt 405  Q
    ||||||||||||||||||| ||||||||||||||||    
T  1460432 caaataacaaactacaaacaacttcaaaaccaactt 1460397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 179
Target Start/End: Original strand, 9928763 - 9928846
Alignment:
Q  96 atctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttatacactcaatagctcaggaatctgaacaatgtgg 179  Q
    |||| |||||||||  ||||| |||| || | ||||||||||||||||||||||||||| | | | | ||||||| ||||||||    
T  9928763 atctaatcccaaaaattagcttaaaaaattagggtactcaaacatatttatacactcaacaacccggaaatctgagcaatgtgg 9928846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 92 - 147
Target Start/End: Original strand, 18523215 - 18523270
Alignment:
Q  92 ttggatctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttata 147  Q
    ||||||||  ||||||||| || |||||| ||||| ||||||||||||||||||||    
T  18523215 ttggatctgctcccaaaagatacctcaaaggatgagggtactcaaacatatttata 18523270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 128 - 158
Target Start/End: Original strand, 36165718 - 36165748
Alignment:
Q  128 ggtactcaaacatatttatacactcaatagc 158  Q
    |||||||||||||||||||||||||||||||    
T  36165718 ggtactcaaacatatttatacactcaatagc 36165748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 80 - 154
Target Start/End: Original strand, 41389426 - 41389500
Alignment:
Q  80 tgttaaatgggtttggatctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttatacactcaa 154  Q
    |||||||| |||||| |||| ||| |||||||||||||||| ||| | || ||| ||| ||||||||||| ||||    
T  41389426 tgttaaataggtttgaatctaatctcaaaaggtagctcaaaggataaggggactgaaatatatttatacattcaa 41389500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 11785065 - 11785033
Alignment:
Q  122 gatgaaggtactcaaacatatttatacactcaa 154  Q
    ||||| |||||||||||||||||||||||||||    
T  11785065 gatgagggtactcaaacatatttatacactcaa 11785033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 198 - 230
Target Start/End: Original strand, 34542325 - 34542357
Alignment:
Q  198 caacttcaacacccactctcatgtctagcgtgg 230  Q
    ||||||||||||||||||||||| |||||||||    
T  34542325 caacttcaacacccactctcatgcctagcgtgg 34542357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 2e-20; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 164 - 313
Target Start/End: Complemental strand, 36202104 - 36201953
Alignment:
Q  164 aatctgaacaatgtg-gacaaataacaaactacga-caacttcaacacccactctcatgtctagcgtggacttgagtccagcttccatattgcaatcctt 261  Q
    ||||||||||||||| || |||||||||||||| | ||| |||||||  |||||||| || || ||||  ||||||||||  ||||| |||| ||| |||    
T  36202104 aatctgaacaatgtgtgataaataacaaactacaaacaatttcaacattcactctcacgtttaacgtgagcttgagtccaatttccacattgtaattctt 36202005  T
Q  262 aacttgactctgataccatgttaaatgtgcttgtatctcatcccaaaagcta 313  Q
    |||  ||||||||||||||||||||  |||||| ||||| ||||||||||||    
T  36202004 aacccgactctgataccatgttaaacatgcttgaatctcctcccaaaagcta 36201953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 80 - 316
Target Start/End: Original strand, 43829597 - 43829847
Alignment:
Q  80 tgttaaatgggtttggatctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttatacactcaatagctcaggaatc-tgaacaatgtg 178  Q
    ||||||||| | |||||||| |||| ||||| |||||||||  |||| | ||||||||||||||||||||||||| ||  | |||||| |||||||||||    
T  43829597 tgttaaatgtgcttggatcttatcc-aaaagctagctcaaagaatgaggatactcaaacatatttatacactcaacagtccgggaatcctgaacaatgtg 43829695  T
Q  179 g-acaaataacaaactacga-------------caacttcaacacccactctcatgtctagcgtggacttgagtccagcttccatattgcaatccttaac 264  Q
    | || |  |||||||||| |             |||||||||||||||| |||| |||||  |||| | ||| |||| || ||| | |||||||||||||    
T  43829696 ggactagaaacaaactacaaggaacttcaaaaccaacttcaacacccaccctcacgtctaatgtgggcctgaatccaactcccacactgcaatccttaac 43829795  T
Q  265 ttgactctgataccatgttaaatgtgcttgtatctcatcccaaaagctagct 316  Q
      ||||||||||||||||| |||| ||||  |||||||||||| ||||||||    
T  43829796 ccgactctgataccatgtttaatgagctttgatctcatcccaacagctagct 43829847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 81 - 147
Target Start/End: Original strand, 30841544 - 30841610
Alignment:
Q  81 gttaaatgggtttggatctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttata 147  Q
    ||||||| |||||||||||||||||| ||| ||| | ||| ||||| | ||||||||||||||||||    
T  30841544 gttaaataggtttggatctcatcccacaagttagtttaaaggatgaggatactcaaacatatttata 30841610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 95 - 154
Target Start/End: Original strand, 43829826 - 43829885
Alignment:
Q  95 gatctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttatacactcaa 154  Q
    ||||||||||||| || ||||||||  ||||| ||||||||| ||||||| |||||||||    
T  43829826 gatctcatcccaacagctagctcaatggatgagggtactcaagcatatttctacactcaa 43829885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 1e-18; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 96 - 191
Target Start/End: Complemental strand, 25685793 - 25685697
Alignment:
Q  96 atctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttatacactcaatagctcaggaatctgaacaatgtg-gacaaataacaaa 191  Q
    |||| |||| ||||| ||||||||| |||||  ||| |||||||||||||||||||||| | ||||| ||||||||||||||| |||||||||||||    
T  25685793 atcttatcctaaaagctagctcaaatgatgagagtattcaaacatatttatacactcaacaactcagaaatctgaacaatgtgagacaaataacaaa 25685697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 154
Target Start/End: Complemental strand, 3371722 - 3371647
Alignment:
Q  79 ttgttaaatgggtttggatctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttatacactcaa 154  Q
    |||||||||| | ||||||||||||||||||| || |||||||||||| ||||||||| ||| | |||||||||||    
T  3371722 ttgttaaatgagcttggatctcatcccaaaagctacctcaaaagatgagggtactcaagcatgtgtatacactcaa 3371647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 10645868 - 10645794
Alignment:
Q  80 tgttaaatgggtttggatctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttatacactcaa 154  Q
    |||||||| ||||| |||||||||  ||||| |||||| || ||||| |||||||||||||||||||||||||||    
T  10645868 tgttaaataggttttgatctcatcttaaaagatagctctaaggatgagggtactcaaacatatttatacactcaa 10645794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 96 - 179
Target Start/End: Complemental strand, 49293072 - 49292989
Alignment:
Q  96 atctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttatacactcaatagctcaggaatctgaacaatgtgg 179  Q
    |||||||| |||||| ||||||||  || || |||| ||||| ||||||||||||||||||| |  ||||||||| ||||||||    
T  49293072 atctcatctcaaaagctagctcaagggacgagggtattcaaaaatatttatacactcaatagtttgggaatctgagcaatgtgg 49292989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 12178099 - 12178149
Alignment:
Q  97 tctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttata 147  Q
    |||||||||||||| ||| ||||| ||||| ||||||||||||||||||||    
T  12178099 tctcatcccaaaagctaggtcaaaggatgagggtactcaaacatatttata 12178149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 80 - 195
Target Start/End: Complemental strand, 10645673 - 10645557
Alignment:
Q  80 tgttaaatgggtttggatctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttatacactcaatagctcaggaatctgaacaatgt-g 178  Q
    |||||||| ||||| ||||||||||||| ||  | ||| ||  |||  ||||||||| ||||||||||||||||||| | | |||| |||| | |||| |    
T  10645673 tgttaaataggttttgatctcatcccaacagccaactctaagtatgggggtactcaagcatatttatacactcaataccgcgggaacctgagcgatgtgg 10645574  T
Q  179 gacaaataacaaactac 195  Q
    |||||| ||||||||||    
T  10645573 gacaaacaacaaactac 10645557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 126
Target Start/End: Complemental strand, 10514994 - 10514951
Alignment:
Q  83 taaatgggtttggatctcatcccaaaaggtagctcaaaagatga 126  Q
    |||||||||||||||||||||||||||| || |||||| |||||    
T  10514994 taaatgggtttggatctcatcccaaaagctacctcaaaggatga 10514951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 405
Target Start/End: Complemental strand, 30602376 - 30602341
Alignment:
Q  370 caaataacaaactacaaactacttcaaaaccaactt 405  Q
    ||||||||||||||||||| ||||||||||||||||    
T  30602376 caaataacaaactacaaacaacttcaaaaccaactt 30602341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 3143014 - 3142940
Alignment:
Q  80 tgttaaatgggtttggatctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttatacactcaa 154  Q
    ||||||||  |||||||| |||||||||||| || ||| ||  |||||||||||| | |||||||||||| ||||    
T  3143014 tgttaaataagtttggatgtcatcccaaaagctaactcgaagaatgaaggtactcgagcatatttatacattcaa 3142940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 198 - 316
Target Start/End: Complemental strand, 49293170 - 49293052
Alignment:
Q  198 caacttcaacacccactctcatgtctagcgtggacttgagtccagcttccatattgcaatccttaacttgactctgataccatgttaaatgtgcttgtat 297  Q
    |||||||||||| ||| |||| ||||| | |||  |||||||||  | ||| ||||| |||||||||  |||||| |||| | || |||| ||| || ||    
T  49293170 caacttcaacactcaccctcacgtctatcatgggtttgagtccaattcccacattgcgatccttaacccgactctaatacgacgtaaaatatgcctgaat 49293071  T
Q  298 ctcatcccaaaagctagct 316  Q
    |||||| ||||||||||||    
T  49293070 ctcatctcaaaagctagct 49293052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 179
Target Start/End: Original strand, 44118212 - 44118312
Alignment:
Q  78 cttgttaaatgggtttggatctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttatacactcaatagctcaggaatctgaacaatgt 177  Q
    |||||||||||   | |||||||||| |||||| ||||||||| |||| || |||||||||| || ||||| | ||| |||  ||| |||||||||||||    
T  44118212 cttgttaaatgaactcggatctcatctcaaaagctagctcaaatgatg-agatactcaaacacatatatacgcccaacagcctaggcatctgaacaatgt 44118310  T
Q  178 gg 179  Q
    ||    
T  44118311 gg 44118312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 274 - 310
Target Start/End: Complemental strand, 10200018 - 10199982
Alignment:
Q  274 ataccatgttaaatgtgcttgtatctcatcccaaaag 310  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  10200018 ataccatgttaaatgggcttgaatctcatcccaaaag 10199982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 250 - 286
Target Start/End: Complemental strand, 15265564 - 15265528
Alignment:
Q  250 attgcaatccttaacttgactctgataccatgttaaa 286  Q
    |||| |||||||||||| |||||||||||||||||||    
T  15265564 attgtaatccttaacttaactctgataccatgttaaa 15265528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 131 - 179
Target Start/End: Original strand, 35689906 - 35689954
Alignment:
Q  131 actcaaacatatttatacactcaatagctcaggaatctgaacaatgtgg 179  Q
    |||||||||||||||||||||||| ||| | | |||| |||||||||||    
T  35689906 actcaaacatatttatacactcaacagcccggaaatccgaacaatgtgg 35689954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 4e-18; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 96 - 208
Target Start/End: Complemental strand, 6424044 - 6423929
Alignment:
Q  96 atctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttatacactcaatagct-caggaatctgaacaatgtg-gacaaataacaaact 193  Q
    ||||||||| ||||  ||||| ||||||||| | ||||||||||||||||||||||||| ||||  || ||  ||||||||||| |||||||||||||||    
T  6424044 atctcatcctaaaaactagcttaaaagatgatgatactcaaacatatttatacactcaacagctggagaaacttgaacaatgtgagacaaataacaaact 6423945  T
Q  194 ac-gacaacttcaaca 208  Q
    || |||||||||||||    
T  6423944 acagacaacttcaaca 6423929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 152
Target Start/End: Original strand, 8402133 - 8402194
Alignment:
Q  91 tttggatctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttatacactc 152  Q
    ||||||| |||||||||||| ||||||||| || || |||||||||||||||||||||||||    
T  8402133 tttggatttcatcccaaaagttagctcaaaggaggagggtactcaaacatatttatacactc 8402194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 80 - 152
Target Start/End: Original strand, 8401993 - 8402065
Alignment:
Q  80 tgttaaatgggtttggatctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttatacactc 152  Q
    ||||||||  ||||||||||||| ||||||| ||||||||| || || ||||||||| |||||||||||||||    
T  8401993 tgttaaataagtttggatctcattccaaaagttagctcaaaggaggagggtactcaagcatatttatacactc 8402065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 96 - 316
Target Start/End: Complemental strand, 42042365 - 42042143
Alignment:
Q  96 atctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttatacactcaatagctcaggaatctgaacaatgtg-gacaaataacaaacta 194  Q
    ||||||||| |||||   ||| ||| ||||||| ||||||||||||||||||||||||| ||    |||| ||   ||||||| ||| || |||||||||    
T  42042365 atctcatcctaaaagtgggcttaaatgatgaagatactcaaacatatttatacactcaacagtctgggaacctttgcaatgtgtgactaacaacaaacta 42042266  T
Q  195 cga-caacttcaacacccactctcatgtctagcgtggacttgagtccagcttccatattgcaatccttaacttgactctgataccatgttaaatgtgctt 293  Q
      | ||||||| |||||||| |||  |  |||||| | |||| | |||  | ||| || ||||||||||||  |||||||||||||||||||||  | ||    
T  42042265 taaacaacttcgacacccaccctcgcgcttagcgtaggcttgtgcccaattcccacatcgcaatccttaacccgactctgataccatgttaaataagttt 42042166  T
Q  294 gtatctcatcccaaaagctagct 316  Q
    | |||||||||||||| ||||||    
T  42042165 ggatctcatcccaaaaactagct 42042143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 247 - 316
Target Start/End: Original strand, 33408150 - 33408219
Alignment:
Q  247 catattgcaatccttaacttgactctgataccatgttaaatgtgcttgtatctcatcccaaaagctagct 316  Q
    |||||||||||| ||||   |||||||||||||||||||||| | ||| ||||||||||||||| |||||    
T  33408150 catattgcaatcattaaaccgactctgataccatgttaaatgagtttgaatctcatcccaaaagttagct 33408219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 80 - 192
Target Start/End: Original strand, 28431955 - 28432068
Alignment:
Q  80 tgttaaatgggtttggatctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttatacactcaatagctcaggaatctgaacaatgtg- 178  Q
    |||||||| || ||| || |||| ||||||| ||| | ||| ||||| | ||||||| ||||||||||||||||  ||| |||||| || | |||||||     
T  28431955 tgttaaataggcttgaatttcattccaaaagctagtttaaaggatgaggatactcaagcatatttatacactcagcagcccaggaacctaagcaatgtga 28432054  T
Q  179 gacaaataacaaac 192  Q
    ||||||||||||||    
T  28432055 gacaaataacaaac 28432068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 80 - 120
Target Start/End: Original strand, 33408183 - 33408223
Alignment:
Q  80 tgttaaatgggtttggatctcatcccaaaaggtagctcaaa 120  Q
    ||||||||| ||||| ||||||||||||||| |||||||||    
T  33408183 tgttaaatgagtttgaatctcatcccaaaagttagctcaaa 33408223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 191
Target Start/End: Complemental strand, 10742327 - 10742214
Alignment:
Q  80 tgttaaatgggtttggatctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttatacactcaatagctc-aggaatctgaacaatgt- 177  Q
    ||||||||| ||||||||||||||||||||| ||  ||||| ||| | ||||| |||||||||||||||| |||| | |||  |||| |||||||||||     
T  10742327 tgttaaatgtgtttggatctcatcccaaaagctaaatcaaatgattagggtacccaaacatatttatacattcaacaactcggggaacctgaacaatgtg 10742228  T
Q  178 ggacaaataacaaa 191  Q
    ||| ||||||||||    
T  10742227 ggataaataacaaa 10742214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 259 - 316
Target Start/End: Original strand, 32406985 - 32407042
Alignment:
Q  259 cttaacttgactctgataccatgttaaatgtgcttgtatctcatcccaaaagctagct 316  Q
    |||||| ||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  32406985 cttaacctgactctgataccatgttaaatgagtttggatctcatcccaaaagctagct 32407042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 154
Target Start/End: Original strand, 4899552 - 4899591
Alignment:
Q  115 ctcaaaagatgaaggtactcaaacatatttatacactcaa 154  Q
    ||||||||||||||||| ||||||||||||||||| ||||    
T  4899552 ctcaaaagatgaaggtattcaaacatatttatacattcaa 4899591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 251 - 309
Target Start/End: Complemental strand, 12425792 - 12425734
Alignment:
Q  251 ttgcaatccttaacttgactctgataccatgttaaatgtgcttgtatctcatcccaaaa 309  Q
    ||||||| || |||| |||||||||||||||||||||| | ||| |||||||| |||||    
T  12425792 ttgcaatactcaactcgactctgataccatgttaaatgggattgaatctcatcacaaaa 12425734  T

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Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 117
Target Start/End: Original strand, 32407006 - 32407043
Alignment:
Q  80 tgttaaatgggtttggatctcatcccaaaaggtagctc 117  Q
    ||||||||| ||||||||||||||||||||| ||||||    
T  32407006 tgttaaatgagtttggatctcatcccaaaagctagctc 32407043  T

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Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 150
Target Start/End: Complemental strand, 33104719 - 33104647
Alignment:
Q  80 tgttaaatgggtttggatctcatcccaaaaggtagctcaaa--agatgaaggtactcaaacatatttatacac 150  Q
    |||||||| |||||||||||||||||||||  ||| |||||   ||||| |||| |||| |||||||||||||    
T  33104719 tgttaaataggtttggatctcatcccaaaaattagatcaaattggatgagggtattcaagcatatttatacac 33104647  T

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Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 80 - 152
Target Start/End: Complemental strand, 27134231 - 27134159
Alignment:
Q  80 tgttaaatgggtttggatctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttatacactc 152  Q
    ||||||||| ||||| ||||||||| ||||| ||  | ||| |||||  ||| ||||||||||||||||||||    
T  27134231 tgttaaatgagtttgaatctcatcctaaaagctaagttaaaggatgagagtagtcaaacatatttatacactc 27134159  T

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Target: scaffold0236 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 92 - 151
Target Start/End: Complemental strand, 22470 - 22411
Alignment:
Q  92 ttggatctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttatacact 151  Q
    |||| |||||||||||||| ||  ||||| ||||||||||||||| ||||||||||||||    
T  22470 ttggttctcatcccaaaagctaattcaaaggatgaaggtactcaagcatatttatacact 22411  T

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Target: scaffold1432 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold1432
Description:

Target: scaffold1432; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 154
Target Start/End: Original strand, 949 - 1007
Alignment:
Q  96 atctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttatacactcaa 154  Q
    ||||||||||||||| |  |||||| ||||| | |||||||||||||||||||| ||||    
T  949 atctcatcccaaaagctcactcaaaggatgaggatactcaaacatatttatacattcaa 1007  T

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Target: scaffold0557 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 3907 - 3983
Alignment:
Q  78 cttgttaaatgggtttggatctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttatacactcaa 154  Q
    ||||| ||||||| ||| ||||||||  ||||| || || ||| ||||| ||||||||||||||||| |||| ||||    
T  3907 cttgtaaaatgggattgaatctcatcttaaaagttaacttaaaggatgagggtactcaaacatatttgtacattcaa 3983  T

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Target: scaffold0442 (Bit Score: 29; Significance: 0.0000009; HSPs: 2)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 1530 - 1606
Alignment:
Q  78 cttgttaaatgggtttggatctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttatacactcaa 154  Q
    ||||| ||||||| ||| ||||||||  ||||| || || ||| ||||| ||||||||||||||||| |||| ||||    
T  1530 cttgtaaaatgggattgaatctcatcttaaaagttaacttaaaggatgagggtactcaaacatatttgtacattcaa 1606  T

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Target: scaffold0442; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 7645 - 7721
Alignment:
Q  78 cttgttaaatgggtttggatctcatcccaaaaggtagctcaaaagatgaaggtactcaaacatatttatacactcaa 154  Q
    ||||| ||||||| ||| ||||||||  ||||| || || ||| ||||| ||||||||||||||||| |||| ||||    
T  7645 cttgtaaaatgggattgaatctcatcttaaaagttaacttaaaggatgagggtactcaaacatatttgtacattcaa 7721  T

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