View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8111_low_22 (Length: 251)

Name: NF8111_low_22
Description: NF8111
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8111_low_22
NF8111_low_22
[»] chr7 (89 HSPs)
chr7 (1-236)||(14593695-14593930)
chr7 (1-236)||(16013218-16013453)
chr7 (1-236)||(36514320-36514553)
chr7 (1-235)||(5335856-5336087)
chr7 (1-223)||(48736025-48736247)
chr7 (5-230)||(47848612-47848838)
chr7 (37-233)||(43282375-43282576)
chr7 (78-236)||(18605258-18605421)
chr7 (1-231)||(28628050-28628281)
chr7 (2-141)||(39906582-39906717)
chr7 (5-230)||(36136702-36136928)
chr7 (78-236)||(18637569-18637732)
chr7 (78-236)||(18651003-18651166)
chr7 (49-235)||(12966000-12966185)
chr7 (1-141)||(34869354-34869490)
chr7 (1-141)||(35906413-35906549)
chr7 (1-231)||(13859125-13859356)
chr7 (1-207)||(39811891-39812098)
chr7 (4-141)||(49029213-49029346)
chr7 (37-151)||(28858016-28858124)
chr7 (1-141)||(31005157-31005293)
chr7 (37-212)||(1740767-1740948)
chr7 (1-141)||(33072888-33073022)
chr7 (8-139)||(40139133-40139257)
chr7 (61-154)||(45558352-45558445)
chr7 (1-141)||(37617878-37618015)
chr7 (177-235)||(30814784-30814842)
chr7 (61-193)||(19262589-19262725)
chr7 (55-139)||(27021906-27021990)
chr7 (5-130)||(30200186-30200303)
chr7 (187-235)||(45601597-45601645)
chr7 (37-141)||(6374838-6374938)
chr7 (1-141)||(11593894-11594030)
chr7 (163-234)||(19119538-19119608)
chr7 (164-235)||(24549801-24549872)
chr7 (1-141)||(33350018-33350154)
chr7 (181-236)||(40830317-40830372)
chr7 (37-149)||(41948486-41948594)
chr7 (37-141)||(45836692-45836792)
chr7 (96-233)||(6420605-6420747)
chr7 (55-137)||(7189442-7189524)
chr7 (1-59)||(29653844-29653902)
chr7 (71-141)||(43491308-43491378)
chr7 (1-140)||(46356069-46356204)
chr7 (78-231)||(2885839-2885997)
chr7 (183-236)||(34745864-34745917)
chr7 (1-62)||(40008704-40008765)
chr7 (7-141)||(44855384-44855514)
chr7 (158-231)||(26742011-26742086)
chr7 (5-154)||(42187409-42187553)
chr7 (183-235)||(44401238-44401290)
chr7 (78-141)||(12841487-12841550)
chr7 (78-153)||(25579277-25579352)
chr7 (160-231)||(28562483-28562554)
chr7 (78-141)||(29650391-29650454)
chr7 (1-141)||(38606939-38607074)
chr7 (37-141)||(46014393-46014492)
chr7 (78-140)||(7220751-7220813)
chr7 (78-144)||(7273046-7273112)
chr7 (82-140)||(35713706-35713764)
chr7 (89-232)||(38135329-38135476)
chr7 (78-136)||(38920801-38920859)
chr7 (189-231)||(40980045-40980087)
chr7 (177-235)||(42177131-42177189)
chr7 (158-231)||(1011139-1011212)
chr7 (199-232)||(21517496-21517529)
chr7 (41-139)||(28020938-28021032)
chr7 (158-234)||(28359349-28359426)
chr7 (79-140)||(30914681-30914742)
chr7 (78-143)||(40830230-40830295)
chr7 (1-141)||(43281610-43281744)
chr7 (177-233)||(32368452-32368508)
chr7 (37-141)||(35559205-35559306)
chr7 (11-130)||(47796359-47796476)
chr7 (78-141)||(22349627-22349690)
chr7 (1-64)||(27021991-27022054)
chr7 (177-228)||(36245524-36245575)
chr7 (183-229)||(22174117-22174163)
chr7 (45-128)||(23720813-23720898)
chr7 (101-147)||(24549899-24549945)
chr7 (82-140)||(40169660-40169718)
chr7 (35-65)||(48202974-48203004)
chr7 (158-235)||(1569108-1569185)
chr7 (198-235)||(35713830-35713867)
chr7 (112-222)||(43791568-43791682)
chr7 (156-220)||(1531489-1531553)
chr7 (199-235)||(29653659-29653695)
chr7 (183-231)||(38920887-38920935)
chr7 (200-236)||(38921200-38921236)
[»] chr8 (80 HSPs)
chr8 (1-236)||(32043524-32043760)
chr8 (8-236)||(25985462-25985688)
chr8 (78-231)||(45419244-45419400)
chr8 (1-235)||(10080020-10080253)
chr8 (1-236)||(16351324-16351548)
chr8 (1-236)||(39953376-39953612)
chr8 (40-225)||(25985723-25985912)
chr8 (1-144)||(36395158-36395298)
chr8 (158-236)||(7531756-7531834)
chr8 (35-217)||(9695599-9695782)
chr8 (2-137)||(36565457-36565588)
chr8 (158-232)||(38178376-38178450)
chr8 (1-227)||(29520594-29520810)
chr8 (5-141)||(36545085-36545219)
chr8 (158-234)||(37826383-37826459)
chr8 (78-228)||(29700283-29700438)
chr8 (84-234)||(30748470-30748625)
chr8 (78-197)||(34196166-34196287)
chr8 (177-231)||(45512612-45512666)
chr8 (1-127)||(13171875-13171997)
chr8 (78-154)||(34196079-34196153)
chr8 (177-236)||(2216399-2216458)
chr8 (1-124)||(30456441-30456559)
chr8 (158-236)||(38409134-38409212)
chr8 (158-235)||(3079717-3079793)
chr8 (5-144)||(40813260-40813397)
chr8 (37-232)||(5908612-5908812)
chr8 (78-141)||(8879652-8879715)
chr8 (1-141)||(42854216-42854352)
chr8 (181-235)||(4011198-4011252)
chr8 (177-235)||(35643719-35643777)
chr8 (1-231)||(44681156-44681387)
chr8 (55-151)||(2776431-2776528)
chr8 (5-62)||(16705700-16705757)
chr8 (182-235)||(16994557-16994610)
chr8 (77-154)||(43732562-43732639)
chr8 (15-235)||(78988-79196)
chr8 (183-235)||(5127383-5127435)
chr8 (176-232)||(9904998-9905054)
chr8 (190-230)||(29709821-29709861)
chr8 (78-141)||(12491350-12491413)
chr8 (192-235)||(23023351-23023394)
chr8 (160-231)||(32931055-32931126)
chr8 (37-136)||(2796527-2796622)
chr8 (59-149)||(12611523-12611613)
chr8 (189-231)||(28169515-28169557)
chr8 (1-235)||(30783155-30783388)
chr8 (1-144)||(39946791-39946930)
chr8 (184-235)||(41444453-41444506)
chr8 (170-231)||(9070092-9070153)
chr8 (85-229)||(16917198-16917346)
chr8 (198-235)||(17491767-17491804)
chr8 (5-62)||(36069581-36069638)
chr8 (78-154)||(18474159-18474235)
chr8 (78-154)||(36143372-36143448)
chr8 (189-229)||(43733330-43733370)
chr8 (78-117)||(7103277-7103316)
chr8 (181-236)||(16971866-16971921)
chr8 (177-236)||(24399901-24399960)
chr8 (189-232)||(33827873-33827916)
chr8 (204-235)||(39967612-39967643)
chr8 (189-231)||(13589602-13589644)
chr8 (158-236)||(16715365-16715443)
chr8 (185-235)||(30198379-30198429)
chr8 (70-231)||(33511355-33511520)
chr8 (177-231)||(35362767-35362821)
chr8 (82-140)||(35643814-35643872)
chr8 (177-231)||(35914718-35914772)
chr8 (160-226)||(43904787-43904853)
chr8 (37-141)||(18125145-18125243)
chr8 (178-231)||(27037747-27037800)
chr8 (198-235)||(38392006-38392043)
chr8 (78-131)||(41444548-41444601)
chr8 (70-123)||(42493536-42493589)
chr8 (37-141)||(11523935-11524036)
chr8 (198-230)||(14903693-14903725)
chr8 (14-66)||(21121105-21121157)
chr8 (199-231)||(28269795-28269827)
chr8 (203-231)||(30456411-30456439)
chr8 (188-236)||(30812928-30812976)
[»] chr5 (76 HSPs)
chr5 (16-236)||(2712897-2713114)
chr5 (9-228)||(10082865-10083079)
chr5 (37-236)||(14749277-14749477)
chr5 (1-231)||(11002538-11002769)
chr5 (6-236)||(31636032-31636261)
chr5 (1-236)||(21952285-21952525)
chr5 (36-236)||(1525606-1525814)
chr5 (84-235)||(42199299-42199455)
chr5 (10-149)||(33667161-33667294)
chr5 (90-236)||(38578633-38578784)
chr5 (78-154)||(37065536-37065612)
chr5 (35-235)||(7359373-7359573)
chr5 (72-224)||(18698801-18698952)
chr5 (1-141)||(2075686-2075822)
chr5 (5-124)||(14667695-14667816)
chr5 (178-236)||(33667547-33667605)
chr5 (79-235)||(15489605-15489766)
chr5 (77-154)||(36123391-36123467)
chr5 (78-149)||(18351111-18351183)
chr5 (1-139)||(1275199-1275332)
chr5 (177-235)||(3775180-3775238)
chr5 (1-141)||(4496316-4496454)
chr5 (177-231)||(6859492-6859546)
chr5 (1-235)||(7678414-7678647)
chr5 (158-235)||(12576973-12577050)
chr5 (4-231)||(12492501-12492732)
chr5 (37-141)||(14665680-14665784)
chr5 (1-64)||(5305550-5305613)
chr5 (1-144)||(10639231-10639377)
chr5 (1-141)||(24178444-24178580)
chr5 (5-231)||(32516496-32516720)
chr5 (37-141)||(38684937-38685037)
chr5 (1-140)||(1287792-1287937)
chr5 (78-235)||(38684487-38684649)
chr5 (158-235)||(42199485-42199562)
chr5 (175-235)||(15369910-15369969)
chr5 (191-235)||(29922409-29922453)
chr5 (55-143)||(34273011-34273099)
chr5 (176-231)||(27992-28047)
chr5 (1-60)||(9235003-9235062)
chr5 (1-141)||(16347590-16347726)
chr5 (192-235)||(27998567-27998610)
chr5 (183-229)||(5305756-5305802)
chr5 (177-231)||(6889104-6889158)
chr5 (182-236)||(38341537-38341591)
chr5 (78-144)||(43475247-43475313)
chr5 (183-235)||(9235166-9235216)
chr5 (86-131)||(21193862-21193907)
chr5 (81-142)||(28676605-28676666)
chr5 (8-64)||(683977-684033)
chr5 (199-235)||(1001295-1001331)
chr5 (199-235)||(3775278-3775314)
chr5 (45-140)||(43558040-43558133)
chr5 (79-154)||(79521-79596)
chr5 (37-141)||(3301814-3301914)
chr5 (78-141)||(28977071-28977134)
chr5 (70-116)||(3097172-3097218)
chr5 (177-235)||(9917563-9917621)
chr5 (1-59)||(21093710-21093768)
chr5 (95-236)||(34734508-34734655)
chr5 (1-54)||(6368220-6368273)
chr5 (178-231)||(6788179-6788232)
chr5 (206-235)||(11753144-11753173)
chr5 (70-139)||(15370006-15370074)
chr5 (202-231)||(15588505-15588534)
chr5 (79-124)||(15588769-15588814)
chr5 (171-232)||(17213179-17213240)
chr5 (198-235)||(30588579-30588616)
chr5 (1-62)||(41110028-41110089)
chr5 (37-154)||(6859351-6859464)
chr5 (189-228)||(8082073-8082113)
chr5 (176-228)||(8492456-8492508)
chr5 (183-235)||(14667888-14667940)
chr5 (36-64)||(27998402-27998430)
chr5 (177-225)||(40938034-40938082)
chr5 (1-29)||(43558134-43558162)
[»] chr4 (110 HSPs)
chr4 (35-236)||(46371992-46372194)
chr4 (55-234)||(35555761-35555945)
chr4 (1-229)||(17900414-17900643)
chr4 (35-236)||(31897540-31897740)
chr4 (77-236)||(26356625-26356789)
chr4 (6-236)||(10208977-10209206)
chr4 (104-231)||(31961383-31961515)
chr4 (81-221)||(42285828-42285972)
chr4 (1-232)||(54470141-54470373)
chr4 (1-154)||(41192768-41192919)
chr4 (5-236)||(44360021-44360256)
chr4 (5-217)||(25257713-25257923)
chr4 (1-196)||(2588915-2589120)
chr4 (1-231)||(31959931-31960162)
chr4 (1-234)||(33709853-33710092)
chr4 (1-141)||(48174305-48174441)
chr4 (78-235)||(42639133-42639295)
chr4 (83-228)||(50471538-50471688)
chr4 (82-232)||(1427400-1427555)
chr4 (35-151)||(44047550-44047662)
chr4 (1-144)||(436163-436302)
chr4 (35-117)||(10775658-10775736)
chr4 (9-151)||(51252663-51252799)
chr4 (5-141)||(52569727-52569859)
chr4 (5-143)||(31403228-31403364)
chr4 (37-231)||(33190965-33191160)
chr4 (36-235)||(40018302-40018503)
chr4 (177-235)||(49987519-49987577)
chr4 (99-236)||(51550360-51550502)
chr4 (66-219)||(49738737-49738891)
chr4 (38-154)||(46715571-46715678)
chr4 (49-224)||(31339519-31339693)
chr4 (1-141)||(43433852-43433994)
chr4 (78-215)||(29398825-29398967)
chr4 (158-235)||(7682023-7682100)
chr4 (158-235)||(47147465-47147542)
chr4 (41-150)||(38570950-38571055)
chr4 (163-236)||(49738662-49738731)
chr4 (1-141)||(33227143-33227279)
chr4 (37-130)||(49987398-49987487)
chr4 (35-154)||(1380335-1380450)
chr4 (37-154)||(28497458-28497572)
chr4 (189-231)||(35690394-35690436)
chr4 (177-231)||(53540401-53540455)
chr4 (178-235)||(13805378-13805435)
chr4 (182-235)||(18966721-18966774)
chr4 (9-231)||(21106926-21107157)
chr4 (158-231)||(28351651-28351724)
chr4 (78-139)||(31459037-31459098)
chr4 (37-139)||(37797822-37797920)
chr4 (1-122)||(38266076-38266197)
chr4 (182-235)||(45569122-45569175)
chr4 (110-228)||(53518443-53518563)
chr4 (188-236)||(2557784-2557832)
chr4 (199-235)||(8599054-8599090)
chr4 (158-218)||(11389816-11389876)
chr4 (1-114)||(12494684-12494793)
chr4 (171-235)||(42293378-42293442)
chr4 (43-140)||(47265415-47265508)
chr4 (35-111)||(6478910-6478982)
chr4 (176-235)||(42566349-42566408)
chr4 (5-60)||(45423557-45423612)
chr4 (77-151)||(50662393-50662468)
chr4 (78-141)||(53707801-53707864)
chr4 (78-231)||(4440860-4441018)
chr4 (158-236)||(6478795-6478873)
chr4 (177-235)||(8459148-8459206)
chr4 (1-140)||(23906508-23906649)
chr4 (201-235)||(37488226-37488260)
chr4 (114-229)||(42618922-42619038)
chr4 (189-231)||(45204956-45204998)
chr4 (181-235)||(48033200-48033254)
chr4 (79-141)||(50286970-50287032)
chr4 (158-231)||(21945755-21945828)
chr4 (82-139)||(30807601-30807658)
chr4 (35-137)||(36557246-36557343)
chr4 (158-231)||(39708525-39708598)
chr4 (158-235)||(44667358-44667435)
chr4 (5-62)||(45185304-45185361)
chr4 (1-141)||(48622755-48622889)
chr4 (182-235)||(51252566-51252619)
chr4 (190-227)||(55809111-55809148)
chr4 (158-234)||(2589164-2589240)
chr4 (59-139)||(30621418-30621498)
chr4 (178-230)||(34233142-34233194)
chr4 (171-235)||(44719477-44719541)
chr4 (177-221)||(45184258-45184302)
chr4 (5-144)||(45205054-45205192)
chr4 (177-229)||(53517641-53517693)
chr4 (190-230)||(55805789-55805829)
chr4 (180-235)||(934544-934598)
chr4 (5-60)||(43070053-43070108)
chr4 (181-236)||(51009223-51009278)
chr4 (78-140)||(28236190-28236252)
chr4 (177-231)||(30853454-30853508)
chr4 (197-235)||(33225946-33225984)
chr4 (201-239)||(36556855-36556893)
chr4 (177-235)||(38903831-38903888)
chr4 (177-231)||(44860944-44860998)
chr4 (189-231)||(51421853-51421895)
chr4 (177-227)||(55028927-55028977)
chr4 (176-230)||(55579142-55579196)
chr4 (156-232)||(1793550-1793624)
chr4 (177-234)||(15661972-15662029)
chr4 (198-235)||(20999132-20999169)
chr4 (206-235)||(21214699-21214728)
chr4 (158-235)||(37948491-37948568)
chr4 (158-235)||(44686683-44686760)
chr4 (85-142)||(47611741-47611798)
chr4 (183-235)||(50680857-50680909)
[»] chr6 (40 HSPs)
chr6 (1-231)||(9593825-9594060)
chr6 (1-236)||(10617346-10617574)
chr6 (2-146)||(33083993-33084133)
chr6 (78-231)||(31818539-31818696)
chr6 (5-141)||(5631756-5631892)
chr6 (5-141)||(30031194-30031326)
chr6 (78-236)||(7513501-7513666)
chr6 (1-141)||(28085310-28085446)
chr6 (78-144)||(21352046-21352112)
chr6 (79-149)||(24665818-24665888)
chr6 (183-235)||(34618-34670)
chr6 (162-220)||(3963895-3963953)
chr6 (1-150)||(5258351-5258498)
chr6 (177-235)||(33997657-33997715)
chr6 (41-127)||(6641635-6641717)
chr6 (162-235)||(7080436-7080509)
chr6 (178-235)||(8364668-8364725)
chr6 (1-65)||(33998288-33998352)
chr6 (186-236)||(38883-38933)
chr6 (177-235)||(4948417-4948475)
chr6 (177-235)||(4955388-4955446)
chr6 (78-233)||(21870178-21870348)
chr6 (65-154)||(6293585-6293674)
chr6 (1-58)||(9568594-9568651)
chr6 (76-140)||(26291786-26291848)
chr6 (37-141)||(32755889-32755991)
chr6 (79-139)||(43266-43326)
chr6 (4-144)||(608096-608230)
chr6 (177-236)||(1747753-1747812)
chr6 (156-231)||(6055888-6055963)
chr6 (82-141)||(30679417-30679476)
chr6 (37-84)||(32400113-32400160)
chr6 (177-235)||(32913374-32913433)
chr6 (189-227)||(5095957-5095995)
chr6 (189-231)||(7133869-7133911)
chr6 (189-231)||(7136792-7136834)
chr6 (158-231)||(35199739-35199812)
chr6 (183-235)||(579535-579587)
chr6 (200-232)||(13674759-13674791)
chr6 (37-114)||(20427875-20427948)
[»] chr2 (60 HSPs)
chr2 (71-236)||(44437833-44438003)
chr2 (40-236)||(43832068-43832268)
chr2 (99-236)||(42543263-42543405)
chr2 (1-236)||(4598674-4598912)
chr2 (5-235)||(9556482-9556712)
chr2 (37-235)||(37481730-37481929)
chr2 (37-235)||(38434921-38435121)
chr2 (158-235)||(19235097-19235174)
chr2 (5-225)||(23714384-23714602)
chr2 (5-225)||(24102056-24102274)
chr2 (37-231)||(43752064-43752259)
chr2 (41-217)||(11412695-11412871)
chr2 (1-141)||(38452897-38453037)
chr2 (65-231)||(12141538-12141709)
chr2 (5-148)||(8180718-8180857)
chr2 (37-140)||(40759069-40759169)
chr2 (159-235)||(26784453-26784529)
chr2 (1-144)||(41763251-41763389)
chr2 (158-228)||(5759115-5759185)
chr2 (158-235)||(33504315-33504392)
chr2 (7-141)||(12734641-12734769)
chr2 (38-148)||(25834650-25834758)
chr2 (7-144)||(16097195-16097332)
chr2 (1-232)||(42092453-42092683)
chr2 (1-141)||(3866006-3866142)
chr2 (158-236)||(786913-786991)
chr2 (183-236)||(12489914-12489967)
chr2 (37-151)||(13240947-13241057)
chr2 (186-235)||(26670888-26670937)
chr2 (198-235)||(33287553-33287590)
chr2 (1-144)||(9578912-9579049)
chr2 (156-235)||(29548750-29548829)
chr2 (2-64)||(2610463-2610525)
chr2 (159-229)||(4481581-4481651)
chr2 (75-141)||(24583844-24583910)
chr2 (177-231)||(37470250-37470304)
chr2 (1-154)||(45077682-45077838)
chr2 (189-231)||(45543189-45543231)
chr2 (55-140)||(2610572-2610657)
chr2 (79-151)||(14197364-14197437)
chr2 (158-226)||(7293694-7293762)
chr2 (163-235)||(19855559-19855631)
chr2 (184-236)||(36869976-36870028)
chr2 (86-142)||(41779519-41779575)
chr2 (158-229)||(18959003-18959074)
chr2 (176-235)||(19024288-19024347)
chr2 (78-141)||(43238305-43238368)
chr2 (156-230)||(13444026-13444100)
chr2 (177-235)||(18188863-18188921)
chr2 (178-232)||(32754798-32754852)
chr2 (158-236)||(36819268-36819346)
chr2 (177-235)||(37452339-37452397)
chr2 (43-104)||(4807568-4807629)
chr2 (55-140)||(13149315-13149400)
chr2 (158-235)||(38860270-38860347)
chr2 (78-114)||(786837-786873)
chr2 (79-151)||(9647811-9647883)
chr2 (189-229)||(13592417-13592457)
chr2 (158-232)||(43260496-43260567)
chr2 (190-226)||(43573251-43573287)
[»] chr1 (95 HSPs)
chr1 (1-235)||(43423651-43423888)
chr1 (78-236)||(10272266-10272428)
chr1 (1-231)||(26016371-26016602)
chr1 (2-236)||(40419574-40419809)
chr1 (101-236)||(28528385-28528525)
chr1 (55-229)||(2544583-2544761)
chr1 (37-231)||(9509288-9509483)
chr1 (78-236)||(27637743-27637908)
chr1 (158-236)||(50771668-50771746)
chr1 (78-235)||(3818969-3819131)
chr1 (78-236)||(37263338-37263501)
chr1 (177-234)||(51584855-51584912)
chr1 (97-236)||(52442640-52442784)
chr1 (1-141)||(1210679-1210815)
chr1 (5-231)||(9599511-9599738)
chr1 (95-236)||(12261825-12261971)
chr1 (45-235)||(48431519-48431712)
chr1 (14-141)||(38807883-38808010)
chr1 (158-236)||(43898321-43898399)
chr1 (37-231)||(32231071-32231266)
chr1 (72-231)||(32404643-32404807)
chr1 (37-141)||(51440977-51441077)
chr1 (37-137)||(51812495-51812591)
chr1 (78-235)||(38868889-38869051)
chr1 (5-141)||(22090032-22090166)
chr1 (35-212)||(39422179-39422355)
chr1 (55-235)||(40416355-40416540)
chr1 (158-235)||(42501200-42501277)
chr1 (159-236)||(50806762-50806839)
chr1 (1-141)||(696203-696339)
chr1 (78-228)||(6025612-6025767)
chr1 (187-234)||(7083011-7083058)
chr1 (70-149)||(8343062-8343141)
chr1 (1-141)||(9592668-9592804)
chr1 (1-141)||(30202342-30202478)
chr1 (1-141)||(34792561-34792697)
chr1 (159-222)||(49377417-49377480)
chr1 (1-140)||(18793201-18793336)
chr1 (96-154)||(29807891-29807949)
chr1 (5-235)||(16943113-16943343)
chr1 (158-235)||(17815571-17815648)
chr1 (78-225)||(5338731-5338883)
chr1 (180-232)||(8342997-8343049)
chr1 (183-231)||(36339920-36339968)
chr1 (177-236)||(853897-853956)
chr1 (9-141)||(4001667-4001795)
chr1 (1-139)||(8671854-8671986)
chr1 (37-141)||(15085904-15086004)
chr1 (5-228)||(27847924-27848148)
chr1 (190-232)||(19969328-19969370)
chr1 (82-236)||(15577432-15577588)
chr1 (158-231)||(30834094-30834167)
chr1 (158-231)||(52073169-52073241)
chr1 (183-235)||(29577255-29577307)
chr1 (177-233)||(33560973-33561029)
chr1 (177-229)||(44008690-44008742)
chr1 (1-141)||(32082957-32083093)
chr1 (1-141)||(49347605-49347741)
chr1 (78-141)||(51602063-51602126)
chr1 (189-231)||(8628153-8628195)
chr1 (177-235)||(8796320-8796378)
chr1 (177-235)||(12231476-12231534)
chr1 (78-144)||(13827926-13827992)
chr1 (158-235)||(7124233-7124310)
chr1 (199-232)||(8203250-8203283)
chr1 (198-231)||(34827221-34827254)
chr1 (1-141)||(43240591-43240729)
chr1 (110-154)||(10569266-10569310)
chr1 (60-151)||(1661419-1661510)
chr1 (79-217)||(13827701-13827844)
chr1 (158-220)||(17640183-17640243)
chr1 (5-136)||(17815413-17815537)
chr1 (38-154)||(19908238-19908350)
chr1 (177-236)||(30396841-30396900)
chr1 (78-141)||(39140527-39140590)
chr1 (177-227)||(6641222-6641272)
chr1 (86-144)||(16822231-16822289)
chr1 (189-231)||(26299208-26299250)
chr1 (158-232)||(26444456-26444530)
chr1 (189-231)||(39318252-39318294)
chr1 (158-231)||(46226406-46226480)
chr1 (189-227)||(52561710-52561748)
chr1 (202-231)||(7762554-7762583)
chr1 (172-225)||(28511924-28511977)
chr1 (202-231)||(29128919-29128948)
chr1 (199-236)||(29807989-29808026)
chr1 (158-231)||(38807788-38807861)
chr1 (55-96)||(40920782-40920823)
chr1 (190-231)||(41560353-41560394)
chr1 (37-107)||(4379975-4380049)
chr1 (70-142)||(7921834-7921906)
chr1 (17-65)||(19969645-19969693)
chr1 (199-231)||(40228123-40228155)
chr1 (199-235)||(46388509-46388545)
chr1 (199-235)||(46394953-46394989)
[»] chr3 (84 HSPs)
chr3 (87-235)||(11581460-11581613)
chr3 (10-235)||(39600794-39601020)
chr3 (84-235)||(21200561-21200717)
chr3 (36-232)||(31454341-31454538)
chr3 (77-235)||(37351413-37351576)
chr3 (1-144)||(52138734-52138873)
chr3 (1-229)||(54128312-54128542)
chr3 (35-140)||(3987015-3987116)
chr3 (78-230)||(38430855-38431012)
chr3 (1-137)||(28245371-28245503)
chr3 (175-236)||(26990322-26990383)
chr3 (158-235)||(31261055-31261131)
chr3 (1-235)||(2340830-2341062)
chr3 (6-141)||(49503766-49503897)
chr3 (55-231)||(19676198-19676378)
chr3 (158-235)||(40981988-40982065)
chr3 (78-142)||(50960844-50960908)
chr3 (158-229)||(43254983-43255054)
chr3 (158-236)||(22902890-22902968)
chr3 (1-139)||(51447924-51448057)
chr3 (1-141)||(36820173-36820307)
chr3 (87-231)||(39235154-39235303)
chr3 (78-154)||(29374941-29375017)
chr3 (5-144)||(19736934-19737070)
chr3 (9-231)||(45289208-45289434)
chr3 (1-141)||(47233808-47233944)
chr3 (4-151)||(50249318-50249467)
chr3 (1-141)||(54278954-54279090)
chr3 (5-144)||(344920-345055)
chr3 (177-235)||(46146207-46146265)
chr3 (39-144)||(38060399-38060504)
chr3 (77-154)||(39535639-39535716)
chr3 (184-232)||(27893207-27893255)
chr3 (78-153)||(31453138-31453214)
chr3 (183-231)||(33755459-33755507)
chr3 (78-154)||(41842710-41842786)
chr3 (1-141)||(22007-22142)
chr3 (35-139)||(3365049-3365149)
chr3 (78-141)||(25191384-25191447)
chr3 (78-231)||(42510133-42510289)
chr3 (5-64)||(46568054-46568113)
chr3 (82-224)||(48734259-48734406)
chr3 (75-130)||(48953645-48953700)
chr3 (78-144)||(19757907-19757973)
chr3 (177-235)||(37228193-37228251)
chr3 (177-231)||(40116585-40116639)
chr3 (84-154)||(46140445-46140515)
chr3 (78-140)||(49841626-49841688)
chr3 (189-231)||(54365092-54365134)
chr3 (16-141)||(5168777-5168902)
chr3 (78-131)||(26490322-26490375)
chr3 (1-62)||(38054624-38054685)
chr3 (82-139)||(38850131-38850188)
chr3 (158-231)||(48508327-48508400)
chr3 (87-226)||(659541-659685)
chr3 (78-130)||(26388488-26388540)
chr3 (203-235)||(36820090-36820122)
chr3 (175-234)||(11284102-11284160)
chr3 (97-148)||(26990234-26990285)
chr3 (189-232)||(30294237-30294280)
chr3 (200-231)||(34844690-34844721)
chr3 (200-235)||(43308696-43308731)
chr3 (200-231)||(45486969-45487000)
chr3 (184-231)||(53998755-53998802)
chr3 (177-231)||(14783673-14783727)
chr3 (82-140)||(33272235-33272293)
chr3 (177-235)||(37228039-37228097)
chr3 (77-131)||(37487164-37487218)
chr3 (78-144)||(43694974-43695040)
chr3 (97-131)||(46568132-46568166)
chr3 (79-140)||(4472553-4472614)
chr3 (158-227)||(7278552-7278620)
chr3 (198-235)||(21427695-21427732)
chr3 (183-235)||(29475805-29475855)
chr3 (198-231)||(34719197-34719230)
chr3 (51-141)||(35033130-35033216)
chr3 (176-209)||(40743287-40743320)
chr3 (183-231)||(41482255-41482304)
chr3 (183-231)||(23534687-23534735)
chr3 (37-65)||(29600869-29600897)
chr3 (158-234)||(37598284-37598359)
chr3 (199-235)||(44443317-44443353)
chr3 (159-235)||(45493805-45493881)
chr3 (179-232)||(46431795-46431844)
[»] scaffold0018 (4 HSPs)
scaffold0018 (1-141)||(31402-31538)
scaffold0018 (177-235)||(178533-178591)
scaffold0018 (78-142)||(44079-44143)
scaffold0018 (177-225)||(43991-44039)
[»] scaffold0325 (1 HSPs)
scaffold0325 (78-236)||(11805-11967)
[»] scaffold0570 (1 HSPs)
scaffold0570 (78-232)||(1064-1223)
[»] scaffold0021 (1 HSPs)
scaffold0021 (77-127)||(101001-101051)
[»] scaffold0036 (1 HSPs)
scaffold0036 (1-140)||(4484-4620)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-131)||(11818-11946)
[»] scaffold0157 (1 HSPs)
scaffold0157 (5-114)||(25684-25789)
[»] scaffold0024 (1 HSPs)
scaffold0024 (43-139)||(82697-82789)
[»] scaffold1609 (1 HSPs)
scaffold1609 (190-236)||(1065-1111)
[»] scaffold1259 (1 HSPs)
scaffold1259 (202-231)||(1636-1665)
[»] scaffold0050 (1 HSPs)
scaffold0050 (187-227)||(58347-58387)


Alignment Details
Target: chr7 (Bit Score: 236; Significance: 1e-130; HSPs: 89)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 14593695 - 14593930
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14593695 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 14593794  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtatatagtagatcagatagagaggagtcaaatcactagaggtagggga 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14593795 gaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtatatagtagatcagatagagaggagtcaaatcactagaggtagggga 14593894  T
Q  201 agacctagaaaaactataagagaaactattaagaag 236  Q
    ||||||||||||||||||||||||||||||||||||    
T  14593895 agacctagaaaaactataagagaaactattaagaag 14593930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 16013218 - 16013453
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16013218 ttgcgttggatgtgtggtaagactagacggaaccaaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtacaaaaaatggta 16013317  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtatatagtagatcagatagagaggagtcaaatcactagaggtagggga 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16013318 gaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattatgtatatagtagatcagatagagaggagtcaaatcaccagaggtagggga 16013417  T
Q  201 agacctagaaaaactataagagaaactattaagaag 236  Q
    ||||||||||||||||||||||||||||||||||||    
T  16013418 agacctagaaaaactataagagaaactattaagaag 16013453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 36514553 - 36514320
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    ||||||||||||||||||||||||| |||| |  |||||||||| |||||||||||||||||       ||||||  |||||||||||||||| ||||||    
T  36514553 ttgcgttggatgtgtggtaagactaaacgggatagaattagaaaggacaacattagagagagt------tggggtagcacctatagtagaaaagatggta 36514460  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta-tat----agtagatcagatagagaggagtcaaatcactagaggta 195  Q
    ||||||||||||||||| ||||||||||||| |||| ||| ||||||||||||| |||    |||||||||||||||| |||||||| ||||||||||||    
T  36514459 gaaactagacttaggtggtttgggcatgtagagagacgacttgtggattctgtagtatggagagtagatcagatagaggggagtcaagtcactagaggta 36514360  T
Q  196 ggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    |||| |||| ||||||||  ||||||||| |||| ||||||    
T  36514359 gggg-agacatagaaaaaacataagagaagctatcaagaag 36514320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 5335856 - 5336087
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||| ||||||||||||||||||| |||   |||||||||||| ||||||||||||||       ||||||  || ||||||||| ||| |||||     
T  5335856 ttgcgttgaatgtgtggtaagactagacagaatgcaattagaaatgataacattagagagagt------tggggtagcatctatagtaggaaagatggtc 5335949  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta-----tatagtagatcagatagagaggagtcaaatcactagaggta 195  Q
    ||||||||||||||||| ||||||||| ||| ||||||| ||||||||||||||      | ||||||| |||| ||| |||||||||||||| ||||||    
T  5335950 gaaactagacttaggtggtttgggcatatagagagaagaactgtggattctgtagttaggagagtagattagatggaggggagtcaaatcactcgaggta 5336049  T
Q  196 ggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    |||||| |||| ||||||||||  |||| |||||||||||    
T  5336050 ggggaaaaccttgaaaaactat--gagatactattaagaa 5336087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 48736247 - 48736025
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||| |||||||||||||||||| |  |   ||||||||||||| |||||| |||||||||    ||||||  |||||| ||||||||| |||| |    
T  48736247 ttgcgttgaatgtgtggtaagactagatgagataaaattagaaatgacgacattatagagagagt----tggggtagcacctacagtagaaaagatggga 48736152  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta-----tatagtagatcagatagagaggagtcaaatcactagaggta 195  Q
    ||||||||||||||||| ||||  ||||||| | ||||||||||||||| ||||      | ||||||||| || ||| ||||||| |||||||||||||    
T  48736151 gaaactagacttaggtggtttgctcatgtagagcgaagacctgtggattatgtagttaggagagtagatcaaatggag-ggagtcagatcactagaggta 48736053  T
Q  196 ggggaagacctagaaaaactataagaga 223  Q
    |||  |||||| ||||||||||||||||    
T  48736052 gggctagaccttgaaaaactataagaga 48736025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 230
Target Start/End: Original strand, 47848612 - 47848838
Alignment:
Q  5 gttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaa 104  Q
    |||||||||||||||||||||||||| |  | || |||| ||| |||||||||||||||||    ||||||  | |||||||||||||| ||||| ||||    
T  47848612 gttggatgtgtggtaagactagacgggataggatcagaagtgataacattagagagagagt----tggggtagcgcctatagtagaaaagatggtggaaa 47848707  T
Q  105 ctagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta-----tatagtagatcagatagagaggagtcaaatcactagaggtagggg 199  Q
     ||| |||||||| ||||||||||| | |||||||| |||  ||||||||      | |||||||||||| |||   ||||  ||||||||||| || ||    
T  47848708 ataggcttaggtggtttgggcatgtcgagagaagacttgtaaattctgtactaaggagagtagatcagatggaggatagtctgatcactagaggcagagg 47848807  T
Q  200 aagacctagaaaaactataagagaaactatt 230  Q
    |||| ||||||||||||||||||||||||||    
T  47848808 aagaactagaaaaactataagagaaactatt 47848838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 37 - 233
Target Start/End: Original strand, 43282375 - 43282576
Alignment:
Q  37 attagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgaga 136  Q
    ||||||||||||||||||  |||||||| ||| ||||||  ||||||||||||||||   ||| |||||||| ||||||||| |||||||||||| ||||    
T  43282375 attagaaatgacaacattt-agagagagagagttggggtagcacctatagtagaaaagtcggtggaaactaggcttaggtgaattgggcatgtagagaga 43282473  T
Q  137 agacctgtggattctgtatatagtagatcagataga--gagg--agtcaaatcactagag--gtaggggaagacctagaaaaactataagagaaactatt 230  Q
    |||| ||  |||||||||   || |||  |||||||  ||||  ||||| ||||| ||||  |||| ||| |||||||||||||||||||||||||||||    
T  43282474 agacttgcagattctgtaggaaggagagtagatagatggaggatagtcagatcacaagaggtgtagaggatgacctagaaaaactataagagaaactatt 43282573  T
Q  231 aag 233  Q
    |||    
T  43282574 aag 43282576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 78 - 236
Target Start/End: Complemental strand, 18605421 - 18605258
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtatatag-----tagatcagataga 172  Q
    |||||||| || |||| ||||||||||||| ||||||||| |||| |||||||| |||||||| ||| |||| | ||  |||     |||||||||| ||    
T  18605421 cacctatattataaaagatggtagaaactaaacttaggtggtttgagcatgtagagagaagacatgtagattatatagttaggagattagatcagatcga 18605322  T
Q  173 gaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    |  |||||||||||||||| ||| ||| |||||||||||||||| |||||||||||||| ||||    
T  18605321 ggagagtcaaatcactagatgtatgggtagacctagaaaaactacaagagaaactattatgaag 18605258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 28628281 - 28628050
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||| |||||||| ||||||||| | |||| |  | ||||||||| |||||||||||||| ||||    ||| ||  |||||| ||||||||  |||||     
T  28628281 ttgccttggatgtatggtaagaccatacgggatgggattagaaattacaacattagagagggagt----tggagtagcacctagagtagaaatgatggtg 28628186  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtat-----atagtagatcagatagagaggagtcaaatcactagaggta 195  Q
    |||| | | |||||||| ||||||||||||  ||||| |||||| |||| ||||      | |||||||| ||| |||   ||||||||||| |||||||    
T  28628185 gaaaattggcttaggtggtttgggcatgtaaagagaaaacctgtagattatgtagtaaggagagtagatccgatggaggatagtcaaatcacaagaggta 28628086  T
Q  196 ggggaagacctagaaaaactataagagaaactatta 231  Q
    | ||||||||||||||||||||||||||||||||||    
T  28628085 gaggaagacctagaaaaactataagagaaactatta 28628050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 39906717 - 39906582
Alignment:
Q  2 tgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtag 101  Q
    ||||||||||| ||||||||||||||| | |  | ||||| ||||||| ||||||||||||||||||    |||  ||||||||||||||||  ||||||    
T  39906717 tgcgttggatgagtggtaagactagacaggataggattaggaatgacaccattagagagagagtgag----ggtagcacctatagtagaaaagttggtag 39906622  T
Q  102 aaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    ||| ||| ||||| |||||||||||||||| |||||||||    
T  39906621 aaaataggcttagatgatttgggcatgtagagagaagacc 39906582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 230
Target Start/End: Original strand, 36136702 - 36136928
Alignment:
Q  5 gttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaa 104  Q
    |||||||| |||||||||||||| || |  |  |||| ||||||| |||||||||||||||    ||||||  |||||||||||||||| ||||||||||    
T  36136702 gttggatgggtggtaagactagaagggataggtttaggaatgacaccattagagagagagt----tggggtagcacctatagtagaaaagatggtagaaa 36136797  T
Q  105 ctagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta-----tatagtagatcagatagagaggagtcaaatcactagaggtagggg 199  Q
     ||| |||||||  ||||||||| ||| ||||| |||| | |||  ||||      | || ||||||||| |||  |||||| ||||  ||| |||| ||    
T  36136798 atagtcttaggttgtttgggcatatagagagaatacctatagatgttgtagtacgaagagcagatcagatggaggagagtcagatcagaagaagtagagg 36136897  T
Q  200 aagacctagaaaaactataagagaaactatt 230  Q
    |||||||||||||||||||||||||||||||    
T  36136898 aagacctagaaaaactataagagaaactatt 36136928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 78 - 236
Target Start/End: Original strand, 18637569 - 18637732
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtatatag-----tagatcagataga 172  Q
    |||||||| || |||| ||||||||||||| ||||||||| |||| |||||||| |||||||| ||| |||| | ||  |||     |||||||||| ||    
T  18637569 cacctatattataaaagatggtagaaactaaacttaggtggtttgagcatgtagagagaagacatgtagattatatagttaggagattagatcagatcga 18637668  T
Q  173 gaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    |  |||||||||||||||| ||| ||| ||||||||||||| || |||||||||||||| ||||    
T  18637669 ggagagtcaaatcactagatgtatgggtagacctagaaaaaatacaagagaaactattatgaag 18637732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 78 - 236
Target Start/End: Original strand, 18651003 - 18651166
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtatatag-----tagatcagataga 172  Q
    |||||||| || |||| ||||||||||||| ||||||||| |||| |||||||| |||||||| ||| |||| | ||  |||     |||||||||| ||    
T  18651003 cacctatattataaaagatggtagaaactaaacttaggtggtttgagcatgtagagagaagacatgtagattatatagttaggagattagatcagatcga 18651102  T
Q  173 gaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    |  |||||||||||||||| ||| ||| ||||||||||||| || |||||||||||||| ||||    
T  18651103 ggagagtcaaatcactagatgtatgggtagacctagaaaaaatacaagagaaactattatgaag 18651166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 49 - 235
Target Start/End: Original strand, 12966000 - 12966185
Alignment:
Q  49 aacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggat 148  Q
    |||||||||||| ||| || |||| ||  ||||||||| |||||| ||||| |||||||  |||||||| ||||||||||||| ||||||||| ||  ||    
T  12966000 aacattagagagggagagaactggagtagcacctatagaagaaaagatggtggaaactatgcttaggtggtttgggcatgtagagagaagacccgtaaat 12966099  T
Q  149 tctgta-----tatagtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||||      | |||||||||  |  |||  |||||||||||||||      ||||||||||||||||||||||||||||||||||||||    
T  12966100 tctgtagtaaggagagtagatcaagtgaagactagtcaaatcactaga------ggaagacctagaaaaactataagagaaactattaagaa 12966185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 34869354 - 34869490
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||||||| |||||||||||||||   |  | ||||| ||||||| ||||||||||||||||    |||||  ||||||||||||||||  |||||    
T  34869354 ttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtg----ggggtagcacctatagtagaaaagttggta 34869449  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    |||| ||| ||||| || ||||||||||||| |||||||||    
T  34869450 gaaaataggcttagatggtttgggcatgtagagagaagacc 34869490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 35906549 - 35906413
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||||||| ||||||||||||||| | |  | ||||| ||||||| ||||||||||||||||    | |||  ||||||||||||||||  |||||    
T  35906549 ttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccattagagagagagtg----gaggtagcacctatagtagaaaagttggta 35906454  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    |||| ||| ||||| || ||||||||||||| |||||||||    
T  35906453 gaaaataggcttagatggtttgggcatgtagagagaagacc 35906413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 13859356 - 13859125
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||||| | |||||||||||||||   |  | ||||| ||||||| ||||||||||||||||    |||||  ||||||||||||||||  |||||    
T  13859356 ttgcgttggacgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtg----ggggtagcacctatagtagaaaagttggta 13859261  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgt-----atatagtagatcagatagagaggagtcaaatcactagaggta 195  Q
    |||| ||| ||||| || ||||||||||||| ||||||||| || ||| ||||       | ||||||||| || |||  ||||||| | |  |||||||    
T  13859260 gaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgctgtcgtaagaagagtagatcaaatggaggagagtcaagttagaagaggta 13859161  T
Q  196 ggggaagacctagaaaaactataagagaaactatta 231  Q
    | ||||||||||| |||||||| |||||||| ||||    
T  13859160 gaggaagacctaggaaaactattagagaaaccatta 13859125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 39811891 - 39812098
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||| ||||||||||||||||||||||||  |  | |||||||||||||||||||||||||||||    |||||   |||||||  |||||||||||||     
T  39811891 ttgctttggatgtgtggtaagactagacgtgataggattagaaatgacaacattagagagagagt----tggggcagcacctatcatagaaaaaatggtg 39811986  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta-----tatagtagatcagatagagaggagtcaaatcactagaggta 195  Q
     ||||| | |||||||  ||||||||||||| |||||||  ||| |||||| ||      | |||||||||||| |||   || |||||||||||||| |    
T  39811987 aaaactcggcttaggtagtttgggcatgtagagagaagagatgtagattctatagtaaggagagtagatcagatggaggaaagccaaatcactagaggaa 39812086  T
Q  196 ggggaagaccta 207  Q
    | ||||||||||    
T  39812087 gtggaagaccta 39812098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 141
Target Start/End: Original strand, 49029213 - 49029346
Alignment:
Q  4 cgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaa 103  Q
    ||||||||| |||||||||||||||   |  | ||||| ||||||| ||||||||||||||||    |||||  ||||||||||||||||  ||||||||    
T  49029213 cgttggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtg----ggggtagcacctatagtagaaaagttggtagaa 49029308  T
Q  104 actagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    | ||| ||||| || ||||||||||||| |||||||||    
T  49029309 aataggcttagatggtttgggcatgtagagagaagacc 49029346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 151
Target Start/End: Original strand, 28858016 - 28858124
Alignment:
Q  37 attagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgaga 136  Q
    |||||||||||||||||||| ||||||      ||||||| ||||||| |||||||| ||||||||||||  | ||||||| |||||||||||||  |||    
T  28858016 attagaaatgacaacattagtgagaga------tggggtggcacctattgtagaaaacatggtagaaactcaagttaggtggtttgggcatgtagaaaga 28858109  T
Q  137 agacctgtggattct 151  Q
     ||||||||||||||    
T  28858110 tgacctgtggattct 28858124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 31005157 - 31005293
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||||||| ||||||||||||||| | |  | ||||| ||| ||| ||||||||||||||||    |||||  ||||||||||||||||  |||||    
T  31005157 ttgcgttggatgagtggtaagactagacaggataggattaggaataacaccattagagagagagtg----ggggtagcacctatagtagaaaagttggta 31005252  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    |||| |||  |||| || ||||||||||||| |||||||||    
T  31005253 gaaaataggtttagatggtttgggcatgtagagagaagacc 31005293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 212
Target Start/End: Original strand, 1740767 - 1740948
Alignment:
Q  37 attagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgaga 136  Q
    ||||||||||| |||||||||||||||| ||| | ||||  || ||| ||||||||| ||||| |||||||| |||||||| |||||| ||||||  ||     
T  1740767 attagaaatgagaacattagagagagagagagtttgggtagcatctacagtagaaaatatggtggaaactaggcttaggtggtttgggtatgtagatagg 1740866  T
Q  137 agacctgtggattctgta-----tatagtagatcagatagagaggagtcaaatcactagaggtaggggaaga-cctagaaaa 212  Q
    |||  |||||||| ||||      | |||||||||||| ||| | ||||||||||||||||  || |||||| |||||||||    
T  1740867 agaattgtggattttgtagtaaggagagtagatcagatggagggtagtcaaatcactagagccagaggaagatcctagaaaa 1740948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 33072888 - 33073022
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||||||| |||||||||||||||   |  | ||||| ||||||| |||||||||||| |      |||||  ||||||||||||||||  |||||    
T  33072888 ttgcgttggatgagtggtaagactagacaagataggattaggaatgacaccattagagagagtg------ggggtagcacctatagtagaaaagttggta 33072981  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    |||| ||| ||||| |||||||||||||||| |||||||||    
T  33072982 gaaaataggcttagatgatttgggcatgtagagagaagacc 33073022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 40139257 - 40139133
Alignment:
Q  8 ggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaacta 107  Q
    ||||||||||||||||||||||| |    |||||||| |||||||||||||||||       | ||||  |||||||||||||||| ||||| ||||||     
T  40139257 ggatgtgtggtaagactagacgggataagattagaaaagacaacattagagagag-------tcgggtttcacctatagtagaaaatatggtggaaactg 40139165  T
Q  108 gacttaggtgatttgggcatgtagtgagaaga 139  Q
    | |||||||||| ||||||||||| |||||||    
T  40139164 ggcttaggtgatctgggcatgtagggagaaga 40139133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 61 - 154
Target Start/End: Original strand, 45558352 - 45558445
Alignment:
Q  61 agagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta 154  Q
    |||| ||| ||||||  ||||||||||||||||  ||||||||||| |||||||||| |||| ||| |||| ||||| ||||||||||||||||    
T  45558352 agagagagttggggtaccacctatagtagaaaagttggtagaaactcgacttaggtggtttgtgcacgtagagagaatacctgtggattctgta 45558445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 37617878 - 37618015
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||||||| |||||||||||||||   |  | ||||| ||||||| ||||||||||||||||    |||||  ||||||||||||||||  |||||    
T  37617878 ttgcgttggatgagtggtaagactagacaagataggattaggaatgacaccattagagagagagtg----ggggtagcacctatagtagaaaagttggta 37617973  T
Q  101 g-aaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    | ||| ||| ||||| || ||||||||||||| |||||||||    
T  37617974 gaaaaataggcttagatggtttgggcatgtagagagaagacc 37618015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 30814842 - 30814784
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||| ||||||||||| || |||||||||||||| |||||||||||||||||||||||    
T  30814842 agtcagatcactagaggcagaggaagacctagaaacactataagagaaactattaagaa 30814784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 61 - 193
Target Start/End: Complemental strand, 19262725 - 19262589
Alignment:
Q  61 agagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta-----t 155  Q
    |||| ||| ||||||  ||||||| |||||||| |||||||||||| | |||||||| |||| |||||||| |||||||||||| |||| ||||          
T  19262725 agagagagttggggtagcacctattgtagaaaagatggtagaaacttggcttaggtggtttgagcatgtagagagaagacctgtagatt-tgtagtaaga 19262627  T
Q  156 atagtagatcagatagagaggagtcaaatcactagagg 193  Q
    | |||||||||||| ||| | |||||||||||||||||    
T  19262626 agagtagatcagatggagtgtagtcaaatcactagagg 19262589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 139
Target Start/End: Complemental strand, 27021990 - 27021906
Alignment:
Q  55 agagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaaga 139  Q
    |||||||||| ||| ||||||  ||||||||||||||||  ||||  ||||||| |||||||| ||||||||||||| |||||||    
T  27021990 agagagagagagagttggggtagcacctatagtagaaaagttggtgaaaactaggcttaggtggtttgggcatgtagagagaaga 27021906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 30200303 - 30200186
Alignment:
Q  5 gttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaa 104  Q
    |||||||||||||||||| |||| || |    ||||||||||||||||||||||||  ||        ||| ||||||||||||||||| ||||| ||||    
T  30200303 gttggatgtgtggtaagattagatgggatatgattagaaatgacaacattagagagttag--------ggtaacacctatagtagaaaagatggtggaaa 30200212  T
Q  105 ctagacttaggtgatttgggcatgta 130  Q
    |||| |||||||||||| ||||||||    
T  30200211 ctaggcttaggtgattttggcatgta 30200186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 45601597 - 45601645
Alignment:
Q  187 ctagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  45601597 ctagaggtagaggaagacctagaaaaactataagagaaaccattaagaa 45601645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 37 - 141
Target Start/End: Original strand, 6374838 - 6374938
Alignment:
Q  37 attagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgaga 136  Q
    ||||| ||||||| ||||||||||||||||    |||||  ||||||||||||||||  ||||||||| ||| ||||| || |||| |||||||| ||||    
T  6374838 attaggaatgacaccattagagagagagtg----ggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgagcatgtagagaga 6374933  T
Q  137 agacc 141  Q
    |||||    
T  6374934 agacc 6374938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 11593894 - 11594030
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||||||| ||||||||||||||| | |    ||||| ||||||| |||| |||||||||||    |||||  ||||||||||||||||  |||||    
T  11593894 ttgcgttggatgagtggtaagactagacaggataagattaggaatgacaccatttgagagagagtg----ggggtagcacctatagtagaaaagttggta 11593989  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    |||| ||   |||| || ||||||||||||| |||||||||    
T  11593990 gaaaatacggttagatggtttgggcatgtagagagaagacc 11594030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 163 - 234
Target Start/End: Complemental strand, 19119608 - 19119538
Alignment:
Q  163 atcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 234  Q
    ||||||| |||  ||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| ||||    
T  19119608 atcagatggaggagagtcaaatcactagaggtagtggaagacctag-aaaactattagagaaactatcaaga 19119538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 235
Target Start/End: Complemental strand, 24549872 - 24549801
Alignment:
Q  164 tcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    |||||| ||| ||| ||||||||||||||||||  ||||||||  || ||||||||||||||||||||||||    
T  24549872 tcagatggaggggattcaaatcactagaggtagaagaagacctgaaagaactataagagaaactattaagaa 24549801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 33350154 - 33350018
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||| ||||||| |||||||||||||||   |  | ||||  ||||||| ||||||||||||||||    |||||  ||||||||||||||||  || ||    
T  33350154 ttgccttggatgagtggtaagactagacatgataggattaagaatgacaccattagagagagagtg----ggggttgcacctatagtagaaaagttgcta 33350059  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    |||| ||| ||||| || ||||||||||||| |||||||||    
T  33350058 gaaaataggcttagatggtttgggcatgtagagagaagacc 33350018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 181 - 236
Target Start/End: Original strand, 40830317 - 40830372
Alignment:
Q  181 aaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    ||||||||||||  || ||||||||||||||| |||||||||||||||||||||||    
T  40830317 aaatcactagagacagaggaagacctagaaaatctataagagaaactattaagaag 40830372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 37 - 149
Target Start/End: Original strand, 41948486 - 41948594
Alignment:
Q  37 attagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgaga 136  Q
    |||||||||||||||||||||| ||||||    ||| ||  ||| || | ||||||| ||||| |||||||| |||| ||| ||||||||||||| ||||    
T  41948486 attagaaatgacaacattagagtgagagt----tggcgtagcacttacaatagaaaagatggtggaaactaggcttaagtggtttgggcatgtagagaga 41948581  T
Q  137 agacctgtggatt 149  Q
    |||||| ||||||    
T  41948582 agacctctggatt 41948594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 37 - 141
Target Start/End: Complemental strand, 45836792 - 45836692
Alignment:
Q  37 attagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgaga 136  Q
    ||||| ||||||| ||||||||||||||||    |||||  ||||||||||||||||  ||||||||| ||| ||||| || ||||| ||||||| ||||    
T  45836792 attaggaatgacaccattagagagagagtg----ggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagaga 45836697  T
Q  137 agacc 141  Q
    |||||    
T  45836696 agacc 45836692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 233
Target Start/End: Complemental strand, 6420747 - 6420605
Alignment:
Q  96 tggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtat-----atagtagatcagatagagaggagtcaaatcactag 190  Q
    |||| |||||||| |||||||| ||||||||||||| |||||||| ||| ||| |||||      | ||||||||||||  |    ||||| ||||||||    
T  6420747 tggtggaaactaggcttaggtggtttgggcatgtagagagaagacttgtagatactgtagtaaggagagtagatcagatgaatgatagtcagatcactag 6420648  T
Q  191 aggtaggggaagacctagaaaaactataagagaaactattaag 233  Q
    ||| || || ||||||| ||||||||||||||| |||||||||    
T  6420647 aggcagaggtagacctataaaaactataagagatactattaag 6420605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 137
Target Start/End: Complemental strand, 7189524 - 7189442
Alignment:
Q  55 agagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaa 137  Q
    ||||| |||| ||| ||||||  |||||||||||||||| |||||||||| ||  |||||||| ||||||||||||| |||||    
T  7189524 agagaaagagagagttggggtcgcacctatagtagaaaagatggtagaaaataagcttaggtggtttgggcatgtagagagaa 7189442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 29653902 - 29653844
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagaga 59  Q
    |||||||||||||||||||| ||||||||| |  ||||||||||||||| |||||||||    
T  29653902 ttgcgttggatgtgtggtaacactagacgggatagaattagaaatgacatcattagaga 29653844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 71 - 141
Target Start/End: Original strand, 43491308 - 43491378
Alignment:
Q  71 ggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    ||||| |||||||||||| ||||| ||||||||| ||| ||||| || ||||||||||||| |||||||||    
T  43491308 ggggtaacacctatagtataaaaattggtagaaaataggcttagatggtttgggcatgtagagagaagacc 43491378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 46356204 - 46356069
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||| ||| ||||||||||||||| | |  | ||||| ||||||| ||| ||||||||| ||    |||||  ||||||||||||||||  |||||    
T  46356204 ttgcgttgaatgagtggtaagactagacaggataggattaggaatgacaccatcagagagagaatg----ggggtagcacctatagtagaaaagttggta 46356109  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagac 140  Q
    |||| |||  |||| || ||||||||||||| ||||||||    
T  46356108 gaaaataggtttagatggtttgggcatgtagagagaagac 46356069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 231
Target Start/End: Complemental strand, 2885997 - 2885839
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattc---tgta--tatagtagatcagataga 172  Q
    ||||||||||||||||  ||||||||| ||| ||||| || ||||||||||||| ||||||| | || ||| |   ||||   | |||||||||||| ||    
T  2885997 cacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagatccgtagatgccgttgtacgaagagtagatcagatgga 2885898  T
Q  173 gaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    |  ||||||  |||  ||||||||  |||||||||| ||||||||||||||||| ||||    
T  2885897 ggagagtcaggtcaaaagaggtagaagaagacctaggaaaactataagagaaaccatta 2885839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 183 - 236
Target Start/End: Original strand, 34745864 - 34745917
Alignment:
Q  183 atcactagaggtaggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    |||||||||| |||||| |||||||||||||| |||||||||||||||| ||||    
T  34745864 atcactagagttaggggtagacctagaaaaaccataagagaaactattaggaag 34745917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 40008765 - 40008704
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagag 62  Q
    |||||| ||||||||||||| |||||||  ||  ||||||||||||||||||||||||||||    
T  40008765 ttgcgtaggatgtgtggtaaaactagacaaaaaagaattagaaatgacaacattagagagag 40008704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 141
Target Start/End: Complemental strand, 44855514 - 44855384
Alignment:
Q  7 tggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaact 106  Q
    |||||| |||||||||||||||   |  | ||||| ||||||| ||||||||||||||||    ||| |   |||||||||||||||  ||||||||| |    
T  44855514 tggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtg----gggatagtacctatagtagaaaagttggtagaaaat 44855419  T
Q  107 agacttaggtgatttgggcatgtagtgagaagacc 141  Q
    || ||||| || ||||||||||||| |||||||||    
T  44855418 aggcttagatggtttgggcatgtagagagaagacc 44855384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 26742086 - 26742011
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactat--aagagaaactatta 231  Q
    |||||||||||||||||  ||||| ||||||||||| || ||||||| ||||||||||||  |||| |||||||||    
T  26742086 agtagatcagatagagaatagtcagatcactagaggcagaggaagacgtagaaaaactatcaaagataaactatta 26742011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 154
Target Start/End: Original strand, 42187409 - 42187553
Alignment:
Q  5 gttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaa 104  Q
    ||||||||||| |||||||||||||| |   | ||||||||| || ||||||| |||||||     |||||  |||||||| ||||||| ||||| ||||    
T  42187409 gttggatgtgtagtaagactagacgggatata-ttagaaatggcagcattagaaagagagtc----ggggtagcacctataatagaaaagatggtggaaa 42187503  T
Q  105 ctagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta 154  Q
     ||| |||||||| ||||||||||||  |||||| ||||| |||| ||||    
T  42187504 ataggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgta 42187553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 44401290 - 44401238
Alignment:
Q  183 atcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    |||||||||||| | ||| |||||||||||| |||||||||||||||||||||    
T  44401290 atcactagaggtggaggatgacctagaaaaattataagagaaactattaagaa 44401238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 141
Target Start/End: Complemental strand, 12841550 - 12841487
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    ||||||||||||||||  ||||||||| ||| ||||| || ||||||||||||| |||||||||    
T  12841550 cacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacc 12841487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 25579352 - 25579277
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgt 153  Q
    |||| |||| |||||||||||| |||| ||| |||||||| |||||| |||||| |||||||| ||| ||||||||    
T  25579352 cacccatagcagaaaaaatggtggaaaataggcttaggtggtttggggatgtagagagaagacatgtagattctgt 25579277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 231
Target Start/End: Complemental strand, 28562554 - 28562483
Alignment:
Q  160 tagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    |||||||||||||||  ||| | || || |||||||| ||| |||||||||||| |||||||||||||||||    
T  28562554 tagatcagatagagaatagttagattacaagaggtagaggatgacctagaaaaaatataagagaaactatta 28562483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 141
Target Start/End: Original strand, 29650391 - 29650454
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    ||||||||||||||||| ||||||||| ||| ||||| || ||||| ||||||| |||||||||    
T  29650391 cacctatagtagaaaaattggtagaaaataggcttagatggtttggacatgtagagagaagacc 29650454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 38606939 - 38607074
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    ||||| |||||| |||||||||||||||   |  | ||||| ||||||||||||| ||||||||||    |||||  |||||||||||||||   |||||    
T  38606939 ttgcgctggatgagtggtaagactagacatgataggattaggaatgacaacatta-agagagagtg----ggggtagcacctatagtagaaaggttggta 38607033  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    |||| ||| ||||| || ||||| ||||||| |||||||||    
T  38607034 gaaaataggcttagatggtttggacatgtagagagaagacc 38607074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 141
Target Start/End: Complemental strand, 46014492 - 46014393
Alignment:
Q  37 attagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgaga 136  Q
    ||||||||||||| ||||||||||||||||    |||||  ||||||||||||||||  ||||||||| ||| ||||| ||  |||| ||||||| ||||    
T  46014492 attagaaatgacaccattagagagagagtg----ggggttgcacctatagtagaaaagttggtagaaaataggcttagatg-gttggacatgtagagaga 46014398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 140
Target Start/End: Original strand, 7220751 - 7220813
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagac 140  Q
    ||||||| |||||||| ||| |||||||| | |||||||| ||||||||||||| ||||||||    
T  7220751 cacctattgtagaaaagatgatagaaacttggcttaggtggtttgggcatgtagagagaagac 7220813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 144
Target Start/End: Original strand, 7273046 - 7273112
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgt 144  Q
    ||||||||||||||||  ||||||||| ||| ||||| || ||||||||||||  ||||||||||||    
T  7273046 cacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtacagagaagacctgt 7273112  T

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Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 140
Target Start/End: Original strand, 35713706 - 35713764
Alignment:
Q  82 tatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagac 140  Q
    |||||| ||||||||||| |||| ||| |||||||| ||||||||||||| ||||||||    
T  35713706 tatagttgaaaaaatggtggaaaataggcttaggtggtttgggcatgtagagagaagac 35713764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 232
Target Start/End: Complemental strand, 38135476 - 38135329
Alignment:
Q  89 gaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtatatag----tagatcagatagagaggagtcaaat 184  Q
    ||||| ||||| |||| ||| |||||||| ||||| |||||||  |||||||| || |||| ||||   ||    |||||||||| |||   ||||| ||    
T  38135476 gaaaagatggtggaaaataggcttaggtggtttggacatgtagacagaagaccagtagattttgtagtaaggagatagatcagatggaggatagtcagat 38135377  T
Q  185 cactagaggtaggggaagacctagaaaaactataagagaaactattaa 232  Q
    || |||||| ||  ||||||||||||||| ||||||||||||||||||    
T  38135376 cattagaggcagatgaagacctagaaaaagtataagagaaactattaa 38135329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 136
Target Start/End: Original strand, 38920801 - 38920859
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgaga 136  Q
    |||||||||||||||| ||||| |||||||| |||| ||| ||||||||||||| ||||    
T  38920801 cacctatagtagaaaagatggtggaaactaggcttaagtggtttgggcatgtagagaga 38920859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 231
Target Start/End: Complemental strand, 40980087 - 40980045
Alignment:
Q  189 agaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    |||||||| ||||||||||| ||||||||||||||||||||||    
T  40980087 agaggtagaggaagacctaggaaaactataagagaaactatta 40980045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 42177189 - 42177131
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    |||||||||| ||||||| | ||||||| ||||||| ||||||||||| ||||||||||    
T  42177189 agtcaaatcattagaggtggaggaagacgtagaaaacctataagagaatctattaagaa 42177131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 1011139 - 1011212
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    ||||||||||||| ||  |||||| ||||  |||||||| |||||||||||||||| ||| ||||||| |||||    
T  1011139 agtagatcagataaaggagagtcagatcaaaagaggtagaggaagacctagaaaaattatgagagaaattatta 1011212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 199 - 232
Target Start/End: Complemental strand, 21517529 - 21517496
Alignment:
Q  199 gaagacctagaaaaactataagagaaactattaa 232  Q
    ||||||||||||||||||||||||||||||||||    
T  21517529 gaagacctagaaaaactataagagaaactattaa 21517496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 139
Target Start/End: Original strand, 28020938 - 28021032
Alignment:
Q  41 gaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaaga 139  Q
    ||||||| ||||||||||| |||||    ||||||  ||| ||| |||||||| ||||| |||||| | |||||||| ||||||||||||| |||||||    
T  28020938 gaaatgataacattagagaaagagt----tggggtagcacttatcgtagaaaagatggtggaaacttggcttaggtggtttgggcatgtagagagaaga 28021032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 28359349 - 28359426
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcact-agaggtaggggaagacctagaaaaactataagagaaactattaaga 234  Q
    |||| ||||||| ||| | |||||||||||| |||||||| | ||| |||||||||| ||||||||||| ||||||||    
T  28359349 agtatatcagatggagggtagtcaaatcacttagaggtagagaaagtcctagaaaaattataagagaaaatattaaga 28359426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 30914742 - 30914681
Alignment:
Q  79 acctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagac 140  Q
    |||||| ||||||||||||||||||||| | ||| |||| ||||||||||||  ||||||||    
T  30914742 acctattgtagaaaaaatggtagaaactcggctttggtggtttgggcatgtaacgagaagac 30914681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 143
Target Start/End: Original strand, 40830230 - 40830295
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctg 143  Q
    ||||||| | |||||| ||||||||||||  ||||||||| |||||||||| || |||||||||||    
T  40830230 cacctattgaagaaaagatggtagaaactctacttaggtggtttgggcatgaagagagaagacctg 40830295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 43281610 - 43281744
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    ||||| |||||| |||||||||||||||   |  | ||||| ||||||| |||||||||||| |      |||||  ||||||||||||||||  |||||    
T  43281610 ttgcgctggatgagtggtaagactagacaatataggattaggaatgacaccattagagagagtg------ggggtagcacctatagtagaaaagttggta 43281703  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    |||| ||| ||||| || ||||| ||||||| |||||||||    
T  43281704 gaaaataggcttagatggtttggacatgtagagagaagacc 43281744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 32368508 - 32368452
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaag 233  Q
    ||||||||||||||||| |  |||||| |||||||| ||||||||||| ||||||||    
T  32368508 agtcaaatcactagaggcaaaggaagatctagaaaatctataagagaagctattaag 32368452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 141
Target Start/End: Complemental strand, 35559306 - 35559205
Alignment:
Q  37 attagaaatgacaacattagagagagagtgagctggggtgacacct-atagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgag 135  Q
    ||||| ||||||| |||| |||||||||||    |||||  ||||| |||||||||||  ||||||||| ||| ||||| |||||||| ||| |||||||    
T  35559306 attaggaatgacaccatttgagagagagtg----ggggtagcaccttatagtagaaaagttggtagaaaataggcttagatgatttggacatttagtgag 35559211  T
Q  136 aagacc 141  Q
    ||||||    
T  35559210 aagacc 35559205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 130
Target Start/End: Complemental strand, 47796476 - 47796359
Alignment:
Q  11 tgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagac 110  Q
    ||||||||||||||||| || |  | |||||||||||||| |||||| |||||  ||| ||| ||  || |||||||||||||  |||| |||| ||| |    
T  47796476 tgtgtggtaagactagatgggataggattagaaatgacaatattagatagaga--gagttggagtaccaactatagtagaaaaggtggttgaaaataggc 47796379  T
Q  111 ttaggtgatttgggcatgta 130  Q
     |||||| ||||||||||||    
T  47796378 gtaggtggtttgggcatgta 47796359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 141
Target Start/End: Original strand, 22349627 - 22349690
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    ||||||||||||||||  ||||||||| ||| ||||| || ||| ||||||||| |||||||||    
T  22349627 cacctatagtagaaaagttggtagaaaataggcttagatggttttggcatgtagagagaagacc 22349690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 27022054 - 27021991
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagag 64  Q
    |||| ||||||||||| ||||||||||| | |  | |||| |||||||||||||||||||||||    
T  27022054 ttgcattggatgtgtgataagactagacaggataggattaaaaatgacaacattagagagagag 27021991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 36245575 - 36245524
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaacta 228  Q
    ||||| ||||||||||  || |||||||||| ||||||||||||||||||||    
T  36245575 agtcacatcactagagacagaggaagacctataaaaactataagagaaacta 36245524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 229
Target Start/End: Original strand, 22174117 - 22174163
Alignment:
Q  183 atcactagaggtaggggaagacctagaaaaactataagagaaactat 229  Q
    ||||||||||| || |||| || ||||||||||||||||||||||||    
T  22174117 atcactagaggcagaggaaaacgtagaaaaactataagagaaactat 22174163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 128
Target Start/End: Original strand, 23720813 - 23720898
Alignment:
Q  45 tgacaacattag--agagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatg 128  Q
    ||||||||||||  |||||||| ||| | ||||  |||||||||||||||| ||||  || ||||| |||||||| ||||||||||    
T  23720813 tgacaacattagtgagagagagagagttagggttgcacctatagtagaaaagatggcggagactagccttaggtggtttgggcatg 23720898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 147
Target Start/End: Complemental strand, 24549945 - 24549899
Alignment:
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacctgtgga 147  Q
    |||||||| |||||||| ||||||||||||| ||||||||| |||||    
T  24549945 gaaactaggcttaggtggtttgggcatgtagagagaagacccgtgga 24549899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 140
Target Start/End: Original strand, 40169660 - 40169718
Alignment:
Q  82 tatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagac 140  Q
    |||||||||||| ||||| |||| ||| |||||||| ||||||||||||| || |||||    
T  40169660 tatagtagaaaagatggtggaaaataggcttaggtggtttgggcatgtagagataagac 40169718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 65
Target Start/End: Complemental strand, 48203004 - 48202974
Alignment:
Q  35 gaattagaaatgacaacattagagagagagt 65  Q
    |||||||||||||||||||||||||||||||    
T  48203004 gaattagaaatgacaacattagagagagagt 48202974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 1569108 - 1569185
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    |||||||||||| |||   ||||| ||  ||||||| || || || ||||||||||||||||||| ||||||||||||    
T  1569108 agtagatcagatggaggatagtcagattgctagaggcagaggtagtcctagaaaaactataagagtaactattaagaa 1569185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 235
Target Start/End: Original strand, 35713830 - 35713867
Alignment:
Q  198 ggaagacctagaaaaactataagagaaactattaagaa 235  Q
    |||||||||||||||||||||| ||||| |||||||||    
T  35713830 ggaagacctagaaaaactataacagaaattattaagaa 35713867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 222
Target Start/End: Complemental strand, 43791682 - 43791568
Alignment:
Q  112 taggtgatttgggcatgtagtgagaagacctgtggattctgtatata-----gtagatcagatagagagg-agtcaaatcactagaggtaggggaagacc 205  Q
    |||||| ||||||||||| | |||||||||||| |||||||||  ||     ||||||| | | ||| || ||||| |||||||||||||||||   |||    
T  43791682 taggtggtttgggcatgtggagagaagacctgtagattctgtagttaagagagtagatccgttggagggggagtcagatcactagaggtagggg--tacc 43791585  T
Q  206 tagaaaaactataagag 222  Q
    |||||||||||||||||    
T  43791584 tagaaaaactataagag 43791568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 220
Target Start/End: Complemental strand, 1531553 - 1531489
Alignment:
Q  156 atagtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataag 220  Q
    ||||||||||||||| ||  ||| || ||||  |||||||| |||||||||| ||||||||||||    
T  1531553 atagtagatcagataaaggagagccagatcaaaagaggtagaggaagacctaaaaaaactataag 1531489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 29653695 - 29653659
Alignment:
Q  199 gaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  29653695 gaagaccaagaaaaactgtaagagaaactattaagaa 29653659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 231
Target Start/End: Original strand, 38920887 - 38920935
Alignment:
Q  183 atcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    ||||||||||| ||  | | |||||||||||||||||||||||||||||    
T  38920887 atcactagaggcagatgtaaacctagaaaaactataagagaaactatta 38920935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 38921236 - 38921200
Alignment:
Q  200 aagacctagaaaaactataagagaaactattaagaag 236  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  38921236 aagacctagaaaaactagaagaggaactattaagaag 38921200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 4e-59; HSPs: 80)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 32043524 - 32043760
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||    ||||||  ||||||||||| |||| ||||||    
T  32043524 ttgcgttggatgtgtggtaagactagacgggatagaattagaaatgacaacattagagagagagt----tggggtatcacctatagtacaaaagatggta 32043619  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta-----tatagtagatcagatagagaggagtcaaatcactagaggta 195  Q
    |||||||||||| |||| ||||| ||||||| ||||||||||||||||  ||||      | | |||||||||| ||| || ||||||||||||||||||    
T  32043620 gaaactagactttggtggtttggccatgtagagagaagacctgtggatgttgtagtaaggagaatagatcagatggaggggtgtcaaatcactagaggta 32043719  T
Q  196 ggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    |||||||||||| ||||||||| ||||||||||| ||||||    
T  32043720 ggggaagacctaaaaaaactattagagaaactatcaagaag 32043760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 236
Target Start/End: Original strand, 25985462 - 25985688
Alignment:
Q  8 ggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaacta 107  Q
    |||||||||||||||| |||| | |  |||||||||| |||||||||||||||||       ||||||  |||||||||||||||| |||||||||||||    
T  25985462 ggatgtgtggtaagacaagacaggatagaattagaaacgacaacattagagagagt------tggggtagcacctatagtagaaaagatggtagaaacta 25985555  T
Q  108 gacttaggtgatttgggcatgtagtgagaagacctgtggattctgtatatag-----tagatcagatagagaggagtcaaatcactagaggtaggggaag 202  Q
    |||||  ||||||| ||||||| | |||||||| |||| ||| || |   ||     ||||||||||  || |||||||||||||||||||||| |||||    
T  25985556 gacttgcgtgattttggcatgt-gagagaagacatgtgaattttgaagtaaggagactagatcagatgtaggggagtcaaatcactagaggtagaggaag 25985654  T
Q  203 acctagaaaaactataagagaaactattaagaag 236  Q
    |||||||||||||| | | |||||||||||||||    
T  25985655 acctagaaaaactaaatgggaaactattaagaag 25985688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 78 - 231
Target Start/End: Original strand, 45419244 - 45419400
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattct-gtat--atagtagatcagatagaga 174  Q
    |||||||||||||||| |||||| ||| |||||||||||| ||||||||||||| || ||||||||| ||  || ||||  | |||||||||||| |||     
T  45419244 cacctatagtagaaaagatggtataaaatagacttaggtggtttgggcatgtagagataagacctgtagaggctagtatgaagagtagatcagatggagg 45419343  T
Q  175 ggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
     |||||| |||   |||||||| ||||||||||||||||||||||||||||||||||    
T  45419344 agagtcagatctgaagaggtagaggaagacctagaaaaactataagagaaactatta 45419400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 10080253 - 10080020
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    ||||||||| ||| |||||||||||||||  |    |||||||||||||||||||||||||||||    || |||  || ||| ||||||||| |||||     
T  10080253 ttgcgttgggtgtttggtaagactagacgagataagattagaaatgacaacattagagagagagt----tgaggtagcatcta-agtagaaaagatggtg 10080159  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtat-----atagtagatcagatagagaggagtcaaatcactagaggta 195  Q
    |||||||| | | | || ||||||||||||| ||||||||||| ||||| ||||      | ||||||||| ||  || |||||||||||||||||||||    
T  10080158 gaaactaggcct-gatggtttgggcatgtagagagaagacctgaggattttgtagtaaggagagtagatcaaatgaaggggagtcaaatcactagaggta 10080060  T
Q  196 ggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    | |||||||||||| ||||||||||| ||||| |||||||    
T  10080059 gaggaagacctagagaaactataagaaaaactgttaagaa 10080020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 16351324 - 16351548
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    ||||||||||| ||||||||||||||||||||  || |||||||||||||||||||||||||| | ||    |||  |||||||||||||||            
T  16351324 ttgcgttggatatgtggtaagactagacggaatagagttagaaatgacaacattagagagagaattag----ggtagcacctatagtagaaa-------- 16351411  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtat-----atagtagatcagatagagaggagtcaaatcactagaggta 195  Q
        |||||||| |||| ||| ||||||||| ||||| || | |||||  ||||      | |||||||||||| ||| |||||||| ||||| ||| ||    
T  16351412 ----ctagacttgggtggtttaggcatgtagagagaaaacttttggatcatgtagtaaggagagtagatcagatggaggggagtcaagtcacttgagata 16351507  T
Q  196 ggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    || ||||||||||||||||||| ||||||||||||||||||    
T  16351508 ggagaagacctagaaaaactattagagaaactattaagaag 16351548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 39953612 - 39953376
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||||||||||||||||| || ||   |   |||||||||| |  ||||||||||||||||    |||| |  ||||||||  |||||| ||||||    
T  39953612 ttgcgttggatgtgtggtaagattaaacatgatataattagaaataatgacattagagagagagt----tgggatagcacctatatgagaaaagatggta 39953517  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtat-----atagtagatcagatagagaggagtcaaatcactagaggta 195  Q
    ||||||||| ||||||| ||| ||||||||| |||  ||||| |||||| ||||      | ||||||||||||  ||  || ||| |||||||||||||    
T  39953516 gaaactagatttaggtggtttaggcatgtagagaggtgacctatggattatgtagtaaggagagtagatcagatgaaggcgaatcagatcactagaggta 39953417  T
Q  196 ggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    |||| |||||||| ||||||| |||||||||||||| ||||    
T  39953416 ggggtagacctaggaaaactaaaagagaaactattaggaag 39953376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 40 - 225
Target Start/End: Complemental strand, 25985912 - 25985723
Alignment:
Q  40 agaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaaga 139  Q
    ||||||||| |||||||||||||||   | ||||||  ||||||||||||||||  | ||||||||||||||||  || |||| |||| ||| |||||||    
T  25985912 agaaatgacgacattagagagagagattgttggggtagcacctatagtagaaaagtttgtagaaactagactta-ttggtttgtgcatttagagagaaga 25985814  T
Q  140 cctgtggattctgta-----tatagtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaa 225  Q
    |||||| ||| ||||      | |||||||||||| ||  ||||||| ||| ||||||||||||| ||| ||||||||| |||||||||||    
T  25985813 cctgtgaattttgtagtaaggagagtagatcagatggaagggagtcagatcgctagaggtaggggtagatctagaaaaaatataagagaaa 25985723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 36395298 - 36395158
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||||||| ||||||||||||||| | |  | ||||| ||||||| ||||||||||||||||    |||||  ||||||||||||||||  |||||    
T  36395298 ttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccattagagagagagtg----ggggtagcacctatagtagaaaagttggta 36395203  T
Q  101 gaaactagac-ttaggtgatttgggcatgtagtgagaagacctgt 144  Q
    |||| ||| | |||| || ||||||||||||| ||||||||||||    
T  36395202 gaaaataggctttagatggtttgggcatgtagagagaagacctgt 36395158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 158 - 236
Target Start/End: Complemental strand, 7531834 - 7531756
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    |||||||||||| ||| ||||||| ||||||||||||| ||| |||||||||||||||||| |||||||||||| ||||    
T  7531834 agtagatcagatggaggggagtcagatcactagaggtaagggtagacctagaaaaactatacgagaaactattaggaag 7531756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 35 - 217
Target Start/End: Original strand, 9695599 - 9695782
Alignment:
Q  35 gaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtga 134  Q
    ||||||||||||||||||||| ||||| | |    ||||||  |||||||||||||||| ||||| |||||| | |||||||| ||||||||||||| ||    
T  9695599 gaattagaaatgacaacattatagagatatt----tggggtagcacctatagtagaaaagatggtggaaactcggcttaggtggtttgggcatgtagaga 9695694  T
Q  135 gaagacctgtggattctg-----tatatagtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactat 217  Q
    |||| ||||| |||||||      | | ||||||| |||||  ||| ||||||||||||||||| || |||| || | ||||||||||    
T  9695695 gaagtcctgtagattctgaagtaaagagagtagatgagataaggagtagtcaaatcactagaggcagaggaaaacttggaaaaactat 9695782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 36565588 - 36565457
Alignment:
Q  2 tgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtag 101  Q
    ||||||||||| ||||||||||||||| | |  | ||||| ||||||| ||||||||||||||||    |||||  ||||||||||||||||  ||||||    
T  36565588 tgcgttggatgagtggtaagactagacaggataggattaggaatgacaccattagagagagagtg----ggggtagcacctatagtagaaaagttggtag 36565493  T
Q  102 aaactagacttaggtgatttgggcatgtagtgagaa 137  Q
    ||| ||| ||||| || ||||||||||||| |||||    
T  36565492 aaaataggcttagatggtttgggcatgtagagagaa 36565457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 158 - 232
Target Start/End: Complemental strand, 38178450 - 38178376
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaa 232  Q
    |||||||||||| |||   ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  38178450 agtagatcagatggaggatagtcaaatcgctagaggtagaggaagacctagaaaaactataagagaaactattaa 38178376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 29520594 - 29520810
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaa-aaatggt 99  Q
    ||||||||||||||||||||||||||| || |  | ||||||||||| | |||||||||||||||    ||||||| || |||||||||||| |||||||    
T  29520594 ttgcgttggatgtgtggtaagactagatgggataggattagaaatgataccattagagagagagt----tggggtggcatctatagtagaaataaatggt 29520689  T
Q  100 agaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta-----tatagtagatcagatagagaggagtcaaatcactagaggt 194  Q
     ||||           || ||||||||||||| |||||||| ||| |||| ||||      | |||||||||||| |||   ||||||||||| ||||||    
T  29520690 ggaaa-----------tggtttgggcatgtagagagaagacttgtagattttgtagtaaggagagtagatcagatggaggatagtcaaatcacaagaggt 29520778  T
Q  195 aggggaagacctagaaaaactataagagaaact 227  Q
    || ||||| ||||||||||||||||||||||||    
T  29520779 agaggaag-cctagaaaaactataagagaaact 29520810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 36545085 - 36545219
Alignment:
Q  5 gttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaa 104  Q
    |||||||| |||||||||||||||   |  | ||||| ||||||| |||||||||||||| | |  ||||| |||||||||||||||||  |||||||||    
T  36545085 gttggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagagagtg--ggggtaacacctatagtagaaaagttggtagaaa 36545182  T
Q  105 ctagacttaggtgatttgggcatgtagtgagaagacc 141  Q
     ||| ||||| || ||||||||||||| |||||||||    
T  36545183 ataggcttagatggtttgggcatgtagagagaagacc 36545219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 37826383 - 37826459
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 234  Q
    ||||||||||||  |||| ||||||||||||||||| || || ||||||||| ||||||||||||||||||||||||    
T  37826383 agtagatcagatgaagagtagtcaaatcactagaggcagagggagacctagataaactataagagaaactattaaga 37826459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 228
Target Start/End: Original strand, 29700283 - 29700438
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtat-----atagtagatcagataga 172  Q
    |||||||||||||||| ||||  |||| | | |||||||| ||||||||| ||| || ||||||  |||||||||||      | ||||||| |||| ||    
T  29700283 cacctatagtagaaaagatggaggaaagttggcttaggtggtttgggcatatagagaaaagaccattggattctgtagtaaggagagtagattagatgga 29700382  T
Q  173 gaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaacta 228  Q
    |   ||||| |||||||||||||| ||||||||||||||||||| |||||||||||    
T  29700383 ggatagtcatatcactagaggtagaggaagacctagaaaaactaaaagagaaacta 29700438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 234
Target Start/End: Original strand, 30748470 - 30748625
Alignment:
Q  84 tagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta-----tatagtagatcagatagagaggag 178  Q
    |||||||||| ||||| ||| | || |||||||| ||||||||||||| |||||||||||| |||||| ||      | ||||||||| ||| || | ||    
T  30748470 tagtagaaaagatggtggaatcaaggcttaggtggtttgggcatgtagagagaagacctgtagattctatagtaagcaaagtagatcaaatatagggtag 30748569  T
Q  179 tcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 234  Q
    |||||||||||||   || ||||||||| |||||||  ||||||||||||||||||    
T  30748570 tcaaatcactagaatcagaggaagaccttgaaaaaccgtaagagaaactattaaga 30748625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 197
Target Start/End: Original strand, 34196166 - 34196287
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtatatagtag----atcagatagag 173  Q
    ||||||||||||||||||  |||||||||||||||| ||| ||||||||||||  ||||||||||| ||||||||||   || ||    ||||||| |||    
T  34196166 cacctatagtagaaaaaacagtagaaactagacttatgtggtttgggcatgta--gagaagacctggggattctgtactaaggagagtaatcagatggag 34196263  T
Q  174 aggagtcaaatcactagaggtagg 197  Q
     | |||||||||||||||||||||    
T  34196264 ggaagtcaaatcactagaggtagg 34196287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 45512666 - 45512612
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  45512666 agtcaaatcactagaggcagaggaagacctagaaaaactataagagaaactatta 45512612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 13171997 - 13171875
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||| |||||||||| |||||||||||||| |  | |||||||||||||| ||||||||||||||    |||||   |||||||||||||||| |||||     
T  13171997 ttgcattggatgtgtagtaagactagacgggataggattagaaatgacaagattagagagagagt----tggggaagcacctatagtagaaaagatggtg 13171902  T
Q  101 gaaactagacttaggtgatttgggcat 127  Q
    |||| ||  |||||||| |||||||||    
T  13171901 gaaaatatgcttaggtggtttgggcat 13171875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 34196079 - 34196153
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta 154  Q
    ||||||||||||||||||  |||||||||||||||| ||| ||||||||||||  ||||||||||| ||||||||||    
T  34196079 cacctatagtagaaaaaacagtagaaactagacttatgtggtttgggcatgta--gagaagacctggggattctgta 34196153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 2216399 - 2216458
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    ||||| |||||||||||||| ||||||||||||||||  |||||||||||||||||||||    
T  2216399 agtcagatcactagaggtagaggaagacctagaaaaaacataagagaaactattaagaag 2216458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 30456559 - 30456441
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    ||||||||||||||||||||||| | | || |  |||||||||||||| |||||||||||| |||    | | ||  |||||||||||||||| ||||||    
T  30456559 ttgcgttggatgtgtggtaagacca-atgggatagaattagaaatgacgacattagagagatagt----tcgagttgcacctatagtagaaaagatggta 30456465  T
Q  101 gaaactagacttaggtgatttggg 124  Q
    ||||||||||||| ||| ||||||    
T  30456464 gaaactagacttatgtggtttggg 30456441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 236
Target Start/End: Complemental strand, 38409212 - 38409134
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    |||||||||||| |||  |||||||| |||| |||||||||| |||||||||||||||||| | |||||||||| ||||    
T  38409212 agtagatcagatggaggagagtcaaaccactggaggtaggggtagacctagaaaaactatacgcgaaactattatgaag 38409134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 3079793 - 3079717
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||||||||||  || ||||| |||||||||||||||  ||||||||||| | ||||||||||||||||||||||||    
T  3079793 agtagatcagatgaaggggagtgaaatcactagaggtaaaggaagacctag-ataactataagagaaactattaagaa 3079717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 144
Target Start/End: Original strand, 40813260 - 40813397
Alignment:
Q  5 gttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaa 104  Q
    |||||||| |||||||||||||||  ||  | ||||  ||||||| |||||||||||||| | |  |||||  ||||||||||||||||  |||||||||    
T  40813260 gttggatgagtggtaagactagacataataggattaagaatgacaccattagagagagagagtg--ggggtagcacctatagtagaaaagttggtagaaa 40813357  T
Q  105 ctagacttaggtgatttgggcatgtagtgagaagacctgt 144  Q
     |||  |||| || ||||||||||||| ||||||| ||||    
T  40813358 ataggtttagatggtttgggcatgtagagagaagatctgt 40813397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 37 - 232
Target Start/End: Original strand, 5908612 - 5908812
Alignment:
Q  37 attagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaa------ctagacttaggtgatttgggcatgta 130  Q
    |||||||||||||||||||||||||||||    ||||||   ||||||||||||||| ||||| ||||      |||||||||| || |||||  || ||    
T  5908612 attagaaatgacaacattagagagagagt----tggggtagaacctatagtagaaaagatggttgaaatggaaactagacttagttggtttgg--atata 5908705  T
Q  131 gtgagaagacctgtggattctgtat-----atagtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaa 225  Q
    | |||||||||||| |||| ||||      | |||||||||| | |||    |||| ||||||||||  |  ||||||||||||||||||||||||||||    
T  5908706 gagagaagacctgtagattttgtagtaaggagagtagatcaggtggaggatggtcagatcactagagacataggaagacctagaaaaactataagagaaa 5908805  T
Q  226 ctattaa 232  Q
    |||||||    
T  5908806 ctattaa 5908812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 141
Target Start/End: Complemental strand, 8879715 - 8879652
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    ||||||||||||||||  ||||||||| ||||||||| ||||||||| |||||| |||||||||    
T  8879715 cacctatagtagaaaagttggtagaaaatagacttagatgatttgggtatgtagagagaagacc 8879652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 42854352 - 42854216
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    ||||| |||||  ||||||||||||||| |||  | ||||| ||||||| ||| ||||||||||||    ||||| |||||||||| ||| ||  |||||    
T  42854352 ttgcgctggataagtggtaagactagacagaataggattaggaatgacaccatcagagagagagtg----ggggtaacacctatagcagagaagttggta 42854257  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    |||| ||| ||||| || ||||| ||||||| |||||||||    
T  42854256 gaaaataggcttagatggtttggacatgtagagagaagacc 42854216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 4011198 - 4011252
Alignment:
Q  181 aaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||| ||||||  || ||||||||||||||||||||||||||||||||||||||    
T  4011198 aaatcgctagagacagaggaagacctagaaaaactataagagaaactattaagaa 4011252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 35643777 - 35643719
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||| || |||||||| || |||||||||||||||||||||||||||| |||||||||    
T  35643777 agtcagattactagaggcagaggaagacctagaaaaactataagagaaattattaagaa 35643719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 44681387 - 44681156
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||| ||||||||||||||||||||||||  |    ||||||||||||||||||||||||| |||    || |||  |||||||| ||||||| |||||     
T  44681387 ttgcattggatgtgtggtaagactagacgagataagattagaaatgacaacattagagagacagt----tgtggtagcacctataatagaaaagatggtg 44681292  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtat-----atagtagatcagatagagaggagtcaaatcactagaggta 195  Q
    |||| ||  |||||  | |||||  || ||| |||||||||| | ||||||| |      | |||||||||||||||    ||||| ||||||||||| |    
T  44681291 gaaaataagcttagaaggtttggaaatctagagagaagacctatagattctgcagcaatgagagtagatcagatagatgacagtcatatcactagaggca 44681192  T
Q  196 ggggaagacctagaaaaactataagagaaactatta 231  Q
    | |||||| || ||||||||||| || |||||||||    
T  44681191 gaggaagagcttgaaaaactatatgacaaactatta 44681156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 151
Target Start/End: Complemental strand, 2776528 - 2776431
Alignment:
Q  55 agagagagagtgagctggggtga-cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattct 151  Q
    |||||||||| |||||||||  | ||||||| |||||||  |||||||||||| | |||||||| ||||||||||| | ||||||||| || ||||||    
T  2776528 agagagagagagagctgggggtagcacctatcgtagaaatgatggtagaaactcggcttaggtggtttgggcatgttgagagaagacccgtagattct 2776431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 16705700 - 16705757
Alignment:
Q  5 gttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagag 62  Q
    ||||| ||||||||||||||||| || |  ||||||||||||||||||||||||||||    
T  16705700 gttggttgtgtggtaagactagatgggatagaattagaaatgacaacattagagagag 16705757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 16994610 - 16994557
Alignment:
Q  182 aatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||||| |||| || ||||||||||||||||||||| ||||||||||||||||    
T  16994610 aatcactggaggaagaggaagacctagaaaaactatatgagaaactattaagaa 16994557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 154
Target Start/End: Original strand, 43732562 - 43732639
Alignment:
Q  77 acacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta 154  Q
    ||||||||||||||||| ||||||||||| ||||||||||| ||||  ||||||   ||||||| |||||||| ||||    
T  43732562 acacctatagtagaaaagatggtagaaacaagacttaggtggtttgcacatgtaaaaagaagacatgtggattttgta 43732639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 235
Target Start/End: Original strand, 78988 - 79196
Alignment:
Q  15 tggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaa---ctagact 111  Q
    |||||||||||||||| |  | ||||||||  ||||||||||||||||  |    | |||| ||||||| ||||||||  ||||||||||   |||| ||    
T  78988 tggtaagactagacgggataggattagaaacaacaacattagagagagcat----tcgggtaacacctacagtagaaatgatggtagaaattactaggct 79083  T
Q  112 taggtgatttgggcatgtagtgagaagacctgtggattctgtatatagtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaa 211  Q
    |||||| ||||||||||||  |||||||||||| |||| ||||    |||    ||   ||| | ||||||||||||||| | || ||||| | ||||||    
T  79084 taggtggtttgggcatgtatagagaagacctgtagattttgta----gta----ag---gagggtagtcaaatcactagaagcagaggaaggcttagaaa 79172  T
Q  212 aactataagagaaactattaagaa 235  Q
     |||||||||||||||||||||||    
T  79173 cactataagagaaactattaagaa 79196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 5127435 - 5127383
Alignment:
Q  183 atcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||||||||| || || || ||||||||||||||||||||||||||||||||    
T  5127435 atcactagaggcagaggtaggcctagaaaaactataagagaaactattaagaa 5127383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 232
Target Start/End: Complemental strand, 9905054 - 9904998
Alignment:
Q  176 gagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaa 232  Q
    |||||||||||  ||||||||  |||||||||||||||||| |||||||||||||||    
T  9905054 gagtcaaatcaaaagaggtagatgaagacctagaaaaactacaagagaaactattaa 9904998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 230
Target Start/End: Original strand, 29709821 - 29709861
Alignment:
Q  190 gaggtaggggaagacctagaaaaactataagagaaactatt 230  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  29709821 gaggtagaggaagacctagaaaaactataagagaaactatt 29709861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 141
Target Start/End: Complemental strand, 12491413 - 12491350
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    ||||||||||||||||  ||||||||| ||| ||||| || ||||||||||||| |||||||||    
T  12491413 cacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacc 12491350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 23023351 - 23023394
Alignment:
Q  192 ggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||    
T  23023351 ggtagaggaagacctagaaaaactataagagaaactactaagaa 23023394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 231
Target Start/End: Original strand, 32931055 - 32931126
Alignment:
Q  160 tagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    |||||||||| |||   ||||| ||||||||||| || |||||||||| ||||||||| |||||||||||||    
T  32931055 tagatcagatggaggatagtcatatcactagaggcagaggaagacctaaaaaaactatcagagaaactatta 32931126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 136
Target Start/End: Original strand, 2796527 - 2796622
Alignment:
Q  37 attagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgaga 136  Q
    ||||| ||||||| ||||||||||||||||    |||||  | ||||||||||||||  ||||||||| ||| ||||| || ||||||||||||| ||||    
T  2796527 attaggaatgacaccattagagagagagtg----ggggtagcgcctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagaga 2796622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 149
Target Start/End: Original strand, 12611523 - 12611613
Alignment:
Q  59 agagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggatt 149  Q
    |||||| ||||||| ||  |||||| ||||||||| ||||| |||||||| |||||||| |||| | ||||||  |||| |||||||||||    
T  12611523 agagagagagctggtgtagcacctaaagtagaaaagatggtggaaactaggcttaggtggtttgcgtatgtagacagaacacctgtggatt 12611613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 231
Target Start/End: Original strand, 28169515 - 28169557
Alignment:
Q  189 agaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    |||||||| |||||||||| |||||||||||||||||||||||    
T  28169515 agaggtagaggaagacctaaaaaaactataagagaaactatta 28169557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 30783388 - 30783155
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagag-agagtgagctggggtgaca-cctatagtagaaaaaatgg 98  Q
    ||||||||||| ||||| |||||||||  | |  | |||||||||||||||||||||| | |||| ||| |||| |  || ||||||||||||||| |||    
T  30783388 ttgcgttggatctgtggcaagactagataggataggattagaaatgacaacattagaggggagagagagttgggatagcaacctatagtagaaaaa-tgg 30783290  T
Q  99 tagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta-tatagtagatcagatagagaggagtcaaatcactagaggtagg 197  Q
    | |||||  | |||||||  ||||||| ||||| || ||||| ||| |||| |||| || || |||  |||| |||   ||||| ||||||||||| ||     
T  30783289 tggaaac--ggcttaggttgtttgggcttgtagagaaaagacatgtagattttgtagtaaag-agagtagatggaggatagtcagatcactagaggcaga 30783193  T
Q  198 ggaagacctagaaaaactataagagaaactattaagaa 235  Q
    |||||| |||| ||||| ||||||||||||||| ||||    
T  30783192 ggaagatctagtaaaaccataagagaaactatttagaa 30783155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 39946791 - 39946930
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||||||| |||||||||||||||   |  | ||||  ||||||| ||||| ||| ||||||    |||||  ||||||||||||||||  |||||    
T  39946791 ttgcgttggatgagtggtaagactagacatgataggattatgaatgacaccattatagaaagagtg----ggggtagcacctatagtagaaaagttggta 39946886  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacctgt 144  Q
    |||| ||| ||||| || ||||| |||||||  |||||||||||    
T  39946887 gaaaataggcttagatggtttggacatgtagaaagaagacctgt 39946930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 41444506 - 41444453
Alignment:
Q  184 tcactagaggtaggggaagacctagaaaaa--ctataagagaaactattaagaa 235  Q
    |||||||||| || ||||||||||||||||  ||||||||||||||||||||||    
T  41444506 tcactagaggcagaggaagacctagaaaaaaactataagagaaactattaagaa 41444453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 231
Target Start/End: Original strand, 9070092 - 9070153
Alignment:
Q  170 agagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    |||||| |||||||| ||||||   ||| ||||||||||||||||||||||| |||||||||    
T  9070092 agagagtagtcaaataactagatacaggtgaagacctagaaaaactataagaaaaactatta 9070153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 229
Target Start/End: Original strand, 16917198 - 16917346
Alignment:
Q  85 agtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtat-----atagtagatcagatagagaggagt 179  Q
    ||||||||| |||||  ||||||| |||||||| ||||||||||||  |||||| | ||| |||| ||||      | |||||||||||| |||   |||    
T  16917198 agtagaaaagatggtgcaaactaggcttaggtggtttgggcatgtaaagagaaggcttgtagatt-tgtagtaaggagagtagatcagattgaggatagt 16917296  T
Q  180 caaatcactagaggtaggggaagacctagaaaaactataagagaaactat 229  Q
    |||||||||| ||||||  |||||||||||||| ||||| | ||||||||    
T  16917297 caaatcactacaggtagaagaagacctagaaaagctataggtgaaactat 16917346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 235
Target Start/End: Complemental strand, 17491804 - 17491767
Alignment:
Q  198 ggaagacctagaaaaactataagagaaactattaagaa 235  Q
    |||||||||||||||||| |||||||||||||||||||    
T  17491804 ggaagacctagaaaaactgtaagagaaactattaagaa 17491767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 36069581 - 36069638
Alignment:
Q  5 gttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagag 62  Q
    |||||||||||||||||||||||||| |    |||||||| |||||||||||||||||    
T  36069581 gttggatgtgtggtaagactagacgggataagattagaaacgacaacattagagagag 36069638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 18474235 - 18474159
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta 154  Q
    |||||||||||||||  ||||| |||||||| ||||| || |||| |||||||| |||||||| | || ||||||||    
T  18474235 cacctatagtagaaatgatggtggaaactaggcttagttggtttgagcatgtagagagaagacatctgaattctgta 18474159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 36143372 - 36143448
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta 154  Q
    ||||||||| |||| | ||||| |||| |||||||||||| ||||||||| ||| || ||||||| | |||||||||    
T  36143372 cacctatagcagaatagatggtggaaaatagacttaggtggtttgggcatttagagaaaagacctatagattctgta 36143448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 229
Target Start/End: Original strand, 43733330 - 43733370
Alignment:
Q  189 agaggtaggggaagacctagaaaaactataagagaaactat 229  Q
    |||||||| ||||||||||||||||||| ||||||||||||    
T  43733330 agaggtagaggaagacctagaaaaactacaagagaaactat 43733370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 117
Target Start/End: Original strand, 7103277 - 7103316
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtg 117  Q
    |||||||||||||||| |||||||||||||| ||||||||    
T  7103277 cacctatagtagaaaagatggtagaaactaggcttaggtg 7103316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 16971921 - 16971866
Alignment:
Q  181 aaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    ||||||||||| | | ||||| || ||||||||||||||||||||| |||||||||    
T  16971921 aaatcactagatgcacgggaaaacttagaaaaactataagagaaacgattaagaag 16971866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 24399960 - 24399901
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    |||||||| |||||||| || | || || |||||||| ||||||||||||||||||||||    
T  24399960 agtcaaattactagaggcagagcaaaacttagaaaaattataagagaaactattaagaag 24399901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 232
Target Start/End: Complemental strand, 33827916 - 33827873
Alignment:
Q  189 agaggtaggggaagacctagaaaaactataagagaaactattaa 232  Q
    ||||||| |||||||| || ||||||||||||||||||||||||    
T  33827916 agaggtacgggaagacgtataaaaactataagagaaactattaa 33827873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 204 - 235
Target Start/End: Complemental strand, 39967643 - 39967612
Alignment:
Q  204 cctagaaaaactataagagaaactattaagaa 235  Q
    ||||||||||||||||||||||||||||||||    
T  39967643 cctagaaaaactataagagaaactattaagaa 39967612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 231
Target Start/End: Original strand, 13589602 - 13589644
Alignment:
Q  189 agaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    ||||||||  |||||| ||||||||||||||||||||||||||    
T  13589602 agaggtagatgaagacttagaaaaactataagagaaactatta 13589644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 236
Target Start/End: Original strand, 16715365 - 16715443
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    |||||||||||| | ||| |||||||||||||| || || ||||| ||||||||   |||||||||||| || ||||||    
T  16715365 agtagatcagatggggagtagtcaaatcactagtggcagaggaaggcctagaaagtttataagagaaaccatcaagaag 16715443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 30198429 - 30198379
Alignment:
Q  185 cactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||||||| || || |||| |||||||||||||||||||| |||||||||    
T  30198429 cactagaggcagaggtagacttagaaaaactataagagaaattattaagaa 30198379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 231
Target Start/End: Original strand, 33511355 - 33511520
Alignment:
Q  70 tggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgt-----atatagtagat 164  Q
    |||||| |||||||| |||||||||||| |  ||| |||||||||||| |||| | ||  || |||||||||| | ||||||||     | | |||||||    
T  33511355 tggggtaacacctatggtagaaaaaatgatgaaaaatagacttaggtggtttgagtatacagagagaagacctatagattctgtagttaagagagtagat 33511454  T
Q  165 cagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    ||  | ||||  ||||| ||||| ||||| || | |||| ||| |||||||||||||||||||||||    
T  33511455 caattggaga-tagtcagatcaccagaggcagagcaagatctaaaaaaactataagagaaactatta 33511520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 35362821 - 35362767
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    ||||||||| ||| ||| || ||||||||||||||||||||  ||||||||||||    
T  35362821 agtcaaatccctataggcagaggaagacctagaaaaactatcggagaaactatta 35362767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 140
Target Start/End: Complemental strand, 35643872 - 35643814
Alignment:
Q  82 tatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagac 140  Q
    |||||||||||| ||||| |||| ||  |||||||| ||||||||||||| ||||||||    
T  35643872 tatagtagaaaagatggtggaaaatatgcttaggtggtttgggcatgtagagagaagac 35643814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 35914772 - 35914718
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    ||||| ||| ||||||  || ||||||| ||||||||||||||||||||||||||    
T  35914772 agtcagatccctagagacagaggaagacatagaaaaactataagagaaactatta 35914718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 226
Target Start/End: Complemental strand, 43904853 - 43904787
Alignment:
Q  160 tagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaac 226  Q
    |||||||||| |||   |||||||| || |||||||  |||||||||||||| ||||||||||||||    
T  43904853 tagatcagatggaggatagtcaaattacaagaggtacaggaagacctagaaatactataagagaaac 43904787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 141
Target Start/End: Original strand, 18125145 - 18125243
Alignment:
Q  37 attagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgaga 136  Q
    ||||||||||||| |||||||||||| |      |||||  ||||||||||||||||  ||||||||| ||| ||||| || ||||  ||||||| ||||    
T  18125145 attagaaatgacaccattagagagagtg------ggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgaacatgtagagaga 18125238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 27037747 - 27037800
Alignment:
Q  178 gtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    ||||||||||||| ||||| | ||||||||| ||||||||| || |||||||||    
T  27037747 gtcaaatcactagtggtagagaaagacctagtaaaactatacgataaactatta 27037800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 235
Target Start/End: Complemental strand, 38392043 - 38392006
Alignment:
Q  198 ggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  38392043 ggaagacctagaaaaactatatgagaaaccattaagaa 38392006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 131
Target Start/End: Complemental strand, 41444601 - 41444548
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtag 131  Q
    |||||||||||||||| ||||| ||||||||  ||||||| ||||| |||||||    
T  41444601 cacctatagtagaaaagatggtggaaactaggtttaggtggtttggacatgtag 41444548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 42493589 - 42493536
Alignment:
Q  70 tggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgg 123  Q
    |||||| ||||||||||||||||| || || |||||||| |||||||| |||||    
T  42493589 tggggtaacacctatagtagaaaagattgtggaaactaggcttaggtggtttgg 42493536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 141
Target Start/End: Complemental strand, 11524036 - 11523935
Alignment:
Q  37 attagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagac-ttaggtgatttgggcatgtagtgag 135  Q
    ||||| ||||||| ||||||||||||||||    |||||  ||||||||||||||||  ||||||  | ||| | |||| || ||||||||||||| |||    
T  11524036 attaggaatgacaccattagagagagagtg----ggggtagcacctatagtagaaaagttggtagttaataggctttagatggtttgggcatgtagagag 11523941  T
Q  136 aagacc 141  Q
    ||||||    
T  11523940 aagacc 11523935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 230
Target Start/End: Original strand, 14903693 - 14903725
Alignment:
Q  198 ggaagacctagaaaaactataagagaaactatt 230  Q
    |||||||||||||||||||||||||| ||||||    
T  14903693 ggaagacctagaaaaactataagagagactatt 14903725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 21121105 - 21121157
Alignment:
Q  14 gtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtg 66  Q
    ||||||||||||||||| |  | |||||||||| || ||||||||||||||||    
T  21121105 gtggtaagactagacgggataggattagaaatggcaccattagagagagagtg 21121157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 231
Target Start/End: Complemental strand, 28269827 - 28269795
Alignment:
Q  199 gaagacctagaaaaactataagagaaactatta 231  Q
    ||||||||||||||| |||||||||||||||||    
T  28269827 gaagacctagaaaaattataagagaaactatta 28269795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 231
Target Start/End: Complemental strand, 30456439 - 30456411
Alignment:
Q  203 acctagaaaaactataagagaaactatta 231  Q
    |||||||||||||||||||||||||||||    
T  30456439 acctagaaaaactataagagaaactatta 30456411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 30812976 - 30812928
Alignment:
Q  188 tagaggtaggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    |||||||||||| ||||||||||||||||||  ||||||| ||| ||||    
T  30812976 tagaggtaggggtagacctagaaaaactatacaagaaactgttaggaag 30812928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 97; Significance: 9e-48; HSPs: 76)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 16 - 236
Target Start/End: Original strand, 2712897 - 2713114
Alignment:
Q  16 ggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttagg 115  Q
    |||||||||||||||    ||||||||||||||||||| ||||||         ||||||  ||||||||||  |||| |||||||| ||||||||||||    
T  2712897 ggtaagactagacggggtagaattagaaatgacaacatcagagagt--------tggggtagcacctatagtctaaaagatggtagagactagacttagg 2712988  T
Q  116 tgatttgggcatgtagtgagaagacctgtggattctgtat-----atagtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaa 210  Q
    || ||||||||||||| |||||||||||||||||||||||     | |||||||||||| |||  |||||||||||||||||  ||||||||||||||||    
T  2712989 tggtttgggcatgtagagagaagacctgtggattctgtatgaaggagagtagatcagatggaggagagtcaaatcactagagtcaggggaagacctagaa 2713088  T
Q  211 aaactataagagaaactattaagaag 236  Q
    ||||||||||||||||||||||||||    
T  2713089 aaactataagagaaactattaagaag 2713114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 9 - 228
Target Start/End: Complemental strand, 10083079 - 10082865
Alignment:
Q  9 gatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactag 108  Q
    |||||||||||||||||||||| |  ||||||||||||| |||||||| |||||  |    ||||||  |||||||||||||||| ||||||||||||||    
T  10083079 gatgtgtggtaagactagacgggatagaattagaaatgagaacattagggagagcat----tggggtatcacctatagtagaaaagatggtagaaactag 10082984  T
Q  109 acttaggtgatttgggcatgtagtgagaagacctgtggattctgta-tatagtagatcagatagagaggagtcaaatcactagaggtaggggaagaccta 207  Q
    ||||| ||| ||| ||||||||| |||||||| ||||||||||||| || || |||  |||| ||| ||||||||||||| |||| ||||| ||||||||    
T  10082983 acttaagtggtttcggcatgtagagagaagacttgtggattctgtagtaaag-agagtagat-gaggggagtcaaatcaccagagatagggtaagaccta 10082886  T
Q  208 gaaaaactataagagaaacta 228  Q
    |||||||||||||||||||||    
T  10082885 gaaaaactataagagaaacta 10082865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 37 - 236
Target Start/End: Original strand, 14749277 - 14749477
Alignment:
Q  37 attagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgaga 136  Q
    ||||||||||| |||||||||||||||||    ||| ||  ||||||||||||||||| ||||||||||||||||||| || ||||| ||||||| ||||    
T  14749277 attagaaatgaaaacattagagagagagt----tggtgtagcacctatagtagaaaaattggtagaaactagacttagatggtttggacatgtagagaga 14749372  T
Q  137 agacctgtggattctgt-----atatagtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    |||||||||||||||||       | ||| |||||||| ||| ||||||||||||||| ||| || |||||||||||||||||||||||||||||||| |    
T  14749373 agacctgtggattctgttgtaaggagagtcgatcagatggaggggagtcaaatcactaaaggcagaggaagacctagaaaaactataagagaaactatca 14749472  T
Q  232 agaag 236  Q
    |||||    
T  14749473 agaag 14749477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 11002769 - 11002538
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    ||||| ||||||||||||||||| ||| || |  ||||||||||||||||||||||||||||       | ||||  |||||| ||||||||| ||||||    
T  11002769 ttgcgctggatgtgtggtaagacgagatgggatagaattagaaatgacaacattagagagagt------tcgggtagcacctacagtagaaaacatggta 11002676  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtatat-------agtagatcagatagagaggagtcaaatcactagagg 193  Q
    ||||||||||||||||| |||||||||||||  |||||| ||||||| ||||||  |       ||||||||||||  || ||||||| |||||||||||    
T  11002675 gaaactagacttaggtggtttgggcatgtaggtagaagatctgtggactctgtagttttaggggagtagatcagatgtaggggagtcagatcactagagg 11002576  T
Q  194 taggggaagacctagaaaaactataagagaaactatta 231  Q
    | |||| ||||||||||||||||||||| |||||||||    
T  11002575 ttggggtagacctagaaaaactataagacaaactatta 11002538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 6 - 236
Target Start/End: Complemental strand, 31636261 - 31636032
Alignment:
Q  6 ttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaac 105  Q
    |||||| |||||||||||||||| | |  |||||| |||||||| ||||||||| ||       ||||||  |||||||||||||||| |||||||||||    
T  31636261 ttggatttgtggtaagactagactggatagaattataaatgacagcattagagaaagt------tggggtagcacctatagtagaaaagatggtagaaac 31636168  T
Q  106 tagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta-----tatagtagatcagatagagaggagtcaaatcactagaggtagggga 200  Q
    |||||||||||| ||||||||||||| ||||||||| ||||||  ||||      | ||||||| |||| | | |||||||||||||||||| |||||||    
T  31636167 tagacttaggtggtttgggcatgtagagagaagacccgtggatgttgtagtaaggagagtagattagatggtggggagtcaaatcactagagatagggga 31636068  T
Q  201 agacctagaaaaactataagagaaactattaagaag 236  Q
    ||| ||||||||||||| ||||||||||| ||||||    
T  31636067 agatctagaaaaactattagagaaactatcaagaag 31636032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 21952285 - 21952525
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacac----ctatagtagaaaaaat 96  Q
    |||||||| ||||||||||||||||||||  |    ||||||||||||| ||||| |||||||| |   |||||| ||||    ||||||||||||| ||    
T  21952285 ttgcgttgcatgtgtggtaagactagacgagataagattagaaatgacagcattaaagagagagggt--tggggtaacacacacctatagtagaaaagat 21952382  T
Q  97 ggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtatatag-----tagatcagatagagaggagtcaaatcactaga 191  Q
    || |||||||||||| ||||| ||||| ||||||| |||||| |||||||||||| ||   ||     |||||||||| ||| |||||||||||||||||    
T  21952383 ggcagaaactagactcaggtggtttggacatgtagagagaagtcctgtggattctatagtaaggagaatagatcagatggaggggagtcaaatcactaga 21952482  T
Q  192 ggtaggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    ||||||||||||||||||||||||||  ||||||||||| |||||    
T  21952483 ggtaggggaagacctagaaaaactat--gagaaactattgagaag 21952525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 36 - 236
Target Start/End: Original strand, 1525606 - 1525814
Alignment:
Q  36 aattagaaatgacaacattagagagagagt---gagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagt 132  Q
    ||||||||||||| ||||||||||||||||   ||  |||| |  ||||||| |||||||| |||||||||||||||||||||||  |||| |||||||     
T  1525606 aattagaaatgacgacattagagagagagttgggaattgggataccacctattgtagaaaagatggtagaaactagacttaggtggcttggacatgtaga 1525705  T
Q  133 gagaagacctgtggattctgtatatag-----tagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaact 227  Q
    ||||||||| ||| |||||| |  |||     |||||||||| |||  |||||| ||||||||||||||||| |||||||||||||||| ||||||||||    
T  1525706 gagaagacccgtgaattctgcagttaggagagtagatcagatggaggagagtcagatcactagaggtaggggtagacctagaaaaactacaagagaaact 1525805  T
Q  228 attaagaag 236  Q
    |||| ||||    
T  1525806 attaggaag 1525814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 84 - 235
Target Start/End: Original strand, 42199299 - 42199455
Alignment:
Q  84 tagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta-----tatagtagatcagatagagaggag 178  Q
    |||||||||| ||||| ||||||||||||||||| ||||||||||||| |||||||| ||| |||||||||      | ||||||||| || ||||| ||    
T  42199299 tagtagaaaagatggtggaaactagacttaggtggtttgggcatgtagagagaagacatgtagattctgtagtaaggagagtagatcacatggagagtag 42199398  T
Q  179 tcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    |||||||||||| || || | |||||||||||||||||| ||| |||||||| ||||    
T  42199399 tcaaatcactagggggagagaaagacctagaaaaactattagacaaactatttagaa 42199455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 149
Target Start/End: Original strand, 33667161 - 33667294
Alignment:
Q  10 atgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactaga 109  Q
    |||| |||||||| ||||| | |  |||||||||||||||||||||  |||||       ||||||  |||||||||||||||| |||||||||||||||    
T  33667161 atgtttggtaagagtagacagtagagaattagaaatgacaacattaacgagagt------tggggtagcacctatagtagaaaagatggtagaaactaga 33667254  T
Q  110 cttaggtgatttgggcatgtagtgagaagacctgtggatt 149  Q
    |||||||| ||||||||||||| |||||||||||||||||    
T  33667255 cttaggtggtttgggcatgtagagagaagacctgtggatt 33667294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 90 - 236
Target Start/End: Complemental strand, 38578784 - 38578633
Alignment:
Q  90 aaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtatatag-----tagatcagatagagaggagtcaaat 184  Q
    |||| ||||||||||||| ||||||||| |||| |||||||  |||||||| ||| |||| | ||  |||     |||||||||| |||  |||||||||    
T  38578784 aaaagatggtagaaactaaacttaggtggtttgagcatgtaaagagaagacatgtagattatatagttagcagattagatcagatcgaggagagtcaaat 38578685  T
Q  185 cactagaggtaggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    ||||||| ||||||| |||||||||||||||| |||||||||||||| ||||    
T  38578684 cactagatgtaggggtagacctagaaaaactacaagagaaactattatgaag 38578633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 37065536 - 37065612
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta 154  Q
    |||||||||||||||| |||||||||||||||||| ||| |||||||||||||| |||||||  |||||||||||||    
T  37065536 cacctatagtagaaaagatggtagaaactagacttgggtcatttgggcatgtagagagaagaaatgtggattctgta 37065612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 235
Target Start/End: Complemental strand, 7359573 - 7359373
Alignment:
Q  35 gaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtga 134  Q
    ||||||||||||||||  |||||||||||||    |  ||| ||||||||||||||||| ||||| |||| |||  ||||||| ||||| ||||||| ||    
T  7359573 gaattagaaatgacaatgttagagagagagt----tcaggtaacacctatagtagaaaatatggtggaaaataggtttaggtggtttgg-catgtagaga 7359479  T
Q  135 gaagacctgtggattctgtat-----atagtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactat 229  Q
    |||||  ||| |||||||||      | |||||||||||| |||   ||||| ||||||||||| || ||||  ||||||||||| ||||||||||||||    
T  7359478 gaagatatgtagattctgtagtaaggagagtagatcagatggaggatagtcatatcactagaggcagaggaaagcctagaaaaaccataagagaaactat 7359379  T
Q  230 taagaa 235  Q
    | ||||    
T  7359378 ttagaa 7359373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 72 - 224
Target Start/End: Original strand, 18698801 - 18698952
Alignment:
Q  72 gggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtatatagtagatcagatag 171  Q
    |||| |||||||||||| |||| ||| | |||||||| ||||||||||||| || ||||| || |||||| || ||||  | | |   || ||||||| |    
T  18698801 gggtaacacctatagta-aaaagatgatggaaactaggcttaggtgatttgagcgtgtagagaaaagacccgtagattaaggagagtatatatcagatgg 18698899  T
Q  172 agaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaa 224  Q
    |||| ||||||||||||||||| || |||| ||||||||||||||||||||||    
T  18698900 agagtagtcaaatcactagaggcagaggaatacctagaaaaactataagagaa 18698952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 2075822 - 2075686
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||||||| || ||||||||||||   |  | ||||| ||||||||||||||||||||||||    ||||| ||||||| |||||||||  |||||    
T  2075822 ttgcgttggatgagttgtaagactagacaagataggattaggaatgacaacattagagagagagtg----ggggtaacacctacagtagaaaagttggta 2075727  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    || | ||| ||||| || ||||||||||||| |||||||||    
T  2075726 gacaataggcttagatggtttgggcatgtagagagaagacc 2075686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 14667695 - 14667816
Alignment:
Q  5 gttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagc--tggggtgacacctatagtagaaaaaatggtaga 102  Q
    |||||||||||| |||||||||| |     |||||||||||||||| ||||||||||||| |||   ||||||  |||||||||||||||| ||||| ||    
T  14667695 gttggatgtgtgataagactagatgaggtagaattagaaatgacaatattagagagagagagagagttggggtagcacctatagtagaaaagatggtgga 14667794  T
Q  103 aactagacttaggtgatttggg 124  Q
    || |||||||||||| ||||||    
T  14667795 aaatagacttaggtggtttggg 14667816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 178 - 236
Target Start/End: Original strand, 33667547 - 33667605
Alignment:
Q  178 gtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||    
T  33667547 gtcaaatcactagatgtaggggaagacctagaaaaactataagagaagttattaagaag 33667605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 235
Target Start/End: Complemental strand, 15489766 - 15489605
Alignment:
Q  79 acctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtat-----atagtagatcagatagag 173  Q
    |||||| |||||||| ||||| ||||||   ||||| || ||||||||||||| |||||||  ||| |||| |||||     | ||||||| |||| |||    
T  15489766 acctattgtagaaaagatggttgaaactcagcttagatggtttgggcatgtagagagaagatttgtagattttgtattaaggagagtagattagatggag 15489667  T
Q  174 aggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
       |||  |||||||||||| || ||||||||||||||||| ||||||||||||||||||||    
T  15489666 gatagttgaatcactagaggcagaggaagacctagaaaaacaataagagaaactattaagaa 15489605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 154
Target Start/End: Complemental strand, 36123467 - 36123391
Alignment:
Q  77 acacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta 154  Q
    |||||||| ||||||||| ||||||||||| |||||||||||||||||||||||| |||||||| ||| |||| ||||    
T  36123467 acacctattgtagaaaaa-tggtagaaactcgacttaggtgatttgggcatgtagagagaagacgtgttgattttgta 36123391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 78 - 149
Target Start/End: Complemental strand, 18351183 - 18351111
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggca-tgtagtgagaagacctgtggatt 149  Q
    |||||||||||||||| |||||||||||||| |||||||| |||||||| ||||| |||||||||||| ||||    
T  18351183 cacctatagtagaaaatatggtagaaactaggcttaggtggtttgggcattgtagagagaagacctgtagatt 18351111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 1275199 - 1275332
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||||||| |||||||||||||||      | ||||| ||||||| ||||||||||||||||     ||||  ||||||||||||||||  |||||    
T  1275199 ttgcgttggatgagtggtaagactagacatggtaggattaggaatgacaccattagagagagagtg-----gggtagcacctatagtagaaaagttggta 1275293  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaaga 139  Q
    |||| ||| ||||| || ||||||||||||| |||||||    
T  1275294 gaaaataggcttagatggtttgggcatgtagagagaaga 1275332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 3775238 - 3775180
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||| |||||||||||||    
T  3775238 agtcaaatcactagaggcagaagaagacctagaaaaactataagataaactattaagaa 3775180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 4496316 - 4496454
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacgga--accgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatgg 98  Q
    |||||||||||| |||||||||||||||  |  |  | ||||| ||||||| | ||||||||||||||    |||||  ||||||||||||||||  |||    
T  4496316 ttgcgttggatgagtggtaagactagacacaggataggattaggaatgacacctttagagagagagtg----ggggtagcacctatagtagaaaagctgg 4496411  T
Q  99 tagaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    |||||| ||| ||||| || ||||||||||||| |||||||||    
T  4496412 tagaaaataggcttagatggtttgggcatgtagagagaagacc 4496454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 6859492 - 6859546
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    ||||||| ||||||||| || ||||||||||||||||||||||||||||||||||    
T  6859492 agtcaaaccactagaggaagaggaagacctagaaaaactataagagaaactatta 6859546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 7678414 - 7678647
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagag-agagtgagctggggtgaca-cctatagtagaaaaaatgg 98  Q
    ||||||||||| ||||| |||||||||  | |  | |||||||||||||||||||||| | |||| ||| |||| |  || ||||||||||||||| |||    
T  7678414 ttgcgttggatctgtggcaagactagataggataggattagaaatgacaacattagaggggagagagagttgggatagcaacctatagtagaaaaa-tgg 7678512  T
Q  99 tagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtatatagtagatcagatagagaggagtcaaatcactagaggtaggg 198  Q
    | |||||  | |||||||  ||||||| ||||| || ||||| ||| |||||||||   || |||  |||| |||   ||||| ||||||||||| || |    
T  7678513 tggaaac--ggcttaggttgtttgggcttgtagagaaaagacatgtagattctgtagtaaggagagtagatggaggatagtcagatcactagaggcagag 7678610  T
Q  199 gaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||| |||| ||||| ||||||||||||||| ||||    
T  7678611 gaagatctagtaaaaccataagagaaactatttagaa 7678647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 12577050 - 12576973
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    |||||||||||| ||| | ||||  ||||||||||| || ||||||||||||||||||| |||| |||||||||||||    
T  12577050 agtagatcagatggagggtagtcctatcactagaggcagaggaagacctagaaaaactacaagataaactattaagaa 12576973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 231
Target Start/End: Complemental strand, 12492732 - 12492501
Alignment:
Q  4 cgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacaccta---tagtagaaaaaatggta 100  Q
    ||||||||| ||||||||||||||| | |    ||||| ||||||| ||||||||||||||||    |||||  ||||||   ||||||||||  |||||    
T  12492732 cgttggatgagtggtaagactagacaggataagattaggaatgacaccattagagagagagtg----ggggtagcacctactatagtagaaaagttggta 12492637  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtat-----atagtagatcagatagagaggagtcaaatcactagaggta 195  Q
    |||| ||| ||||| || ||||||||||||| ||||||||| || ||| | || |     | ||||||||| || |||  ||||||| | |  |||||||    
T  12492636 gaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtgttaagaagagtagatcaaatggaggagagtcaagttaaaagaggta 12492537  T
Q  196 ggggaagacctagaaaaactataagagaaactatta 231  Q
    | ||||||||||| |||||||| |||||||| ||||    
T  12492536 gaggaagacctaggaaaactattagagaaaccatta 12492501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 141
Target Start/End: Original strand, 14665680 - 14665784
Alignment:
Q  37 attagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgaga 136  Q
    ||||||||||||| |||||||||||||| |||  |||||  ||||||||||||| ||  || |||||| ||| ||||| || ||||| ||||||| ||||    
T  14665680 attagaaatgacaccattagagagagagagagtgggggtagcacctatagtagagaagttgatagaaaataggcttagatggtttggacatgtagagaga 14665779  T
Q  137 agacc 141  Q
    |||||    
T  14665780 agacc 14665784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 5305550 - 5305613
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagag 64  Q
    ||||||||||||||||||||||||||||   |  ||||||||||| ||||||||||||||||||    
T  5305550 ttgcgttggatgtgtggtaagactagacaagatagaattagaaataacaacattagagagagag 5305613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 10639231 - 10639377
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacac-------ctatagtagaaaa 93  Q
    |||||||||||| ||||||||||||||| |||  | ||||| ||||||| ||||||||||||||||    ||| |  |||       |||||||||||||    
T  10639231 ttgcgttggatgagtggtaagactagacagaataggattaggaatgacaccattagagagagagtg----gggctagcacctatagactatagtagaaaa 10639326  T
Q  94 aatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgt 144  Q
      ||||||||| ||| ||||| ||| |||||||||||| ||||||||||||    
T  10639327 gttggtagaaaataggcttagatgaattgggcatgtagagagaagacctgt 10639377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 24178444 - 24178580
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||||||| |||||||||||| ||   |  | ||||  ||||||| ||||||||||||||||    |||||  ||||||||||||||||  |||||    
T  24178444 ttgcgttggatgagtggtaagactatacatgataggattaagaatgacaccattagagagagagtg----ggggtagcacctatagtagaaaagttggta 24178539  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    |||| ||| ||||| || ||||||||||| | |||||||||    
T  24178540 gaaaataggcttagatggtttgggcatgtggagagaagacc 24178580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 231
Target Start/End: Original strand, 32516496 - 32516720
Alignment:
Q  5 gttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaa 104  Q
    |||||||||||||||||||||||| | |  || ||||||||||||||||||||||      ||| ||| || |||| |||||||||||| ||||| ||||    
T  32516496 gttggatgtgtggtaagactagacaggatagacttagaaatgacaacattagaga------gagttggagtaacacttatagtagaaaagatggtggaaa 32516589  T
Q  105 ctagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta-tat----agtagatcagatagagaggagtcaaatcactagaggtagggg 199  Q
     ||| |||||||| ||| | | ||||  || || || ||| ||||||||| |||    |||||||| |||  ||   | ||| || || |||||||| ||    
T  32516590 ataggcttaggtggtttagacttgtaaagaaaatacatgtagattctgtagtatggagagtagatcggatgaaggataatcagattacaagaggtagagg 32516689  T
Q  200 aagacctagaaaaactataagagaaactatta 231  Q
    |||||||| |||||||||||||||||||||||    
T  32516690 aagaccta-aaaaactataagagaaactatta 32516720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 37 - 141
Target Start/End: Original strand, 38684937 - 38685037
Alignment:
Q  37 attagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgaga 136  Q
    ||||| ||||||| ||||||||||||||||    |||||  ||||||||||||||||  ||||||||| ||| ||||| || ||||| ||||||| ||||    
T  38684937 attaggaatgacaccattagagagagagtg----ggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagaga 38685032  T
Q  137 agacc 141  Q
    |||||    
T  38685033 agacc 38685037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 1287937 - 1287792
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagct------ggggtgacacctatagtagaaaaa 94  Q
    |||||||||||| |||||||||||||||   |  | ||||| ||||||| |||||||||||||| |||        |||||  ||||||||||||||||     
T  1287937 ttgcgttggatgagtggtaagactagacatgataggattaggaatgacatcattagagagagagagagagagagtgggggtagcacctatagtagaaaag 1287838  T
Q  95 atggtagaaactagacttaggtgatttgggcatgtagtgagaagac 140  Q
     ||||||||| ||| ||||| || ||||||||||||| ||||||||    
T  1287837 ttggtagaaaataggcttagatggtttgggcatgtagagagaagac 1287792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 235
Target Start/End: Original strand, 38684487 - 38684649
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtat-----atagtagatcagataga 172  Q
    ||||||||||| || | ||||| ||||||| |||||  || |||  |||||||| ||||||||||||| ||||| ||      | |||| || |||| ||    
T  38684487 cacctatagtataatagatggtggaaactaaacttaaatggtttcagcatgtagagagaagacctgtgtattctatagtaaggagagtatattagatgga 38684586  T
Q  173 gaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    | ||| || |||||||||| |||  ||||||||||||||||||| |||||||||| |||||||    
T  38684587 ggggattccaatcactagatgtaaaggaagacctagaaaaactacaagagaaacttttaagaa 38684649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 42199485 - 42199562
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||||||| || ||||| |||||||||||||| || || | |||||||||||||||||| ||| |||||||| ||||    
T  42199485 agtagatcacatggagagtagtcaaatcactagggggagagaaagacctagaaaaactattagacaaactatttagaa 42199562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 175 - 235
Target Start/End: Complemental strand, 15369969 - 15369910
Alignment:
Q  175 ggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||||| ||||||||||||| || | |||||||||||| |||||||||||||||||||||    
T  15369969 ggagtcatatcactagaggtatggta-gacctagaaaaagtataagagaaactattaagaa 15369910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 29922409 - 29922453
Alignment:
Q  191 aggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    |||||| |||||| |||||||||||||||||||||||||||||||    
T  29922409 aggtagaggaagatctagaaaaactataagagaaactattaagaa 29922453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 55 - 143
Target Start/End: Original strand, 34273011 - 34273099
Alignment:
Q  55 agagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctg 143  Q
    |||||||||| |||  |||||  |||||||| |||||||  ||||||||| ||| ||||| || ||||||||||||| |||||||||||    
T  34273011 agagagagagagagtgggggtagcacctataatagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacctg 34273099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 231
Target Start/End: Original strand, 27992 - 28047
Alignment:
Q  176 gagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    |||||| ||||  |||||| | ||||||||||||||||||||||||||||||||||    
T  27992 gagtcagatcaaaagaggttgaggaagacctagaaaaactataagagaaactatta 28047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 9235003 - 9235062
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagag 60  Q
    |||| ||||||||||||||||||||||||| |  | |||| |||||||||||||||||||    
T  9235003 ttgcattggatgtgtggtaagactagacgggataggattataaatgacaacattagagag 9235062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 16347726 - 16347590
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||||||| |||||||||||||||   |    |||| |||||| | |||||||||||||| |    |||||  ||||||||||||||||  |||||    
T  16347726 ttgcgttggatgagtggtaagactagacaatatatgattaaaaatgaaaccattagagagagagcg----ggggtagcacctatagtagaaaagttggta 16347631  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    |||| ||| ||||| || ||||| ||||||| |||||||||    
T  16347630 gaaaataggcttagatggtttggacatgtagagagaagacc 16347590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 27998567 - 27998610
Alignment:
Q  192 ggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||    
T  27998567 ggtagaggaagacctagaaaaactataagagaaactactaagaa 27998610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 183 - 229
Target Start/End: Original strand, 5305756 - 5305802
Alignment:
Q  183 atcactagaggtaggggaagacctagaaaaactataagagaaactat 229  Q
    ||||||||||| || ||||||||||||||||||||| ||||||||||    
T  5305756 atcactagaggcagaggaagacctagaaaaactatatgagaaactat 5305802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 6889104 - 6889158
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    ||||||| |||| |||| || ||||| ||||||||||||||||||||||||||||    
T  6889104 agtcaaaccacttgaggaagaggaaggcctagaaaaactataagagaaactatta 6889158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 38341591 - 38341537
Alignment:
Q  182 aatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    ||||||||||| |||  |||||| ||||| |||||||||||||||||||||||||    
T  38341591 aatcactagagttagatgaagacttagaagaactataagagaaactattaagaag 38341537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 144
Target Start/End: Original strand, 43475247 - 43475313
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgt 144  Q
    |||||||||||||||| ||||| |||||||| |||||||| |||||| ||  || ||||||||||||    
T  43475247 cacctatagtagaaaagatggtggaaactaggcttaggtggtttgggtattcagagagaagacctgt 43475313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 9235166 - 9235216
Alignment:
Q  183 atcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||||||||| || |||||||||||||||||  |||||||||||||||||||    
T  9235166 atcactagaggcagaggaagacctagaaaaac--taagagaaactattaagaa 9235216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 131
Target Start/End: Complemental strand, 21193907 - 21193862
Alignment:
Q  86 gtagaaaaaatggtagaaactagacttaggtgatttgggcatgtag 131  Q
    ||||| || ||||| |||||||||||||||||||||||||||||||    
T  21193907 gtagagaatatggtggaaactagacttaggtgatttgggcatgtag 21193862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 142
Target Start/End: Original strand, 28676605 - 28676666
Alignment:
Q  81 ctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacct 142  Q
    ||||||||||||| ||||| |||| ||| |||||||| ||| ||||||||| ||||||||||    
T  28676605 ctatagtagaaaagatggtggaaaatagtcttaggtggtttcggcatgtagagagaagacct 28676666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 684033 - 683977
Alignment:
Q  8 ggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagag 64  Q
    |||||||||||||||||||| |  |  |||||||||||||||| |||||||||||||    
T  684033 ggatgtgtggtaagactagatgagatagaattagaaatgacaatattagagagagag 683977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 1001331 - 1001295
Alignment:
Q  199 gaagacctagaaaaactataagagaaactattaagaa 235  Q
    |||||||||||||||||||||| ||||||||||||||    
T  1001331 gaagacctagaaaaactataagtgaaactattaagaa 1001295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 3775314 - 3775278
Alignment:
Q  199 gaagacctagaaaaactataagagaaactattaagaa 235  Q
    |||||||||||||||||||||||||||||| ||||||    
T  3775314 gaagacctagaaaaactataagagaaactactaagaa 3775278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 140
Target Start/End: Complemental strand, 43558133 - 43558040
Alignment:
Q  45 tgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagac 140  Q
    |||||||||||||||||||  ||| | ||||  || ||||| ||||||| ||||| |||||||  |||||||| ||||||||| ||| ||||||||    
T  43558133 tgacaacattagagagaga--gagttagggtagcatctataatagaaaagatggtggaaactaagcttaggtggtttgggcatatagagagaagac 43558040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 154
Target Start/End: Original strand, 79521 - 79596
Alignment:
Q  79 acctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta 154  Q
    ||||||||||||||| ||||| ||||  | | ||||||| ||||| ||||||| |||||||||| | |||||||||    
T  79521 acctatagtagaaaagatggtggaaaacataattaggtggtttggacatgtagagagaagacctatagattctgta 79596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 141
Target Start/End: Original strand, 3301814 - 3301914
Alignment:
Q  37 attagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgaga 136  Q
    ||||| |||| || ||||||||||||||||||    |||  | ||||||||||||||  ||||||||| ||| ||||| || ||||| ||||||| ||||    
T  3301814 attaggaatgtcaccattagagagagagtgag----ggtagcccctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagaga 3301909  T
Q  137 agacc 141  Q
    |||||    
T  3301910 agacc 3301914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 141
Target Start/End: Complemental strand, 28977134 - 28977071
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    ||||||||||||||||  ||||||||| ||| ||||| || |||| |||||||| |||||||||    
T  28977134 cacctatagtagaaaagttggtagaaaataggcttagatggtttgtgcatgtagagagaagacc 28977071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 116
Target Start/End: Original strand, 3097172 - 3097218
Alignment:
Q  70 tggggtgacacctatagtagaaaaaatggtagaaactagacttaggt 116  Q
    |||||| ||||||||| ||||||| ||| ||||||||||||||||||    
T  3097172 tggggtaacacctatattagaaaagatgctagaaactagacttaggt 3097218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 9917621 - 9917563
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||||||||| ||||  || ||| |||||||||||||||| |||||||||||| ||||    
T  9917621 agtcaaatcacaagagacagaggatgacctagaaaaactattagagaaactatttagaa 9917563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 21093710 - 21093768
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagaga 59  Q
    |||||||| |||||||||||||||||| |  |  |||||||||||||||| ||||||||    
T  21093710 ttgcgttgtatgtgtggtaagactagatgtgatggaattagaaatgacaatattagaga 21093768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 236
Target Start/End: Complemental strand, 34734655 - 34734508
Alignment:
Q  95 atggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtatat-------agtagatcagatagagaggagtcaaatcac 187  Q
    ||||||||||||||||| || || ||||| ||||||| ||||||| ||||| ||| |||| ||       | ||||||| ||  || ||||||| |||||    
T  34734655 atggtagaaactagactaagatggtttgg-catgtagagagaagatctgtgaattatgtagattaaggagaatagatcaaatgaaggggagtcagatcac 34734557  T
Q  188 tagaggtaggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    | |||||| ||| ||| |||||||||||||| || ||||||||| ||||    
T  34734556 tggaggtacgggtagatctagaaaaactatacgataaactattatgaag 34734508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 6368273 - 6368220
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacatt 54  Q
    ||||||| |||||||||||||| ||||||  |  ||||||||||||||||||||    
T  6368273 ttgcgttagatgtgtggtaagaatagacgagatagaattagaaatgacaacatt 6368220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 6788179 - 6788232
Alignment:
Q  178 gtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    |||| ||||||||||| || |||||||||||||||||||| | || ||||||||    
T  6788179 gtcagatcactagaggcagaggaagacctagaaaaactatcaaaggaactatta 6788232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 206 - 235
Target Start/End: Original strand, 11753144 - 11753173
Alignment:
Q  206 tagaaaaactataagagaaactattaagaa 235  Q
    ||||||||||||||||||||||||||||||    
T  11753144 tagaaaaactataagagaaactattaagaa 11753173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 139
Target Start/End: Complemental strand, 15370074 - 15370006
Alignment:
Q  70 tggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaaga 139  Q
    |||||| ||||| |||||| |||| ||||||||||||| ||||| |||||||| | |||||| |||||||    
T  15370074 tggggtaacaccaatagtataaaagatggtagaaactatacttaagtgatttgag-atgtagagagaaga 15370006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 231
Target Start/End: Complemental strand, 15588534 - 15588505
Alignment:
Q  202 gacctagaaaaactataagagaaactatta 231  Q
    ||||||||||||||||||||||||||||||    
T  15588534 gacctagaaaaactataagagaaactatta 15588505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 124
Target Start/End: Complemental strand, 15588814 - 15588769
Alignment:
Q  79 acctatagtagaaaaaatggtagaaactagacttaggtgatttggg 124  Q
    |||||||| |||||| ||||| |||||||| |||||||||||||||    
T  15588814 acctatagaagaaaagatggtggaaactaggcttaggtgatttggg 15588769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 232
Target Start/End: Original strand, 17213179 - 17213240
Alignment:
Q  171 gagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaa 232  Q
    |||||||| |||||||||||| || || ||| || ||||||||||| |||| ||||||||||    
T  17213179 gagaggagccaaatcactagatgtgggagaaaacttagaaaaactagaagaaaaactattaa 17213240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 235
Target Start/End: Original strand, 30588579 - 30588616
Alignment:
Q  198 ggaagacctagaaaaactataagagaaactattaagaa 235  Q
    |||||||||||||||||||||||||||| | |||||||    
T  30588579 ggaagacctagaaaaactataagagaaattgttaagaa 30588616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 41110089 - 41110028
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagag 62  Q
    ||||| ||||||||| || |||||||| ||||  | |||||||||||||||| |||||||||    
T  41110089 ttgcgctggatgtgtagtgagactagatggaataggattagaaatgacaacactagagagag 41110028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 154
Target Start/End: Original strand, 6859351 - 6859464
Alignment:
Q  37 attagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgaga 136  Q
    |||||||||||||| |||||| |||||||    ||||||  ||||||||||  | || ||||| ||||  || | |||||| ||||| || |||| ||||    
T  6859351 attagaaatgacaatattagacagagagt----tggggtagcacctatagtgaagaagatggtggaaaacaggcataggtggtttggacacgtagagaga 6859446  T
Q  137 agacctgtggattctgta 154  Q
    |||| |||||||||||||    
T  6859447 agacttgtggattctgta 6859464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 228
Target Start/End: Complemental strand, 8082113 - 8082073
Alignment:
Q  189 agaggtaggggaagacctagaaaaactat-aagagaaacta 228  Q
    |||||||| |||||||||||||||||||| |||||||||||    
T  8082113 agaggtagaggaagacctagaaaaactataaagagaaacta 8082073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 8492508 - 8492456
Alignment:
Q  176 gagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaacta 228  Q
    |||| |||||||| |||||||| ||| | |||||||||||||||| |||||||    
T  8492508 gagttaaatcacttgaggtaggagaaaagctagaaaaactataagggaaacta 8492456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 14667888 - 14667940
Alignment:
Q  183 atcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||||||||| || ||||  ||||||||||||||||||||| ||| ||||||    
T  14667888 atcactagaggcagcggaaatcctagaaaaactataagagaagctactaagaa 14667940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 64
Target Start/End: Original strand, 27998402 - 27998430
Alignment:
Q  36 aattagaaatgacaacattagagagagag 64  Q
    |||||||||||||||||||||||||||||    
T  27998402 aattagaaatgacaacattagagagagag 27998430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 40938034 - 40938082
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaa 225  Q
    |||||||||  |||||| || |||||||||||||||| |||||||||||    
T  40938034 agtcaaatcgttagaggcagaggaagacctagaaaaaatataagagaaa 40938082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 43558162 - 43558134
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacg 29  Q
    |||||||||||||||||||||||||||||    
T  43558162 ttgcgttggatgtgtggtaagactagacg 43558134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 1e-43; HSPs: 110)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 35 - 236
Target Start/End: Original strand, 46371992 - 46372194
Alignment:
Q  35 gaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtga 134  Q
    |||||||||||||  |||||||||| |||||    ||||||  |||||||||| ||||| || |||||||||||||||||||| |||| |||||||| ||    
T  46371992 gaattagaaatgatgacattagagatagagt----tggggtagcacctatagtcgaaaatattgtagaaactagacttaggtggtttgtgcatgtagaga 46372087  T
Q  135 gaagacctgtggattctgtat-----atagtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactat 229  Q
    |||||| |||||||||||||      | || ||||||||||||| |||| || ||||||||||||||||| |||||||||||||||||||||||||||||    
T  46372088 gaagacatgtggattctgtactaagaagagcagatcagatagaggggagccagatcactagaggtaggggtagacctagaaaaactataagagaaactat 46372187  T
Q  230 taagaag 236  Q
    || ||||    
T  46372188 taggaag 46372194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 55 - 234
Target Start/End: Complemental strand, 35555945 - 35555761
Alignment:
Q  55 agagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta 154  Q
    |||||||||| ||| | ||||  |||||||||||||||| ||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||    
T  35555945 agagagagagagagttcgggtagcacctatagtagaaaagatggtagaaactagacttaggtggtttgggcatttagagagaagacctgtggattctgta 35555846  T
Q  155 -----tatagtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 234  Q
          | ||||||| ||||||||  ||||    |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  35555845 gttaggagagtagattagatagaggagagttgggtcactagaggtaggggtagacctagaaaaactataagagaaactattaaga 35555761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 17900414 - 17900643
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    ||||||||||||||||||||||||||| || |   ||||||||||||| ||||||||||  ||||    ||||||  |||||||||||||||| | ||||    
T  17900414 ttgcgttggatgtgtggtaagactagatgggataaaattagaaatgacgacattagagacggagt----tggggtagcacctatagtagaaaagacggta 17900509  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtatat-----agtagatcagatagagaggagtcaaatcactagaggta 195  Q
    ||||||||||| | ||| |||||||| |||| ||||||||||||||||| |||| ||     |||||||||||| ||||||||||| |||| ||||||||    
T  17900510 gaaactagactcatgtggtttgggcacgtagagagaagacctgtggattatgtagataggagagtagatcagatggagaggagtcagatcattagaggta 17900609  T
Q  196 ggggaagacctagaaaaactataagagaaactat 229  Q
    ||||      |||||||||| |||||||||||||    
T  17900610 ggggtgtctgtagaaaaactttaagagaaactat 17900643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 35 - 236
Target Start/End: Complemental strand, 31897740 - 31897540
Alignment:
Q  35 gaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtga 134  Q
    |||||||||||||  |||||||||||| |||    ||||||  ||||||  |||||||| |||||||||||||||||| |||| |||| |||||||| ||    
T  31897740 gaattagaaatgaggacattagagagatagt----tggggtagcaccta--gtagaaaagatggtagaaactagacttgggtggtttgcgcatgtagaga 31897647  T
Q  135 gaagacctgtggattctgtatatagtaga-----tcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactat 229  Q
    | ||||||||||||||||||  ||| |||     | |||| ||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  31897646 gcagacctgtggattctgtagttaggagagtcgattagatggaggggagtcagatcactagaggtaggggtagacctagaaaaactataagagaaactat 31897547  T
Q  230 taagaag 236  Q
    || ||||    
T  31897546 taggaag 31897540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 77 - 236
Target Start/End: Original strand, 26356625 - 26356789
Alignment:
Q  77 acacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtat-----atagtagatcagatag 171  Q
    ||||||||||||||||| |||||||||| |||||||||||| ||||||||  ||| |||||||| ||||| |  ||||      | |||||||| ||| |    
T  26356625 acacctatagtagaaaagatggtagaaaatagacttaggtggtttgggcacttagagagaagacatgtgggtattgtagtaaggagagtagatcggatgg 26356724  T
Q  172 agaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  26356725 aggggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactgttatgaag 26356789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 6 - 236
Target Start/End: Original strand, 10208977 - 10209206
Alignment:
Q  6 ttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaac 105  Q
    |||||||||||||||||||||| || |  ||||||||||||||||||||||||||         ||||||   ||||||||||||||| |||| ||||||    
T  10208977 ttggatgtgtggtaagactagatgggatagaattagaaatgacaacattagagagt--------tggggtagaacctatagtagaaaagatggcagaaac 10209068  T
Q  106 tagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta-----tatagtagatcagatagagaggagtcaaatcactagaggta--ggg 198  Q
    || |||||| || ||||||||||||| ||||||||||||| ||| | ||      | |||||||||||| |||  |||||| || ||||| ||||  |||    
T  10209069 taaacttagttggtttgggcatgtagcgagaagacctgtgaattttttagtaaggagagtagatcagatggaggagagtcatatgactagtggtaggggg 10209168  T
Q  199 gaagacctagaaaaactataagagaaactattaagaag 236  Q
    | ||||||||||||||||||||||||||||||||||||    
T  10209169 ggagacctagaaaaactataagagaaactattaagaag 10209206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 104 - 231
Target Start/End: Complemental strand, 31961515 - 31961383
Alignment:
Q  104 actagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtatatagtaga-----tcagatagagaggagtcaaatcactagaggtaggg 198  Q
    ||||||||| |||| ||||||||||||| |||||||| |||||||||||||  ||| |||     | |||| ||||||||||||||||||||||||||||    
T  31961515 actagacttgggtggtttgggcatgtagagagaagacttgtggattctgtagttaggagagtggattagatggagaggagtcaaatcactagaggtaggg 31961416  T
Q  199 gaagacctagaaaaactataagagaaactatta 231  Q
    | |||||||||||||||||||||||||||||||    
T  31961415 gtagacctagaaaaactataagagaaactatta 31961383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 81 - 221
Target Start/End: Complemental strand, 42285972 - 42285828
Alignment:
Q  81 ctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtatatagtagatcaga----tagagagg 176  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||   || ||| ||||    | ||| ||    
T  42285972 ctatagtagaaaagatggtagaaactagacttaggtggtttgggcatgtatagagaagacctgtggattctgtagtcagaagagcagatcagtggagggg 42285873  T
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataaga 221  Q
    ||||| |||||||||||| |||| |||||||||||| ||||||||    
T  42285872 agtcagatcactagaggtgggggtagacctagaaaagctataaga 42285828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 54470141 - 54470373
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||| |||||||||||||||||||||| || |    ||| ||||| |||||||||||||||||||    ||||||  |||||||||||||||| |||||     
T  54470141 ttgcattggatgtgtggtaagactagatgggatatgatttgaaataacaacattagagagagagt----tggggtagcacctatagtagaaaagatggtg 54470236  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta-----tatagtagatcagatagagaggagtcaaatcactagaggta 195  Q
    ||||||||||||| ||| ||||||||||||| |||||||| |||  ||| ||||      | |||| |||| || ||||| |||||||| |||||||| |    
T  54470237 gaaactagacttaagtggtttgggcatgtagagagaagacatgtaaattatgtagtaaggagagtaaatcaaatggagagtagtcaaattactagaggca 54470336  T
Q  196 ggggaagacctagaaaaactataagagaaactattaa 232  Q
       ||||||| |||||||||||||||||| |||||||    
T  54470337 aaagaagaccaagaaaaactataagagaatctattaa 54470373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 41192768 - 41192919
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    ||||||||||||||||||| || ||||| | |   ||||| |||||||| | ||||||||||||  || ||||||  |||||| ||||||||| |||||     
T  41192768 ttgcgttggatgtgtggtatgattagacaggatacaattataaatgacagcgttagagagagag--agttggggtagcacctacagtagaaaagatggtg 41192865  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta 154  Q
    |||||||||||||||||||||| |||||||| |||||||||||| |||||||||    
T  41192866 gaaactagacttaggtgatttgtgcatgtagagagaagacctgtagattctgta 41192919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 236
Target Start/End: Original strand, 44360021 - 44360256
Alignment:
Q  5 gttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaa 104  Q
    ||||||||||||||| |||||| ||  |  |||||||||||||||| ||||||  ||||| ||| ||||||  |||||||||||||||| ||||||||||    
T  44360021 gttggatgtgtggtaggactaggcgagatagaattagaaatgacaatattagatggagagagagttggggtatcacctatagtagaaaagatggtagaaa 44360120  T
Q  105 ctagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta-----tatagtagatcagatagagaggagtcaaatcactagaggtagggg 199  Q
    ||||| ||||||  ||||||||||||| |||||||| ||||||   ||||      ||| ||||||| || ||| |||| ||||||||||| |   || |    
T  44360121 ctaga-ttaggttgtttgggcatgtagagagaagacatgtggacgatgtagtaaggataatagatcatatggaggggaggcaaatcactagtgcctggag 44360219  T
Q  200 aagacctagaaaaactataagagaaactattaagaag 236  Q
    ||||| |||||||||||| ||||||||| | ||||||    
T  44360220 aagacttagaaaaactattagagaaactgtcaagaag 44360256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 217
Target Start/End: Complemental strand, 25257923 - 25257713
Alignment:
Q  5 gttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaa 104  Q
    ||||||||||| ||||||||||||   |  ||||||||||||||||||||||||||||       || ||| ||||||| | || |||| |||||||||     
T  25257923 gttggatgtgtagtaagactagacatgatagaattagaaatgacaacattagagagagt------tgaggtaacacctacaatataaaagatggtagaag 25257830  T
Q  105 ctagacttaggtgatttgggcatgtagtgagaagacctgtggattctgt-----atatagtagatcagatagagaggagtcaaatcactagaggtagggg 199  Q
    ||||||||||||| |||| |||||||| ||||||||||||| || ||||       | |||||||||||| ||| |||  ||||||||||||||||||||    
T  25257829 ctagacttaggtggtttgagcatgtagagagaagacctgtgaatgctgttgtaaggagagtagatcagatggaggggacacaaatcactagaggtagggg 25257730  T
Q  200 aagacctagaaaaactat 217  Q
    |||||||| |||||||||    
T  25257729 aagaccta-aaaaactat 25257713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 2588915 - 2589120
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagc------tggggtgacacctatagtagaaaaa 94  Q
    ||||||||||||||||||||||||||| || |  | |||||||||||||||||||| ||| ||| |||       ||||||   ||||||||| |||||     
T  2588915 ttgcgttggatgtgtggtaagactagaagggataggattagaaatgacaacattagggagggagggagggagggttggggtagtacctatagt-gaaaag 2589013  T
Q  95 atggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta-----tatagtagatcagatagagaggagtcaaatcacta 189  Q
    ||||||||||||||||||||||| ||| ||||||||| ||||| || |||||||||||||      | |||||||||||| ||| ||||| |||| ||||    
T  2589014 atggtagaaactagacttaggtggtttaggcatgtagagagaaaacttgtggattctgtagttaggagagtagatcagatggaggggagttaaattacta 2589113  T
Q  190 gaggtag 196  Q
    |||||||    
T  2589114 gaggtag 2589120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 31960162 - 31959931
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||||||| ||||||||||||||| | |  | ||||| ||||||| ||||||||||||||||    |||||  ||||||||||||||||  |||||    
T  31960162 ttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccattagagagagagtg----ggggtagcacctatagtagaaaagttggta 31960067  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgt-----atatagtagatcagatagagaggagtcaaatcactagaggta 195  Q
    |||| ||| ||||| || ||||||||||||| ||||||||| || ||| | ||       | ||||||||| || |||  ||||||| | |  |||||||    
T  31960066 gaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggagagtcaagttaaaagaggta 31959967  T
Q  196 ggggaagacctagaaaaactataagagaaactatta 231  Q
    | ||||||||||| |||||||| |||||||||||||    
T  31959966 gaggaagacctaggaaaactattagagaaactatta 31959931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 33709853 - 33710092
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacg-----gaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaa 95  Q
    ||||||||||||||||||||||||||||      | |  | |||||||||| ||||||||||||||||||    |||||| ||||||||||||||||| |    
T  33709853 ttgcgttggatgtgtggtaagactagacatgataggataggattagaaatggcaacattagagagagagt----tggggtaacacctatagtagaaaaga 33709948  T
Q  96 tggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgt-----atatagtagatcagatagagaggagtcaaatcactag 190  Q
    |||| ||||||||  ||||||| ||| ||||||| | ||||||| |||||||||||||     | | ||| |||||||  ||| | ||||| ||||||||    
T  33709949 tggtggaaactaggtttaggtggtttaggcatgtggagagaagaactgtggattctgtagtaaagagagtggatcagaaggagggtagtcagatcactag 33710048  T
Q  191 aggtaggggaagacctagaaaaactataagagaaactattaaga 234  Q
    ||  |||||||  | || |||||| ||| |||||||||||||||    
T  33710049 agacaggggaatgcttataaaaaccatacgagaaactattaaga 33710092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 48174441 - 48174305
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||||||| |||||||||||||||   |    ||||| ||||||| ||||||||||||||||    ||||| |||||||||||||||||  |||||    
T  48174441 ttgcgttggatgagtggtaagactagacatgatatgattaggaatgacaccattagagagagagtg----ggggtaacacctatagtagaaaagttggta 48174346  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    |||| ||| ||||| |||||||||||||||| |||||||||    
T  48174345 gaaaataggcttagatgatttgggcatgtagagagaagacc 48174305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 78 - 235
Target Start/End: Complemental strand, 42639295 - 42639133
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtatatag-----tagatcagataga 172  Q
    |||||||||||||||| ||||| ||||| || |||||||| ||||| ||||||| |||||||| | ||||||||||    ||     || || |||| ||    
T  42639295 cacctatagtagaaaagatggtggaaaccaggcttaggtggtttggacatgtagagagaagacttatggattctgtggtaaggggggtaaattagatgga 42639196  T
Q  173 gaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    | |||||||||||||||||||||| |||| | |||||||||||  ||||||||||||||||||    
T  42639195 ggggagtcaaatcactagaggtagaggaatatctagaaaaactgcaagagaaactattaagaa 42639133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 228
Target Start/End: Original strand, 50471538 - 50471688
Alignment:
Q  83 atagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtat-----atagtagatcagatagagagga 177  Q
    ||||||||||| ||||| ||||||||  ||| ||| ||||||||||||| ||||||||||||| ||||| |||     | |||||| || || |||||||    
T  50471538 atagtagaaaagatggtggaaactaggtttaagtggtttgggcatgtagagagaagacctgtgaattctatattaaggagagtagaccatatggagagga 50471637  T
Q  178 gtcaaatcactagaggtaggggaagacctagaaaaactataagagaaacta 228  Q
    || |||| ||||||||| | |||| ||||||||| ||||||||||||||||    
T  50471638 gttaaattactagaggtggtggaaaacctagaaagactataagagaaacta 50471688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 82 - 232
Target Start/End: Complemental strand, 1427555 - 1427400
Alignment:
Q  82 tatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtat-----atagtagatcagatagagagg 176  Q
    |||||||||||| ||||| |||||||| ||||| || |||| |||||||| |||| |||||||||||| |||       | ||||||||| | |  | ||    
T  1427555 tatagtagaaaacatggtggaaactaggcttagatggtttgagcatgtagagagaggacctgtggattttgtggtaaggagagtagatcatacaaggggg 1427456  T
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaa 232  Q
    ||||||||||||||||||||||||||| ||| ||||||||||| ||||||| ||||    
T  1427455 agtcaaatcactagaggtaggggaagatctataaaaactataaaagaaactcttaa 1427400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 44047662 - 44047550
Alignment:
Q  35 gaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtga 134  Q
    |||||||||||||||||||||||||||||||    ||||||  ||||||||||||||||  |||||||| |||| |||||||| ||||| ||||||| |     
T  44047662 gaattagaaatgacaacattagagagagagt----tggggtagcacctatagtagaaaaggtggtagaatctaggcttaggtggtttggacatgtagagt 44047567  T
Q  135 gaagacctgtggattct 151  Q
     ||||||||| ||||||    
T  44047566 taagacctgtagattct 44047550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 436163 - 436302
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||||||| || ||||||||||||   |  | ||||  ||||||| ||||||||||||||||    |||||  ||||||||||||||||  |||||    
T  436163 ttgcgttggatgagtcgtaagactagacatgataggattaagaatgacaccattagagagagagtg----ggggtagcacctatagtagaaaagttggta 436258  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacctgt 144  Q
    |||| ||| ||||| |||||||||||||||| ||||||||||||    
T  436259 gaaaataggcttagatgatttgggcatgtagagagaagacctgt 436302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 117
Target Start/End: Complemental strand, 10775736 - 10775658
Alignment:
Q  35 gaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtg 117  Q
    |||||||||||||||||||||||||||| ||    |||||| ||||||||||||||||| |||||||||||||||| ||||||    
T  10775736 gaattagaaatgacaacattagagagagtgt----tggggtaacacctatagtagaaaagatggtagaaactagacataggtg 10775658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 151
Target Start/End: Complemental strand, 51252799 - 51252663
Alignment:
Q  9 gatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactag 108  Q
    ||||||| |||||||||||||  |  | |||||||||||| |||||||||||||       ||||||  ||||| |||||||||| ||||| ||||||||    
T  51252799 gatgtgtcgtaagactagacgagataggattagaaatgactacattagagagagt------tggggtagcacctctagtagaaaagatggtggaaactag 51252706  T
Q  109 acttaggtgatttgggcatgtagtgagaagacctgtggattct 151  Q
     |||||||| | ||||||||||| |||||||| ||||||||||    
T  51252705 gcttaggtggtatgggcatgtagagagaagacatgtggattct 51252663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 52569859 - 52569727
Alignment:
Q  5 gttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaa 104  Q
    |||||||| | ||||||||||||| | |  | ||||| ||||||| ||||||||||||||||    |||||  ||||||||||||||||  |||||||||    
T  52569859 gttggatgaggggtaagactagacaggataggattaggaatgacaccattagagagagagtg----ggggtagcacctatagtagaaaagttggtagaaa 52569764  T
Q  105 ctagacttaggtgatttgggcatgtagtgagaagacc 141  Q
     ||| ||||| || ||||||||||||| |||||||||    
T  52569763 ataggcttagatggtttgggcatgtagagagaagacc 52569727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 143
Target Start/End: Complemental strand, 31403364 - 31403228
Alignment:
Q  5 gttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaa 104  Q
    |||| ||||||||| ||| ||||||| |  | ||||||||||||||||||||||| |||  ||| ||||||  ||||||||||||| |||||||| ||||    
T  31403364 gttgaatgtgtggtgagattagacgggataggattagaaatgacaacattagagacagatagagttggggtagcacctatagtaga-aaaatggtggaaa 31403266  T
Q  105 ctagacttaggtgatttgggcatgtagtgagaagacctg 143  Q
    |||| ||||||||  |||||||||||  ||||| |||||    
T  31403265 ctaggcttaggtg-gttgggcatgtaaagagaacacctg 31403228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 37 - 231
Target Start/End: Complemental strand, 33191160 - 33190965
Alignment:
Q  37 attagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgaga 136  Q
    ||||| ||||||| ||||||||||||||||    |||||  ||||||||||||||||  ||||||||| ||||||||| |  ||||||||||||| ||||    
T  33191160 attaggaatgacaccattagagagagagtg----ggggtagcacctatagtagaaaagttggtagaaaatagacttagattgtttgggcatgtagagaga 33191065  T
Q  137 agacctgtggattctgtat-----atagtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    ||||| || ||| | || |     |  |||||||| || |||| ||||||| | |  |||||||| ||||||||||| |||||||| |||||||| ||||    
T  33191064 agacccgtagatgccgtgttaagaagggtagatcaaatggagaagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccatta 33190965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 36 - 235
Target Start/End: Complemental strand, 40018503 - 40018302
Alignment:
Q  36 aattagaaatgacaacattagagagagagtgagc----tggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtag 131  Q
    |||||||||| |||||||||||||||||| |||     ||||||  ||||||| ||| |||| |||||||||||| | |||| ||| ||||||||||  |    
T  40018503 aattagaaat-acaacattagagagagagagagagaattggggtagcacctatcgtaaaaaagatggtagaaacttggcttatgtggtttgggcatgccg 40018405  T
Q  132 tgagaagacctgtggattctgtatatagtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
     |||||||| |||  ||||| ||  |||||||||||||  || | ||||||||||||||||| |    ||||| |||||||||||||||| ||||| |||    
T  40018404 agagaagacttgtatattctata-gtagtagatcagatgaagggtagtcaaatcactagaggcaaataaagacttagaaaaactataagaaaaactgtta 40018306  T
Q  232 agaa 235  Q
    ||||    
T  40018305 agaa 40018302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 177 - 235
Target Start/End: Original strand, 49987519 - 49987577
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    |||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  49987519 agtcaattcactagaggcagaggaagacctagaaaaactataagagaaactattaagaa 49987577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 51550502 - 51550360
Alignment:
Q  99 tagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta-----tatagtagatcagatagagaggagtcaaatcactagagg 193  Q
    |||| |||||||||||||| ||||||||||||| |||||||  |||||||||| ||      | ||| |||||||| ||| ||||||| ||||||| |||    
T  51550502 tagagactagacttaggtggtttgggcatgtagagagaagatatgtggattctctagcaaggagagttgatcagatggaggggagtcagatcactaaagg 51550403  T
Q  194 taggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    |||||| |||||| ||||||| ||||||||  |||||| ||||    
T  51550402 taggggtagacctggaaaaaccataagagatgctattaggaag 51550360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 219
Target Start/End: Complemental strand, 49738891 - 49738737
Alignment:
Q  66 gagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta-----tatagt 160  Q
    ||||||||||  ||||||| |||||||| |||||||||||| | ||||||||||||| || ||||  |||||||||  | |||| ||||      | |||    
T  49738891 gagctggggtagcacctattgtagaaaagatggtagaaactcggcttaggtgatttgagcgtgtaaagagaagacccatagattttgtactaaggagagt 49738792  T
Q  161 agatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataa 219  Q
    | |||||||||||| |||||||||||||||||| |    ||||||||||||||||||||    
T  49738791 aaatcagatagagatgagtcaaatcactagaggca----aagacctagaaaaactataa 49738737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 154
Target Start/End: Complemental strand, 46715678 - 46715571
Alignment:
Q  38 ttagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaa 137  Q
    ||||||||||||||||||||||||||| ||||         |||||| |||||||| ||||| |||||||| |||||||| | ||||||||||| |||||    
T  46715678 ttagaaatgacaacattagagagagagagagc---------acctattgtagaaaagatggtggaaactaggcttaggtggtgtgggcatgtagagagaa 46715588  T
Q  138 gacctgtggattctgta 154  Q
    ||| |||||||| ||||    
T  46715587 gacatgtggattatgta 46715571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 224
Target Start/End: Original strand, 31339519 - 31339693
Alignment:
Q  49 aacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggat 148  Q
    |||||||||||||||||    ||||||   |||||| ||||||||| |||| |||||||  |||||||| |||| |||||||| |||||||| ||| |||    
T  31339519 aacattagagagagagt----tggggtagaacctatggtagaaaaa-tggtcgaaactaagcttaggtggtttgagcatgtagagagaagacttgtagat 31339613  T
Q  149 tctgtat-----atagtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaa 224  Q
    | ||||      ||||||||||| ||  |||| |||||| |||||||||| || ||||||||||||||||||||| |||||    
T  31339614 tatgtagtaaggatagtagatcaaatgaagagtagtcaa-tcactagaggcagaggaagacctagaaaaactatatgagaa 31339693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 43433852 - 43433994
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagct--ggggtgacacctatagtagaaaaaatgg 98  Q
    |||||||||||| |||| ||||||||||   |  | ||||| ||||||| |||||||||||||| |||    |||||  ||||||||||||||||  |||    
T  43433852 ttgcgttggatgagtggcaagactagacaagataggattaggaatgacaccattagagagagagagagagtgggggtagcacctatagtagaaaagttgg 43433951  T
Q  99 tagaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    |||||| ||| ||||| || ||||||||||||| |||||||||    
T  43433952 tagaaaataggcttagatggtttgggcatgtagagagaagacc 43433994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 215
Target Start/End: Original strand, 29398825 - 29398967
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta-----tatagtagatcagataga 172  Q
    ||||||| |||||||| ||||| |||| ||  |||| ||| ||||||||||||| |||||||||| | |||||||||      | |||||| | ||||||    
T  29398825 cacctatggtagaaaagatggtggaaaatatgcttatgtggtttgggcatgtagagagaagacctatagattctgtagtgaggagagtagaccggataga 29398924  T
Q  173 gaggagtcaaatcactagaggtaggggaagacctagaaaaact 215  Q
    |   ||||||||||||||||| || ||||||||||||||||||    
T  29398925 ggatagtcaaatcactagaggcagaggaagacctagaaaaact 29398967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 7682100 - 7682023
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||||| |||| ||| | ||||| ||||||||||| || ||||||||| |||||||||||||||||||||| |||||    
T  7682100 agtagattagatggagggtagtcacatcactagaggcagaggaagacctggaaaaactataagagaaactatcaagaa 7682023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 47147465 - 47147542
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    |||| ||||||| ||||| ||||  ||||||||||| || |||||||||||||||||||||  |||||||||||||||    
T  47147465 agtaaatcagatggagagtagtcggatcactagaggcagaggaagacctagaaaaactatagaagaaactattaagaa 47147542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 150
Target Start/End: Complemental strand, 38571055 - 38570950
Alignment:
Q  41 gaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagac 140  Q
    |||||||||||||| |||||||||    ||||||   ||||||||||| |||| || || |||||||| |||||||| |||||||||||||  |||||||    
T  38571055 gaaatgacaacatttgagagagag----ctggggaagcacctatagtacaaaagatagtggaaactaggcttaggtggtttgggcatgtagaaagaagac 38570960  T
Q  141 ctgtggattc 150  Q
     |||||||||    
T  38570959 atgtggattc 38570950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 49738731 - 49738662
Alignment:
Q  163 atcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    |||||||||||| |||||||||||||||||| |    |||||||||||||||||||| | ||||||||||||||    
T  49738731 atcagatagagatgagtcaaatcactagaggca----aagacctagaaaaactataataaaaactattaagaag 49738662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 33227143 - 33227279
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    ||||| |||||| |||||||||||||||   |  | ||||  ||||||| ||||||||||||||||    |||||  ||||||||||||||||  |||||    
T  33227143 ttgcgctggatgagtggtaagactagacatgataggattaagaatgacaccattagagagagagtg----ggggtagcacctatagtagaaaagttggta 33227238  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    |||| ||| ||||| |  ||||||||||||| |||||||||    
T  33227239 gaaaataggcttagattgtttgggcatgtagagagaagacc 33227279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 37 - 130
Target Start/End: Original strand, 49987398 - 49987487
Alignment:
Q  37 attagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgta 130  Q
    ||||||||||||||||||||| |||||||   || |||| ||||||||||||||||| ||||| |||| ||| |||||||| ||||| ||||||    
T  49987398 attagaaatgacaacattagatagagagt---ct-gggtcacacctatagtagaaaagatggtggaaaataggcttaggtggtttggtcatgta 49987487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 154
Target Start/End: Original strand, 1380335 - 1380450
Alignment:
Q  35 gaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtga 134  Q
    |||||||||  ||||||||||||||||||||    |||| | |||||||  |||||||| ||| |||||||| | |||||||| |||||||| |||| ||    
T  1380335 gaattagaatggacaacattagagagagagt----tgggataacacctaccgtagaaaacatgatagaaactcggcttaggtggtttgggcacgtagaga 1380430  T
Q  135 gaagacctgtggattctgta 154  Q
    ||| |||||| |||| ||||    
T  1380431 gaaaacctgtagattttgta 1380450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 154
Target Start/End: Original strand, 28497458 - 28497572
Alignment:
Q  37 attagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgaga 136  Q
    ||||||||||||||||| ||||||||||  || ||||||  ||||| |||||||||| || || ||||  || |||||||| ||||||||||||| ||||    
T  28497458 attagaaatgacaacatcagagagagag--agttggggtagcacctttagtagaaaagattgtggaaaa-aggcttaggtggtttgggcatgtagagaga 28497554  T
Q  137 agacctgtggattctgta 154  Q
    |||| ||| |||| ||||    
T  28497555 agacttgtagattatgta 28497572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 231
Target Start/End: Original strand, 35690394 - 35690436
Alignment:
Q  189 agaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  35690394 agaggtagaggaagacctagaaaaactataagagaaactatta 35690436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 53540401 - 53540455
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    ||||| ||||||||||| || |||||||||||||||||||||||| |||||||||    
T  53540401 agtcagatcactagaggcagaggaagacctagaaaaactataagataaactatta 53540455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 235
Target Start/End: Complemental strand, 13805435 - 13805378
Alignment:
Q  178 gtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    |||| ||||||||||| || |||| ||||||||||||||||||||||||||| |||||    
T  13805435 gtcagatcactagaggcagaggaaaacctagaaaaactataagagaaactatgaagaa 13805378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 18966721 - 18966774
Alignment:
Q  182 aatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    |||||||||||||||  ||||||||| || ||||||||||||||||||||||||    
T  18966721 aatcactagaggtagaagaagacctaaaacaactataagagaaactattaagaa 18966774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 231
Target Start/End: Original strand, 21106926 - 21107157
Alignment:
Q  9 gatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactag 108  Q
    |||||||||||||||||||||  |  ||||||||||||||||||||| | | |||| ||| || |||   | ||||||||||||  || || |||| |||    
T  21106926 gatgtgtggtaagactagacgtgatagaattagaaatgacaacattatatatagagagagttgaggtagtatctatagtagaaaggatagttgaaaatag 21107025  T
Q  109 acttaggtgatttgggcatgtagtgagaa---gacctgtggattctgta-----tatagtagatc-agatagagaggagtcaaatcactagaggtagggg 199  Q
     |||||||  ||||||||| ||| |||||   ||| ||| |||| ||||      | ||| |||| |||| ||| | ||||| |||||| || | || ||    
T  21107026 gcttaggtagtttgggcatctagagagaagacgacttgtagattatgtagtaaggagagtggatcaagatggagggtagtcagatcactggatgcagcgg 21107125  T
Q  200 aagacctagaaaaactataagagaaactatta 231  Q
    ||||||||||||||||||||||||||||||||    
T  21107126 aagacctagaaaaactataagagaaactatta 21107157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 28351651 - 28351724
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    |||||||||||| |||   ||||| || || |||||||| | ||||||||||||||||||||||||||||||||    
T  28351651 agtagatcagatggaggatagtcagattacaagaggtagagaaagacctagaaaaactataagagaaactatta 28351724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 31459037 - 31459098
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaaga 139  Q
    |||||||||||||||| |||||||||| ||| |||||||| ||||||||||||  |||||||    
T  31459037 cacctatagtagaaaagatggtagaaaataggcttaggtggtttgggcatgtaaagagaaga 31459098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 139
Target Start/End: Original strand, 37797822 - 37797920
Alignment:
Q  37 attagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgaga 136  Q
    ||||||||||||| ||||||||||||||||    | |||  ||||||||||||||||  ||||||||| ||| ||||| || ||||| ||||||| ||||    
T  37797822 attagaaatgacaccattagagagagagtg----gaggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagaga 37797917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 38266076 - 38266197
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||||||||||||| |  |||||||| |   ||||||||| ||||||||||||||||||| ||| | ||||  |||||||| |||| |  |||||     
T  38266076 ttgcgttggatgtgtggtcattctagacgggataaaattagaaaagacaacattagagagagagagagttagggtagcacctataatagagaggatggtg 38266175  T
Q  101 gaaactagacttaggtgatttg 122  Q
    |||||||  |||||||| ||||    
T  38266176 gaaactaagcttaggtggtttg 38266197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 45569175 - 45569122
Alignment:
Q  182 aatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    |||||||||||| || |||||||||||||| | |||||||||||||||||||||    
T  45569175 aatcactagaggcagaggaagacctagaaacattataagagaaactattaagaa 45569122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 228
Target Start/End: Complemental strand, 53518563 - 53518443
Alignment:
Q  110 cttaggtgatttgggcatgtagtgagaagacctgtggattctgtat-----atagtagatcagatagagaggagtcaaatcactagaggtaggggaagac 204  Q
    |||||||| |||||| |||||| |||||||||||||||| |||||      | |||||||||||| |||||   ||||||||  |||||||| ||||| |    
T  53518563 cttaggtggtttgggtatgtagagagaagacctgtggatgctgtagtacgaagagtagatcagatggagag---tcaaatcagaagaggtagaggaaggc 53518467  T
Q  205 ctagaaaaactataagagaaacta 228  Q
    ||||||||||||| ||| ||||||    
T  53518466 ctagaaaaactatgagaaaaacta 53518443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 2557832 - 2557784
Alignment:
Q  188 tagaggtaggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    ||||||||| |||||| ||||||||||| ||||||||||||||||||||    
T  2557832 tagaggtagaggaagatctagaaaaactgtaagagaaactattaagaag 2557784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 8599090 - 8599054
Alignment:
Q  199 gaagacctagaaaaactataagagaaactattaagaa 235  Q
    |||||||||||||||||||||||||||||||||||||    
T  8599090 gaagacctagaaaaactataagagaaactattaagaa 8599054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 11389816 - 11389876
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactata 218  Q
    ||||||| |||| || || |||||||||||||||||||| ||||||| |||||||||||||    
T  11389816 agtagataagatggaaagtagtcaaatcactagaggtagaggaagacgtagaaaaactata 11389876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 12494684 - 12494793
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||||||| |||||||||||||||   |  | ||||| ||||||| ||||||||||||||||    |||||  ||||||||||||||||  |||||    
T  12494684 ttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtg----ggggtagcacctatagtagaaaagttggta 12494779  T
Q  101 gaaactagacttag 114  Q
    |||| ||| |||||    
T  12494780 gaaaataggcttag 12494793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 235
Target Start/End: Complemental strand, 42293442 - 42293378
Alignment:
Q  171 gagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||| ||||||||||||||||| |  ||| || ||| |||||||||||||||||||||||||||    
T  42293442 gagagtagtcaaatcactagaggcaaaggatgaactaaaaaaactataagagaaactattaagaa 42293378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 140
Target Start/End: Complemental strand, 47265508 - 47265415
Alignment:
Q  43 aatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagac 140  Q
    ||||||| ||||| ||||||||||    ||||| |||||||||||||||||  | ||||||| |||  |||| |||||||||||||||| ||||||||    
T  47265508 aatgacaccattatagagagagtg----ggggtaacacctatagtagaaaaggtagtagaaaataggtttagatgatttgggcatgtagagagaagac 47265415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 111
Target Start/End: Complemental strand, 6478982 - 6478910
Alignment:
Q  35 gaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagact 111  Q
    |||||||||||||  ||||||||| ||||||    ||||||| |||||||||||||||| |||||| ||||||||||    
T  6478982 gaattagaaatgatgacattagagtgagagt----tggggtggcacctatagtagaaaagatggtaaaaactagact 6478910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 42566349 - 42566408
Alignment:
Q  176 gagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    |||||| |||||||||||| | |||| ||||| |||||||| ||||||||||||||||||    
T  42566349 gagtcatatcactagaggttgaggaatacctaaaaaaactacaagagaaactattaagaa 42566408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 45423557 - 45423612
Alignment:
Q  5 gttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagag 60  Q
    ||||| |||||||||||||||||||| |  ||||||||||||||||||||| ||||    
T  45423557 gttggttgtgtggtaagactagacgggatagaattagaaatgacaacattatagag 45423612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 151
Target Start/End: Original strand, 50662393 - 50662468
Alignment:
Q  77 acacctatagtagaaaaaatggtagaaactagacttaggt-gatttgggcatgtagtgagaagacctgtggattct 151  Q
    ||||||||||||||||| ||||| |||| ||| ||||||| | ||||||||||||| |||||||| ||| ||||||    
T  50662393 acacctatagtagaaaagatggtggaaagtaggcttaggtggttttgggcatgtagagagaagacttgtagattct 50662468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 141
Target Start/End: Original strand, 53707801 - 53707864
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    ||||||||||||||||  ||||||||| ||| ||||| || ||||||||||||| |||||||||    
T  53707801 cacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacc 53707864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 231
Target Start/End: Original strand, 4440860 - 4441018
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgt-----atatagtagatcagataga 172  Q
    ||||||||||||||||  ||||||||| ||| ||||| || ||||||||| ||| ||||||||| || ||| ||||       | ||||||||| || ||    
T  4440860 cacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatctagagagaagacccgtagatgctgtggtaagaagagtagatcaaatgga 4440959  T
Q  173 gaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    |  ||||||| | |  |||||||| ||||||||||| |||||||| |||||||| ||||    
T  4440960 ggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccatta 4441018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 236
Target Start/End: Complemental strand, 6478873 - 6478795
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    |||||||||||| ||  ||||| | ||||| |||| |||||| |||||||||||||| | |||||||||||||| ||||    
T  6478873 agtagatcagatggaagggagttagatcaccagagctaggggtagacctagaaaaacgacaagagaaactattaggaag 6478795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 8459206 - 8459148
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||||||||||| ||| || |||||||||| |||||||| |||| |||||||||||||    
T  8459206 agtcaaatcactaaaggcagaggaagacctaaaaaaactaaaagataaactattaagaa 8459148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 23906649 - 23906508
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagct--ggggtgacacctatagtagaaaaaatgg 98  Q
    |||||||||||| |||| ||||||||||   |  | ||||| ||||||| |||||||||||||| |||    |||||  ||||||||||||||||  | |    
T  23906649 ttgcgttggatgagtggcaagactagacaagataggattaggaatgacaccattagagagagagagagagtgggggtagcacctatagtagaaaagtttg 23906550  T
Q  99 tagaaactagacttaggtgatttgggcatgtagtgagaagac 140  Q
    |||||| ||| ||||| || |||| |||||||| ||||||||    
T  23906549 tagaaaataggcttagatggtttgagcatgtagagagaagac 23906508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 235
Target Start/End: Original strand, 37488226 - 37488260
Alignment:
Q  201 agacctagaaaaactataagagaaactattaagaa 235  Q
    |||||||||||||||||||||||||||||||||||    
T  37488226 agacctagaaaaactataagagaaactattaagaa 37488260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 114 - 229
Target Start/End: Original strand, 42618922 - 42619038
Alignment:
Q  114 ggtgatttgggcatgtagtgagaagacctgtggattctgtat--atagtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaa 211  Q
    |||||||||| ||||||| |||||||| ||| |||| ||||   | ||||||||||||| |||| |||||||||||||| |  |  |||| |||||||||    
T  42618922 ggtgatttggccatgtagagagaagacttgtagattttgtagtgagagtagatcagatacagagtagtcaaatcactagggtcaaaggaaaacctagaaa 42619021  T
Q  212 aactataagagaaactat 229  Q
    |||| ||| |||||||||    
T  42619022 aactgtaa-agaaactat 42619038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 231
Target Start/End: Complemental strand, 45204998 - 45204956
Alignment:
Q  189 agaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    |||||| | ||||||||||||||||||||||||||||||||||    
T  45204998 agaggtggaggaagacctagaaaaactataagagaaactatta 45204956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 48033200 - 48033254
Alignment:
Q  181 aaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||||||||||| || ||||||| ||  ||||||||||||||||||||||||||    
T  48033200 aaatcactagaggcagaggaagacttaagaaaactataagagaaactattaagaa 48033254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 79 - 141
Target Start/End: Original strand, 50286970 - 50287032
Alignment:
Q  79 acctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    |||||||||||||||  ||||||||| ||||||| | || ||||||||||||| |||||||||    
T  50286970 acctatagtagaaaagttggtagaaaatagacttggatggtttgggcatgtagagagaagacc 50287032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 21945828 - 21945755
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    |||||||||||| |||   ||||| |||||||||||  | |||||||||||||||||||| | |||||||||||    
T  21945828 agtagatcagatggaggatagtcacatcactagaggctgaggaagacctagaaaaactatcatagaaactatta 21945755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 139
Target Start/End: Original strand, 30807601 - 30807658
Alignment:
Q  82 tatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaaga 139  Q
    |||||||||||| ||||||||||||| |||||||||||||| |||  ||| |||||||    
T  30807601 tatagtagaaaagatggtagaaactaaacttaggtgatttgagcacatagagagaaga 30807658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 137
Target Start/End: Complemental strand, 36557343 - 36557246
Alignment:
Q  35 gaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtga 134  Q
    |||||||||||||| | ||| ||||||||||    |||||   |||| ||||||||||| ||||||||||||||||||| ||| |||||| |||||| ||    
T  36557343 gaattagaaatgacgatattggagagagagt----tggggcagcacccatagtagaaaagatggtagaaactagactta-gtggtttgggaatgtagaga 36557249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 39708525 - 39708598
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    |||||||||||| |||  ||||||  |||  |||||||| ||||||||||| ||||||||||||||||| ||||    
T  39708525 agtagatcagatggaggagagtcaggtcaaaagaggtagaggaagacctaggaaaactataagagaaaccatta 39708598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 44667435 - 44667358
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||||||||||  | || ||||||||||||||||| ||  |||||||| |||||||||||  ||||||||| |||||    
T  44667435 agtagatcagatgtatagtagtcaaatcactagaggcagaagaagacctcgaaaaactatattagaaactatcaagaa 44667358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 45185361 - 45185304
Alignment:
Q  5 gttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagag 62  Q
    ||||||||||| ||||||||||| |  |  ||||||||||||||||||||||||||||    
T  45185361 gttggatgtgtagtaagactagatgagatagaattagaaatgacaacattagagagag 45185304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 48622889 - 48622755
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||| ||||||| |||||||||||||||   |  | ||||| ||||||| |||||||||||| |      |||||  |||| |||||||||||  |||||    
T  48622889 ttgctttggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagtg------ggggtagcacccatagtagaaaagttggta 48622796  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    |||| ||| ||||| || ||||||||||||| |||||||||    
T  48622795 gaaaataggcttagatggtttgggcatgtagagagaagacc 48622755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 51252619 - 51252566
Alignment:
Q  182 aatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||||||||||||| ||||||  |||||||||| ||| |||||||||||||||    
T  51252619 aatcactagaggtagaggaagagatagaaaaactgtaaaagaaactattaagaa 51252566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 227
Target Start/End: Complemental strand, 55809148 - 55809111
Alignment:
Q  190 gaggtaggggaagacctagaaaaactataagagaaact 227  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  55809148 gaggtagaggaagacctagaaaaactataagagaaact 55809111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 2589164 - 2589240
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 234  Q
    ||||||||| || ||| ||||| |||| ||||||||||| | | ||||||||||||  |||||||||||||| ||||    
T  2589164 agtagatcaaatggaggggagttaaattactagaggtagagcacgacctagaaaaagcataagagaaactatcaaga 2589240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 139
Target Start/End: Complemental strand, 30621498 - 30621418
Alignment:
Q  59 agagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaaga 139  Q
    |||||| ||| ||||||  ||| |||||||||||| ||||| |||| |||  |||||||||||||||| |||| |||||||    
T  30621498 agagagggagttggggtagcacttatagtagaaaagatggtggaaaataggtttaggtgatttgggcacgtagagagaaga 30621418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 34233194 - 34233142
Alignment:
Q  178 gtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatt 230  Q
    |||| ||||||||||| || |||| ||||||||||||||| ||||||||||||    
T  34233194 gtcagatcactagaggcagaggaaaacctagaaaaactatcagagaaactatt 34233142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 235
Target Start/End: Complemental strand, 44719541 - 44719477
Alignment:
Q  171 gagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||| ||| |||||| ||||||  | |||||||||||||||| ||||| |||||||||||||||    
T  44719541 gagagtagttaaatcattagaggctgaggaagacctagaaaaaatataaaagaaactattaagaa 44719477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 45184302 - 45184258
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataaga 221  Q
    |||| |||||| |||||||| ||||||||||||||||||||||||    
T  45184302 agtctaatcacaagaggtagaggaagacctagaaaaactataaga 45184258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 144
Target Start/End: Complemental strand, 45205192 - 45205054
Alignment:
Q  5 gttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaa 104  Q
    |||||||| ||||||||||||||||| |  | ||||| ||||||| |||||  ||||||||  |  |  |||   |||||||||||||| ||||||||||    
T  45205192 gttggatgagtggtaagactagacgggataggattaggaatgacaccattaacgagagagttgggggtagtg---cctatagtagaaaagatggtagaaa 45205096  T
Q  105 ctagac--ttaggtgatttgggcatgtagtgagaagacctgt 144  Q
     |||||  ||||||| |||| ||| |||| ||||||||||||    
T  45205095 atagacttttaggtggtttgtgcacgtagagagaagacctgt 45205054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 53517641 - 53517693
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactat 229  Q
    ||||| ||||||||||| || ||||||| |||||||||| |||||||||||||    
T  53517641 agtcagatcactagaggcagaggaagacttagaaaaactgtaagagaaactat 53517693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 230
Target Start/End: Complemental strand, 55805829 - 55805789
Alignment:
Q  190 gaggtaggggaagacctagaaaaactataagagaaactatt 230  Q
    ||||||| ||||||||| |||||||||||||||||||||||    
T  55805829 gaggtagtggaagacctggaaaaactataagagaaactatt 55805789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 934598 - 934544
Alignment:
Q  180 caaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    |||| ||||||||| || ||||||| |||||||||||| |||||||||||||||||    
T  934598 caaaacactagaggcagaggaagac-tagaaaaactattagagaaactattaagaa 934544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 43070108 - 43070053
Alignment:
Q  5 gttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagag 60  Q
    |||||||||||||||||| ||||| | |  | ||||||||||||||||||||||||    
T  43070108 gttggatgtgtggtaagattagacaggataggattagaaatgacaacattagagag 43070053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 51009278 - 51009223
Alignment:
Q  181 aaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    ||||||||||| || | |||||||| ||||||||| |||| |||||||||||||||    
T  51009278 aaatcactagacgtggaggaagaccgagaaaaactttaagggaaactattaagaag 51009223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 140
Target Start/End: Original strand, 28236190 - 28236252
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagac 140  Q
    ||||||||||||||||  |||| |||| ||| ||||| || ||||||||||||| ||||||||    
T  28236190 cacctatagtagaaaagttggtggaaaataggcttagatggtttgggcatgtagagagaagac 28236252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 30853454 - 30853508
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    ||||||||||| ||||| |  || |||| ||||||||||||||||||||||||||    
T  30853454 agtcaaatcacaagaggcaaagggagacttagaaaaactataagagaaactatta 30853508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 235
Target Start/End: Complemental strand, 33225984 - 33225946
Alignment:
Q  197 gggaagacctagaaaaactataagagaaactattaagaa 235  Q
    |||| |||||||||||| |||||||||||||||||||||    
T  33225984 gggatgacctagaaaaattataagagaaactattaagaa 33225946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 36556893 - 36556855
Alignment:
Q  201 agacctagaaaaactataagagaaactattaagaagtga 239  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  36556893 agacctagaaaaactatacgagaaactattaggaagtga 36556855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 38903888 - 38903831
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||||||  ||||||| ||  |||||||||||||| ||||||||||||||||||||||    
T  38903888 agtcaaatggctagaggcagatgaagacctagaaaa-ctataagagaaactattaagaa 38903831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 44860944 - 44860998
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    ||||||| ||||||||| |  ||||||||| ||||||||||||| ||||||||||    
T  44860944 agtcaaaacactagaggcaaaggaagaccttgaaaaactataagggaaactatta 44860998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 231
Target Start/End: Original strand, 51421853 - 51421895
Alignment:
Q  189 agaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    |||||||| ||||||  ||||||||||||||||||||||||||    
T  51421853 agaggtagaggaagatttagaaaaactataagagaaactatta 51421895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 227
Target Start/End: Original strand, 55028927 - 55028977
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaact 227  Q
    ||||||||||||||||| |  ||||||  ||||||||||||||||||||||    
T  55028927 agtcaaatcactagaggcataggaagagttagaaaaactataagagaaact 55028977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 55579142 - 55579196
Alignment:
Q  176 gagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatt 230  Q
    |||||||||||  ||||||||  ||||||||||||||||||||| | ||||||||    
T  55579142 gagtcaaatcaaaagaggtagaagaagacctagaaaaactataaaataaactatt 55579196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 232
Target Start/End: Original strand, 1793550 - 1793624
Alignment:
Q  156 atagtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaa 232  Q
    |||||||||||||| |||  |||||  ||||  |||||||| | ||||||| ||||||||||||||||||| |||||    
T  1793550 atagtagatcagatggag--gagtcgtatcaaaagaggtagagaaagacctcgaaaaactataagagaaaccattaa 1793624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 15662029 - 15661972
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 234  Q
    ||||| |||||||||| ||| || |||| | |||||||||||||||||| ||||||||    
T  15662029 agtcagatcactagagatagaggtagacttcgaaaaactataagagaaaatattaaga 15661972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #105
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 235
Target Start/End: Original strand, 20999132 - 20999169
Alignment:
Q  198 ggaagacctagaaaaactataagagaaactattaagaa 235  Q
    |||||||||||||||||||||| | |||||||||||||    
T  20999132 ggaagacctagaaaaactataatataaactattaagaa 20999169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #106
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 206 - 235
Target Start/End: Complemental strand, 21214728 - 21214699
Alignment:
Q  206 tagaaaaactataagagaaactattaagaa 235  Q
    ||||||||||||||||||||||||||||||    
T  21214728 tagaaaaactataagagaaactattaagaa 21214699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #107
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 37948491 - 37948568
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    |||||||||||||||| | ||||| ||  ||||||| ||  ||||||||||||||||| ||||  | |||||||||||    
T  37948491 agtagatcagatagagggtagtcagattgctagaggcagatgaagacctagaaaaactgtaagccatactattaagaa 37948568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #108
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 44686760 - 44686683
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||||||||||  | || ||| ||||||||||||| ||  |||||||| |||||||||||  ||||||||| |||||    
T  44686760 agtagatcagatgtatagtagttaaatcactagaggcagaagaagacctcgaaaaactatattagaaactatcaagaa 44686683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #109
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 142
Target Start/End: Original strand, 47611741 - 47611798
Alignment:
Q  85 agtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacct 142  Q
    ||||||||| ||| | |||| ||| |||||||| ||||||||||||| ||||||||||    
T  47611741 agtagaaaagatgatggaaaataggcttaggtggtttgggcatgtagagagaagacct 47611798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #110
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 50680857 - 50680909
Alignment:
Q  183 atcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||||| ||| || || ||||||||||||||||||||||||| |||| ||||    
T  50680857 atcactataggcagaggtagacctagaaaaactataagagaaattatttagaa 50680909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 5e-40; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 9594060 - 9593825
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtg--agctggggtgacacctatagtagaaaaaatgg 98  Q
    |||||||||||| ||||||||||||||||| |  | ||||| ||||||| |||||||||||||| |  || ||||||  ||||  |||||||||| ||||    
T  9594060 ttgcgttggatgagtggtaagactagacgggataggattaggaatgacaccattagagagagagagggagttggggtagcaccattagtagaaaagatgg 9593961  T
Q  99 tagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta-----tatagtagatcagatagagaggagtcaaatcactagagg 193  Q
    |||||| ||| |||||||| ||||||||||||| |||||||| ||| ||| |||||      | |||||||||||| |||  |||||||||||  |||||    
T  9593960 tagaaaataggcttaggtggtttgggcatgtagagagaagacatgtagatgctgtagtaagaagagtagatcagatggaggagagtcaaatca--agagg 9593863  T
Q  194 taggggaagacctagaaaaactataagagaaactatta 231  Q
    ||| |||||||||||||||| |||||||||||||||||    
T  9593862 tagaggaagacctagaaaaattataagagaaactatta 9593825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 10617574 - 10617346
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||||||||||| |||||||||||| ||  ||||||||||||||||     ||| ||||||    ||||||  ||| |||||||||||| | | ||    
T  10617574 ttgcgttggatgtgtgttaagactagacgaaatagaattagaaatgacaa-----gagcgagagt----tggggtagcacttatagtagaaaagacg-ta 10617485  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtatatagtaga---tcagatagagaggagtcaaatcactagaggtagg 197  Q
    ||||||||||||||||| |||| ||||||||  ||||||||||||| ||||| ||  || |||   ||| || ||| ||||||||||||||||||||||     
T  10617484 gaaactagacttaggtggtttgagcatgtagaaagaagacctgtggtttctgcattaaggagagtatcaaatggaggggagtcaaatcactagaggtaga 10617385  T
Q  198 ggaagacctagaaaaactataagagaaactattaagaag 236  Q
     ||| |||||||||||||||||||||||| |||||||||    
T  10617384 agaaaacctagaaaaactataagagaaaccattaagaag 10617346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 146
Target Start/End: Original strand, 33083993 - 33084133
Alignment:
Q  2 tgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtag 101  Q
    |||||||||||||||||||||||||| || |  |||||||||||||| | ||||||||||||||    ||||||  ||||||| |||||||| |||||||    
T  33083993 tgcgttggatgtgtggtaagactagatgggatagaattagaaatgacgatattagagagagagt----tggggtagcacctatggtagaaaagatggtag 33084088  T
Q  102 aaactagacttaggtgatttgggcatgtagtgagaagacctgtgg 146  Q
    |||||||||||||||| |||||| |||||| ||||||||||||||    
T  33084089 aaactagacttaggtggtttgggaatgtagagagaagacctgtgg 33084133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 78 - 231
Target Start/End: Original strand, 31818539 - 31818696
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtat-----atagtagatcagataga 172  Q
    ||||||||||| |||||||||| |||| |||||||||||| ||| | ||||  | |||||||||||| ||||||| |      | ||||||||| || ||    
T  31818539 cacctatagtacaaaaaatggtggaaaatagacttaggtggttttg-catgatgagagaagacctgttgattctgcagtaaggaaagtagatcatatgga 31818637  T
Q  173 gaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    | | ||| | ||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  31818638 gggtagtgagatcactaaaggtaggagaagacctagaaaaactataagagaaactatta 31818696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 5631756 - 5631892
Alignment:
Q  5 gttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaa 104  Q
    |||||||| ||||||||||||||| | |    ||||| ||||||| |||||||||||||| |||  ||||| |||||||||||||||||  |||||||||    
T  5631756 gttggatgagtggtaagactagaccggatatgattaggaatgacaccattagagagagagagagtgggggtaacacctatagtagaaaagttggtagaaa 5631855  T
Q  105 ctagacttaggtgatttgggcatgtagtgagaagacc 141  Q
     ||  ||||| || ||||| ||||||| |||||||||    
T  5631856 atatgcttagatggtttggacatgtagagagaagacc 5631892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 30031194 - 30031326
Alignment:
Q  5 gttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaa 104  Q
    |||||||| ||||||||||||||||| |  | |||||||||| || |||||||||| |||||    |||||  ||||||||||||||||  |||||||||    
T  30031194 gttggatgagtggtaagactagacgggataggattagaaatgtcaccattagagagggagtg----ggggtagcacctatagtagaaaagttggtagaaa 30031289  T
Q  105 ctagacttaggtgatttgggcatgtagtgagaagacc 141  Q
     ||| ||||| ||| |||| ||||||| |||||||||    
T  30031290 ataggcttagatgagttggacatgtagagagaagacc 30031326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 78 - 236
Target Start/End: Complemental strand, 7513666 - 7513501
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaaga-cctgtggattctgtatatagtaga-----tcagatag 171  Q
    |||||||| ||||||| ||||||||| ||||||||||||| |||||||||| |  ||||| | || ||||||| ||||   || |||     |||||| |    
T  7513666 cacctataatagaaaagatggtagaacctagacttaggtggtttgggcatgcaaagagaaaaacccgtggattatgtagtaagaagagtcaatcagattg 7513567  T
Q  172 agaggagtcaaatcactagaggtagggg-aagacctagaaaaactataagagaaactattaagaag 236  Q
    || ||||||||||||||||||| ||||| ||||||| || ||||||||||||||||| ||| ||||    
T  7513566 aggggagtcaaatcactagaggcagggggaagacctggataaactataagagaaacttttaggaag 7513501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 28085310 - 28085446
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||||||| |||||||||||||||   |  | ||||  ||||||| ||||||||||||||||    |||||  ||||||||||||||||  |||||    
T  28085310 ttgcgttggatgagtggtaagactagacatgataggattacgaatgacaccattagagagagagtg----ggggtagcacctatagtagaaaagttggta 28085405  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    |||| ||| ||||| || ||||| ||||||| |||||||||    
T  28085406 gaaaataggcttagatggtttggccatgtagagagaagacc 28085446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 144
Target Start/End: Complemental strand, 21352112 - 21352046
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgt 144  Q
    ||||||||||||||||| ||||||||| ||| ||||| |||||||| ||||||| ||||||||||||    
T  21352112 cacctatagtagaaaaattggtagaaaataggcttagatgatttggacatgtagagagaagacctgt 21352046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 149
Target Start/End: Original strand, 24665818 - 24665888
Alignment:
Q  79 acctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggatt 149  Q
    ||||||||||||||| |||||||||| ||| |||||||| ||||| ||||||| |||||||||||| ||||    
T  24665818 acctatagtagaaaatatggtagaaaataggcttaggtggtttggacatgtagagagaagacctgtagatt 24665888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 34670 - 34618
Alignment:
Q  183 atcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||||||||| || ||||||||||||||||||||||||||||| ||||||||    
T  34670 atcactagaggcagaggaagacctagaaaaactataagagaaaccattaagaa 34618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 3963895 - 3963953
Alignment:
Q  162 gatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataag 220  Q
    |||||||  ||| ||||||||||||| |||||||| |||||||||||||||||||||||    
T  3963895 gatcagaaggaggggagtcaaatcaccagaggtagaggaagacctagaaaaactataag 3963953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 5258498 - 5258351
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||||||| |||||||||||||||   |  | ||||  ||||||| | |||||||||||| | |  |||||  ||||||||||||||||  |||||    
T  5258498 ttgcgttggatgagtggtaagactagacaagataggattatgaatgacaccgttagagagagagagtg--ggggtagcacctatagtagaaaagttggta 5258401  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattc 150  Q
    |||| ||| ||||| || ||||| ||||||| ||||||||| || |||||    
T  5258400 gaaaataggcttagatggtttggacatgtagagagaagacccgtagattc 5258351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 33997715 - 33997657
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||||| ||||||||| || ||||||||| | ||||||||||||||||||||||||||    
T  33997715 agtcaaaacactagaggcagaggaagaccttggaaaactataagagaaactattaagaa 33997657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 127
Target Start/End: Complemental strand, 6641717 - 6641635
Alignment:
Q  41 gaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcat 127  Q
    |||||||||| |||||||| |||||    ||||||  |||||||||||||||| |||||||||||||||||| |||  |||||||||    
T  6641717 gaaatgacaatattagagatagagt----tggggtatcacctatagtagaaaagatggtagaaactagacttgggttgtttgggcat 6641635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 7080436 - 7080509
Alignment:
Q  162 gatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    |||||||| |||| ||||||||||  |||| |||| |||| ||||| ||||||||||||||||||||| |||||    
T  7080436 gatcagatggagatgagtcaaatctttagaagtagaggaaaacctataaaaactataagagaaactatcaagaa 7080509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 8364668 - 8364725
Alignment:
Q  178 gtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    |||| ||||||||||| ||  ||||||||| |||||||||||||||||||||||||||    
T  8364668 gtcagatcactagaggaagatgaagacctaaaaaaactataagagaaactattaagaa 8364725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 33998352 - 33998288
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagt 65  Q
    ||||||||||||||||||||||||||| |  |  | |||||||||||| ||||||||||||||||    
T  33998352 ttgcgttggatgtgtggtaagactagatgtgataggattagaaatgactacattagagagagagt 33998288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 38883 - 38933
Alignment:
Q  186 actagaggtaggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    ||||||||| |||| | ||||||||||||||||||||||||||||| ||||    
T  38883 actagaggtcggggtatacctagaaaaactataagagaaactattaggaag 38933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 4948475 - 4948417
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||||| |||||||||||| |||||||||| |||||||| |||| |||||||| ||||    
T  4948475 agtcaaaccactagaggtagaggaagacctacaaaaactaaaagaaaaactattgagaa 4948417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 4955446 - 4955388
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||||| |||||||||||| |||||||||| |||||||| |||| |||||||| ||||    
T  4955446 agtcaaaccactagaggtagaggaagacctacaaaaactaaaagaaaaactattgagaa 4955388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 233
Target Start/End: Complemental strand, 21870348 - 21870178
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtg--------atttgggcatgtagtgagaagacctgtggattctgta-----tatagtagat 164  Q
    ||||| |||||||||| |||||||||||| | ||||||||        |||| ||||| ||| |||||||||||| |||| ||||      | |||||||    
T  21870348 cacctgtagtagaaaagatggtagaaactcggcttaggtggtttgggcatttaggcatttagagagaagacctgtagattttgtagtaaggagagtagat 21870249  T
Q  165 cagatagagaggagtcaaatcactagaggtaggggaagacctag--aaaaactataagagaaactattaag 233  Q
     |||| ||||| ||||||||||||| ||| || |||||||||||  |||||||||  ||||||||||||||    
T  21870248 aagatggagagtagtcaaatcactaaaggcagaggaagacctagaaaaaaactatctgagaaactattaag 21870178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 154
Target Start/End: Complemental strand, 6293674 - 6293585
Alignment:
Q  65 tgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta 154  Q
    |||| |||||||  |||||||||| |||| ||||| ||||||||  | ||||| ||||||||||||| ||||| |||||| |||| ||||    
T  6293674 tgaggtggggtggtacctatagtacaaaatatggtggaaactaggttcaggtggtttgggcatgtagagagaacacctgtagattatgta 6293585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 9568594 - 9568651
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagag 58  Q
    ||||||||||||||||||||||||||||   |  |||||| |||||||||||||||||    
T  9568594 ttgcgttggatgtgtggtaagactagacatgatagaattataaatgacaacattagag 9568651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 140
Target Start/End: Original strand, 26291786 - 26291848
Alignment:
Q  76 gacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagac 140  Q
    |||||||||| ||||||| |||||||||| |||||||||||| |||  |||||||| ||||||||    
T  26291786 gacacctataatagaaaatatggtagaaaatagacttaggtggttt--gcatgtagagagaagac 26291848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 141
Target Start/End: Original strand, 32755889 - 32755991
Alignment:
Q  37 attagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgaga 136  Q
    ||||| ||||||| |||||||||||||| | |  |||||  ||||||||||||||||  ||||||||| ||| ||||| || ||||| ||||||| | ||    
T  32755889 attaggaatgacaccattagagagagagagtg--ggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggtcatgtagaggga 32755986  T
Q  137 agacc 141  Q
    |||||    
T  32755987 agacc 32755991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 139
Target Start/End: Complemental strand, 43326 - 43266
Alignment:
Q  79 acctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaaga 139  Q
    ||||||| ||||||||||||| |||||||| |||||||| | ||| ||||||| |||||||    
T  43326 acctataatagaaaaaatggtggaaactaggcttaggtggtctggccatgtagagagaaga 43266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 144
Target Start/End: Original strand, 608096 - 608230
Alignment:
Q  4 cgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaa 103  Q
    ||||||||| ||||||||||||||  | |  | ||||| ||||||| ||||||||||||  ||||    |||  ||||||||||||||||  || |||||    
T  608096 cgttggatgagtggtaagactagataggataggattaggaatgacaccattagagagag--tgag----ggtatcacctatagtagaaaagttgatagaa 608189  T
Q  104 actagacttaggtgatttgggcatgtagtgagaagacctgt 144  Q
    | ||| ||||| || ||||| ||||||| ||||||||||||    
T  608190 aataggcttagatggtttggacatgtagagagaagacctgt 608230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 1747812 - 1747753
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    ||||||||  ||||||| || ||||||||||||||||| ||||||||||||  |||||||    
T  1747812 agtcaaatttctagaggcagaggaagacctagaaaaaccataagagaaactggtaagaag 1747753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 6055963 - 6055888
Alignment:
Q  156 atagtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    |||||||||||||| ||   ||||||||| |  | |||||| |||||||||| ||||||| |||||||||||||||    
T  6055963 atagtagatcagatggaagagagtcaaataaaaaaaggtagaggaagacctataaaaactttaagagaaactatta 6055888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 141
Target Start/End: Original strand, 30679417 - 30679476
Alignment:
Q  82 tatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    ||||||||||||  ||||||||| ||| ||||| |||||||||||||||| ||| |||||    
T  30679417 tatagtagaaaagttggtagaaaataggcttagatgatttgggcatgtagagaggagacc 30679476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 32400113 - 32400160
Alignment:
Q  37 attagaaatgacaacattagagagagagtgagctggggtgacacctat 84  Q
    |||||||||||||||||||||||||||| ||| |||||| || |||||    
T  32400113 attagaaatgacaacattagagagagagagagttggggtaacgcctat 32400160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 32913433 - 32913374
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactat-aagagaaactattaagaa 235  Q
    |||||||||||||||||||| | |||  ||||||||||||| || |||||||||||||||    
T  32913433 agtcaaatcactagaggtagagaaaggtctagaaaaactataaaaagaaactattaagaa 32913374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 227
Target Start/End: Original strand, 5095957 - 5095995
Alignment:
Q  189 agaggtaggggaagacctagaaaaactataagagaaact 227  Q
    |||||||| ||||||||||||||||||| ||||||||||    
T  5095957 agaggtagaggaagacctagaaaaactagaagagaaact 5095995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 231
Target Start/End: Original strand, 7133869 - 7133911
Alignment:
Q  189 agaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    |||||||| |||||||||||||||||||| |||||||| ||||    
T  7133869 agaggtagaggaagacctagaaaaactattagagaaaccatta 7133911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 231
Target Start/End: Original strand, 7136792 - 7136834
Alignment:
Q  189 agaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    |||||||| |||||||||||||||||||| |||||||| ||||    
T  7136792 agaggtagaggaagacctagaaaaactattagagaaaccatta 7136834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 35199812 - 35199739
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    |||||||||||| ||| | ||||| |||||||||| ||| | ||||  |||||||| ||||| |||||||||||    
T  35199812 agtagatcagatggagggtagtcatatcactagagctagagtaagaattagaaaaattataaaagaaactatta 35199739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 579535 - 579587
Alignment:
Q  183 atcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||||||||| || | |||||||  ||||||| |||||||||||||||||||    
T  579535 atcactagaggcagagaaagacctcaaaaaactgtaagagaaactattaagaa 579587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 232
Target Start/End: Original strand, 13674759 - 13674791
Alignment:
Q  200 aagacctagaaaaactataagagaaactattaa 232  Q
    |||||||| ||||||||||||||||||||||||    
T  13674759 aagacctataaaaactataagagaaactattaa 13674791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 20427948 - 20427875
Alignment:
Q  37 attagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttag 114  Q
    ||||| ||||||| ||||||||||||||||    |||||  ||||||||||||||||  ||||||||| ||| |||||    
T  20427948 attaggaatgacaccattagagagagagtg----ggggtagcacctatagtagaaaagttggtagaaaataggcttag 20427875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 2e-39; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 71 - 236
Target Start/End: Complemental strand, 44438003 - 44437833
Alignment:
Q  71 ggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtatatag-----tagatc 165  Q
    ||||| || |||||||||||||| |||||||||||||||| |||||| ||| ||||||||| |||||||| |||||||||||||   ||     |||||     
T  44438003 ggggtaacccctatagtagaaaagatggtagaaactagacataggtggtttcggcatgtagagagaagacttgtggattctgtaataaggagtatagatg 44437904  T
Q  166 agatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    |||| ||| ||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  44437903 agatggaggggagtcagatcactagaggtaggggtagacctagaaaaactatatgagaaactattaagaag 44437833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 40 - 236
Target Start/End: Original strand, 43832068 - 43832268
Alignment:
Q  40 agaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaaga 139  Q
    ||||||||||||||||||||||||| ||| ||||||  ||||||||||| |||| || || |||||||| |||||||||||||||||||||  ||||| |    
T  43832068 agaaatgacaacattagagagagagagagttggggtatcacctatagtaaaaaatat-gtggaaactaggcttaggtgatttgggcatgtacagagaaaa 43832166  T
Q  140 cctgtggattctgta-----tatagtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 234  Q
    | |||||||| ||||      | |||||||||||| ||||| | |||||||| |||| | || |||||||||| | ||||||||||||||||||||||||    
T  43832167 catgtggattatgtagttaggagagtagatcagatggagagtaatcaaatcagtagacgcagaggaagacctaaacaaactataagagaaactattaaga 43832266  T
Q  235 ag 236  Q
    ||    
T  43832267 ag 43832268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 42543263 - 42543405
Alignment:
Q  99 tagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtatatag-----tagatcagatagagaggagtcaaatcactagagg 193  Q
    ||||||||| ||||||||| ||||||||||||  ||||||||||||||||||||||  |||     ||||||| || ||| ||||||| |||||||||||    
T  42543263 tagaaactaaacttaggtggtttgggcatgtacagagaagacctgtggattctgtagttaggagagtagatcaaatggaggggagtcagatcactagagg 42543362  T
Q  194 taggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    |||||| ||||||||||||||||||||||||||||||| ||||    
T  42543363 taggggtagacctagaaaaactataagagaaactattaggaag 42543405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 4598912 - 4598674
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||||||||||||||||||||||||| |  |||||  ||||||| ||||||||||||||  ||| ||||||  |||||||||||| ||| ||||||    
T  4598912 ttgcgttggatgtgtggtaagactagacgggatagaattcaaaatgacgacattagagagaga--gagttggggtagcacctatagtagtaaagatggta 4598815  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta-----tatagtagatcagatagagaggagtcaaatcactagaggta 195  Q
    |||||||||||| |||| ||||| ||| |||  ||||||| |||| ||| ||||     ||||  |||| | || ||| |||||||  ||||||||||||    
T  4598814 gaaactagactttggtggtttggacatatagaaagaagacttgtgaattttgtagtaagtataacagataaaatggaggggagtcaggtcactagaggta 4598715  T
Q  196 ggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    | || | |||||||||||||||| ||||| |||||| ||||    
T  4598714 gtggtaaacctagaaaaactatacgagaagctattaggaag 4598674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 235
Target Start/End: Complemental strand, 9556712 - 9556482
Alignment:
Q  5 gttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaa 104  Q
    |||||||||||||||||| ||||||| |    ||||||||||||||||||||||||| |||    |||||| |||| |||||||| ||||||||| ||||    
T  9556712 gttggatgtgtggtaagattagacgggatatgattagaaatgacaacattagagagaaagt----tggggtaacacttatagtag-aaaaatggtggaaa 9556618  T
Q  105 ctagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta-----tatagtagatcagatagagaggagtcaaatcactagaggtagggg 199  Q
     ||| |||||||| ||| ||||||||| ||||||||  || |||||||||      | |||| ||||||| |||   |||||||  |||||||| |  ||    
T  9556617 ataggcttaggtggtttaggcatgtagagagaagacaagtagattctgtagtaagaaaagtatatcagatggaggatagtcaaactactagaggcaaagg 9556518  T
Q  200 aagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||||| |||||||||||||| |||||||||||||    
T  9556517 aagaccttgaaaaactataagataaactattaagaa 9556482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 235
Target Start/End: Complemental strand, 37481929 - 37481730
Alignment:
Q  37 attagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgaga 136  Q
    |||||||||||||||||||||||||||||    ||||||    ||||||||| |||| ||||| ||| |||| |||||||| |||| |||||||| ||||    
T  37481929 attagaaatgacaacattagagagagagt----tggggtagttcctatagtaaaaaagatggttgaacctaggcttaggtggtttgagcatgtagagaga 37481834  T
Q  137 agacctgtggattctgtatatag-----tagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    |||| |||| ||| ||||  |||     |||||||||| ||| ||||| | |||||| |||||||  ||||||| ||||||||||| |||||||||||||    
T  37481833 agacttgtgaattttgtagttaggagagtagatcagatggaggggagttagatcactggaggtagatgaagaccaagaaaaactattagagaaactatta 37481734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 37 - 235
Target Start/End: Original strand, 38434921 - 38435121
Alignment:
Q  37 attagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagac-ttaggtgatttgggcatgtagtgag 135  Q
    ||||||||||||||||||||||||||| |    ||||||  |||||||||||||||| ||||| |||||||||| || |||| ||||||||||||  |||    
T  38434921 attagaaatgacaacattagagagagaat----tggggtagcacctatagtagaaaagatggtggaaactagactttgggtggtttgggcatgtaaagag 38435016  T
Q  136 aagacctgtggattctgta-----tatagtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatt 230  Q
    ||||| ||| ||| || ||      | ||||||||| || |||   ||||| ||||||||||| || || |||||||||||||||| |||||||||||||    
T  38435017 aagacttgtagatgctttagtaaggagagtagatcatatggaggatagtcagatcactagaggcagaggtagacctagaaaaactacaagagaaactatt 38435116  T
Q  231 aagaa 235  Q
    |||||    
T  38435117 aagaa 38435121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 19235174 - 19235097
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    |||||||||||| ||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||    
T  19235174 agtagatcagatggaggggagtcaaatcactagagatagaggaagacctagaaaaactataagagaaactattgagaa 19235097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 225
Target Start/End: Complemental strand, 23714602 - 23714384
Alignment:
Q  5 gttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaa 104  Q
    ||||||||||||||||||||||||  ||  | |||| ||||||| |||||||| ||||       | ||||  ||| |||||||||||| ||||| ||||    
T  23714602 gttggatgtgtggtaagactagacaaaataggattaaaaatgacgacattagatagag-------ttgggtagcacatatagtagaaaagatggtggaaa 23714510  T
Q  105 ctagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta-----tatagtagatcagatagagaggagtcaaatcactagaggtagggg 199  Q
    ||||||||| ||  ||| ||||||||| |||||||| |||||||| ||||      | ||||||||| || | | ||||||||||||||||| ||||  |    
T  23714509 ctagacttatgtagtttaggcatgtagagagaagacttgtggattatgtagtaaggagagtagatcaaatggtggggagtcaaatcactagacgtagatg 23714410  T
Q  200 aagacctagaaaaactataagagaaa 225  Q
    ||||| ||||||||||||||||||||    
T  23714409 aagacttagaaaaactataagagaaa 23714384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 225
Target Start/End: Complemental strand, 24102274 - 24102056
Alignment:
Q  5 gttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaa 104  Q
    ||||||||||||||||||||||||  ||  | |||| ||||||| |||||||| ||||       | ||||  ||| |||||||||||| ||||| ||||    
T  24102274 gttggatgtgtggtaagactagacaaaataggattaaaaatgacgacattagatagag-------ttgggtagcacatatagtagaaaagatggtggaaa 24102182  T
Q  105 ctagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta-----tatagtagatcagatagagaggagtcaaatcactagaggtagggg 199  Q
    ||||||||| ||  ||| ||||||||| |||||||| |||||||| ||||      | ||||||||| || | | ||||||||||||||||| ||||  |    
T  24102181 ctagacttatgtagtttaggcatgtagagagaagacttgtggattatgtagtaaggagagtagatcaaatggtggggagtcaaatcactagacgtagatg 24102082  T
Q  200 aagacctagaaaaactataagagaaa 225  Q
    ||||| ||||||||||||||||||||    
T  24102081 aagacttagaaaaactataagagaaa 24102056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 231
Target Start/End: Complemental strand, 43752259 - 43752064
Alignment:
Q  37 attagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgaga 136  Q
    ||||||| |||| | ||||||||||||||    ||||||  ||||||||||||||||  ||||||||| ||| |||||||||||||| ||||||| ||||    
T  43752259 attagaactgaccatattagagagagagt----tggggtagcacctatagtagaaaaggtggtagaaaataggcttaggtgatttggacatgtagagaga 43752164  T
Q  137 agacctgtggattctgta-----tatagtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    |||||| | |||| ||||      | |||||||||||| |||   | ||| |||||| |||| |  |||||||||||||||||||| |||||||||||||    
T  43752163 agacctatagattatgtagtagggagagtagatcagatggaggatactcagatcactggaggcataggaagacctagaaaaactatcagagaaactatta 43752064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 41 - 217
Target Start/End: Original strand, 11412695 - 11412871
Alignment:
Q  41 gaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagac 140  Q
    |||||||||||||||||||||||||    ||||||  |||||||||||||||| ||||| |||| ||| |||||||  ||||||||| ||| || ||||     
T  11412695 gaaatgacaacattagagagagagt----tggggtagcacctatagtagaaaatatggtggaaaataggcttaggttgtttgggcatttagagataagaa 11412790  T
Q  141 ctgtggattct---gtatatagtagatcagatagagagg-agtcaaatcactagaggtaggggaagacctagaaaaactat 217  Q
    |||| ||||||   ||| | |||||||||||| ||| || ||||| ||||||||||  || |||| |||||||||||||||    
T  11412791 ctgtagattctgtagtagagagtagatcagatggaggggtagtcagatcactagagccagaggaaaacctagaaaaactat 11412871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 38453037 - 38452897
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||||||| |||||||||||||||   |  | ||||| ||||||| |||||||||||||| |||  |||||  || |||||||||||||  |||||    
T  38453037 ttgcgttggatgagtggtaagactagacatcataggattaggaatgacaccattagagagagagagagtgggggtagcatctatagtagaaaagttggta 38452938  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    |||| ||| ||||| || ||||||||||||| |||||||||    
T  38452937 gaaaataggcttagatggtttgggcatgtagagagaagacc 38452897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 65 - 231
Target Start/End: Original strand, 12141538 - 12141709
Alignment:
Q  65 tgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtat-----atag 159  Q
    |||| ||||||  |||||||||||||||| ||||| ||||  || |||||||| |||||||| ||||  ||||||||||| |||||| ||      | ||    
T  12141538 tgagttggggtagcacctatagtagaaaagatggtggaaaagaggcttaggtggtttgggcacgtagaaagaagacctgtagattctctagtaaggagag 12141637  T
Q  160 tagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    |||||||||| |||   |||||||| || |||||||| ||||||||||||||| ||||| ||||||||||||    
T  12141638 tagatcagattgaggatagtcaaattacaagaggtagaggaagacctagaaaagctataggagaaactatta 12141709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 148
Target Start/End: Original strand, 8180718 - 8180857
Alignment:
Q  5 gttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaa 104  Q
    |||||||| |||||||||||||||   |  | ||||| ||||||| ||||||||||||||||    |||||  ||||||||||||||||  |||||||||    
T  8180718 gttggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtg----ggggtagcacctatagtagaaaagttggtagaaa 8180813  T
Q  105 ctagacttaggtgatttgggcatgtagtgagaagacctgtggat 148  Q
     ||  ||||| || ||||||||||||| ||||||||||||||||    
T  8180814 ataagcttagatggtttgggcatgtagagagaagacctgtggat 8180857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 140
Target Start/End: Original strand, 40759069 - 40759169
Alignment:
Q  37 attagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgaga 136  Q
    ||||||||||||||||||||||||||||   | |||| |  ||| |||||||||||||||||| ||||||||| ||||||| |||| |||||||| ||||    
T  40759069 attagaaatgacaacattagagagagag---gttgggttagcacttatagtagaaaaaatggtggaaactagagttaggtggtttgtgcatgtagagaga 40759165  T
Q  137 agac 140  Q
    ||||    
T  40759166 agac 40759169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 26784529 - 26784453
Alignment:
Q  159 gtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    |||||| |||| ||| | ||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||    
T  26784529 gtagataagatggagggtagtcaaatcactagaggcagagaaagacctagaaaaactataagagaaactattaagaa 26784453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 41763389 - 41763251
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    ||||| |||||| |||||||||||||||   |  | ||||| ||||||| ||||||||||||||||     |||| |||||||||||||||||  |||||    
T  41763389 ttgcgatggatgagtggtaagactagacaagataggattaggaatgacaccattagagagagagtg-----gggtaacacctatagtagaaaagttggta 41763295  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacctgt 144  Q
    |||| ||| |||||||| ||||| |||| || ||||||||||||    
T  41763294 gaaaataggcttaggtggtttggacatgcagagagaagacctgt 41763251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 5759185 - 5759115
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaacta 228  Q
    |||||||||||| ||| ||| |||||||||||||||||||| || ||||||||||||||| ||||||||||    
T  5759185 agtagatcagatggaggggaatcaaatcactagaggtagggaaatacctagaaaaactattagagaaacta 5759115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 33504315 - 33504392
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    |||||||||||| ||| | ||||| ||||||||||| || | || |||||||||||||||||||||||||||||||||    
T  33504315 agtagatcagatggagggtagtcagatcactagaggcagagaaaaacctagaaaaactataagagaaactattaagaa 33504392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 141
Target Start/End: Original strand, 12734641 - 12734769
Alignment:
Q  7 tggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaact 106  Q
    |||||| ||||||||||||||||| |  | ||||||||||||| |||||||||||| |      |||||  ||||||||||||||||| ||||||||| |    
T  12734641 tggatgagtggtaagactagacgggataggattagaaatgacaccattagagagagtg------ggggtagcacctatagtagaaaaattggtagaaaat 12734734  T
Q  107 agacttaggtgatttgggcatgtagtgagaagacc 141  Q
    || ||||| || ||||| ||||||  |||||||||    
T  12734735 aggcttagatggtttggacatgtaaagagaagacc 12734769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 148
Target Start/End: Original strand, 25834650 - 25834758
Alignment:
Q  38 ttagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaa 137  Q
    |||| ||||||| |||||||||||||| | |  |||||  ||||||||||||||||  ||||||||| ||| ||||| || ||||| ||||||| |||||    
T  25834650 ttaggaatgacaccattagagagagagagtg--ggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaa 25834747  T
Q  138 gacctgtggat 148  Q
    |||||||||||    
T  25834748 gacctgtggat 25834758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 144
Target Start/End: Complemental strand, 16097332 - 16097195
Alignment:
Q  7 tggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaact 106  Q
    |||||| |||||||||||||| || |    ||||||||||||| | ||||||||||   |||  |||||  |||||||| |||||||  ||||||||| |    
T  16097332 tggatgagtggtaagactagatgggatatgattagaaatgacaccgttagagagagttagagtgggggtagcacctataatagaaaagttggtagaaaat 16097233  T
Q  107 agacttaggtgatttgggcatgtagtgagaagacctgt 144  Q
    || ||||| |||||||| ||||||| ||||||||||||    
T  16097232 aggcttagatgatttggacatgtagagagaagacctgt 16097195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 42092453 - 42092683
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||| |||||||||| |||||||||||||| |    ||||||||||||||  ||||||||||       ||||||  | |||||| ||||||| ||||||    
T  42092453 ttgcattggatgtgtagtaagactagacgggatatgattagaaatgacaatgttagagagagt------tggggtagcgcctatactagaaaagatggta 42092546  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta-----tatagtagatcagatagagaggagtcaaatcactagaggta 195  Q
    |||||||   ||||||||| ||||||||||| |||||| | ||| |||| ||||      | ||||||| |||| ||| | |||||| |||||| ||  |    
T  42092547 gaaactaagattaggtgatctgggcatgtagagagaaggcttgtagattttgtagtaaggagagtagattagatggagggtagtcaattcactatagaga 42092646  T
Q  196 ggggaagacctagaaaaactataagagaaactattaa 232  Q
      || |||||||||||||||||| |||||||||||||    
T  42092647 caggtagacctagaaaaactataggagaaactattaa 42092683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 3866006 - 3866142
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||||||| |||||||||||||||   |  | ||||| ||||||| |||| |||||||||||    |||||  ||||||||||| ||||  |||||    
T  3866006 ttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccattggagagagagtg----ggggtagcacctatagtaaaaaagttggta 3866101  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    |||| ||| ||||| || |||| |||||||| |||||||||    
T  3866102 gaaaataggcttagatggtttgtgcatgtagagagaagacc 3866142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 236
Target Start/End: Original strand, 786913 - 786991
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    |||| ||||||||||| ||||| |||||| |||| |||||||||||  || |||||| |||||||||||||| ||||||    
T  786913 agtaaatcagatagaggggagttaaatcaatagatgtaggggaagatataaaaaaaccataagagaaactatcaagaag 786991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 12489967 - 12489914
Alignment:
Q  183 atcactagaggtaggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    ||||||||| ||||||| |||||||||||||||||| |||||||||||| ||||    
T  12489967 atcactagaagtaggggtagacctagaaaaactatatgagaaactattaggaag 12489914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 151
Target Start/End: Complemental strand, 13241057 - 13240947
Alignment:
Q  37 attagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgaga 136  Q
    ||||||||||||||||||||||||||| |    ||| ||  ||  |||  ||||||| ||||| |||||||| |||||||| ||||||||||||| ||||    
T  13241057 attagaaatgacaacattagagagagaat----tggagtagcaagtatgttagaaaagatggtggaaactaggcttaggtggtttgggcatgtagagaga 13240962  T
Q  137 agacctgtggattct 151  Q
    |||| ||| ||||||    
T  13240961 agacatgtagattct 13240947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 26670888 - 26670937
Alignment:
Q  186 actagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||||||||| |||||||||| ||||||||||| |||||||||||||||    
T  26670888 actagaggtagaggaagacctacaaaaactataaaagaaactattaagaa 26670937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 198 - 235
Target Start/End: Original strand, 33287553 - 33287590
Alignment:
Q  198 ggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||||||||||||||||||||||||||||||||||||    
T  33287553 ggaagacctagaaaaactataagagaaactattaagaa 33287590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 9579049 - 9578912
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||||||||||||||||| ||||    |  |||||| |||||||||  ||||||||||       ||||||||||| |||||||| ||| ||| |     
T  9579049 ttgcgttggatgtgtggtaagaatagatatgatagaattaaaaatgacaatgttagagagagt------tggggtgacacatatagtagtaaagatgatg 9578956  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacctgt 144  Q
     ||| |||||||||||| ||||| ||||||| ||||||||||||    
T  9578955 taaaatagacttaggtggtttggacatgtagagagaagacctgt 9578912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 29548829 - 29548750
Alignment:
Q  156 atagtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||||||||| || ||| | ||||||||||| ||| | || |||||||||  ||||||||||||||||| |||||||||    
T  29548829 atagtagatcaaatggagggtagtcaaatcacgagaagcagaggaagacctgaaaaaactataagagaaattattaagaa 29548750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 2610463 - 2610525
Alignment:
Q  2 tgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagag 64  Q
    ||||||||||| ||||||||||||||| | || | ||||| ||||||| ||||||||||||||    
T  2610463 tgcgttggatgagtggtaagactagacaggacaggattaggaatgacaccattagagagagag 2610525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 4481581 - 4481651
Alignment:
Q  159 gtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactat 229  Q
    |||||||| || ||| | ||||||| | |||||||| | |||||||||||||||| |||||||||||||||    
T  4481581 gtagatcaaatggagggtagtcaaaccgctagaggtggaggaagacctagaaaaattataagagaaactat 4481651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 75 - 141
Target Start/End: Complemental strand, 24583910 - 24583844
Alignment:
Q  75 tgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    ||||||||||| |||||||  ||||||||| ||| ||||| || ||||||||||||| |||||||||    
T  24583910 tgacacctataatagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacc 24583844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 37470304 - 37470250
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    ||||| |||||||| ||||| |||||||||  |||||||||||||||||||||||    
T  37470304 agtcagatcactagtggtagaggaagacctgaaaaaactataagagaaactatta 37470250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 45077682 - 45077838
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    ||||||||||||||||||||||||||||   |  ||||||||||||  ||| |||||| ||||| ||| | | ||  || ||||||||||||| |||||     
T  45077682 ttgcgttggatgtgtggtaagactagactagatagaattagaaatgtgaactttagagggagagagagtttgagtagcatctatagtagaaaagatggtg 45077781  T
Q  101 gaaactagactt---aggtgatttgggcatgtagtgagaagacctgtggattctgta 154  Q
    || | |||||||   ||||| ||| ||||||||| ||||| || ||| |||| ||||    
T  45077782 gagagtagacttgggaggtggttttggcatgtagagagaaaacttgtagattttgta 45077838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 231
Target Start/End: Complemental strand, 45543231 - 45543189
Alignment:
Q  189 agaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    |||||||| ||||||||| ||||||||||||||||||||||||    
T  45543231 agaggtagaggaagacctggaaaaactataagagaaactatta 45543189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 140
Target Start/End: Original strand, 2610572 - 2610657
Alignment:
Q  55 agagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagac 140  Q
    |||||||||| |||  |||||  |||||||||| |||||  ||||||||| ||| ||||| || ||||||||||||| ||||||||    
T  2610572 agagagagagagagtgggggtagcacctatagtggaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 2610657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 151
Target Start/End: Complemental strand, 14197437 - 14197364
Alignment:
Q  79 acctatagtagaaaaaatggtagaaactagac-ttaggtgatttgggcatgtagtgagaagacctgtggattct 151  Q
    ||||||||||||||| ||||| |||||||| | ||||||| ||||||||||||| | |||||| ||| ||||||    
T  14197437 acctatagtagaaaagatggtggaaactaggctttaggtggtttgggcatgtagagtgaagacttgtagattct 14197364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 7293694 - 7293762
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaac 226  Q
    |||||||||||| ||||| ||||  ||||||||||||||||| | ||||||||||| || || ||||||    
T  7293694 agtagatcagatggagagaagtcggatcactagaggtaggggtaaacctagaaaaagtagaaaagaaac 7293762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 19855559 - 19855631
Alignment:
Q  163 atcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    |||||||  |||| ||||||| ||  ||||| || |||||||||||| ||||||||| |||||||||||||||    
T  19855559 atcagatcaagagtagtcaaaccagcagaggcagaggaagacctagataaactataaaagaaactattaagaa 19855631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 36869976 - 36870028
Alignment:
Q  184 tcactagaggtaggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    |||||||||| |  |||||| |||||||||||||||||||||||| |||||||    
T  36869976 tcactagaggcataggaagagctagaaaaactataagagaaactaataagaag 36870028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 142
Target Start/End: Complemental strand, 41779575 - 41779519
Alignment:
Q  86 gtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacct 142  Q
    |||||||||||||| |||||| |||||||||| ||||  ||||||| ||||||||||    
T  41779575 gtagaaaaaatggtggaaactcgacttaggtggtttgatcatgtagagagaagacct 41779519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 18959003 - 18959074
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactat 229  Q
    |||||||||||| |||   ||||| ||||  ||||| || ||||||||||||||||||| ||||||||||||    
T  18959003 agtagatcagatggaggatagtcagatcatcagaggcagaggaagacctagaaaaactacaagagaaactat 18959074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 19024288 - 19024347
Alignment:
Q  176 gagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||||||||| ||||||||  ||||| | ||||| ||| ||||||||||||||||||||    
T  19024288 gagtcaaatcattagaggtataggaaggcgtagaagaaccataagagaaactattaagaa 19024347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 141
Target Start/End: Complemental strand, 43238368 - 43238305
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    ||||||||||||||||  ||||||||| ||| ||||| || ||||||||||||  |||||||||    
T  43238368 cacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtaaagagaagacc 43238305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 13444100 - 13444026
Alignment:
Q  156 atagtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatt 230  Q
    |||||||||||||| |||  |||||||||||  |||||||| |||| || ||||||| |||| ||||||| ||||    
T  13444100 atagtagatcagatggaggagagtcaaatcaaaagaggtagaggaaaacttagaaaatctatgagagaaattatt 13444026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 235
Target Start/End: Original strand, 18188863 - 18188921
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||||||||||||||| |  || |||| |||||||| |||||||||||||||| ||||    
T  18188863 agtcaaatcactagaggcaaagggagacttagaaaaattataagagaaactattcagaa 18188921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 232
Target Start/End: Original strand, 32754798 - 32754852
Alignment:
Q  178 gtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaa 232  Q
    |||||||||||||||| || ||||||||||||  | |||||||||||| ||||||    
T  32754798 gtcaaatcactagagggagaggaagacctagagtagctataagagaaagtattaa 32754852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 236
Target Start/End: Original strand, 36819268 - 36819346
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    ||||||||| ||  |||| |||||| |||||||||  || |||||||||||  ||||| || |||||||||||||||||    
T  36819268 agtagatcaaattcagagtagtcaactcactagagacagaggaagacctaggcaaactttacgagaaactattaagaag 36819346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 37452397 - 37452339
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||| ||||| ||||| || |||||||||||||||| |||||||| | ||||||||||    
T  37452397 agtcagatcacaagaggaagaggaagacctagaaaaattataagaggagctattaagaa 37452339  T

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Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 104
Target Start/End: Original strand, 4807568 - 4807629
Alignment:
Q  43 aatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaa 104  Q
    ||||||| |||||||||||||| |||  |||||  ||||||||||||||||  |||||||||    
T  4807568 aatgacatcattagagagagagagagtgggggtagcacctatagtagaaaagttggtagaaa 4807629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 140
Target Start/End: Original strand, 13149315 - 13149400
Alignment:
Q  55 agagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagac 140  Q
    |||||||||||||| ||||||  ||||||||   ||||| ||| |||||| ||||||| |||| | ||| ||||||| ||||||||    
T  13149315 agagagagagtgagttggggtagcacctataaacgaaaagatgatagaaaatagacttcggtggtctggccatgtagagagaagac 13149400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 38860270 - 38860347
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||||| |||| ||| | |||||||| |||||||| ||  |||||| | ||||||  ||||||||||||||||||||    
T  38860270 agtagatgagatggagggtagtcaaattactagaggcagacgaagacttggaaaaatgataagagaaactattaagaa 38860347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 114
Target Start/End: Original strand, 786837 - 786873
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttag 114  Q
    |||||||||||||||| |||| |||||||||||||||    
T  786837 cacctatagtagaaaagatggcagaaactagacttag 786873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 151
Target Start/End: Complemental strand, 9647883 - 9647811
Alignment:
Q  79 acctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattct 151  Q
    ||||||||||||||  ||||| ||||||||  ||||||| ||||| ||||||   ||||||||||| ||||||    
T  9647883 acctatagtagaaatgatggtggaaactagctttaggtggtttggacatgtaaaaagaagacctgtagattct 9647811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 229
Target Start/End: Complemental strand, 13592457 - 13592417
Alignment:
Q  189 agaggtaggggaagacctagaaaaactataagagaaactat 229  Q
    |||||||  ||||||||||||| ||||||||||||||||||    
T  13592457 agaggtataggaagacctagaagaactataagagaaactat 13592417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 43260496 - 43260567
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaa 232  Q
    |||||||||||| ||| | |||||||||||||||   || |||| | |||||||||| |||||||||| ||||||    
T  43260496 agtagatcagatggagggtagtcaaatcactaga---agaggaaaatctagaaaaaccataagagaaagtattaa 43260567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 226
Target Start/End: Complemental strand, 43573287 - 43573251
Alignment:
Q  190 gaggtaggggaagacctagaaaaactataagagaaac 226  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  43573287 gaggtagaggaagacctagaaaaactataagaaaaac 43573251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 8e-39; HSPs: 95)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 43423651 - 43423888
Alignment:
Q  1 ttgcgttggatgtgtggt--aagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatgg 98  Q
    |||||||||||||||||   |||||||||| | |  | |||||||||||| ||||||||||||||||    |||||| ||||||||||||||||| ||||    
T  43423651 ttgcgttggatgtgtgggggaagactagacaggataggattagaaatgaccacattagagagagagt----tggggtaacacctatagtagaaaagatgg 43423746  T
Q  99 tagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta-----tatagtagatcagatagagaggagtcaaatcactagagg 193  Q
    | |||||||| |||||||| ||||| ||||||| |||||||| ||| |||| ||||     || ||||||  |||| || || |||||||||||||||||    
T  43423747 tggaaactaggcttaggtggtttggccatgtagagagaagacttgtagattatgtagtaagtagagtagactagatggatagtagtcaaatcactagagg 43423846  T
Q  194 taggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||| |||||||||||||||| || |||||| || ||||||||    
T  43423847 tagaggaagacctagaaaaattacaagagagaccattaagaa 43423888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 78 - 236
Target Start/End: Original strand, 10272266 - 10272428
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtat-----atagtagatcagataga 172  Q
    ||||| |||||||||| ||||||||||||||||| | ||| ||| ||||||||| |||||||||||||||||| |||      | || ||||||||| ||    
T  10272266 cacctgtagtagaaaagatggtagaaactagactaaagtggttttggcatgtagagagaagacctgtggattc-gtaggaaggagaggagatcagatgga 10272364  T
Q  173 gaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaag 236  Q
      ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  10272365 tgggagtcaaatcactagaggtaggggaagacctagaaaacttataagagaaactattaagaag 10272428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 26016371 - 26016602
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||||||||||||||||||||||| | |   ||||| |||| |   |||||||||||||||    |||||| |||||||||  |||||| ||||||    
T  26016371 ttgcgttggatgtgtggtaagactagacaggatataattataaataatggcattagagagagagt----tggggtaacacctatatgagaaaagatggta 26016466  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta-----tatagtagatcagatagagaggagtcaaatcactagaggta 195  Q
    ||||||||| ||||||| |||||| ||||||  ||||||||| || ||||||||      | | ||||||||||  || ||||||| |||||||||||||    
T  26016467 gaaactagatttaggtggtttgggtatgtagaaagaagacctatgcattctgtagcaaggagattagatcagatgaaggggagtcagatcactagaggta 26016566  T
Q  196 ggggaagacctagaaaaactataagagaaactatta 231  Q
     | | |||||||||||||||||||||||||||||||    
T  26016567 agagtagacctagaaaaactataagagaaactatta 26016602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 2 - 236
Target Start/End: Original strand, 40419574 - 40419809
Alignment:
Q  2 tgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtag 101  Q
    ||||||| |||| |||||| |||||| |  |  |||||||||||||||||||||||||||||||    ||||||   || |||||||||| | |||||||    
T  40419574 tgcgttgaatgtatggtaaaactagatgagatagaattagaaatgacaacattagagagagagt----tggggtagaacttatagtagaatagatggtag 40419669  T
Q  102 aaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta-----tatagtagatcagatagagaggagtcaaatcactagaggtag 196  Q
     ||||||||||| ||| ||||||||||||| |||||||| |||||||| ||||      | ||||| |||||| ||| ||||| | || |||||||||||    
T  40419670 taactagacttaagtggtttgggcatgtagagagaagacatgtggattatgtagcaaggagagtagttcagatggaggggagttagataactagaggtag 40419769  T
Q  197 gggaagacctagaaaaactataagagaaactattaagaag 236  Q
    ||| |||| ||||||| |||||  ||||||||||| ||||    
T  40419770 gggtagacatagaaaatctatacaagaaactattatgaag 40419809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 101 - 236
Target Start/End: Original strand, 28528385 - 28528525
Alignment:
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtat-----atagtagatcagatagagaggagtcaaatcactagaggta 195  Q
    ||||||||||||||||| ||| ||||||| | |||||||| |||||||||||||      | ||||||||| || ||| ||||||||||| ||||| |||    
T  28528385 gaaactagacttaggtggtttcggcatgtcgggagaagacttgtggattctgtagtaaggacagtagatcaaatggaggggagtcaaatccctagaagta 28528484  T
Q  196 ggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    |||||||||||| ||||||||||| ||||||||||||||||    
T  28528485 ggggaagacctaaaaaaactataacagaaactattaagaag 28528525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 55 - 229
Target Start/End: Original strand, 2544583 - 2544761
Alignment:
Q  55 agagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta 154  Q
    |||||||||| ||| ||||||  |||||||||||||||| ||||| ||||  ||||||||||| ||||| ||||||| |||||||||| | |||||| ||    
T  2544583 agagagagagagagttggggtagcacctatagtagaaaagatggtggaaaacagacttaggtggtttggacatgtagagagaagacctatagattctata 2544682  T
Q  155 -----tatagtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactat 229  Q
          | |||||||||||| |||   ||||||| |||||||||||| |||||||||||||||||||| |||||||||||    
T  2544683 gtaaggagagtagatcagatggaggatagtcaaa-cactagaggtagaggaagacctagaaaaactatcagagaaactat 2544761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 231
Target Start/End: Original strand, 9509288 - 9509483
Alignment:
Q  37 attagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgaga 136  Q
    ||||||||||||| |||||||||||||||    ||||||  |||||||||||||||| |||||| ||| ||| |||||||  ||||||||||||| ||||    
T  9509288 attagaaatgacaccattagagagagagt----tggggtagcacctatagtagaaaagatggtaaaaaataggcttaggtagtttgggcatgtagagaga 9509383  T
Q  137 agacctgtggattctgta-----tatagtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    ||||| ||  || || ||     || |||||||||||| |||  |||||| || |  |||||||| |||||||||||||||||||||||| |||||||||    
T  9509384 agaccggtatatgctttagtacttagagtagatcagatggaggagagtcatattagaagaggtagaggaagacctagaaaaactataagataaactatta 9509483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 78 - 236
Target Start/End: Complemental strand, 27637908 - 27637743
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta-----tatagtagatcagata-- 170  Q
    ||||||||| |||||| ||| ||||||||||||||||||| ||||||||||||| || ||||| |||||||  ||||      | ||||||||| |||      
T  27637908 cacctatagcagaaaagatgatagaaactagacttaggtgttttgggcatgtagagaaaagacatgtggatgttgtagtaaggagagtagatcatatatg 27637809  T
Q  171 gagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    ||| |||| |||||||||||||||||||||||||||| ||||||| | ||||||||||| ||||||    
T  27637808 gagtggaggcaaatcactagaggtaggggaagacctaaaaaaacttttagagaaactatcaagaag 27637743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 158 - 236
Target Start/End: Complemental strand, 50771746 - 50771668
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    |||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  50771746 agtagatcagatggaggggagtcaaatgactagaggtaggggaagacctagaaaaactataagcgaaactattaagaag 50771668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 78 - 235
Target Start/End: Complemental strand, 3819131 - 3818969
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtat-----atagtagatcagataga 172  Q
    ||||||| |||||||| ||||| | ||||||||||| ||| |||||||||||||  ||||||| |||||||||| ||      | |||||||||||| ||    
T  3819131 cacctatggtagaaaagatggtggtaactagacttaagtggtttgggcatgtagaaagaagacttgtggattctctagtaaagagagtagatcagatgga 3819032  T
Q  173 gaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    | | | ||||| ||||||||  || ||||||||| ||||||||||||||||||||||||||||    
T  3819031 gggtaatcaaaccactagagaaagaggaagaccttgaaaaactataagagaaactattaagaa 3818969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 78 - 236
Target Start/End: Original strand, 37263338 - 37263501
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctg---tat--atagtagatcagataga 172  Q
    |||||||||||||||| || |||||||||||||||  ||| ||||||||||||| ||||| || |||||||  ||   ||   | |||| ||||||| ||    
T  37263338 cacctatagtagaaaagatagtagaaactagacttcagtggtttgggcatgtagagagaaaacttgtggatgttgcggtaaggagagtaaatcagatgga 37263437  T
Q  173 gaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    | || |||||||||||||||||||||||||||||||||| ||||| || |||||||| ||||||    
T  37263438 ggggtgtcaaatcactagaggtaggggaagacctagaaatactattagtgaaactatcaagaag 37263501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 51584855 - 51584912
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 234  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51584855 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 51584912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 97 - 236
Target Start/End: Complemental strand, 52442784 - 52442640
Alignment:
Q  97 ggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtat-----atagtagatcagatagagaggagtcaaatcactaga 191  Q
    |||||||||||||||||||||| ||||||||||   ||||| || ||||| |||||||      | |||||||||||| ||  ||||||||||| |||||    
T  52442784 ggtagaaactagacttaggtgagttgggcatgtgaagagaaaacatgtgggttctgtagtgcagagagtagatcagatggaagggagtcaaatctctaga 52442685  T
Q  192 ggtaggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    ||||| ||||||||||||| || ||||||||||||||| ||||||    
T  52442684 ggtagaggaagacctagaacaaatataagagaaactatcaagaag 52442640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 1210679 - 1210815
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||||||| ||||||||||||||| | |  | ||||| ||||||| ||||||||||||||||    |||||  ||||||||||||||||  |||||    
T  1210679 ttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccattagagagagagtg----ggggtagcacctatagtagaaaagttggta 1210774  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    |||| ||| ||||| || ||||||||||||| |||||||||    
T  1210775 gaaaataggcttagatggtttgggcatgtagagagaagacc 1210815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 231
Target Start/End: Complemental strand, 9599738 - 9599511
Alignment:
Q  5 gttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaa 104  Q
    |||||||| ||||||||||||||||| |    ||||| ||||||| |||||||||||||||    ||| || ||||||||||||||||| ||||||||||    
T  9599738 gttggatgagtggtaagactagacgggatatgattaggaatgacatcattagagagagagt----tggagtaacacctatagtagaaaagatggtagaaa 9599643  T
Q  105 ctagacttaggtgatttgggcatgtagtgagaagacctgtggattctgt-----atatagtagatcagatagagaggagtcaaatcactagaggtagggg 199  Q
     ||| |||||||| || |||||| ||   ||| ||||||  |||  | |     | | |||||||||||| |||  |||||| ||||  |||||||| ||    
T  9599642 ataggcttaggtggttcgggcatataaatagatgacctgcagatgttatagtacaaagagtagatcagatggaggagagtcagatcataagaggtagagg 9599543  T
Q  200 aagacctagaaaaactataagagaaactatta 231  Q
    ||||||||||||||||| ||||||||||||||    
T  9599542 aagacctagaaaaactacaagagaaactatta 9599511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 95 - 236
Target Start/End: Complemental strand, 12261971 - 12261825
Alignment:
Q  95 atggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtatata-----gtagatcagatagagaggagtcaaatcacta 189  Q
    |||||| |||||||||||||||| ||||||||||| | | |||||| | |||||| ||||   |     ||||||| ||| |||  ||||||||||||||    
T  12261971 atggtataaactagacttaggtggtttgggcatgtggagggaagacttttggattttgtagtaatgagggtagatctgatggaggagagtcaaatcacta 12261872  T
Q  190 gaggtaggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    ||||| ||| ||||||||||||||||||||||||||||| |||||||    
T  12261871 gaggtggggtaagacctagaaaaactataagagaaactagtaagaag 12261825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 45 - 235
Target Start/End: Complemental strand, 48431712 - 48431519
Alignment:
Q  45 tgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgt 144  Q
    |||||||||||||||||||   | |||||||  | |||||||||||||| ||||| |||| ||| |||||||| ||||||||||||| |||||||| |||    
T  48431712 tgacaacattagagagagaa--aactggggtagcccctatagtagaaaagatggtggaaaataggcttaggtggtttgggcatgtagagagaagacttgt 48431615  T
Q  145 ggattctgt-----atatagtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
     |||| |||     | | ||| |||||||| |||   ||||  || || |||||||| |||||||| | |||||||||||||||||||||||||||    
T  48431614 agattttgtagtaaagagagttgatcagatggaggatagtcggattacaagaggtagaggaagacccaaaaaaactataagagaaactattaagaa 48431519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 14 - 141
Target Start/End: Complemental strand, 38808010 - 38807883
Alignment:
Q  14 gtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagactta 113  Q
    |||||||||| |||||| |  ||||||||||||||| |||||||||||||| ||   |||||  ||||||||||||||||  ||||||||| ||||||||    
T  38808010 gtggtaagaccagacgggatagaattagaaatgacaccattagagagagagagaatgggggtagcacctatagtagaaaagttggtagaaaatagactta 38807911  T
Q  114 ggtgatttgggcatgtagtgagaagacc 141  Q
    | || ||| ||||||||  |||||||||    
T  38807910 gatggtttaggcatgtaaagagaagacc 38807883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 158 - 236
Target Start/End: Original strand, 43898321 - 43898399
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    |||||||||||| ||| ||||||||||||| | |||||||| ||||||| ||||||||||||||||||||||| |||||    
T  43898321 agtagatcagatggaggggagtcaaatcaccaaaggtagggaaagacctggaaaaactataagagaaactatttagaag 43898399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 231
Target Start/End: Complemental strand, 32231266 - 32231071
Alignment:
Q  37 attagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgaga 136  Q
    ||||| ||||||| ||||||||||||||||    |||||  ||||||||||||||||| ||||||||| ||| ||||| || ||||||||||||| ||||    
T  32231266 attaggaatgacaccattagagagagagtg----ggggtagcacctatagtagaaaaattggtagaaaataggcttagatggtttgggcatgtagagaga 32231171  T
Q  137 agacctgtggattctgt-at----atagtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    |||| ||| ||| | || ||    | ||||||||| || |||  ||||||| | |  |||||||| ||||||||||| |||||||| |||||||| ||||    
T  32231170 agacttgtagatgccgtcataagaagagtagatcaaatggaggagagtcaagttaaaagaggtagaggaagacctaggaaaactattagagaaaccatta 32231071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 72 - 231
Target Start/End: Complemental strand, 32404807 - 32404643
Alignment:
Q  72 gggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtat-----atagtagatca 166  Q
    |||| |||||||||||| |||| ||||| |||| ||| |||||||| |||||  |||||| |||||||||||| |||||| ||      | ||||||  |    
T  32404807 gggtaacacctatagtaaaaaagatggtggaaaataggcttaggtggtttggatatgtagagagaagacctgtagattctatagtaaggagagtagagaa 32404708  T
Q  167 gatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    ||| |||   ||||| ||||| |||||||| |||||||||| |||||||||||||||||||||||    
T  32404707 gatggaggatagtcatatcacaagaggtagaggaagacctacaaaaactataagagaaactatta 32404643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 141
Target Start/End: Complemental strand, 51441077 - 51440977
Alignment:
Q  37 attagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgaga 136  Q
    ||||| ||||||| ||||||||||||||||    ||||| |||||||||||||||||  ||||||||| ||| ||||| || ||||||||||||| ||||    
T  51441077 attaggaatgacaccattagagagagagtg----ggggtaacacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagaga 51440982  T
Q  137 agacc 141  Q
    |||||    
T  51440981 agacc 51440977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 137
Target Start/End: Original strand, 51812495 - 51812591
Alignment:
Q  37 attagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgaga 136  Q
    |||||||||||| || |||||||||||||    |||||| ||| ||||||||||||| ||||| |||||||| |||| ||||||||||||||||| ||||    
T  51812495 attagaaatgactactttagagagagagt----tggggtaacaactatagtagaaaagatggtggaaactaggcttatgtgatttgggcatgtagagaga 51812590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 78 - 235
Target Start/End: Original strand, 38868889 - 38869051
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtat-----atagtagatcagataga 172  Q
    |||||||  ||||||| ||||| |||||| | |||||||| ||||||||||||| ||||| ||  || |||||| ||      | ||||||| |||| ||    
T  38868889 cacctatcatagaaaagatggtggaaactcggcttaggtggtttgggcatgtagagagaacactagtagattctctagcgaggagagtagattagatgga 38868988  T
Q  173 gaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    | | |||||||||| |||||| ||  ||||||||||||||||||||||||||| |||||||||    
T  38868989 gggtagtcaaatcattagaggcagaagaagacctagaaaaactataagagaaattattaagaa 38869051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 22090032 - 22090166
Alignment:
Q  5 gttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaa 104  Q
    |||||||| ||||||||||||||| | |  | ||||  ||||||| |||||||||||||| | |  |||||  ||||||||||||||||  |||||||||    
T  22090032 gttggatgagtggtaagactagacaggataggattatgaatgacaccattagagagagagagtg--ggggtagcacctatagtagaaaagttggtagaaa 22090129  T
Q  105 ctagacttaggtgatttgggcatgtagtgagaagacc 141  Q
     ||| ||||| || ||||||||||||| |||||||||    
T  22090130 ataggcttagatggtttgggcatgtagggagaagacc 22090166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 212
Target Start/End: Complemental strand, 39422355 - 39422179
Alignment:
Q  35 gaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtga 134  Q
    |||||||||||||||| |||||| |||||||    ||| || |||| |||||||||||| || ||||||||||||||||||||  |||| ||||||| ||    
T  39422355 gaattagaaatgacaatattaga-agagagt----tggagtaacacatatagtagaaaagatagtagaaactagacttaggtg-cttggacatgtagaga 39422262  T
Q  135 gaagacctgtggattctgtatatag-----tagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaa 212  Q
    |||||| ||| |||| ||||  |||     ||||||| || ||| ||||||||||||| ||||||||||  ||| ||||||||    
T  39422261 gaagacatgtagattatgtagttaggagaatagatcatatggaggggagtcaaatcaccagaggtagggctagatctagaaaa 39422179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 55 - 235
Target Start/End: Original strand, 40416355 - 40416540
Alignment:
Q  55 agagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta 154  Q
    |||||||||| ||| ||| ||  |||||||||||||||| ||||| ||||| || |||||||| ||| ||||||||| ||||||| |||| |||| ||||    
T  40416355 agagagagagagagttggagtagcacctatagtagaaaagatggtggaaacgaggcttaggtggtttaggcatgtagagagaagaactgtagattttgta 40416454  T
Q  155 -----tatagtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
          | ||||||||||||  ||   ||||| ||||| | ||  ||  ||||||||||||||||||||||| |||||||||||||    
T  40416455 gtaaggagagtagatcagatgcaggatagtcagatcaccaaagacagaagaagacctagaaaaactataagacaaactattaagaa 40416540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 42501200 - 42501277
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||| |||||| ||| | |||||||||| ||||||||| |||| ||||||||||||||||||||||| |||||||||    
T  42501200 agtagttcagatggagggtagtcaaatcattagaggtagaggaaaacctagaaaaactataagagaaattattaagaa 42501277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 159 - 236
Target Start/End: Original strand, 50806762 - 50806839
Alignment:
Q  159 gtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    |||||||| || ||| ||||||||||||||||| ||||  |||||||||||||||| |||||||||||||| ||||||    
T  50806762 gtagatcaaatggaggggagtcaaatcactagaagtagatgaagacctagaaaaacaataagagaaactatcaagaag 50806839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 696203 - 696339
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    ||||| |||||| ||||||||||||||| | |  | ||||| ||||||| ||||||||||||||||    |||||  ||||||||||||||||  |||||    
T  696203 ttgcgctggatgagtggtaagactagacaggataggattaggaatgacaccattagagagagagtg----ggggtagcacctatagtagaaaagttggta 696298  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    |||| ||| ||||| ||  |||| ||||||| |||||||||    
T  696299 gaaaataggcttagatggcttggacatgtagagagaagacc 696339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 228
Target Start/End: Original strand, 6025612 - 6025767
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtat-----atagtagatcagataga 172  Q
    ||||||||||| |||  ||||| |||||||| ||||| ||| |||||||||||  ||||| |||| ||||| ||  |      | ||||||||||||  |    
T  6025612 cacctatagtaaaaacgatggttgaaactaggcttagatgacttgggcatgtacagagaacacctatggatactccaataaggagagtagatcagatgta 6025711  T
Q  173 gaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaacta 228  Q
    | | ||||||||||||||||| || |||||||||||||||||||||||||| ||||    
T  6025712 gggtagtcaaatcactagaggcagaggaagacctagaaaaactataagagatacta 6025767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 187 - 234
Target Start/End: Original strand, 7083011 - 7083058
Alignment:
Q  187 ctagaggtaggggaagacctagaaaaactataagagaaactattaaga 234  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  7083011 ctagaggtaggggaagacctagaaaagctataagagaaactattaaga 7083058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 70 - 149
Target Start/End: Complemental strand, 8343141 - 8343062
Alignment:
Q  70 tggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggatt 149  Q
    |||||| |||||| |||||||||| ||||| |||||||| ||||||||   ||||||||||| |||||||||||||||||    
T  8343141 tggggtaacacctttagtagaaaagatggtggaaactaggcttaggtggactgggcatgtagagagaagacctgtggatt 8343062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 9592668 - 9592804
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||||||| |||||||||||||||   |  | ||||| ||||||| ||||||||||||||||    |||||  ||||||||||||||||  | |||    
T  9592668 ttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtg----ggggtagcacctatagtagaaaagtttgta 9592763  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    |||| ||| ||||| ||  |||||||||||| |||||||||    
T  9592764 gaaaataggcttagatgggttgggcatgtagagagaagacc 9592804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 30202478 - 30202342
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||||||| |||||||||||||||   |  | ||||| ||||||| ||||||||||||||||    |||||  |||||||||||||||   |||||    
T  30202478 ttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtg----ggggtagcacctatagtagaaaggttggta 30202383  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    |||| ||| ||||| || ||||| ||||||| |||||||||    
T  30202382 gaaaataggcttagatggtttggtcatgtagagagaagacc 30202342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 34792697 - 34792561
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    ||||| |||||| |||||||||||||||   |  | ||||| ||||| | ||||||||||||||||    |||||  ||||||||||||||||  |||||    
T  34792697 ttgcgctggatgagtggtaagactagacatgataggattaggaatgaaaccattagagagagagtg----ggggtagcacctatagtagaaaagttggta 34792602  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    |||| ||| ||||| || ||||||||||||| |||||||||    
T  34792601 gaaagtaggcttagatggtttgggcatgtagagagaagacc 34792561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 222
Target Start/End: Original strand, 49377417 - 49377480
Alignment:
Q  159 gtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagag 222  Q
    ||||||||||| ||||| ||||||||||||||||| || |||||||||||||||||||| ||||    
T  49377417 gtagatcagatggagagtagtcaaatcactagaggcagaggaagacctagaaaaactattagag 49377480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 18793336 - 18793201
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    ||||||||||||||||| |||||||||| | |  ||| || ||||||| |||||| |||||| ||    ||||||   || ||| |||||||| ||||||    
T  18793336 ttgcgttggatgtgtggaaagactagacaggatagaactaaaaatgacgacattaaagagagggt----tggggtaggacttattgtagaaaagatggta 18793241  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagac 140  Q
    |||||||||||||| |||||| |||||| || ||||||||    
T  18793240 gaaactagacttagttgattttggcatgcagagagaagac 18793201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 154
Target Start/End: Original strand, 29807891 - 29807949
Alignment:
Q  96 tggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta 154  Q
    |||||||||||||||||| ||||||||||||||||| |||||||| |||||||| ||||    
T  29807891 tggtagaaactagacttacgtgatttgggcatgtagagagaagacatgtggattatgta 29807949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 235
Target Start/End: Original strand, 16943113 - 16943343
Alignment:
Q  5 gttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaa 104  Q
    |||||||| ||| ||||||||||||  |   ||||||| || |||| ||||| ||||||||    ||||||   ||||||||||||||| ||||| ||||    
T  16943113 gttggatgcgtgataagactagacgagataaaattagacattacaatattagggagagagt----tggggtagtacctatagtagaaaagatggtggaaa 16943208  T
Q  105 ctagacttaggtgatttgggcatgtagtgagaagacctgtggattct---gtat--atagtagatcagatagagaggagtcaaatcactagaggtagggg 199  Q
    ||||| ||| ||| ||||||| ||||| |||||||| | | ||||||   ||||  | ||||||||||||  ||||  ||||||| |||||||| |   |    
T  16943209 ctagattta-gtggtttgggcgtgtagggagaagacatttagattctgcagtatggagagtagatcagatgaagagtggtcaaataactagaggcaaaag 16943307  T
Q  200 aagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||||||| ||| | ||||||||||||||||||||    
T  16943308 aagacctaggaaagcgataagagaaactattaagaa 16943343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 17815571 - 17815648
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    |||| ||||||| ||||| |||||||||| | |||| | ||||||||||||||||| |||||||||||||||| ||||    
T  17815571 agtaaatcagatggagagtagtcaaatcattggaggcaagggaagacctagaaaaattataagagaaactatttagaa 17815648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 225
Target Start/End: Original strand, 5338731 - 5338883
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta-----tatagtagatcagataga 172  Q
    |||||||||||||||| ||||| ||||||   |||||||| |||||||||| || |||||||||||| ||| || ||      | |||||||||||| ||    
T  5338731 cacctatagtagaaaagatggtggaaactgagcttaggtggtttgggcatgcagagagaagacctgtagatgctttagtaaggagagtagatcagatgga 5338830  T
Q  173 gaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaa 225  Q
    |   | ||| ||||||||||| ||  | |||||||||||||||||||||||||    
T  5338831 ggatattcagatcactagaggcagaagtagacctagaaaaactataagagaaa 5338883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 8343049 - 8342997
Alignment:
Q  180 caaatcactagaggtaggggaagacctagaaaaactataagagaaactattaa 232  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||| |||||    
T  8343049 caaatcactagagatagaggaagacctagaaaaactataagagaaacaattaa 8342997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 36339968 - 36339920
Alignment:
Q  183 atcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||    
T  36339968 atcactagaggtagaggaagacctagaaaaactatcagagaaactatta 36339920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 853956 - 853897
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    ||||||||||||||||| || |||||||||| |||| ||||| |||||||||||||||||    
T  853956 agtcaaatcactagaggcagaggaagacctaaaaaatctatacgagaaactattaagaag 853897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 141
Target Start/End: Complemental strand, 4001795 - 4001667
Alignment:
Q  9 gatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactag 108  Q
    |||| |||||||||||||||  ||  | ||||| ||||||| ||||||||||||||||    |||||  ||||||||||||||||  ||||||||| |||    
T  4001795 gatgagtggtaagactagacaaaataggattaggaatgacaccattagagagagagtg----ggggtagcacctatagtagaaaagttggtagaaaatag 4001700  T
Q  109 acttaggtgatttgggcatgtagtgagaagacc 141  Q
     ||||| || ||||| ||||||| ||| |||||    
T  4001699 gcttagatggtttggacatgtagagaggagacc 4001667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 8671854 - 8671986
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||||||| |||||||||||||||   |  | ||||| ||||||| |||||||||||| |      |||||  ||||||||||||||||  |||||    
T  8671854 ttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagtg------ggggtagcacctatagtagaaaagttggta 8671947  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaaga 139  Q
    |||| ||| ||||| || ||||||||||||| |||||||    
T  8671948 gaaaataggcttagatggtttgggcatgtagagagaaga 8671986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 37 - 141
Target Start/End: Original strand, 15085904 - 15086004
Alignment:
Q  37 attagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgaga 136  Q
    ||||| ||||||| ||||||||||||||||    |||||  ||||||||||||||||  ||||||||| ||| ||||| || ||||| ||||||| ||||    
T  15085904 attaggaatgacaccattagagagagagtg----ggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagaga 15085999  T
Q  137 agacc 141  Q
    |||||    
T  15086000 agacc 15086004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 228
Target Start/End: Complemental strand, 27848148 - 27847924
Alignment:
Q  5 gttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaa 104  Q
    |||||||| ||||||||||||||||| |  | || || ||| ||| |||||||||||||||    || |||  ||||| | |||||||| ||||||||||    
T  27848148 gttggatgagtggtaagactagacgggataggat-aggaataacaccattagagagagagt----tgtggtagcacctgtggtagaaaagatggtagaaa 27848054  T
Q  105 ctagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta-tat----agtagatcagatagagaggagtcaaatcactagaggtagggg 199  Q
     ||  |||||||| |||||||||| || |||||||||||| ||| ||||| |||    |||| ||||||| |||  ||||||  |||  |||||||| ||    
T  27848053 ataagcttaggtggtttgggcatgcagagagaagacctgtagatgctgtagtatgaagagtatatcagatggaggagagtcagctcagaagaggtagagg 27847954  T
Q  200 aagacc-tagaaaaactataagagaaacta 228  Q
    |||||| | |||||| ||||||||||||||    
T  27847953 aagacctttgaaaaattataagagaaacta 27847924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 232
Target Start/End: Complemental strand, 19969370 - 19969328
Alignment:
Q  190 gaggtaggggaagacctagaaaaactataagagaaactattaa 232  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  19969370 gaggtaggagaagacctagaaaaactataagagaaactattaa 19969328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 236
Target Start/End: Original strand, 15577432 - 15577588
Alignment:
Q  82 tatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtat-----atagtagatcagatagagagg 176  Q
    |||||||||||| ||||| ||| || |  ||||||| |||| |||||||  |||||||| || ||||||||||      | |||||||||||| || ||     
T  15577432 tatagtagaaaagatggtggaagctgggattaggtggtttgagcatgtatagagaagacatgcggattctgtagtaaggagagtagatcagatggatag- 15577530  T
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaag 236  Q
      ||| |||||||||||||| |||||| ||| |||||  |||||||||||||||||||||    
T  15577531 --tcacatcactagaggtagaggaagatctaaaaaaataataagagaaactattaagaag 15577588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 30834167 - 30834094
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    |||||||||||| ||  | |||||||||  |||||| || ||||||||||||||| ||||||||||||||||||    
T  30834167 agtagatcagatggaaggtagtcaaatcgatagagggagaggaagacctagaaaagctataagagaaactatta 30834094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 52073241 - 52073169
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    |||| ||||||| ||||| ||||||||||||||||| || |||||||||||||||||| |||  ||||||||||    
T  52073241 agtaaatcagat-gagagtagtcaaatcactagaggcagaggaagacctagaaaaactttaattgaaactatta 52073169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 29577307 - 29577255
Alignment:
Q  183 atcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    |||||||||||||| ||||||||||||||||||| || | |||||||||||||    
T  29577307 atcactagaggtagaggaagacctagaaaaactacaacataaactattaagaa 29577255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 33561029 - 33560973
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaag 233  Q
    ||||||||||||||||| || ||||| |||||||||||| |||| ||||||||||||    
T  33561029 agtcaaatcactagaggcagaggaagtcctagaaaaactgtaagggaaactattaag 33560973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 44008690 - 44008742
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactat 229  Q
    ||||||||||||||||| || |||||||||||||||| | |||||||||||||    
T  44008690 agtcaaatcactagaggcagaggaagacctagaaaaaatctaagagaaactat 44008742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 32083093 - 32082957
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    ||||| |||||| ||||||||||||||| |    | ||||| ||||||| ||||||||||||||||    |||||  ||||||||||||||||  |||||    
T  32083093 ttgcgctggatgagtggtaagactagacagggtaggattaggaatgacaccattagagagagagtg----ggggtagcacctatagtagaaaagttggta 32082998  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    |||| ||| ||||| || ||||| |||| || ||| |||||    
T  32082997 gaaaataggcttagatggtttggacatgcagagaggagacc 32082957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 49347741 - 49347605
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||||||| ||||||||||||||| | |  | ||||| ||||||| |||| ||||||||||     |||||  || |||||||||||||  |||||    
T  49347741 ttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccattggagagagagt----aggggtagcatctatagtagaaaagttggta 49347646  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    |||| ||| ||||| || ||||| |||| || |||||||||    
T  49347645 gaaaataggcttagatggtttggtcatgcagagagaagacc 49347605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 141
Target Start/End: Original strand, 51602063 - 51602126
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    ||||||||||||||||  ||||||||| ||| ||||| || ||||||||||||| |||||||||    
T  51602063 cacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacc 51602126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 231
Target Start/End: Original strand, 8628153 - 8628195
Alignment:
Q  189 agaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    |||||||| |||||||||||||||||||||| |||||||||||    
T  8628153 agaggtagaggaagacctagaaaaactataacagaaactatta 8628195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 235
Target Start/End: Original strand, 8796320 - 8796378
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||| ||||||||||| || |||||||| | ||||||| |||||||||||||||||||    
T  8796320 agtcagatcactagaggcagaggaagaccaataaaaactttaagagaaactattaagaa 8796378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 235
Target Start/End: Original strand, 12231476 - 12231534
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||||||||||| |||| | |||| || |||||||||||||||||| |||||||||||    
T  12231476 agtcaaatcactaaaggtggaggaatacttagaaaaactataagagagactattaagaa 12231534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 144
Target Start/End: Complemental strand, 13827992 - 13827926
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgt 144  Q
    |||||||||||||||| ||||| ||||||||  ||||||| ||||  ||||||| ||||||||||||    
T  13827992 cacctatagtagaaaagatggtggaaactagggttaggtggtttgaacatgtagagagaagacctgt 13827926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 7124233 - 7124310
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    |||||||||||| |||||  |||||| ||||| | |||| |||||| | | |||||||||||||||||||||| ||||    
T  7124233 agtagatcagatggagagcggtcaaaccactacaagtagaggaagatcaataaaaactataagagaaactattgagaa 7124310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 199 - 232
Target Start/End: Complemental strand, 8203283 - 8203250
Alignment:
Q  199 gaagacctagaaaaactataagagaaactattaa 232  Q
    ||||||||||||||||||||||||||||||||||    
T  8203283 gaagacctagaaaaactataagagaaactattaa 8203250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 34827254 - 34827221
Alignment:
Q  198 ggaagacctagaaaaactataagagaaactatta 231  Q
    ||||||||||||||||||||||||||||||||||    
T  34827254 ggaagacctagaaaaactataagagaaactatta 34827221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 43240729 - 43240591
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||||||| |||||||||||||||   |  | ||||  ||||||  |||||||||||||| | |  |||||  ||||||||||||||||| || ||    
T  43240729 ttgcgttggatgagtggtaagactagacatgataggattatgaatgacgccattagagagagagagtg--ggggtagcacctatagtagaaaaattgata 43240632  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    |||| ||| ||||| |  |||| |||||||| |||||||||    
T  43240631 gaaaataggcttagatagtttgagcatgtagagagaagacc 43240591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 10569310 - 10569266
Alignment:
Q  110 cttaggtgatttgggcatgtagtgagaagacctgtggattctgta 154  Q
    |||||||| ||||||||||||| |||||||||||| |||||||||    
T  10569310 cttaggtggtttgggcatgtagagagaagacctgtagattctgta 10569266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 151
Target Start/End: Original strand, 1661419 - 1661510
Alignment:
Q  60 gagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattct 151  Q
    ||||| ||| ||||||  |||||||||||||||| ||||| |||| ||| || || || |||| |||||||| |||||||||| | ||||||    
T  1661419 gagagagagttggggtagcacctatagtagaaaagatggtggaaaataggctcagatggtttgagcatgtagagagaagacctatagattct 1661510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 217
Target Start/End: Complemental strand, 13827844 - 13827701
Alignment:
Q  79 acctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtat-----atagtagatcagatagag 173  Q
    ||||||||||||||| | ||| ||||||||  | ||||| ||||| ||||||| |||||||  ||| |||||||||      | ||||||||| || ||     
T  13827844 acctatagtagaaaagacggtggaaactagggtaaggtggtttggacatgtagagagaagaagtgtagattctgtagtaaggagagtagatcatatggaa 13827745  T
Q  174 aggagtcaaatcactagaggtaggggaagacctagaaaaactat 217  Q
       ||||| ||||||||||| || ||||||||||||||||||||    
T  13827744 catagtcagatcactagaggcagaggaagacctagaaaaactat 13827701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 17640243 - 17640183
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataag 220  Q
    |||||||||||| ||| |||||||| ||||||||||||   ||| ||||||||||||||||||    
T  17640243 agtagatcagatggaggggagtcaattcactagaggta--agaaaacctagaaaaactataag 17640183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 136
Target Start/End: Original strand, 17815413 - 17815537
Alignment:
Q  5 gttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaa 104  Q
    ||||||||||||||| |||||||||| |  | |||||||||||||| |||||||||||| |||| | ||     || |||| | ||||| ||||| ||||    
T  17815413 gttggatgtgtggta-gactagacgggatagcattagaaatgacaatattagagagaga-tgaggtagg-----acttataatggaaaagatggtggaaa 17815505  T
Q  105 ctagacttaggtgatttgggcatgtagtgaga 136  Q
    |||| ||||| || ||||||||||||| ||||    
T  17815506 ctaggcttagttggtttgggcatgtagagaga 17815537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 154
Target Start/End: Complemental strand, 19908350 - 19908238
Alignment:
Q  38 ttagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaa 137  Q
    ||||||||||||| |||| |||||||||    || |||  ||||||||||| |||| ||||  ||||| |   ||||||||||||||||||||| |||||    
T  19908350 ttagaaatgacaaaattaaagagagagt----tgtggtagcacctatagtaaaaaagatgggggaaaccaagtttaggtgatttgggcatgtagagagaa 19908255  T
Q  138 gacctgtggattctgta 154  Q
     |||||| |||| ||||    
T  19908254 aacctgtagattatgta 19908238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 30396900 - 30396841
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    |||||||| |||||||||||||||||||   ||| ||| |||||||||||| ||||||||    
T  30396900 agtcaaataactagaggtaggggaagacacggaacaaccataagagaaactgttaagaag 30396841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 141
Target Start/End: Original strand, 39140527 - 39140590
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    |||||||||||||||| |||| | ||| | | |||||||| ||||||||||||| |||||||||    
T  39140527 cacctatagtagaaaagatggcaaaaaattggcttaggtggtttgggcatgtagagagaagacc 39140590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 227
Target Start/End: Original strand, 6641222 - 6641272
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaact 227  Q
    ||||||||||||||||||  ||| ||||||||| ||||||||||| |||||    
T  6641222 agtcaaatcactagaggtgtgggtagacctagacaaactataagaaaaact 6641272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 16822289 - 16822231
Alignment:
Q  86 gtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgt 144  Q
    ||||| || |||||||||||| | |||||||| ||||| ||||||| ||||||||||||    
T  16822289 gtagacaagatggtagaaactcggcttaggtggtttggacatgtagagagaagacctgt 16822231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 231
Target Start/End: Original strand, 26299208 - 26299250
Alignment:
Q  189 agaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    |||||||| |||| |||||| ||||||||||||||||||||||    
T  26299208 agaggtagaggaaaacctaggaaaactataagagaaactatta 26299250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 26444456 - 26444530
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaa 232  Q
    |||| |||||||  || ||| |||||| |||||| |||| |||||||| | ||||||||||||||||| ||||||    
T  26444456 agtatatcagatgaagtggattcaaattactagatgtagaggaagaccgacaaaaactataagagaaattattaa 26444530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 231
Target Start/End: Original strand, 39318252 - 39318294
Alignment:
Q  189 agaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    |||||||| ||||||||||| ||||||||||||||||| ||||    
T  39318252 agaggtagaggaagacctaggaaaactataagagaaaccatta 39318294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 46226480 - 46226406
Alignment:
Q  158 agtagatcagatagagaggagtcaaatc-actagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    ||||||||| |||||||||||||| ||| |  ||||||||  |||||| ||||||||| ||||| ||||||||||    
T  46226480 agtagatcatatagagaggagtcagatcaaaaagaggtagaagaagacttagaaaaaccataagtgaaactatta 46226406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 227
Target Start/End: Complemental strand, 52561748 - 52561710
Alignment:
Q  189 agaggtaggggaagacctagaaaaactataagagaaact 227  Q
    |||||||| ||||||| ||||||||||||||||||||||    
T  52561748 agaggtagaggaagacttagaaaaactataagagaaact 52561710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 231
Target Start/End: Complemental strand, 7762583 - 7762554
Alignment:
Q  202 gacctagaaaaactataagagaaactatta 231  Q
    ||||||||||||||||||||||||||||||    
T  7762583 gacctagaaaaactataagagaaactatta 7762554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 28511977 - 28511924
Alignment:
Q  172 agaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaa 225  Q
    |||| ||||| ||||||||||| || | |||||||||||||||||| |||||||    
T  28511977 agagtagtcagatcactagaggcagagaaagacctagaaaaactattagagaaa 28511924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 231
Target Start/End: Original strand, 29128919 - 29128948
Alignment:
Q  202 gacctagaaaaactataagagaaactatta 231  Q
    ||||||||||||||||||||||||||||||    
T  29128919 gacctagaaaaactataagagaaactatta 29128948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 29807989 - 29808026
Alignment:
Q  199 gaagacctagaaaaactataagagaaactattaagaag 236  Q
    |||||||||||||||||||||||||||| || ||||||    
T  29807989 gaagacctagaaaaactataagagaaacgatcaagaag 29808026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 38807861 - 38807788
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    |||||| ||||| |||  |||||| ||||  |||| ||||||||||||||  ||||||||||||||||| ||||    
T  38807861 agtagaccagatggaggagagtcagatcaaaagagctaggggaagacctaagaaaactataagagaaaccatta 38807788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 96
Target Start/End: Complemental strand, 40920823 - 40920782
Alignment:
Q  55 agagagagagtgagctggggtgacacctatagtagaaaaaat 96  Q
    |||||||||| ||| |||||| ||||||||||||||||||||    
T  40920823 agagagagagggagttggggtaacacctatagtagaaaaaat 40920782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 41560353 - 41560394
Alignment:
Q  190 gaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    |||||||  |||||||||||||| ||||||||||||||||||    
T  41560353 gaggtagaagaagacctagaaaagctataagagaaactatta 41560394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 107
Target Start/End: Original strand, 4379975 - 4380049
Alignment:
Q  37 attagaaatgacaacattagagagagag--tgagc--tggggtgacacctatagtagaaaaaatggtagaaacta 107  Q
    ||||||||||||||||||||||||||||  ||||   ||||||  || ||||||||||||| ||||| |||||||    
T  4379975 attagaaatgacaacattagagagagagagtgagtgttggggtagcaactatagtagaaaagatggtggaaacta 4380049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 142
Target Start/End: Original strand, 7921834 - 7921906
Alignment:
Q  70 tggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacct 142  Q
    |||||| | ||||||||||||||| ||||| ||||||||  ||| ||| ||||| ||||||| ||||| ||||    
T  7921834 tggggtaaaacctatagtagaaaagatggtggaaactaggtttatgtggtttggacatgtagagagaatacct 7921906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 19969693 - 19969645
Alignment:
Q  17 gtaagactagacggaaccgaattagaaatgacaacattagagagagagt 65  Q
    |||||||||||||  |  ||||||||||||||||||||||||| |||||    
T  19969693 gtaagactagacgtgatagaattagaaatgacaacattagagaaagagt 19969645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 231
Target Start/End: Complemental strand, 40228155 - 40228123
Alignment:
Q  199 gaagacctagaaaaactataagagaaactatta 231  Q
    |||||||||||||||||||||| ||||||||||    
T  40228155 gaagacctagaaaaactataagtgaaactatta 40228123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 235
Target Start/End: Original strand, 46388509 - 46388545
Alignment:
Q  199 gaagacctagaaaaactataagagaaactattaagaa 235  Q
    |||| |||||||||||||||||||||||| |||||||    
T  46388509 gaaggcctagaaaaactataagagaaacttttaagaa 46388545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 235
Target Start/End: Original strand, 46394953 - 46394989
Alignment:
Q  199 gaagacctagaaaaactataagagaaactattaagaa 235  Q
    |||| |||||||||||||||||||||||| |||||||    
T  46394953 gaaggcctagaaaaactataagagaaacttttaagaa 46394989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 1e-31; HSPs: 84)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 87 - 235
Target Start/End: Original strand, 11581460 - 11581613
Alignment:
Q  87 tagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtat-----atagtagatcagatagagaggagtca 181  Q
    ||||||| ||||||||||||||||||||||| |||||| |||||| |||||||| |||| ||| ||||      | |||| |||||||  ||  ||||||    
T  11581460 tagaaaagatggtagaaactagacttaggtggtttgggtatgtagagagaagacatgtgaattatgtagtaagaagagtacatcagatgtaggtgagtca 11581559  T
Q  182 aatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  11581560 aatcactagaggtatgagaagacctagaaaaactataagagaaactattaagaa 11581613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 235
Target Start/End: Complemental strand, 39601020 - 39600794
Alignment:
Q  10 atgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactaga 109  Q
    |||||||||||||||||| || |    |||||||||||||||||||||||||||||    ||||||   ||||||||||||||| ||||| ||||  |      
T  39601020 atgtgtggtaagactagatgggataagattagaaatgacaacattagagagagagt----tggggtagtacctatagtagaaaagatggtggaaaacaag 39600925  T
Q  110 cttaggtgatttgggcatgtagtgagaagacctgtggattctgtat-----atagtagatcagatagagaggagtcaaatcactagaggtaggggaagac 204  Q
    |||||||| ||| ||||||||  |||||||||||| |||||||||      | |||||||||||| |||   ||||| ||  | |||||||| |||||||    
T  39600924 cttaggtggttttggcatgtaaagagaagacctgtagattctgtagcgaggagagtagatcagatcgaggatagtcagattgcaagaggtagaggaagac 39600825  T
Q  205 ctagaaaaactataagagaaactattaagaa 235  Q
    |||||||||||||||||||||||||||||||    
T  39600824 ctagaaaaactataagagaaactattaagaa 39600794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 84 - 235
Target Start/End: Original strand, 21200561 - 21200717
Alignment:
Q  84 tagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta-----tatagtagatcagatagagaggag 178  Q
    |||||||||| ||||| ||||||||||||||||| ||||||||||||| |||||||| ||| ||||||| |      | ||||||||| || ||||| ||    
T  21200561 tagtagaaaagatggtggaaactagacttaggtggtttgggcatgtagagagaagacatgtagattctgcagtaaggagagtagatcacatggagagtag 21200660  T
Q  179 tcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    |||||||||||| || || |||||||||||||||||||| ||| |||||||| ||||    
T  21200661 tcaaatcactagggggagaggaagacctagaaaaactattagacaaactatttagaa 21200717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 232
Target Start/End: Complemental strand, 31454538 - 31454341
Alignment:
Q  36 aattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgag 135  Q
    ||||||||||||||||||||||||||| ||  | | |     |||||||||||||||| |||||||||||||||||| |||| |||| |||||||| |||    
T  31454538 aattagaaatgacaacattagagagagtgttggttag-----cacctatagtagaaaagatggtagaaactagactt-ggtggtttgtgcatgtagagag 31454445  T
Q  136 aagacctgtggattctgtatatag-----tagatcagatagagaggagtcaaatcactagag--gtaggggaagacctagaaaaactataagagaaacta 228  Q
    ||||  || ||||||||||  |||     |||||||||| ||| |||||||||||  |||||  |||||||| ||||||||||||||||||| |||||||    
T  31454444 aagaaatgcggattctgtagttaggagagtagatcagatggaggggagtcaaatctttagagatgtaggggatgacctagaaaaactataagggaaacta 31454345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 77 - 235
Target Start/End: Original strand, 37351413 - 37351576
Alignment:
Q  77 acacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtat-----atagtagatcagatag 171  Q
    |||| |||||||||||| ||||||||||||||||||  ||| ||||||||||| | |||||| | |||| || | |||      | |||||||||||| |    
T  37351413 acacttatagtagaaaagatggtagaaactagacttgagtggtttgggcatgtggagagaagtcatgtgaatgcggtagtaaggagagtagatcagatgg 37351512  T
Q  172 agaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    |  |||| |||||||||||||||||||||||||||||||||||||| |||||||| || |||||    
T  37351513 aagggaggcaaatcactagaggtaggggaagacctagaaaaactattagagaaacaatcaagaa 37351576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 52138734 - 52138873
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||||||| |||||||||||||||   |  | ||||| ||||||| ||||||||||||||||    |||||  ||||||||||||||||  |||||    
T  52138734 ttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtg----ggggtagcacctatagtagaaaagttggta 52138829  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacctgt 144  Q
    |||| ||| ||||| || ||||||||||||| ||||||||||||    
T  52138830 gaaaataggcttagatggtttgggcatgtagagagaagacctgt 52138873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 54128312 - 54128542
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    ||||||| |||| ||||||| ||||||||  |  | ||||  ||||||| |||||||||||| ||    ||||||  |||||||||||||||| ||||||    
T  54128312 ttgcgtttgatgagtggtaaaactagacgcgataggattatgaatgacaccattagagagagtgt----tggggtagcacctatagtagaaaagatggta 54128407  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta-----tatagtagatcagatagagaggagtcaaatcactagaggta 195  Q
    |||| ||| |||||||| ||||||||||||| || ||||||||| |||  || |     || |||||||||||| |||   ||||| |||   |||||||    
T  54128408 gaaaataggcttaggtggtttgggcatgtagagaaaagacctgtagatgatgcagtacgtagagtagatcagatggaggttagtcagatcgaaagaggta 54128507  T
Q  196 ggggaagacctagaaaaacta-taagagaaactat 229  Q
    | ||||||||||||||||||| |||||||||||||    
T  54128508 gaggaagacctagaaaaactattaagagaaactat 54128542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 140
Target Start/End: Original strand, 3987015 - 3987116
Alignment:
Q  35 gaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtga 134  Q
    |||||||||||||| | ||| ||||||||||    ||||||  |||||||||||||||| ||||||||||||||||||||||| |||||| |||||| ||    
T  3987015 gaattagaaatgacgatattggagagagagt----tggggtatcacctatagtagaaaagatggtagaaactagacttaggtggtttgggaatgtagaga 3987110  T
Q  135 gaagac 140  Q
    ||||||    
T  3987111 gaagac 3987116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 230
Target Start/End: Original strand, 38430855 - 38431012
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta-tat----agtagatcagataga 172  Q
    |||||||||||||||| |||||||||| ||| |||||||   |||||||||||| |||| ||||||  |||  |||| |||    |||||||||||| ||    
T  38430855 cacctatagtagaaaagatggtagaaaataggcttaggttgattgggcatgtagagagacgacctgcagatgttgtagtatgaagagtagatcagatgga 38430954  T
Q  173 gaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatt 230  Q
    |  |||||||||||  |||||||| ||||||| ||||||||||| |||||||||||||    
T  38430955 ggagagtcaaatcaaaagaggtagaggaagacttagaaaaactacaagagaaactatt 38431012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 28245371 - 28245503
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||||||| ||||||||||||| | | |  | ||||| ||||||| ||||||||||||||||    |||||  ||||||||||||||||  |||||    
T  28245371 ttgcgttggatgagtggtaagactagcctggataggattaggaatgacatcattagagagagagtg----ggggtagcacctatagtagaaaagttggta 28245466  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaa 137  Q
    |||| ||||||||| || ||||||||||||| |||||    
T  28245467 gaaaatagacttagatggtttgggcatgtagagagaa 28245503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 26990322 - 26990383
Alignment:
Q  175 ggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||    
T  26990322 ggagtcaaatcactcgaggtaggggaagacctagaaaaactattagagaaactatcaagaag 26990383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 31261131 - 31261055
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    |||||||||||| ||| | ||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||    
T  31261131 agtagatcagatggag-gtagtcaaatcactagaggcagaggaagacctagaaaaactataagagaaactatcaagaa 31261055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 2341062 - 2340830
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||| |||||||||||||||||||||||   |  ||||||||||||| |||||||||||| | ||    ||||||  ||||  | |||||||| |||||     
T  2341062 ttgcattggatgtgtggtaagactagacatgatagaattagaaatgaaaacattagagagggtgt----tggggtagcaccattcgtagaaaagatggtg 2340967  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtat--atagtagatcagatagagaggagtcaaatcactagaggtaggg 198  Q
    |||| |   |||| ||| |||| |||||||| || |||| || | |||| ||||   | |||||| || |||||| | ||||||||||||| || ||| |    
T  2340966 gaaaatcatcttacgtggtttgagcatgtagagaaaagatctatagattatgtagtgagagtagagcaaatagagggtagtcaaatcactaaagctagag 2340867  T
Q  199 gaagacctagaaaaactataagagaaactattaagaa 235  Q
     ||||||||| ||||||||||||||||||||||||||    
T  2340866 aaagacctaggaaaactataagagaaactattaagaa 2340830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 141
Target Start/End: Complemental strand, 49503897 - 49503766
Alignment:
Q  6 ttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaac 105  Q
    ||||||| ||||||||||||||||  |  | ||| | ||||||| |||||||||||||||    |  |||  |||||||||||||||| ||||||||||     
T  49503897 ttggatgagtggtaagactagacgagataggattgggaatgacaccattagagagagagt----tcaggtagcacctatagtagaaaagatggtagaaaa 49503802  T
Q  106 tagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    ||| |||||||| ||||||||||||| |||||||||    
T  49503801 taggcttaggtggtttgggcatgtagagagaagacc 49503766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 55 - 231
Target Start/End: Complemental strand, 19676378 - 19676198
Alignment:
Q  55 agagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta 154  Q
    |||||||||| | | ||||||  ||||||||||| |||| ||| |||||| | | |||||||| | | ||||||||| |||||||||||| ||| |||||    
T  19676378 agagagagagagtgttggggtagcacctatagtacaaaagatgatagaaaattggcttaggtggtattggcatgtagagagaagacctgtagatgctgta 19676279  T
Q  155 t-----atagtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
          | || |||||||||||||  |||||| ||||  ||||||| || |||||||||||||||| |||||||||||||||    
T  19676278 gtacaaagagaagatcagatagaggagagtcagatcaaaagaggtaagg-aagacctagaaaaactgtaagagaaactatta 19676198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 40981988 - 40982065
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    |||| |||||||| |||| ||||||||||||||||  |  ||||||||||||||||||||||||| ||||||||||||    
T  40981988 agtacatcagatatagagtagtcaaatcactagagacaaaggaagacctagaaaaactataagagtaactattaagaa 40982065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 78 - 142
Target Start/End: Complemental strand, 50960908 - 50960844
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacct 142  Q
    |||||||||||||||| |||||||||| ||| |||||||| ||||||||||||| ||||||||||    
T  50960908 cacctatagtagaaaagatggtagaaaataggcttaggtggtttgggcatgtagagagaagacct 50960844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 43254983 - 43255054
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactat 229  Q
    ||||| |||||| ||| | ||||| ||||||||||||||||| ||||||||||||||||| |||||||||||    
T  43254983 agtagttcagatggagggaagtcagatcactagaggtaggggtagacctagaaaaactatgagagaaactat 43255054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 236
Target Start/End: Original strand, 22902890 - 22902968
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    |||||||||||| ||| ||||| ||||||||||| |||||||||||  ||||||||| ||||||||| |||| ||||||    
T  22902890 agtagatcagatggaggggagttaaatcactagatgtaggggaagatatagaaaaaccataagagaagctataaagaag 22902968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 51448057 - 51447924
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||||||| ||||||||||||||| | |  | ||||| ||||||| ||||||||||||||     | ||||  ||||||||||||||||  |||||    
T  51448057 ttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccattagagagagag-----tagggtagcacctatagtagaaaagttggta 51447963  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaaga 139  Q
    |||| ||| ||||| |  ||||||||||||| |||||||    
T  51447962 gaaaataggcttagatagtttgggcatgtagagagaaga 51447924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 36820307 - 36820173
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||||||||||||||||||||||||  |  | |||||||||||| ||||||||||      ||| ||||||  |||||||| ||| ||| |||||     
T  36820307 ttgcgttggatgtgtggtaagactagacgagataggattagaaatgacgacattagaga------gagttggggtagcacctatattagcaaagatggtg 36820214  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    |||||||| |||||||| ||| | ||||||  |||||||||    
T  36820213 gaaactaggcttaggtggtttagacatgtaaagagaagacc 36820173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 231
Target Start/End: Original strand, 39235154 - 39235303
Alignment:
Q  87 tagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta-----tatagtagatcagatagagaggagtca 181  Q
    ||||||| |||||||||| ||| |||||||| ||||||||||||| |||||||||||| |||  ||||      | |||||||||||| |||   |||||    
T  39235154 tagaaaagatggtagaaaataggcttaggtggtttgggcatgtagagagaagacctgtagatgttgtagtacgaagagtagatcagatggaggaaagtca 39235253  T
Q  182 aatcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
     ||||  |||||||| |||||||| | |||||||||| || |||||||||    
T  39235254 gatcaaaagaggtagaggaagacccaaaaaaactataggataaactatta 39235303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 29374941 - 29375017
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta 154  Q
    ||||||| | |||||| |||||||||||| |||||||||||||||||| ||||| || ||||||||| |||| ||||    
T  29374941 cacctattggagaaaagatggtagaaactcgacttaggtgatttgggcttgtagagaaaagacctgtagattttgta 29375017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 144
Target Start/End: Original strand, 19736934 - 19737070
Alignment:
Q  5 gttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtga-cacctatagtagaaaaaatggtagaa 103  Q
    |||||||| ||||||||||||||||| |    ||||||| ||| | |||||||||||||||    |||||  | |||||||||||||||| |||||||||    
T  19736934 gttggatgagtggtaagactagacgggatacgattagaagtgaaatcattagagagagagt----tgggggcagcacctatagtagaaaagatggtagaa 19737029  T
Q  104 actagacttaggtgatttgggcatgtagtgagaagacctgt 144  Q
    | |||  ||||||| |||| ||||| || ||||||||||||    
T  19737030 aataggtttaggtggtttgagcatgcagagagaagacctgt 19737070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 231
Target Start/End: Complemental strand, 45289434 - 45289208
Alignment:
Q  9 gatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctat--agtagaaaaaatggtagaaact 106  Q
    |||||||| ||||||||||||| |    |||||||||||| ||||||||||||||  ||| ||||||  |||||||  ||||||||| ||||| |||| |    
T  45289434 gatgtgtgataagactagacgggataagattagaaatgac-acattagagagaga--gagttggggtagcacctattcagtagaaaagatggtggaaaat 45289338  T
Q  107 agacttaggtgatttgggcatgtagtgagaagacctgtggattctgta-----tatagtagatcagatagagaggagtcaaatcactagaggtaggggaa 201  Q
    || |||||||| |||||||| |||| ||||| || ||| |||| ||||      | |||||||||||| |||   ||| | || || |||| ||| ||||    
T  45289337 aggcttaggtggtttgggcacgtagagagaacacttgtagattttgtagtaagaagagtagatcagatggaggatagttagattacaagagatagaggaa 45289238  T
Q  202 gacctagaaaaactataagagaaactatta 231  Q
    || |||  ||||||||||||||||||||||    
T  45289237 gatctatgaaaactataagagaaactatta 45289208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 47233944 - 47233808
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||||||| |||||||||||||||   |    ||||||||||||| ||||||||||||| ||    | |||  ||||||||||||||||  |||||    
T  47233944 ttgcgttggatgagtggtaagactagacatgataagattagaaatgacaccattagagagagaatg----gaggtagcacctatagtagaaaagttggta 47233849  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    |||| ||| ||||| || ||||| ||||||| |||||||||    
T  47233848 gaaaataggcttagatggtttggacatgtagagagaagacc 47233808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 151
Target Start/End: Original strand, 50249318 - 50249467
Alignment:
Q  4 cgttggatgtgtggtaagactagacg-gaaccga--attagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||||||||||| ||||||||| ||   ||  ||||||||||| |||||||||||||||||    ||||||  | | |||||||||||| |||||     
T  50249318 cgttggatgtgtggtaggactagacgagataggatgattagaaatgataacattagagagagagt----tggggtagcgcgtatagtagaaaagatggtg 50249413  T
Q  101 gaaactagactta---ggtgatttgggcatgtagtgagaagacctgtggattct 151  Q
    |||||||||||||   |||| ||||||||||||| | |||||| ||| ||||||    
T  50249414 gaaactagacttaggtggtggtttgggcatgtagagtgaagacatgtagattct 50249467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 54278954 - 54279090
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||||||  |||||||||||||||   |  ||||||| ||||||| |||||||||||||||     |||||  ||||||||||||||||  |||||    
T  54278954 ttgcgttggataagtggtaagactagacaagatagaattaggaatgacaccattagagagagagt----aggggtagcacctatagtagaaaagttggta 54279049  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    |||| ||| |||||  | |||||||| |||| |||||||||    
T  54279050 gaaaataggcttagacggtttgggcacgtagagagaagacc 54279090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 144
Target Start/End: Complemental strand, 345055 - 344920
Alignment:
Q  5 gttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaa 104  Q
    ||||||| |||||||||||||||||  |  | |||||||||||  ||||||||||||||||    ||||||  ||| |||||||||||| ||| ||||||    
T  345055 gttggatttgtggtaagactagacgagataggattagaaatgatgacattagagagagagt----tggggtagcacttatagtagaaaagatgttagaaa 344960  T
Q  105 ctagacttaggtgatttgggcatgtagtgagaagacctgt 144  Q
     ||| |||| ||  ||||| ||||||| |||| |||||||    
T  344959 ataggcttaagtagtttggtcatgtagagagaggacctgt 344920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 235
Target Start/End: Original strand, 46146207 - 46146265
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||||||||||||||| |  |||||| ||||||||||||||| |||||||||||||||    
T  46146207 agtcaaatcactagaggcataggaagatctagaaaaactataaaagaaactattaagaa 46146265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 144
Target Start/End: Original strand, 38060399 - 38060504
Alignment:
Q  39 tagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaag 138  Q
    |||||| |||| | |||||||||||| |||  |||||  |||||||| |||||||  ||||||||| ||| ||||| || ||||| ||||||| ||||||    
T  38060399 tagaaaagacaccgttagagagagagagagtgggggtagcacctataatagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaag 38060498  T
Q  139 acctgt 144  Q
    ||||||    
T  38060499 acctgt 38060504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 154
Target Start/End: Complemental strand, 39535716 - 39535639
Alignment:
Q  77 acacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta 154  Q
    ||||||||||||||||| |||||||||||  | |||||||| ||| |||| |||| |||||||||| | |||||||||    
T  39535716 acacctatagtagaaaagatggtagaaacccggcttaggtggtttaggcaagtagagagaagacctatagattctgta 39535639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 232
Target Start/End: Original strand, 27893207 - 27893255
Alignment:
Q  184 tcactagaggtaggggaagacctagaaaaactataagagaaactattaa 232  Q
    ||||| ||||||| |||||||||||||| ||||||||||||||||||||    
T  27893207 tcacttgaggtagaggaagacctagaaagactataagagaaactattaa 27893255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 31453214 - 31453138
Alignment:
Q  78 cacctatagta-gaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgt 153  Q
    ||||||||||| ||||| ||||||||||||||||||||||  ||| ||||||||| |||||||| | || |||||||    
T  31453214 cacctatagtaagaaaagatggtagaaactagacttaggttgttttggcatgtagagagaagacgtctgaattctgt 31453138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 33755507 - 33755459
Alignment:
Q  183 atcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    ||||||||||| || |||| |||||||||||||||||||||||||||||    
T  33755507 atcactagaggcagaggaaaacctagaaaaactataagagaaactatta 33755459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 41842786 - 41842710
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta 154  Q
    |||||||||||||||| ||||| ||||| || |||||||| |||||| |||||| ||||||| | || |||||||||    
T  41842786 cacctatagtagaaaagatggtggaaaccagtcttaggtggtttgggtatgtagagagaagagcggtagattctgta 41842710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 22007 - 22142
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    ||||| |||||| |||||||||||||||   |  | ||||| |||| || ||||||||||||||||    |||||  ||||||||||||||||  |||||    
T  22007 ttgcgctggatgagtggtaagactagacatgataggattaggaatgtcaccattagagagagagtg----ggggtagcacctatagtagaaaagttggta 22102  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    |||| ||| ||||| || ||||| ||||||| |||||||||    
T  22103 gaaa-taggcttagatggtttggacatgtagagagaagacc 22142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 139
Target Start/End: Original strand, 3365049 - 3365149
Alignment:
Q  35 gaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtga 134  Q
    |||||||||||||||| ||| |||||||  |    |||||| |||||| ||||  ||||||||||||||||||||||||  ||||||  |||||||| ||    
T  3365049 gaattagaaatgacaatattggagagagttt----tggggtaacacctctagttaaaaaaatggtagaaactagacttatatgattttagcatgtagaga 3365144  T
Q  135 gaaga 139  Q
    |||||    
T  3365145 gaaga 3365149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 141
Target Start/End: Original strand, 25191384 - 25191447
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    ||||||||||||||||| ||| ||||| ||||||||| || ||||| ||||||| |||||||||    
T  25191384 cacctatagtagaaaaattggaagaaaatagacttagatggtttggacatgtagagagaagacc 25191447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 231
Target Start/End: Complemental strand, 42510289 - 42510133
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtat-----atagtagatcagataga 172  Q
    |||||||||||||||| || || |||| ||| |||||||| ||||| |||||||  ||||||||| | |||| |||       | |||||||||||| ||    
T  42510289 cacctatagtagaaaagatagtggaaaataggcttaggtggtttggacatgtag--agaagacctatagattttgtggtaaggagagtagatcagatgga 42510192  T
Q  173 gaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    |   ||||| ||||||||||| |  |||||||||||||||||||| |||||||| ||||    
T  42510191 ggatagtcagatcactagaggcaaaggaagacctagaaaaactatcagagaaaccatta 42510133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 46568054 - 46568113
Alignment:
Q  5 gttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagag 64  Q
    |||||||||||| |||||||||||   |  ||||||||||||||||||||||||||||||    
T  46568054 gttggatgtgtgttaagactagaccagattgaattagaaatgacaacattagagagagag 46568113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 224
Target Start/End: Complemental strand, 48734406 - 48734259
Alignment:
Q  82 tatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta-----tatagtagatcagatagagagg 176  Q
    |||||||||| | |||||||||| ||| |||||||| ||||||||||||| ||||||| |||| ||  |||||      | |||||||||||| ||||      
T  48734406 tatagtagaacagatggtagaaaataggcttaggtggtttgggcatgtagagagaagaactgtagaggctgtagtacgaagagtagatcagatggagatt 48734307  T
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaa 224  Q
    ||| | ||||  |||||||| ||||| ||| |||||||||| ||||||    
T  48734306 agttagatcaaaagaggtagaggaaggccttgaaaaactattagagaa 48734259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 48953700 - 48953645
Alignment:
Q  75 tgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgta 130  Q
    |||||||||||||||||||  ||||||||| || |||||| |||||||||||||||    
T  48953700 tgacacctatagtagaaaagttggtagaaaataaacttagatgatttgggcatgta 48953645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 144
Target Start/End: Original strand, 19757907 - 19757973
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgt 144  Q
    |||||||||||||||| |||||||||| |||  ||||||| |||| ||||| || ||||||||||||    
T  19757907 cacctatagtagaaaagatggtagaaaataggtttaggtggtttgagcatgcagagagaagacctgt 19757973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 235
Target Start/End: Original strand, 37228193 - 37228251
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||||||||||||||| || | |||||||| |||||| ||||| ||||||||||||||    
T  37228193 agtcaaatcactagaggcagagaaagacctataaaaacgataagggaaactattaagaa 37228251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 40116639 - 40116585
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    ||||| ||||||||||  |  ||||||||||||||||||||||||||||||||||    
T  40116639 agtcagatcactagagccaaaggaagacctagaaaaactataagagaaactatta 40116585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 84 - 154
Target Start/End: Original strand, 46140445 - 46140515
Alignment:
Q  84 tagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgta 154  Q
    |||||||||| | ||| ||||||||||| ||||| ||||| ||| ||| |||||||||||| |||||||||    
T  46140445 tagtagaaaagacggtggaaactagactcaggtggtttggacatatagagagaagacctgtagattctgta 46140515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 140
Target Start/End: Original strand, 49841626 - 49841688
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagac 140  Q
    |||||||| ||||||| ||||| ||||||||||| ||||| ||||||| ||||| ||||||||    
T  49841626 cacctatattagaaaagatggtggaaactagactaaggtggtttgggcgtgtagagagaagac 49841688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 231
Target Start/End: Complemental strand, 54365134 - 54365092
Alignment:
Q  189 agaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    ||||| || ||||||||||||||||||||||||||||||||||    
T  54365134 agaggcagaggaagacctagaaaaactataagagaaactatta 54365092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 141
Target Start/End: Original strand, 5168777 - 5168902
Alignment:
Q  16 ggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttagg 115  Q
    ||||||||||||| | |  | ||||| ||||||| |||||||||||||| |||  |||||  ||||||| ||||||||  ||||||||| ||  |||||     
T  5168777 ggtaagactagacaggataggattaggaatgacaccattagagagagagagagtgggggtagcacctatggtagaaaagttggtagaaaatacgcttaga 5168876  T
Q  116 tgatttgggcatgtagtgagaagacc 141  Q
    || ||||  ||||||| |||||||||    
T  5168877 tggtttgaacatgtagagagaagacc 5168902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 131
Target Start/End: Original strand, 26490322 - 26490375
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtag 131  Q
    |||||||||||||||| |||||||||| ||| |||||||| ||||| |||||||    
T  26490322 cacctatagtagaaaagatggtagaaaataggcttaggtggtttggacatgtag 26490375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 38054685 - 38054624
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagag 62  Q
    |||||||| ||| ||||||||||||||||| |  | ||||||||||| ||||||||||||||    
T  38054685 ttgcgttgaatgggtggtaagactagacgggataggattagaaatgataacattagagagag 38054624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 139
Target Start/End: Original strand, 38850131 - 38850188
Alignment:
Q  82 tatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaaga 139  Q
    ||||||||||||  ||||||||| ||||||||| || ||||||||||||| |||||||    
T  38850131 tatagtagaaaagttggtagaaaatagacttagatggtttgggcatgtagagagaaga 38850188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 48508327 - 48508400
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    |||||||||||| |||  ||||||  |||  |||||||| ||||||||||| ||||||||||||||||| ||||    
T  48508327 agtagatcagatggaggagagtcaggtcaaaagaggtagaggaagacctaggaaaactataagagaaaccatta 48508400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 226
Target Start/End: Original strand, 659541 - 659685
Alignment:
Q  87 tagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtat-----atagtagatcagatagagaggagtca 181  Q
    ||||||| || |||||||||   |||||||| ||||||||||||| ||||| |  ||| |||||||||      | ||| || ||||  ||||| ||| |    
T  659541 tagaaaagatagtagaaacttagcttaggtggtttgggcatgtagagagaaaatttgtagattctgtagtaagcagagttgaccagagggagagtagtga 659640  T
Q  182 aatcactagaggtaggggaagacctagaaaaactataagagaaac 226  Q
    |||||||||||| |  |||||||||||||||||| ||||||||||    
T  659641 aatcactagaggcaaaggaagacctagaaaaactgtaagagaaac 659685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 26388488 - 26388540
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgta 130  Q
    |||||||| ||||||| |||||||||| |||  ||||||||||||||||||||    
T  26388488 cacctataatagaaaagatggtagaaaataggtttaggtgatttgggcatgta 26388540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 235
Target Start/End: Complemental strand, 36820122 - 36820090
Alignment:
Q  203 acctagaaaaactataagagaaactattaagaa 235  Q
    |||||||||||||||||||||||||||||||||    
T  36820122 acctagaaaaactataagagaaactattaagaa 36820090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 11284102 - 11284160
Alignment:
Q  175 ggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 234  Q
    ||||| || ||| |||| |||| ||||||||||||||| |||||||||||||||||||||    
T  11284102 ggagtaaattcattagatgtagaggaagacctagaaaa-ctataagagaaactattaaga 11284160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 148
Target Start/End: Original strand, 26990234 - 26990285
Alignment:
Q  97 ggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggat 148  Q
    |||||||||||||||||||||  | |||||||||| |||||||| |||||||    
T  26990234 ggtagaaactagacttaggtgggtggggcatgtagagagaagacatgtggat 26990285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 232
Target Start/End: Complemental strand, 30294280 - 30294237
Alignment:
Q  189 agaggtaggggaagacctagaaaaactataagagaaactattaa 232  Q
    |||||||| ||||||||||||| |||||||||| ||||||||||    
T  30294280 agaggtagaggaagacctagaagaactataagataaactattaa 30294237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 231
Target Start/End: Complemental strand, 34844721 - 34844690
Alignment:
Q  200 aagacctagaaaaactataagagaaactatta 231  Q
    ||||||||||||||||||||||||||||||||    
T  34844721 aagacctagaaaaactataagagaaactatta 34844690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 235
Target Start/End: Original strand, 43308696 - 43308731
Alignment:
Q  200 aagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||||||||||||||| ||||||||||||||||||    
T  43308696 aagacctagaaaaactacaagagaaactattaagaa 43308731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 231
Target Start/End: Complemental strand, 45487000 - 45486969
Alignment:
Q  200 aagacctagaaaaactataagagaaactatta 231  Q
    ||||||||||||||||||||||||||||||||    
T  45487000 aagacctagaaaaactataagagaaactatta 45486969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 231
Target Start/End: Complemental strand, 53998802 - 53998755
Alignment:
Q  184 tcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    |||||||||| |  |||||||| |||||||||||||||||||||||||    
T  53998802 tcactagaggcaaaggaagacccagaaaaactataagagaaactatta 53998755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 14783673 - 14783727
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    ||||| ||| ||| ||||||  ||||||||||||||||||| |||||||||||||    
T  14783673 agtcagatccctaaaggtagatgaagacctagaaaaactatcagagaaactatta 14783727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 140
Target Start/End: Complemental strand, 33272293 - 33272235
Alignment:
Q  82 tatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagac 140  Q
    ||||||||||||  ||||||||| ||| ||||| || ||||||||||||| ||||||||    
T  33272293 tatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagac 33272235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 235
Target Start/End: Original strand, 37228039 - 37228097
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||||||||| ||||| || | |||||||| |||||| ||||| ||||||||||||||    
T  37228039 agtcaaatcaccagaggcagagaaagacctataaaaacgataagggaaactattaagaa 37228097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 37487218 - 37487164
Alignment:
Q  77 acacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtag 131  Q
    |||| |||||||||||| ||| |||||||||||| || ||| |||||||||||||    
T  37487218 acacatatagtagaaaatatgttagaaactagacctatgtggtttgggcatgtag 37487164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 144
Target Start/End: Complemental strand, 43695040 - 43694974
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgt 144  Q
    ||||||||||||||||  ||||||||| |   ||||| || ||||||||||||| ||||||||||||    
T  43695040 cacctatagtagaaaagttggtagaaaatttgcttagatggtttgggcatgtagagagaagacctgt 43694974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 131
Target Start/End: Original strand, 46568132 - 46568166
Alignment:
Q  97 ggtagaaactagacttaggtgatttgggcatgtag 131  Q
    |||||||||||||||||| ||||||||||||||||    
T  46568132 ggtagaaactagacttagttgatttgggcatgtag 46568166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 4472614 - 4472553
Alignment:
Q  79 acctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagac 140  Q
    ||||||| ||||||| |||||||||| ||| |||| || |||||  ||||||||||||||||    
T  4472614 acctataatagaaaagatggtagaaaatagtcttaagtaatttgaacatgtagtgagaagac 4472553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 7278552 - 7278620
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaact 227  Q
    |||||||| ||| ||||| |||||||| |||| || ||  |||| |||||||||||||||||||||||||    
T  7278552 agtagatcggatggagagtagtcaaattacta-agatattggaaaacctagaaaaactataagagaaact 7278620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 235
Target Start/End: Complemental strand, 21427732 - 21427695
Alignment:
Q  198 ggaagacctagaaaaactataagagaaactattaagaa 235  Q
    |||||||| ||||||| |||||||||||||||||||||    
T  21427732 ggaagaccaagaaaaattataagagaaactattaagaa 21427695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 29475805 - 29475855
Alignment:
Q  183 atcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||||||||| || ||||||||||||||| |||||  |||||||||||||||    
T  29475805 atcactagaggcagaggaagacctagaaaagctata--agaaactattaagaa 29475855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 34719230 - 34719197
Alignment:
Q  198 ggaagacctagaaaaactataagagaaactatta 231  Q
    |||||||||||||||||||||| |||||||||||    
T  34719230 ggaagacctagaaaaactataaaagaaactatta 34719197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 141
Target Start/End: Original strand, 35033130 - 35033216
Alignment:
Q  51 cattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    ||||||||||||||||    |||||  ||||||||||||||||  ||||||||| ||| ||||  || ||||| ||||||| |||||||||    
T  35033130 cattagagagagagtg----ggggtagcacctatagtagaaaagttggtagaaaataggcttatatggtttggacatgtagagagaagacc 35033216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 209
Target Start/End: Complemental strand, 40743320 - 40743287
Alignment:
Q  176 gagtcaaatcactagaggtaggggaagacctaga 209  Q
    ||||||||||||||||| ||||||||||||||||    
T  40743320 gagtcaaatcactagagttaggggaagacctaga 40743287  T

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Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 41482304 - 41482255
Alignment:
Q  183 atcactagaggtaggggaagacctagaaaaac-tataagagaaactatta 231  Q
    ||||||||||| || ||||||||||||||||| | |||||||||||||||    
T  41482304 atcactagaggcagaggaagacctagaaaaacttttaagagaaactatta 41482255  T

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Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 23534735 - 23534687
Alignment:
Q  183 atcactagaggtaggggaagacctagaaaaactataagagaaactatta 231  Q
    |||||||||||||| |||||||| | ||||| ||||| |||||||||||    
T  23534735 atcactagaggtagaggaagacccaaaaaaattataacagaaactatta 23534687  T

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Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 65
Target Start/End: Original strand, 29600869 - 29600897
Alignment:
Q  37 attagaaatgacaacattagagagagagt 65  Q
    |||||||||||||||||||||||||||||    
T  29600869 attagaaatgacaacattagagagagagt 29600897  T

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Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 37598359 - 37598284
Alignment:
Q  158 agtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 234  Q
    ||||||||||||  || | ||| ||||||| ||||| ||  || |||||||||||||| ||||||||||||||||||    
T  37598359 agtagatcagatgaagcgtagttaaatcaccagaggcagaagatgacctagaaaaact-taagagaaactattaaga 37598284  T

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Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 44443353 - 44443317
Alignment:
Q  199 gaagacctagaaaaactataagagaaactattaagaa 235  Q
    |||| |||||||||||||||||||||||| |||||||    
T  44443353 gaaggcctagaaaaactataagagaaacttttaagaa 44443317  T

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Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 45493881 - 45493805
Alignment:
Q  159 gtagatcagatagagaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    |||||||||||  |||| ||||||| ||  ||||| || || | ||||||| ||||||||| |||||||||||||||    
T  45493881 gtagatcagatcaagagtagtcaaaccagcagaggcagagggatacctagataaactataaaagaaactattaagaa 45493805  T

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Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 232
Target Start/End: Complemental strand, 46431844 - 46431795
Alignment:
Q  179 tcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaa 232  Q
    ||||||||||||||| ||    ||| ||||||||||||||||||||||||||||    
T  46431844 tcaaatcactagaggcag----agaactagaaaaactataagagaaactattaa 46431795  T

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Target: scaffold0018 (Bit Score: 52; Significance: 6e-21; HSPs: 4)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 31402 - 31538
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    |||||||||||| ||||||||||||||| | |    ||||| ||||||| ||||||||||||||||    |||||  ||||||||||||||||  |||||    
T  31402 ttgcgttggatgagtggtaagactagacaggataagattaggaatgacaccattagagagagagtg----ggggtagcacctatagtagaaaagttggta 31497  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagacc 141  Q
    |||| ||| ||||| || ||||||||||||| |||||||||    
T  31498 gaaaataggcttagatggtttgggcatgtagagagaagacc 31538  T

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Target: scaffold0018; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 178591 - 178533
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 235  Q
    ||||| |||||||||||  | | ||||||||||||||||||||||||||||||||||||    
T  178591 agtcatatcactagaggcggagtaagacctagaaaaactataagagaaactattaagaa 178533  T

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Target: scaffold0018; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 78 - 142
Target Start/End: Complemental strand, 44143 - 44079
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacct 142  Q
    |||||||||||||||| ||||  |||| ||| |||||||| ||||||||||||| ||||||||||    
T  44143 cacctatagtagaaaagatggcggaaaataggcttaggtggtttgggcatgtagagagaagacct 44079  T

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Target: scaffold0018; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 44039 - 43991
Alignment:
Q  177 agtcaaatcactagaggtaggggaagacctagaaaaactataagagaaa 225  Q
    ||||| |||||||||||||||||| | |||| |||||||||||| ||||    
T  44039 agtcagatcactagaggtaggggaggtcctacaaaaactataagtgaaa 43991  T

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Target: scaffold0325 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 236
Target Start/End: Original strand, 11805 - 11967
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtat-----atagtagatcagataga 172  Q
    ||||||| |||||||| ||||||| |||| | |||||||| ||||||||||||| ||||||| |||| | |  |||||     | |||||||| | | ||    
T  11805 cacctattgtagaaaagatggtaggaactcggcttaggtggtttgggcatgtagagagaagatctgtagcta-tgtattgaggagagtagatccggtgga 11903  T
Q  173 gaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    | | ||| ||||||||||||| |   ||||| ||||||||||||||||||||||||||||||||    
T  11904 gggtagtgaaatcactagaggcaaaagaagaactagaaaaactataagagaaactattaagaag 11967  T

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Target: scaffold0570 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 232
Target Start/End: Complemental strand, 1223 - 1064
Alignment:
Q  78 cacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaagacctgtggattctgtat-----atagtagatcagataga 172  Q
    ||||||||||||||||  ||||||||| ||| ||||| || ||||| ||||||| ||||||||| || ||| | ||       | ||||||||| || ||    
T  1223 cacctatagtagaaaagttggtagaaaataggcttagatggtttggccatgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatgga 1124  T
Q  173 gaggagtcaaatcactagaggtaggggaagacctagaaaaactataagagaaactattaa 232  Q
    || ||||||||| |  |||||||| ||||||||||| |||||||| |||||||| |||||    
T  1123 gaagagtcaaattaaaagaggtagaggaagacctaggaaaactattagagaaaccattaa 1064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 127
Target Start/End: Complemental strand, 101051 - 101001
Alignment:
Q  77 acacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcat 127  Q
    ||||||||||||||||||||||| ||||||||||||||||| || ||||||    
T  101051 acacctatagtagaaaaaatggttgaaactagacttaggtggttcgggcat 101001  T

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Target: scaffold0036 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 4620 - 4484
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    ||||||||||||  ||||||||||||||   |  | |||| |||||||| |||||||||||||| |   ||||||| ||||||||||||||||  |||||    
T  4620 ttgcgttggatgaatggtaagactagacatgataggattataaatgacaccattagagagagagag---tggggtggcacctatagtagaaaagttggta 4524  T
Q  101 gaaactagacttaggtgatttgggcatgtagtgagaagac 140  Q
     ||| ||| ||||| |  |||||||||||||  |||||||    
T  4523 aaaaataggcttagatagtttgggcatgtagaaagaagac 4484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 11946 - 11818
Alignment:
Q  1 ttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggta 100  Q
    ||||| |||||| | |||||||||||||  ||  | ||||| ||||||| ||| |||||||||  | |  |||||  ||||||||||||||||  |||||    
T  11946 ttgcgctggatgagcggtaagactagacataataggattaggaatgacaccatcagagagagatagtg--ggggtagcacctatagtagaaaagttggta 11849  T
Q  101 gaaactagacttaggtgatttgggcatgtag 131  Q
    |||| ||| ||||| ||||||||||||||||    
T  11848 gaaaataggcttagatgatttgggcatgtag 11818  T

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Target: scaffold0157 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 25789 - 25684
Alignment:
Q  5 gttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaa 104  Q
    |||||||| |||||||||||||||   |  | ||||| ||||||| ||||||||||||||||    |||||  ||||||||||||||||  |||||||||    
T  25789 gttggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtg----ggggtagcacctatagtagaaaagttggtagaaa 25694  T
Q  105 ctagacttag 114  Q
     ||| |||||    
T  25693 ataggcttag 25684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 139
Target Start/End: Original strand, 82697 - 82789
Alignment:
Q  43 aatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaaga 139  Q
    ||||||| ||||||||||||||||    |||||  ||||||||||||||||  ||||||||| | | ||||| |||||||| ||| ||| |||||||    
T  82697 aatgacaccattagagagagagtg----ggggtagcacctatagtagaaaagttggtagaaaatgggcttagatgatttggacatatagagagaaga 82789  T

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Target: scaffold1609 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1609
Description:

Target: scaffold1609; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 1111 - 1065
Alignment:
Q  190 gaggtaggggaagacctagaaaaactataagagaaactattaagaag 236  Q
    ||||||||||  |||||||||||||| ||||||||||||||| ||||    
T  1111 gaggtaggggtggacctagaaaaactgtaagagaaactattaggaag 1065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1259 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1259
Description:

Target: scaffold1259; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 231
Target Start/End: Complemental strand, 1665 - 1636
Alignment:
Q  202 gacctagaaaaactataagagaaactatta 231  Q
    ||||||||||||||||||||||||||||||    
T  1665 gacctagaaaaactataagagaaactatta 1636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 227
Target Start/End: Complemental strand, 58387 - 58347
Alignment:
Q  187 ctagaggtaggggaagacctagaaaaactataagagaaact 227  Q
    ||||||| || ||||||||||||||||| ||||||||||||    
T  58387 ctagaggcagaggaagacctagaaaaacgataagagaaact 58347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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