View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8114_high_4 (Length: 239)

Name: NF8114_high_4
Description: NF8114
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8114_high_4
NF8114_high_4
[»] chr4 (78 HSPs)
chr4 (17-224)||(47464435-47464643)
chr4 (16-132)||(22129979-22130095)
chr4 (16-134)||(16821400-16821518)
chr4 (20-132)||(49746897-49747009)
chr4 (17-132)||(35311293-35311409)
chr4 (16-132)||(47773088-47773203)
chr4 (18-132)||(35380404-35380518)
chr4 (16-132)||(49176003-49176119)
chr4 (18-176)||(6643731-6643887)
chr4 (18-132)||(51624723-51624836)
chr4 (16-132)||(33790800-33790917)
chr4 (16-132)||(38405171-38405287)
chr4 (16-134)||(44536265-44536383)
chr4 (18-135)||(53412041-53412158)
chr4 (16-132)||(11907668-11907783)
chr4 (16-88)||(17237365-17237437)
chr4 (16-176)||(40122923-40123083)
chr4 (17-132)||(34360592-34360706)
chr4 (16-132)||(5841496-5841612)
chr4 (16-108)||(49428411-49428502)
chr4 (16-135)||(17114374-17114492)
chr4 (16-135)||(2942713-2942834)
chr4 (18-132)||(42616974-42617087)
chr4 (18-131)||(35998750-35998861)
chr4 (16-87)||(21240773-21240844)
chr4 (17-88)||(32884781-32884852)
chr4 (16-132)||(2066728-2066841)
chr4 (18-107)||(43237203-43237293)
chr4 (18-107)||(6609722-6609811)
chr4 (17-132)||(26147685-26147802)
chr4 (19-132)||(36985723-36985835)
chr4 (18-135)||(54506722-54506838)
chr4 (40-132)||(28911249-28911340)
chr4 (16-132)||(52859868-52859978)
chr4 (16-135)||(52247497-52247614)
chr4 (18-132)||(7061735-7061848)
chr4 (17-134)||(2653355-2653471)
chr4 (40-132)||(28500976-28501069)
chr4 (17-69)||(11288699-11288751)
chr4 (16-131)||(30682265-30682380)
chr4 (16-131)||(19265744-19265860)
chr4 (16-134)||(44526314-44526431)
chr4 (16-135)||(4739434-4739552)
chr4 (18-70)||(18741545-18741597)
chr4 (39-135)||(46396963-46397058)
chr4 (17-93)||(50264150-50264226)
chr4 (39-132)||(4972510-4972601)
chr4 (19-132)||(25233119-25233230)
chr4 (18-88)||(47359020-47359090)
chr4 (17-106)||(3689525-3689613)
chr4 (40-113)||(10672608-10672681)
chr4 (18-132)||(10754311-10754423)
chr4 (40-113)||(10886248-10886321)
chr4 (18-132)||(10968080-10968192)
chr4 (34-131)||(35251837-35251933)
chr4 (16-81)||(53346746-53346811)
chr4 (57-134)||(54921803-54921879)
chr4 (20-119)||(31370373-31370470)
chr4 (36-132)||(41711545-41711641)
chr4 (53-119)||(17121194-17121259)
chr4 (18-88)||(38663518-38663588)
chr4 (16-85)||(461941-462010)
chr4 (17-82)||(43902237-43902302)
chr4 (18-122)||(18532126-18532229)
chr4 (16-76)||(25142448-25142508)
chr4 (44-134)||(29295161-29295254)
chr4 (18-75)||(38502553-38502610)
chr4 (45-132)||(5618485-5618570)
chr4 (39-107)||(46385449-46385516)
chr4 (16-76)||(48914217-48914277)
chr4 (18-70)||(49579249-49579301)
chr4 (40-132)||(42517734-42517830)
chr4 (18-135)||(23915501-23915617)
chr4 (55-132)||(9301469-9301545)
chr4 (17-70)||(30261002-30261055)
chr4 (19-76)||(39397336-39397393)
chr4 (148-176)||(35311424-35311452)
chr4 (18-70)||(54202194-54202246)
[»] chr7 (65 HSPs)
chr7 (16-132)||(21350695-21350811)
chr7 (16-132)||(759161-759276)
chr7 (16-132)||(2459415-2459530)
chr7 (16-132)||(11373498-11373613)
chr7 (16-132)||(34947444-34947559)
chr7 (16-132)||(21390238-21390354)
chr7 (16-132)||(28202379-28202494)
chr7 (17-132)||(33819156-33819272)
chr7 (17-132)||(83328-83443)
chr7 (16-132)||(36790682-36790799)
chr7 (16-117)||(46478363-46478464)
chr7 (18-132)||(19271805-19271917)
chr7 (16-131)||(24516359-24516473)
chr7 (17-132)||(37245634-37245748)
chr7 (18-135)||(34100619-34100735)
chr7 (16-132)||(8592510-8592625)
chr7 (17-132)||(9785932-9786046)
chr7 (16-132)||(28103674-28103792)
chr7 (17-132)||(32346123-32346237)
chr7 (16-132)||(25571364-25571478)
chr7 (17-132)||(41506136-41506250)
chr7 (19-132)||(16904321-16904435)
chr7 (20-132)||(7463156-7463268)
chr7 (16-132)||(21760054-21760169)
chr7 (40-132)||(40076262-40076353)
chr7 (18-134)||(3178276-3178393)
chr7 (18-132)||(6495006-6495118)
chr7 (20-117)||(22738661-22738756)
chr7 (16-132)||(44424089-44424203)
chr7 (16-132)||(48608811-48608925)
chr7 (16-132)||(43873867-43873982)
chr7 (17-132)||(23670429-23670544)
chr7 (16-135)||(24166931-24167050)
chr7 (17-129)||(17828422-17828533)
chr7 (17-132)||(26973966-26974084)
chr7 (16-132)||(7457491-7457605)
chr7 (16-135)||(13961902-13962018)
chr7 (17-113)||(32018987-32019082)
chr7 (16-88)||(47045541-47045613)
chr7 (18-132)||(5524324-5524437)
chr7 (28-118)||(37490333-37490422)
chr7 (21-99)||(38391724-38391802)
chr7 (19-69)||(49101669-49101719)
chr7 (16-132)||(42935602-42935720)
chr7 (16-132)||(23745401-23745517)
chr7 (17-132)||(27920930-27921046)
chr7 (17-132)||(30865909-30866025)
chr7 (17-113)||(32018783-32018879)
chr7 (18-76)||(30546427-30546485)
chr7 (16-132)||(31930567-31930687)
chr7 (16-132)||(37850797-37850910)
chr7 (17-130)||(21937858-21937970)
chr7 (17-130)||(32769787-32769899)
chr7 (18-67)||(35333051-35333100)
chr7 (16-71)||(42796009-42796067)
chr7 (58-132)||(29835567-29835640)
chr7 (17-133)||(19060467-19060583)
chr7 (28-100)||(37490439-37490510)
chr7 (16-55)||(16560640-16560679)
chr7 (16-55)||(16604983-16605022)
chr7 (17-100)||(29835485-29835566)
chr7 (20-82)||(4958674-4958736)
chr7 (53-119)||(14063260-14063325)
chr7 (53-119)||(14373288-14373353)
chr7 (19-64)||(17610913-17610958)
[»] chr3 (63 HSPs)
chr3 (16-176)||(43253926-43254086)
chr3 (16-135)||(37311883-37312002)
chr3 (16-118)||(37695729-37695831)
chr3 (16-132)||(44301498-44301614)
chr3 (18-132)||(10366714-10366827)
chr3 (16-132)||(19822948-19823063)
chr3 (16-132)||(36476521-36476636)
chr3 (16-184)||(37773027-37773196)
chr3 (17-185)||(27471219-27471386)
chr3 (17-132)||(36460480-36460594)
chr3 (21-132)||(37497428-37497539)
chr3 (18-131)||(39043822-39043932)
chr3 (18-132)||(12904801-12904914)
chr3 (16-132)||(3313189-3313306)
chr3 (16-132)||(51838022-51838138)
chr3 (17-113)||(3901213-3901308)
chr3 (16-135)||(11905757-11905874)
chr3 (16-132)||(30190723-30190838)
chr3 (16-132)||(38795281-38795396)
chr3 (17-132)||(41038457-41038571)
chr3 (16-117)||(8679117-8679216)
chr3 (17-135)||(40194436-40194554)
chr3 (17-132)||(33491423-33491539)
chr3 (16-110)||(23004445-23004537)
chr3 (17-88)||(29024029-29024100)
chr3 (17-132)||(38137510-38137624)
chr3 (16-132)||(17652690-17652804)
chr3 (16-132)||(34957441-34957555)
chr3 (18-94)||(11632055-11632131)
chr3 (16-135)||(52290828-52290945)
chr3 (16-132)||(53560153-53560269)
chr3 (18-73)||(45710845-45710900)
chr3 (24-89)||(1778622-1778687)
chr3 (16-132)||(12736635-12736749)
chr3 (40-132)||(31158598-31158688)
chr3 (16-81)||(34750483-34750548)
chr3 (18-134)||(27549350-27549466)
chr3 (18-129)||(30711014-30711123)
chr3 (16-69)||(19611908-19611961)
chr3 (16-76)||(24569163-24569224)
chr3 (38-134)||(24703597-24703692)
chr3 (17-134)||(48541064-48541172)
chr3 (16-88)||(49447854-49447926)
chr3 (18-118)||(54726436-54726535)
chr3 (17-88)||(5323001-5323072)
chr3 (40-118)||(50036519-50036595)
chr3 (18-133)||(28690847-28690958)
chr3 (17-75)||(38705168-38705226)
chr3 (18-76)||(41351629-41351687)
chr3 (85-131)||(51065144-51065190)
chr3 (16-69)||(36463009-36463062)
chr3 (16-131)||(23068137-23068250)
chr3 (18-94)||(38512000-38512075)
chr3 (16-63)||(43719272-43719319)
chr3 (16-119)||(54225899-54226000)
chr3 (21-94)||(40462293-40462366)
chr3 (17-69)||(30682130-30682182)
chr3 (18-88)||(1018924-1018994)
chr3 (34-76)||(14194548-14194590)
chr3 (148-184)||(1778270-1778306)
chr3 (17-69)||(19609298-19609350)
chr3 (84-132)||(30710586-30710634)
chr3 (18-58)||(54477524-54477564)
[»] chr1 (74 HSPs)
chr1 (17-132)||(39864048-39864162)
chr1 (18-176)||(24991721-24991879)
chr1 (20-132)||(6785193-6785304)
chr1 (16-132)||(20209906-20210021)
chr1 (16-132)||(35367739-35367854)
chr1 (16-135)||(52429276-52429396)
chr1 (16-131)||(9307564-9307679)
chr1 (17-132)||(12039019-12039133)
chr1 (17-132)||(7759152-7759266)
chr1 (18-132)||(37506061-37506174)
chr1 (16-132)||(49224052-49224167)
chr1 (17-132)||(14757661-14757774)
chr1 (19-135)||(13579690-13579804)
chr1 (16-132)||(40144913-40145028)
chr1 (18-135)||(34031595-34031711)
chr1 (18-113)||(8896400-8896495)
chr1 (18-132)||(6023717-6023831)
chr1 (18-88)||(25089154-25089224)
chr1 (18-132)||(33733330-33733443)
chr1 (35-132)||(35682879-35682974)
chr1 (21-134)||(37539064-37539174)
chr1 (28-132)||(4659714-4659816)
chr1 (16-132)||(16395112-16395226)
chr1 (19-134)||(27721468-27721581)
chr1 (16-132)||(28748928-28749043)
chr1 (18-135)||(9379166-9379282)
chr1 (16-75)||(15699115-15699174)
chr1 (18-135)||(24880806-24880926)
chr1 (16-132)||(38787275-38787393)
chr1 (20-118)||(22856307-22856404)
chr1 (18-108)||(44707828-44707917)
chr1 (16-100)||(26093363-26093446)
chr1 (16-132)||(31042734-31042849)
chr1 (16-76)||(37276453-37276513)
chr1 (16-91)||(36701898-36701973)
chr1 (16-91)||(36718002-36718077)
chr1 (16-135)||(916961-917076)
chr1 (16-132)||(23169059-23169172)
chr1 (18-132)||(37177773-37177886)
chr1 (18-135)||(30755009-30755126)
chr1 (18-118)||(2572419-2572519)
chr1 (16-134)||(45331274-45331393)
chr1 (18-69)||(10495838-10495889)
chr1 (18-92)||(31154104-31154178)
chr1 (36-113)||(32826080-32826155)
chr1 (16-135)||(3260526-3260643)
chr1 (21-132)||(26256159-26256269)
chr1 (17-88)||(27896935-27897006)
chr1 (17-132)||(31978719-31978830)
chr1 (17-135)||(32219728-32219849)
chr1 (18-76)||(44761599-44761657)
chr1 (40-135)||(29074814-29074912)
chr1 (17-76)||(6160526-6160585)
chr1 (16-132)||(7351576-7351688)
chr1 (16-110)||(13366015-13366107)
chr1 (16-130)||(21910071-21910187)
chr1 (16-114)||(42409950-42410046)
chr1 (51-132)||(26252560-26252642)
chr1 (18-106)||(2137437-2137523)
chr1 (19-76)||(5179468-5179525)
chr1 (18-71)||(11449882-11449935)
chr1 (83-132)||(12151125-12151174)
chr1 (35-132)||(17988830-17988926)
chr1 (16-76)||(4441669-4441729)
chr1 (64-132)||(43500854-43500921)
chr1 (18-69)||(39887834-39887885)
chr1 (17-76)||(52837272-52837331)
chr1 (61-134)||(3312054-3312126)
chr1 (20-69)||(9412873-9412922)
chr1 (37-94)||(24500065-24500122)
chr1 (18-135)||(26258008-26258125)
chr1 (16-132)||(41121891-41122004)
chr1 (16-68)||(15904751-15904803)
chr1 (148-176)||(35367700-35367728)
[»] chr5 (49 HSPs)
chr5 (16-132)||(8698245-8698361)
chr5 (16-132)||(40530285-40530401)
chr5 (16-132)||(6315838-6315953)
chr5 (34-131)||(2232148-2232247)
chr5 (16-132)||(4818487-4818603)
chr5 (16-132)||(6615941-6616056)
chr5 (16-132)||(19929883-19929998)
chr5 (16-132)||(40899855-40899970)
chr5 (16-132)||(3348191-3348306)
chr5 (16-132)||(6753719-6753834)
chr5 (17-132)||(6753966-6754080)
chr5 (18-132)||(41496017-41496130)
chr5 (16-132)||(1248665-1248780)
chr5 (27-132)||(9515670-9515777)
chr5 (17-132)||(8725071-8725185)
chr5 (17-132)||(27542732-27542846)
chr5 (17-131)||(21060569-21060681)
chr5 (18-100)||(4440990-4441071)
chr5 (16-134)||(7827987-7828104)
chr5 (18-132)||(42803683-42803796)
chr5 (18-135)||(29570325-29570442)
chr5 (16-86)||(31655035-31655105)
chr5 (18-132)||(11796230-11796340)
chr5 (38-119)||(32439821-32439902)
chr5 (16-132)||(2588122-2588239)
chr5 (40-118)||(41478734-41478813)
chr5 (40-118)||(41480100-41480179)
chr5 (18-132)||(15818545-15818658)
chr5 (16-82)||(22848445-22848511)
chr5 (18-88)||(29374322-29374392)
chr5 (16-118)||(41062221-41062321)
chr5 (40-132)||(41492195-41492288)
chr5 (16-69)||(27580599-27580652)
chr5 (17-132)||(7330445-7330558)
chr5 (29-132)||(10598214-10598316)
chr5 (26-132)||(30512757-30512863)
chr5 (26-132)||(30553097-30553203)
chr5 (28-94)||(39325836-39325903)
chr5 (21-83)||(11904190-11904252)
chr5 (16-58)||(38161473-38161515)
chr5 (40-88)||(11761383-11761431)
chr5 (40-76)||(41478819-41478855)
chr5 (40-76)||(41492294-41492330)
chr5 (17-119)||(39213295-39213397)
chr5 (38-72)||(3076620-3076654)
chr5 (19-69)||(26285542-26285592)
chr5 (17-59)||(29856056-29856098)
chr5 (18-107)||(15439382-15439469)
chr5 (18-99)||(18841449-18841529)
[»] chr6 (44 HSPs)
chr6 (16-132)||(11656008-11656124)
chr6 (18-132)||(181494-181606)
chr6 (16-132)||(29363241-29363358)
chr6 (18-132)||(34657626-34657742)
chr6 (16-132)||(6801867-6801983)
chr6 (16-132)||(5302288-5302403)
chr6 (16-135)||(15058052-15058169)
chr6 (16-132)||(30716836-30716952)
chr6 (16-135)||(34299928-34300047)
chr6 (18-118)||(31894274-31894371)
chr6 (16-84)||(24983511-24983579)
chr6 (34-132)||(21010108-21010207)
chr6 (38-132)||(21425641-21425736)
chr6 (16-132)||(11143649-11143763)
chr6 (22-132)||(1063671-1063779)
chr6 (16-131)||(13909361-13909476)
chr6 (16-113)||(32440707-32440803)
chr6 (53-130)||(27367524-27367602)
chr6 (53-130)||(27457871-27457949)
chr6 (20-81)||(15046111-15046171)
chr6 (17-132)||(7920178-7920290)
chr6 (16-132)||(23142605-23142719)
chr6 (17-132)||(3720304-3720418)
chr6 (18-76)||(3291832-3291890)
chr6 (55-132)||(21478194-21478272)
chr6 (25-135)||(15582219-15582326)
chr6 (16-118)||(4367315-4367418)
chr6 (16-70)||(13087528-13087582)
chr6 (16-132)||(1781742-1781854)
chr6 (17-69)||(22398412-22398464)
chr6 (18-77)||(17828931-17828990)
chr6 (18-76)||(13206896-13206954)
chr6 (38-88)||(28106013-28106063)
chr6 (18-76)||(33510132-33510190)
chr6 (17-118)||(1956042-1956142)
chr6 (17-70)||(16205221-16205274)
chr6 (83-132)||(27367227-27367276)
chr6 (83-132)||(27457574-27457623)
chr6 (18-113)||(17835342-17835434)
chr6 (17-76)||(1225040-1225098)
chr6 (17-108)||(8695006-8695096)
chr6 (41-76)||(31283488-31283523)
chr6 (50-87)||(30438701-30438738)
chr6 (82-130)||(13207219-13207267)
[»] chr2 (50 HSPs)
chr2 (17-132)||(17695265-17695381)
chr2 (16-132)||(9458327-9458441)
chr2 (17-132)||(36354505-36354618)
chr2 (18-132)||(3323335-3323448)
chr2 (26-132)||(7494909-7495015)
chr2 (18-132)||(25637417-25637531)
chr2 (18-132)||(34120500-34120613)
chr2 (16-132)||(5789709-5789823)
chr2 (16-132)||(37322366-37322480)
chr2 (16-132)||(35313824-35313939)
chr2 (16-132)||(16463624-16463741)
chr2 (16-132)||(14523433-14523548)
chr2 (16-132)||(36794221-36794336)
chr2 (16-185)||(8947113-8947283)
chr2 (17-132)||(39785522-39785636)
chr2 (16-134)||(43410361-43410478)
chr2 (16-132)||(45235516-45235633)
chr2 (20-135)||(5272204-5272317)
chr2 (16-132)||(11742589-11742705)
chr2 (17-132)||(39329726-39329838)
chr2 (16-134)||(34225525-34225642)
chr2 (16-132)||(15359148-15359265)
chr2 (18-118)||(35242360-35242459)
chr2 (43-132)||(25904724-25904813)
chr2 (17-118)||(43115864-43115964)
chr2 (17-100)||(39691459-39691541)
chr2 (21-134)||(18202039-18202152)
chr2 (17-130)||(19937323-19937436)
chr2 (18-135)||(19444080-19444196)
chr2 (18-87)||(26863421-26863490)
chr2 (18-69)||(17346425-17346476)
chr2 (35-100)||(7438932-7438996)
chr2 (16-132)||(16377717-16377831)
chr2 (16-118)||(16805833-16805933)
chr2 (16-118)||(16845114-16845214)
chr2 (16-74)||(31448754-31448812)
chr2 (17-90)||(18853263-18853336)
chr2 (16-132)||(28186151-28186266)
chr2 (17-100)||(16807741-16807824)
chr2 (17-100)||(16847022-16847105)
chr2 (18-100)||(28170646-28170727)
chr2 (18-76)||(32831238-32831296)
chr2 (72-132)||(34120638-34120697)
chr2 (34-82)||(43699675-43699723)
chr2 (17-76)||(26608205-26608264)
chr2 (19-124)||(38187947-38188050)
chr2 (39-68)||(1206775-1206804)
chr2 (16-69)||(43730615-43730667)
chr2 (148-176)||(3601361-3601389)
chr2 (53-125)||(23492815-23492886)
[»] chr8 (53 HSPs)
chr8 (16-135)||(11977000-11977118)
chr8 (17-132)||(45425731-45425846)
chr8 (16-132)||(44761558-44761671)
chr8 (16-132)||(31231667-31231782)
chr8 (17-135)||(10180012-10180129)
chr8 (16-173)||(21216165-21216320)
chr8 (16-132)||(9300177-9300294)
chr8 (16-132)||(22771899-22772014)
chr8 (16-131)||(17719322-17719436)
chr8 (17-132)||(29226593-29226706)
chr8 (18-132)||(39405699-39405812)
chr8 (16-132)||(10098055-10098171)
chr8 (16-132)||(26626176-26626291)
chr8 (16-135)||(396675-396793)
chr8 (18-132)||(13335154-13335266)
chr8 (18-103)||(7172880-7172964)
chr8 (16-132)||(39482549-39482667)
chr8 (18-134)||(14855000-14855117)
chr8 (17-94)||(31270995-31271072)
chr8 (16-132)||(32476225-32476339)
chr8 (18-114)||(4924133-4924229)
chr8 (16-132)||(39301020-39301135)
chr8 (18-132)||(34948753-34948864)
chr8 (18-132)||(6796395-6796514)
chr8 (18-95)||(4428417-4428494)
chr8 (52-130)||(1875839-1875916)
chr8 (16-70)||(32678401-32678455)
chr8 (19-132)||(36006954-36007068)
chr8 (17-132)||(5053218-5053331)
chr8 (16-76)||(31082611-31082671)
chr8 (34-134)||(34394040-34394139)
chr8 (18-132)||(17823859-17823971)
chr8 (18-76)||(42886992-42887050)
chr8 (34-132)||(10953817-10953911)
chr8 (34-132)||(10961822-10961916)
chr8 (18-78)||(27294125-27294185)
chr8 (16-72)||(40996429-40996485)
chr8 (52-135)||(50750-50832)
chr8 (37-131)||(2767382-2767475)
chr8 (18-135)||(42181996-42182110)
chr8 (18-132)||(39466103-39466216)
chr8 (17-76)||(1739535-1739594)
chr8 (53-132)||(40109650-40109727)
chr8 (18-81)||(43719302-43719365)
chr8 (19-76)||(35732113-35732170)
chr8 (18-66)||(5356602-5356650)
chr8 (56-118)||(41091948-41092007)
chr8 (18-107)||(21649427-21649517)
chr8 (18-88)||(35504937-35505007)
chr8 (16-76)||(27870856-27870917)
chr8 (52-132)||(36967311-36967389)
chr8 (25-65)||(34057691-34057731)
chr8 (28-100)||(40028481-40028552)
[»] scaffold0328 (1 HSPs)
scaffold0328 (16-132)||(8044-8160)
[»] scaffold0159 (1 HSPs)
scaffold0159 (16-132)||(34082-34196)
[»] scaffold0095 (2 HSPs)
scaffold0095 (18-132)||(50141-50254)
scaffold0095 (18-132)||(22285-22398)
[»] scaffold1809 (1 HSPs)
scaffold1809 (18-132)||(749-861)
[»] scaffold0330 (1 HSPs)
scaffold0330 (16-132)||(5329-5442)
[»] scaffold0016 (1 HSPs)
scaffold0016 (34-135)||(76226-76326)
[»] scaffold0182 (1 HSPs)
scaffold0182 (16-100)||(20416-20500)
[»] scaffold0110 (1 HSPs)
scaffold0110 (19-87)||(1685-1753)
[»] scaffold0003 (1 HSPs)
scaffold0003 (18-132)||(252870-252981)
[»] scaffold0018 (1 HSPs)
scaffold0018 (16-132)||(136100-136216)
[»] scaffold0012 (1 HSPs)
scaffold0012 (16-76)||(105676-105736)
[»] scaffold0583 (1 HSPs)
scaffold0583 (16-134)||(1961-2077)
[»] scaffold0011 (1 HSPs)
scaffold0011 (18-82)||(14233-14297)
[»] scaffold0302 (1 HSPs)
scaffold0302 (17-76)||(16090-16149)
[»] scaffold0001 (1 HSPs)
scaffold0001 (38-76)||(143842-143880)
[»] scaffold0464 (1 HSPs)
scaffold0464 (17-65)||(6041-6089)
[»] scaffold0294 (1 HSPs)
scaffold0294 (16-88)||(17015-17087)
[»] scaffold0068 (1 HSPs)
scaffold0068 (21-65)||(56664-56708)


Alignment Details
Target: chr4 (Bit Score: 125; Significance: 2e-64; HSPs: 78)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 17 - 224
Target Start/End: Original strand, 47464435 - 47464643
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgta 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||  |||||||||||||||    
T  47464435 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtataatagtggaaaaaaaataataaataatgcattggtattgta 47464534  T
Q  117 aaacgacaattattttaag-nnnnnnnnnnnntgctaaagagacaataattgtgagacggaaggaatatatgttatcaacttaaaaactattttgattag 215  Q
    |||||| ||||||||||||             || |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||| |    
T  47464535 aaacgataattattttaagaaaaagaaaaaaatgttaaagagacaataattgtgagacggaaggagtatatgttatcaacttaaaacctattttcattgg 47464634  T
Q  216 ctttgtaaa 224  Q
    |||||||||    
T  47464635 ctttgtaaa 47464643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 22130095 - 22129979
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||| || |||||||| ||||||||||| ||||||||||||||    
T  22130095 ccttattaattgtagttagtggagtaattaagttggatgaaattcaataaataaaggtataataatggaaaaaaaataataaatgttgcattggtattgt 22129996  T
Q  116 aaaacgacaattatttt 132  Q
    |||| ||||||||||||    
T  22129995 aaaatgacaattatttt 22129979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 16821400 - 16821518
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||| ||||| |||||||| |||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |    
T  16821400 ccttattaattatagttagtggagtatttaagttgaatgaaattcaataaataagggtataatagtgcaaaaataataataaatgctgcattggtattct 16821499  T
Q  116 aaaacgacaattattttaa 134  Q
    |||  ||||||||||||||    
T  16821500 aaagtgacaattattttaa 16821518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 132
Target Start/End: Complemental strand, 49747009 - 49746897
Alignment:
Q  20 attaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaaa 119  Q
    ||||||| ||||| || |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||     
T  49747009 attaattatagttagttgagtagttaagttggatgaaattcaataaataagggtataataatggaaaaataataataaatgttgcattggtattgtaaag 49746910  T
Q  120 cgacaattatttt 132  Q
     ||||||||||||    
T  49746909 tgacaattatttt 49746897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 17 - 132
Target Start/End: Original strand, 35311293 - 35311409
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtgg-aaaaataataataaatgctgcattggtattgt 115  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||| || ||| ||||||||||||||||| ||||||||||||||    
T  35311293 cttattaattgtagttagtggagtaattaagttggatgaaattcaataaataaaggtataatattggaaaaaataataataaatgttgcattggtattgt 35311392  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  35311393 aaagtgacaattatttt 35311409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 47773088 - 47773203
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||  || |||||||| |||||||||||||||||||||||| |    
T  47773088 ccttattaattgtagttagtggagtagttaagttggatgaagttcaataaataagggtattataatggaaaaa-aataataaatgctgcattggtattct 47773186  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  47773187 aaagtgacaattatttt 47773203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 35380404 - 35380518
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||| || |||||||| ||||||||||| |||||||||||| |||    
T  35380404 ttattaattgtagttagtggagtggttaagttggatgaaattcaataaataagagtataataatggaaaaaaaataataaatgttgcattggtattataa 35380503  T
Q  118 aacgacaattatttt 132  Q
    |  ||||||||||||    
T  35380504 agtgacaattatttt 35380518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 49176003 - 49176119
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||| |||||| |||| |||||||| || |||||||||||| |    
T  49176003 ccttattaattgtagttagcggagtagttaagttggataaaattcaataaataagggtataatagtgggaaaaaaataataattgttgcattggtattct 49176102  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  49176103 aaagtgacaattatttt 49176119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 18 - 176
Target Start/End: Original strand, 6643731 - 6643887
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    ||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||| |||  |||||||    
T  6643731 ttattaattgtagttagtggtatagttaagttggatgaaattcaataaataagggtataatagtggaaaaata--aataaatgctgcgttgaaattgtaa 6643828  T
Q  118 aacgacaattattttaagnnnnnnnnnnnntgctaaagagacaataattgtgagacgga 176  Q
    |  |||||||||||| ||            |||||||||||||||||||||||||||||    
T  6643829 agtgacaattattttgaggaaaagaaaatatgctaaagagacaataattgtgagacgga 6643887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 51624836 - 51624723
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||| | ||||| ||||||||    
T  51624836 ttattatttgtagttagtggagtagttaagttggatgaaattcaataaataagggtatgatagtggaaaaa-aataataaatgttacattgatattgtaa 51624738  T
Q  118 aacgacaattatttt 132  Q
    |  ||||||||||||    
T  51624737 agtgacaattatttt 51624723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 33790800 - 33790917
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaa-aataataataaatgctgcattggtattg 114  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||| || || |||||||||||| |||| |||     
T  33790800 ccttattaattgtagttagtggagtagttaagttggatgaaattcaataaataagggtataataatggaaagaaaaaaaataaatgctgcgttggaattc 33790899  T
Q  115 taaaacgacaattatttt 132  Q
    ||||  ||||||||||||    
T  33790900 taaagtgacaattatttt 33790917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 38405171 - 38405287
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||| || |||||||| | ||||||||| ||||||| |||| |    
T  38405171 ccttattaattgtagttagtggtgtagttaagttggatgaaattcaataaataaaggtataataatggaaaaaaagtaataaatgttgcattgctattct 38405270  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  38405271 aaagtgacaattatttt 38405287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 44536265 - 44536383
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaa--aataataataaatgctgcattggtatt 113  Q
    ||||||||||||||||| ||||||||| |||||| |||||||||||| ||||||||||||| |||||||||  ||||| ||||||||||||||| |||||    
T  44536265 ccttattaattgtagttagtggagtagctaagttagatgaaattcaa-aaataagggtataatagtggaaaagaataa-aataaatgctgcattagtatt 44536362  T
Q  114 gtaaaacgacaattattttaa 134  Q
    |||||  ||||||||||||||    
T  44536363 gtaaagtgacaattattttaa 44536383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 135
Target Start/End: Complemental strand, 53412158 - 53412041
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    ||||||||| ||||| ||||| ||||||||||||||||||||||||||||||  ||||| ||||| ||||| ||||||| ||| | |||||||||| |||    
T  53412158 ttattaattatagtttgtggaatagttaagttggatgaaattcaataaataaaagtataatagtgaaaaaaaaataatagatgttacattggtattctaa 53412059  T
Q  118 aacgacaattattttaag 135  Q
    || |||||||||||||||    
T  53412058 aatgacaattattttaag 53412041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 11907668 - 11907783
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    |||||||||||||||||  |||||||||||||||||||||| ||||||||||||  ||||  || |||||||| |||||||||||||||||||||||| |    
T  11907668 ccttattaattgtagttattggagtagttaagttggatgaagttcaataaataaatgtattataatggaaaaa-aataataaatgctgcattggtattct 11907766  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  11907767 aaagtgacaattatttt 11907783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 17237365 - 17237437
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaa 88  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  17237365 ccttattaattgtagttagtggagtagttaagttggatgaaattcaataaataagggtataatagtggaaaaa 17237437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 176
Target Start/End: Original strand, 40122923 - 40123083
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||| ||||||||| |||||| ||||||||| || ||||||||||||||||||||| | | |||| |||| ||||||||||| ||||||||||||||    
T  40122923 ccttattgattgtagttagtggagcagttaagttcgacgaaattcaataaataagggtacaatggtgggaaaaaaataataaatgttgcattggtattgt 40123022  T
Q  116 aaaacgacaattattttaagnnnnnnnnnnnntgctaaagagacaataattgtgagacgga 176  Q
    |||  || ||||||||||||            ||||||||||||||||||| |||||||||    
T  40123023 aaagtgataattattttaagaaaaataaaaaatgctaaagagacaataattatgagacgga 40123083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 34360706 - 34360592
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgta 116  Q
    |||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||| ||||||||||| || || ||||| |  ||||||||||||    
T  34360706 cttattaattgtagttagtggagtagttaagttgaataaaattcaataaataagggtataatagtggaaaaa-aaaaaaaaatgttaaattggtattgta 34360608  T
Q  117 aaacgacaattatttt 132  Q
    ||  ||||||||||||    
T  34360607 aagtgacaattatttt 34360592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 5841496 - 5841612
Alignment:
Q  16 ccttattaattgtagttggtggagtagtt-aagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattg 114  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||| || ||| ||| |||||||||||| ||||||| ||||     
T  5841496 ccttattaattgtagttagtggagtagtttaagttggatgaaattcaataaataaaggtataataatgg-aaattaataataaatgatgcattgatattc 5841594  T
Q  115 taaaacgacaattatttt 132  Q
    ||||  ||||||||||||    
T  5841595 taaagtgacaattatttt 5841612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 49428411 - 49428502
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattg 108  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| || |||||||| | ||||||||| |||||||    
T  49428411 ccttattaattgtagttagtggagtaattaagttggatgaaattcaataaataagggtataataatggaaaaa-agtaataaatgttgcattg 49428502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 17114492 - 17114374
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| ||||||||||||| ||||| ||| |||||||||||| |||||  || |||||||| ||||||||| |||||||  ||||| |    
T  17114492 ccttattaattgtagttagtggagtagttaatttggaggaagttcaataaataaaggtattataatggaaaaa-aataataaacgctgcataagtattct 17114394  T
Q  116 aaaacgacaattattttaag 135  Q
    |||| |||||||||||||||    
T  17114393 aaaatgacaattattttaag 17114374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 135
Target Start/End: Original strand, 2942713 - 2942834
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtgg--aaaaataataataaatgctgcattggtatt 113  Q
    ||||||||||||||||| ||||||| ||||||||| ||||| ||||||||| || | |||| ||||||  ||||||||||||||||  | ||||| ||||    
T  2942713 ccttattaattgtagttagtggagtggttaagttgaatgaatttcaataaacaaagatataatagtggaaaaaaataataataaatatttcattgatatt 2942812  T
Q  114 gtaaaacgacaattattttaag 135  Q
    |||||| |||||||||||||||    
T  2942813 gtaaaatgacaattattttaag 2942834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 42616974 - 42617087
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    ||||||||||||||  ||||||||||||||| | ||||||||||||||||||| ||||| || ||| |||||||||||||||| |||||| ||||| |||    
T  42616974 ttattaattgtagtaagtggagtagttaagtcgaatgaaattcaataaataagtgtataataatgg-aaaataataataaatgttgcatttgtattctaa 42617072  T
Q  118 aacgacaattatttt 132  Q
    |  ||||||||||||    
T  42617073 agtgacaattatttt 42617087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 35998861 - 35998750
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||||||| | |||| |||| |||||| |||||||||||||  |||| ||||||||    
T  35998861 ttattaattgtagttgatggagtagttaagttggatg-aattcaataaataaagatataatagt-gaaaaagaataataaatgctatattgatattgtaa 35998764  T
Q  118 aacgacaattattt 131  Q
    |  |||||||||||    
T  35998763 attgacaattattt 35998750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 21240773 - 21240844
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaa 87  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| || |||||||    
T  21240773 ccttattaattgtagttagttgagtagttaagttggatgaaattcaataaataagggtataataatggaaaa 21240844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 32884852 - 32884781
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaa 88  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||| |||||||||||    
T  32884852 cttattaattgtagttagtggagtagttaagttggatggaattcaataaataaggatataatagtggaaaaa 32884781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 2066841 - 2066728
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||| ||||| |||| ||||||||||| ||||||||||||||||||| |||||| || || |||||||   ||||||||| |||||||||| |    
T  2066841 ccttattaattttagttagtggggtagttaagttagatgaaattcaataaataaaggtataataatgaaaaaata---ataaatgcttcattggtattct 2066745  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  2066744 aaagtgacaattatttt 2066728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 43237293 - 43237203
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtg-gaaaaataataataaatgctgcatt 107  Q
    ||||||||| ||||| ||| ||||||||||||||||||||||||||||||||| ||||| |||||  ||||||||||||||||| ||||||    
T  43237293 ttattaattatagttagtgaagtagttaagttggatgaaattcaataaataagtgtataatagtgaaaaaaataataataaatgttgcatt 43237203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 6609811 - 6609722
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcatt 107  Q
    |||||||||||| ||  ||||||||||||||||||||||| |||||||||||| ||||| || |||||||| ||||||||||| ||||||    
T  6609811 ttattaattgtaattattggagtagttaagttggatgaaactcaataaataagagtataataatggaaaaaaaataataaatgttgcatt 6609722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 132
Target Start/End: Original strand, 26147685 - 26147802
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaa-attcaataaataagggtatagtagtggaaaaata-ataataaatgctgcattggtattg 114  Q
    |||||||||||||||| |||||||| ||||||||||||||  ||||||||||||||||||| || |||||||| | | |||||||| || |||||||||     
T  26147685 cttattaattgtagttagtggagtaattaagttggatgaattttcaataaataagggtataataatggaaaaaaataaaataaatgttgtattggtattc 26147784  T
Q  115 taaaacgacaattatttt 132  Q
    ||||  ||||||||||||    
T  26147785 taaagtgacaattatttt 26147802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 132
Target Start/End: Complemental strand, 36985835 - 36985723
Alignment:
Q  19 tattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaa 118  Q
    |||||||||||||| || || || |||||||||||||||||||||||||||||||||| | ||||||||| || | |||||||| ||||| |||| ||||    
T  36985835 tattaattgtagttagtagaataattaagttggatgaaattcaataaataagggtataatggtggaaaaa-aacagtaaatgcttcattgatattctaaa 36985737  T
Q  119 acgacaattatttt 132  Q
      ||||||||||||    
T  36985736 ctgacaattatttt 36985723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 135
Target Start/End: Complemental strand, 54506838 - 54506722
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    |||| |||||||||| |||||||||||||||| ||||||||||||| ||||||  |||| || | |||||||||||||||||| ||||| | |||| |||    
T  54506838 ttatcaattgtagttagtggagtagttaagtttgatgaaattcaattaataagaatataataat-gaaaaataataataaatgttgcatcgatattataa 54506740  T
Q  118 aacgacaattattttaag 135  Q
    | ||| ||||||||||||    
T  54506739 agcgataattattttaag 54506722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 132
Target Start/End: Original strand, 28911249 - 28911340
Alignment:
Q  40 tagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaaacgacaattatttt 132  Q
    |||||||||| |||||||||||||||||||| ||||| || |||||||| ||||||||||| ||||||| |||| |||| |||||||||||||    
T  28911249 tagttaagtttgatgaaattcaataaataagagtataataatggaaaaa-aataataaatgttgcattgatattctaaatcgacaattatttt 28911340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 52859868 - 52859978
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||     |||||||| || ||| |||| ||||||||||| |||||||||||| |    
T  52859868 ccttattaattgtagttagtggagtagttaagttgaatgaaattcaat-----agggtataataatgggaaaa-aataataaatgttgcattggtattct 52859961  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  52859962 aaagtgacaattatttt 52859978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 135
Target Start/End: Original strand, 52247497 - 52247614
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||| |||||||| ||||| |  ||| |||| ||||||||||| |  |||||| ||||    
T  52247497 ccttattaattgtagttagtggagtagttaagttgaatgaaattcattaaataagtgtataatgatgg-aaaagaataataaatgttctattggt-ttgt 52247594  T
Q  116 aaaacgacaattattttaag 135  Q
    |||  |||||||||||||||    
T  52247595 aaagtgacaattattttaag 52247614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 7061735 - 7061848
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    ||||||||||||||| ||||| || |||||||| ||||||||||||||||||||||||| |||| |||||  ||||||||||| || |||| |||| |||    
T  7061735 ttattaattgtagttagtggattaattaagttgaatgaaattcaataaataagggtataatagt-gaaaataaataataaatgttgtattgatattttaa 7061833  T
Q  118 aacgacaattatttt 132  Q
    |   |||||||||||    
T  7061834 agtaacaattatttt 7061848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 17 - 134
Target Start/End: Complemental strand, 2653471 - 2653355
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgta 116  Q
    ||||||||||||||||   ||||||||||| |||||||||||| ||||||||| |||||| || ||||||||  |||||||||| ||||||| |||| ||    
T  2653471 cttattaattgtagttaaaggagtagttaaattggatgaaatttaataaataaaggtataataatggaaaaa-gataataaatgttgcattgatattcta 2653373  T
Q  117 aaacgacaattattttaa 134  Q
    ||  ||||| ||||||||    
T  2653372 aagtgacaactattttaa 2653355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 40 - 132
Target Start/End: Original strand, 28500976 - 28501069
Alignment:
Q  40 tagttaagttggatgaaattcaataaataagggtatagtagt-ggaaaaataataataaatgctgcattggtattgtaaaacgacaattatttt 132  Q
    |||||||||| |||||||||||||||||||||||||| || | ||||||| ||||||||||| || ||||||||| ||||  ||||||||||||    
T  28500976 tagttaagtttgatgaaattcaataaataagggtataataatgggaaaaaaaataataaatgttgtattggtattctaaagagacaattatttt 28501069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 11288699 - 11288751
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataa 69  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  11288699 cttattaattgtagttggtggagtagttaagttggataaaattcaataaataa 11288751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 30682265 - 30682380
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    |||||||| |||||||| || |||||||||| ||| ||||||||||||||||||  | ||| || || ||||||||||||||||||| ||||| | || |    
T  30682265 ccttattagttgtagttagtagagtagttaatttgaatgaaattcaataaataaaagcataataatgaaaaaataataataaatgctacattgattttct 30682364  T
Q  116 aaaacgacaattattt 131  Q
    |||  |||||||||||    
T  30682365 aaagtgacaattattt 30682380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 19265860 - 19265744
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtata--gtagtggaaaaataataataaatgctgcattggtatt 113  Q
    ||||||||||| ||||| ||||||||||||||||| |||||||||||||| ||||||| ||   || |||||||| |||| |||||| |||||| |||||    
T  19265860 ccttattaattatagttagtggagtagttaagttgaatgaaattcaataattaagggtgtaatataatggaaaaa-aatactaaatgttgcattagtatt 19265762  T
Q  114 gtaaaacgacaattattt 131  Q
     ||||  |||||||||||    
T  19265761 ctaaagtgacaattattt 19265744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 44526431 - 44526314
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataa----gggtatagtagtggaaaaataataataaatgctgcattggta 111  Q
    ||||||||||||||||| ||||| |||| ||||||||||||||| |||||||||    ||| ||| || ||||||||     ||| ||| ||||||||||    
T  44526431 ccttattaattgtagttagtggaatagtgaagttggatgaaatttaataaataaataagggcataataatggaaaaa-----atagatgatgcattggta 44526337  T
Q  112 ttgtaaaacgacaattattttaa 134  Q
    |||||||| ||||||||||||||    
T  44526336 ttgtaaaatgacaattattttaa 44526314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 135
Target Start/End: Original strand, 4739434 - 4739552
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatga-aattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattg 114  Q
    ||||| ||||||||||| |||||||| |||||| |||| | |||| ||| |||||||||||| ||||| ||||||||||||||||| ||||| | ||||     
T  4739434 ccttaataattgtagttagtggagtaattaagt-ggattataattaaattaataagggtatattagtg-aaaaataataataaatgttgcatcgatattc 4739531  T
Q  115 taaaacgacaattattttaag 135  Q
    | ||| |||||||||||||||    
T  4739532 tgaaaagacaattattttaag 4739552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 18741545 - 18741597
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataag 70  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  18741545 ttattaattgtagttaatggagtagttaagttggatgaaattcaataaataag 18741597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 39 - 135
Target Start/End: Original strand, 46396963 - 46397058
Alignment:
Q  39 gtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaaacgacaattattttaag 135  Q
    ||||||||||||||| ||||||| |||||||||||||| || |||||||| | ||||||||| || ||| |||| |||||  |||||||||||||||    
T  46396963 gtagttaagttggataaaattcattaaataagggtataataatggaaaaa-actaataaatgttgtattcgtatcgtaaagtgacaattattttaag 46397058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 50264150 - 50264226
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataata 93  Q
    |||||||||||||||| ||| | || |||||||| ||||||||||||||||||||||||| || |||||||| ||||    
T  50264150 cttattaattgtagttagtgaaatatttaagttgaatgaaattcaataaataagggtataataatggaaaaaaaata 50264226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 132
Target Start/End: Complemental strand, 4972601 - 4972510
Alignment:
Q  39 gtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaaacgacaattatttt 132  Q
    ||||||| ||| |||||||||||||||||||| ||||| |||||  |||| ||||||||||| | |||||||||||||||  |||| |||||||    
T  4972601 gtagttatgttagatgaaattcaataaataagtgtataatagtg--aaaaaaataataaatgttacattggtattgtaaagtgacagttatttt 4972510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 132
Target Start/End: Complemental strand, 25233230 - 25233119
Alignment:
Q  19 tattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaa 118  Q
    |||||||| ||||| ||| ||||||||||||||||||| |||||||||||| | |||  || ||  |||| ||||||||||| ||||||| |||| ||||    
T  25233230 tattaattatagttagtgaagtagttaagttggatgaagttcaataaataaagatattataatg--aaaaaaataataaatgttgcattgatattctaaa 25233133  T
Q  119 acgacaattatttt 132  Q
      ||||||||||||    
T  25233132 gtgacaattatttt 25233119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 47359020 - 47359090
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaa 88  Q
    ||||||||||||||  |||||||| |||||||| ||||||||||||||||||||||  | |||||||||||    
T  47359020 ttattaattgtagtcagtggagtaattaagttgaatgaaattcaataaataagggtgcaatagtggaaaaa 47359090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 3689613 - 3689525
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcat 106  Q
    |||||||||| ||||| || |||| |||||||| ||||||||| ||| |||||||||||| || ||| |||||||||||||||| |||||    
T  3689613 cttattaattatagttagttgagttgttaagttagatgaaattaaattaataagggtataataatgg-aaaataataataaatgttgcat 3689525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 10672681 - 10672608
Alignment:
Q  40 tagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtatt 113  Q
    ||||||||||||||||||||||||||||||| ||||| | || |||||| ||||||||||  |||||| |||||    
T  10672681 tagttaagttggatgaaattcaataaataagagtataatggttgaaaaaaaataataaatcttgcattagtatt 10672608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 10754423 - 10754311
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtag-tggaaaaataataataaatgctgcattggtattgta 116  Q
    ||||||||||||||| ||||| || |||||||| |||||||| |||||||||| ||||| | | |||||||||||||||   || |||||||||||| ||    
T  10754423 ttattaattgtagttagtggaataattaagttgaatgaaatttaataaataagagtataatggttggaaaaataataat---tgttgcattggtatttta 10754327  T
Q  117 aaacgacaattatttt 132  Q
     |  ||||||||||||    
T  10754326 gattgacaattatttt 10754311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 10886321 - 10886248
Alignment:
Q  40 tagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtatt 113  Q
    ||||||||||||||||||||||||||||||| ||||| | || |||||| ||||||||||  |||||| |||||    
T  10886321 tagttaagttggatgaaattcaataaataagagtataatggttgaaaaaaaataataaatcttgcattagtatt 10886248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 10968192 - 10968080
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtag-tggaaaaataataataaatgctgcattggtattgta 116  Q
    ||||||||||||||| ||||| || |||||||| |||||||| |||||||||| ||||| | | |||||||||||||||   || |||||||||||| ||    
T  10968192 ttattaattgtagttagtggaataattaagttgaatgaaatttaataaataagagtataatggttggaaaaataataat---tgttgcattggtatttta 10968096  T
Q  117 aaacgacaattatttt 132  Q
     |  ||||||||||||    
T  10968095 gattgacaattatttt 10968080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 131
Target Start/End: Complemental strand, 35251933 - 35251837
Alignment:
Q  34 gtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaaacgacaattattt 131  Q
    |||||||| ||||||| ||||||||||||||||||||| |||| || | |||||||||||||||||| ||  |||||||| ||||  || ||||||||    
T  35251933 gtggagtaattaagttagatgaaattcaataaataaggatataataat-gaaaaataataataaatgttgttttggtattctaaattgataattattt 35251837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 53346811 - 53346746
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagt 81  Q
    ||||||||||| ||||| |||||||||||||||| |||||||||||||||||| | ||||| ||||    
T  53346811 ccttattaattttagttagtggagtagttaagtttgatgaaattcaataaatatgagtataatagt 53346746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 57 - 134
Target Start/End: Original strand, 54921803 - 54921879
Alignment:
Q  57 attcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaaacgacaattattttaa 134  Q
    |||||||||||||||||||| |||||  |||| |||||||||||||  ||||||||||||||  ||||||||||||||    
T  54921803 attcaataaataagggtataatagtgagaaaa-aataataaatgctaaattggtattgtaaagtgacaattattttaa 54921879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 31370373 - 31370470
Alignment:
Q  20 attaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaaa 119  Q
    ||||||| ||||| |||||||||||||||||||||||| |||||||||||  ||||| || || ||||  ||||||||||| || |||| |||| |||||    
T  31370373 attaattatagttagtggagtagttaagttggatgaaaatcaataaataaatgtataataatgcaaaa--aataataaatgttgtattgttattttaaaa 31370470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 41711545 - 41711641
Alignment:
Q  36 ggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaaacgacaattatttt 132  Q
    ||||| ||||||||  |||||||||||||||||||| || | ||||||||||| |||||||||||||  |||  |||| ||| | ||||||||||||    
T  41711545 ggagttgttaagttttatgaaattcaataaataaggatacaatagtggaaaaaaaataataaatgctctatttatattctaatatgacaattatttt 41711641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 17121259 - 17121194
Alignment:
Q  53 tgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaaa 119  Q
    |||||| |||||||||| |||||  ||||| ||||||||||||||||| ||||||||||||||||||    
T  17121259 tgaaatgcaataaataatggtatgttagtg-aaaaataataataaatgttgcattggtattgtaaaa 17121194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 38663518 - 38663588
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaa 88  Q
    |||||||| |||||| ||  |||||||||||||||||||||| |||||||| ||||| | |||||||||||    
T  38663518 ttattaatcgtagttagtaaagtagttaagttggatgaaatttaataaatatgggtacaatagtggaaaaa 38663588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 462010 - 461941
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaa 85  Q
    |||||||||||||| || | ||||||||||||||| || |||||||| ||||||||||||| || |||||    
T  462010 ccttattaattgtaattagcggagtagttaagttgaataaaattcaacaaataagggtataataatggaa 461941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 43902302 - 43902237
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtg 82  Q
    |||||||||  ||||| |||||||| |||||||| ||||||||||||||||||||| ||| |||||    
T  43902302 cttattaatcatagttagtggagtaattaagttgcatgaaattcaataaataagggcataatagtg 43902237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 122
Target Start/End: Complemental strand, 18532229 - 18532126
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    ||||||||| ||||  ||||||| ||||| | |||||||||||||||||| | | |||| |||| |||||||||||||||||  | ||||| |||| |||    
T  18532229 ttattaattatagtaagtggagtggttaactaggatgaaattcaataaattatgatataatagt-gaaaaataataataaatattacattgatattctaa 18532131  T
Q  118 aacga 122  Q
    |||||    
T  18532130 aacga 18532126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 25142448 - 25142508
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtata 76  Q
    ||||||| |||| |||| |||  ||||||||||||||||||||||||||||||||| ||||    
T  25142448 ccttattgattgcagttagtgatgtagttaagttggatgaaattcaataaataaggatata 25142508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 134
Target Start/End: Complemental strand, 29295254 - 29295161
Alignment:
Q  44 taagttggatgaaattcaataaataagggtatagtagtg---gaaaaataataataaatgctgcattggtattgtaaaacgacaattattttaa 134  Q
    |||||| |||||||||||||||||||| ||||  || ||   |||||| |||||||||| ||||||||||||| ||||  || |||||||||||    
T  29295254 taagtttgatgaaattcaataaataagagtattataatggaagaaaaaaaataataaatactgcattggtattctaaagtgataattattttaa 29295161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 38502553 - 38502610
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtat 75  Q
    ||||||||| |||||  || |||||||||||||||| |||||||||||||||| ||||    
T  38502553 ttattaattatagttaatgtagtagttaagttggataaaattcaataaataagagtat 38502610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 132
Target Start/End: Complemental strand, 5618570 - 5618485
Alignment:
Q  45 aagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaaacgacaattatttt 132  Q
    |||||| ||||||||||||||| || | |||| || || ||||||||  ||||||||||||||| |||| ||||  ||||||||||||    
T  5618570 aagttgaatgaaattcaataaaaaaagttataataatgaaaaaataa--ataaatgctgcattgatattttaaagtgacaattatttt 5618485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 46385516 - 46385449
Alignment:
Q  39 gtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcatt 107  Q
    ||||||||||||  | |||||||||||||||||||||| || || |||||||| |||||||| ||||||    
T  46385516 gtagttaagttgagtaaaattcaataaataagggtatattaatgaaaaaataa-aataaatgttgcatt 46385449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 48914217 - 48914277
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtata 76  Q
    |||||||| |||||||| ||| |||| |||||||  |||||||||||||||| ||||||||    
T  48914217 ccttattatttgtagttagtgaagtaattaagtttaatgaaattcaataaattagggtata 48914277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 49579249 - 49579301
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataag 70  Q
    |||||||||||||||  || | | |||||||||||||||||||||||||||||    
T  49579249 ttattaattgtagttattgaaattgttaagttggatgaaattcaataaataag 49579301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 132
Target Start/End: Original strand, 42517734 - 42517830
Alignment:
Q  40 tagttaagttggatgaaattcaataaataagggtatagtagtggaaa----aataataataaatgctgcattggtattgtaaaacgacaattatttt 132  Q
    |||| ||||| |||||||||||||||||||  ||||| || || ||     ||||||||||||||||||||| ||||| ||||  ||||||||||||    
T  42517734 tagtaaagttagatgaaattcaataaataacagtataataatgaaagtaataataataataaatgctgcatttgtattttaaagtgacaattatttt 42517830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 135
Target Start/End: Original strand, 23915501 - 23915617
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    ||||||||| ||||| |||||||||||| || |  |||||| ||||||||||| || |  |||| |||||  ||||||||||| || |||||||||||||    
T  23915501 ttattaattatagttagtggagtagttaggt-gattgaaatacaataaataagagtgtgttagtagaaaag-aataataaatgttgtattggtattgtaa 23915598  T
Q  118 aa-cgacaattattttaag 135  Q
    ||  ||||| |||||||||    
T  23915599 aagggacaaatattttaag 23915617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 9301545 - 9301469
Alignment:
Q  55 aaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaaacgacaattatttt 132  Q
    ||||||||||||||||  |||| ||||| |||||||||||||||   | ||||| |||| ||||| ||||||||||||    
T  9301545 aaattcaataaataagattatattagtg-aaaaataataataaacaatacattgatattctaaaatgacaattatttt 9301469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 30261055 - 30261002
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataag 70  Q
    ||||||||||||| || || |||||||||||| |  ||||||||||||||||||    
T  30261055 cttattaattgtaattagtagagtagttaagtagagtgaaattcaataaataag 30261002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 39397393 - 39397336
Alignment:
Q  19 tattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtata 76  Q
    ||||||||||||||  | || |||||||  ||||||||||| ||||||||||||||||    
T  39397393 tattaattgtagttactagattagttaaaatggatgaaatttaataaataagggtata 39397336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 176
Target Start/End: Original strand, 35311424 - 35311452
Alignment:
Q  148 tgctaaagagacaataattgtgagacgga 176  Q
    |||||||||||||||||||||||||||||    
T  35311424 tgctaaagagacaataattgtgagacgga 35311452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 54202246 - 54202194
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataag 70  Q
    |||||||||||| || ||| |||| || ||| |||||||||||||||||||||    
T  54202246 ttattaattgtaattagtgaagtaattgagtgggatgaaattcaataaataag 54202194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 97; Significance: 8e-48; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 21350695 - 21350811
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  21350695 ccttattaattgtagttagtggagtagttaagttggatgaaattcaataaataagggtataatagtggaaaaaaaataataaatgctgcattggtattgt 21350794  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  21350795 aaagtgacaattatttt 21350811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 759161 - 759276
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||| |    
T  759161 ccttattaattgtagttagcggagtagttaagttggatgaaattcaataaataagggtataataatggaaaaa-aataataaatgctgcattggtattct 759259  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  759260 aaagtgacaattatttt 759276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 2459530 - 2459415
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||    
T  2459530 ccttattaattgtagttagtggagtagttaagtaggatgaaattcaataaataagggtataatagt-gaaaaaaaataataaatgctgcattggtattgt 2459432  T
Q  116 aaaacgacaattatttt 132  Q
    |||  | ||||||||||    
T  2459431 aaagtgtcaattatttt 2459415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 11373498 - 11373613
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||| |||| ||||||||||||||||||| ||||||    
T  11373498 ccttattaattgtagttagtggagtagttaagttggatgaaattcaataaataagagtataatagtgggaaaa-aataataaatgctgcattgatattgt 11373596  T
Q  116 aaaacgacaattatttt 132  Q
    |||   |||||||||||    
T  11373597 aaagtaacaattatttt 11373613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 34947559 - 34947444
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| || |||||||| ||||||||||| |||||||||||| |    
T  34947559 ccttattaattgtagttagtggagtagttaagttggatgaaattcaataaatgagggtataataatggaaaaa-aataataaatgttgcattggtattct 34947461  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  34947460 aaagtgacaattatttt 34947444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 21390354 - 21390238
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||| || |||||||| ||||||||| | |||||||||||| |    
T  21390354 ccttattgattgtagttagtggagtagttaagttagatgaaattcaataaataagggtataataatggaaaaaaaataataaacgttgcattggtattat 21390255  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  21390254 aaagtgacaattatttt 21390238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 28202379 - 28202494
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||| || |||||||| |||||||||||||| ||||||||| |    
T  28202379 ccttattaattgtagttagtggagtagtaaagttggatgaaattcaataaataagagtataataatggaaaaa-aataataaatgctgtattggtattct 28202477  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  28202478 aaagtgacaattatttt 28202494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 33819272 - 33819156
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaa-aataataataaatgctgcattggtattgt 115  Q
    |||||||||||| ||| |||||||||| |||||| |||||||||| |||||||||||||| ||||| ||| |||||||||||||||||||||||||||||    
T  33819272 cttattaattgttgtttgtggagtagtgaagttgaatgaaattcattaaataagggtataatagtgaaaataataataataaatgctgcattggtattgt 33819173  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  33819172 aaagtgacaattatttt 33819156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 83443 - 83328
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgta 116  Q
    |||||||||||||||| | |||||||||||||| |||||||||||||||||||| ||||  || |||||||| |||||||||||||||||||||||| ||    
T  83443 cttattaattgtagttagcggagtagttaagtttgatgaaattcaataaataagagtatgataatggaaaaaaaataataaatgctgcattggtattcta 83344  T
Q  117 aaacgacaattatttt 132  Q
    ||  ||||||||||||    
T  83343 aagtgacaattatttt 83328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 36790799 - 36790682
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtgg-aaaaataataataaatgctgcattggtattg 114  Q
    ||||||||||||||||| || ||||||||| || ||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||| ||||     
T  36790799 ccttattaattgtagttagttgagtagttatgtcggatgaaattcaataaataagggtataataatggaaaaaataataataaatgctgcattgctattc 36790700  T
Q  115 taaaacgacaattatttt 132  Q
    ||||  ||||||||||||    
T  36790699 taaagtgacaattatttt 36790682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 46478363 - 46478464
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    |||||||||||||||||  | |||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||| ||||| ||||||||    
T  46478363 ccttattaattgtagttaattgagtagttaagttggatgaaattcaataaataagagtataatagtggaaaaaaaataataaatgttgcatcggtattgt 46478462  T
Q  116 aa 117  Q
    ||    
T  46478463 aa 46478464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 19271805 - 19271917
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    ||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||| || |||||||  ||||||||||| ||||||||||||||||    
T  19271805 ttattaattgtagttagtggagtagttaagttggatgaaaattaataaataagggtataatattggaaaa--aataataaatgttgcattggtattgtaa 19271902  T
Q  118 aacgacaattatttt 132  Q
    |   |||||||||||    
T  19271903 agtaacaattatttt 19271917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 24516359 - 24516473
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| | || | |||||| ||||  |||||||||| ||||||| ||||||    
T  24516359 ccttattaattgtagttagtggagtagttaagttggatgaaattcaataaataaagataaaatagtgggaaaa-gataataaatgttgcattgatattgt 24516457  T
Q  116 aaaacgacaattattt 131  Q
    |||| |||||||||||    
T  24516458 aaaatgacaattattt 24516473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 37245748 - 37245634
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgta 116  Q
    ||||||||||||| |  ||||||| ||||||||||||||||||||||||||||||||||| |||| || ||| ||||||||||| |||||||||||||||    
T  37245748 cttattaattgtaataagtggagtggttaagttggatgaaattcaataaataagggtataatagt-gagaaaaaataataaatgttgcattggtattgta 37245650  T
Q  117 aaacgacaattatttt 132  Q
    ||  ||||||||||||    
T  37245649 aagtgacaattatttt 37245634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 135
Target Start/End: Original strand, 34100619 - 34100735
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    |||||||||||||||  || |||||||||||||||||| |||||||||||||||||||| |||| ||||||  |||||||||| |||||| |||||||||    
T  34100619 ttattaattgtagttactgaagtagttaagttggatgacattcaataaataagggtataatagt-gaaaaaacataataaatgttgcattagtattgtaa 34100717  T
Q  118 aacgacaattattttaag 135  Q
    |  |||||||||||||||    
T  34100718 agtgacaattattttaag 34100735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 8592510 - 8592625
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| |||||||||| ||||| ||||||||| |||||||||| ||||| |||| | |||| ||||||||||||||||||| ||||||    
T  8592510 ccttattaattgtagttagtggagtagtaaagttagatgaaatttaataaataagagtataatagtaggaaaa-aataataaatgctgcattgatattgt 8592608  T
Q  116 aaaacgacaattatttt 132  Q
    |||| || |||||||||    
T  8592609 aaaatgaaaattatttt 8592625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 9786046 - 9785932
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgta 116  Q
    |||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||| ||   |||||||||||||||||||||||||  |||| ||    
T  9786046 cttattaattgtagttagtgaagtagttaagttggataaaattcaataaataagggtataata-aagaaaaataataataaatgctgcattaatatttta 9785948  T
Q  117 aaacgacaattatttt 132  Q
    ||  ||||||||||||    
T  9785947 aagtgacaattatttt 9785932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 28103792 - 28103674
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtgga--aaaataataataaatgctgcattggtatt 113  Q
    ||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||| ||||| |||||||  |||| ||||||||||| |||| | |||||    
T  28103792 ccttattaattgtagttagtgaagtggttaagttggatgaaattcaataaataagcgtataatagtggaaaaaaaaaataataaatgttgcaattgtatt 28103693  T
Q  114 gtaaaacgacaattatttt 132  Q
    |||||  ||||||||||||    
T  28103692 gtaaagtgacaattatttt 28103674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 132
Target Start/End: Original strand, 32346123 - 32346237
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgta 116  Q
    |||||||||| || || ||||||||||||||||| ||||||||||||||||||||||||| || ||||||||  ||||||||||||||||| ||||| ||    
T  32346123 cttattaattataattagtggagtagttaagttgaatgaaattcaataaataagggtataataatggaaaaa-gataataaatgctgcattagtattcta 32346221  T
Q  117 aaacgacaattatttt 132  Q
    ||| || |||||||||    
T  32346222 aaatgataattatttt 32346237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 25571478 - 25571364
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    |||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||| || |   |||| ||||||||||| |||||||||||| |    
T  25571478 ccttattagttgtagttagtggaatagttaagttggatgaaattcaataaataagggtataataat--taaaaaaataataaatgttgcattggtattct 25571381  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  25571380 aaagtgacaattatttt 25571364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 132
Target Start/End: Original strand, 41506136 - 41506250
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgta 116  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| || | |||||| | ||||||||  ||||||| |||||||    
T  41506136 cttattaattgtagttagtggagtagttaagttggatgaaattcaataaataagagtataata-ttgaaaaaaattaataaatattgcattgatattgta 41506234  T
Q  117 aaacgacaattatttt 132  Q
    ||  || |||||||||    
T  41506235 aagtgataattatttt 41506250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 132
Target Start/End: Complemental strand, 16904435 - 16904321
Alignment:
Q  19 tattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtgga-aaaataataataaatgctgcattggtattgtaa 117  Q
    |||||||| ||||| ||| | || ||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||| || ||||| |||| |||    
T  16904435 tattaattatagttagtgaaataattaagttggatcaaattcaataaataagggtataatagtggaaaaaataataataaatactacattgatattctaa 16904336  T
Q  118 aacgacaattatttt 132  Q
    || ||||||||||||    
T  16904335 aaagacaattatttt 16904321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 132
Target Start/End: Complemental strand, 7463268 - 7463156
Alignment:
Q  20 attaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgca-ttggtattgtaaa 118  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| | || | |||| |||||||||||||||||| |||| ||| |||||||||    
T  7463268 attaattgtagttagtggagtagttaagttggatgaaattcaataaataaagatagaatagt-gaaaaataataataaatgatgcatttgttattgtaaa 7463170  T
Q  119 acgacaattatttt 132  Q
      ||| ||||||||    
T  7463169 gtgacgattatttt 7463156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 21760054 - 21760169
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||| |||||||||||  ||||||||||||||||||||||||||||||| | |||||||| ||  |||||||| |||||||||| ||||||| |||| |    
T  21760054 ccttactaattgtagttaatggagtagttaagttggatgaaattcaataattgagggtataataaaggaaaaat-ataataaatgttgcattgatattct 21760152  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  21760153 aaagtgacaattatttt 21760169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 40 - 132
Target Start/End: Complemental strand, 40076353 - 40076262
Alignment:
Q  40 tagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaaacgacaattatttt 132  Q
    |||||||||||||||||||||||||||||||||| |  || |||||||| |||||||||||||||||||||||| ||||  ||||||||||||    
T  40076353 tagttaagttggatgaaattcaataaataagggtgtgataatggaaaaa-aataataaatgctgcattggtattataaagtgacaattatttt 40076262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 18 - 134
Target Start/End: Original strand, 3178276 - 3178393
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtgg--aaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||  ||| ||||||| | ||| |||||| ||||| |    
T  3178276 ttattaattgtagttagtggagtagttaagttggatgaaattcaataaataagggtatattaatgggaaaacataataa-atatgttgcattagtattct 3178374  T
Q  116 aaaacgacaattattttaa 134  Q
    |||   |||||||||||||    
T  3178375 aaagtaacaattattttaa 3178393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 6495006 - 6495118
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    ||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||| || ||  |||| || |||||||||| ||||| |||| |||    
T  6495006 ttattaattgtagttagtggagtagtaaagttggatgaaatttaataaataagggtataataatg--aaaaaaaaaataaatgctacattgatattctaa 6495103  T
Q  118 aacgacaattatttt 132  Q
    |  ||||||||||||    
T  6495104 agtgacaattatttt 6495118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 22738756 - 22738661
Alignment:
Q  20 attaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    ||||||||||||| || || |||||||||||||||||||| ||||||||| |||||| ||||||||||  ||||||||||| | ||||||||||||||    
T  22738756 attaattgtagttagtagattagttaagttggatgaaatttaataaataaaggtataatagtggaaaa--aataataaatgttccattggtattgtaa 22738661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 44424203 - 44424089
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||| ||||||| |||||||| |||||||||||||| ||||||||||||||||||  || ||  |||| ||||||||||||||||||| |||| |    
T  44424203 ccttattaaatgtagttagtggagtaattaagttggatgaagttcaataaataagggtattataatg--aaaaaaataataaatgctgcattgatatttt 44424106  T
Q  116 aaaacgacaattatttt 132  Q
    |||  || |||||||||    
T  44424105 aaagtgataattatttt 44424089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 48608925 - 48608811
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    |||||||||| |||||| |||  |||||||||||||||||||||||||||||||| ||||| || |||||||  |||||||||| |||||||  |||| |    
T  48608925 ccttattaatcgtagttagtgatgtagttaagttggatgaaattcaataaataagagtataataatggaaaa--aataataaatactgcattaatatttt 48608828  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  48608827 aaagtgacaattatttt 48608811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 43873982 - 43873867
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||| ||||||| ||||||||||||||||||||||| || |||||||||  ||||  || ||| |||| ||||||||||||||||||| |||| |    
T  43873982 ccttattaaatgtagttagtggagtagttaagttggatgaagtttaataaataaatgtattataatgggaaaa-aataataaatgctgcattgatattct 43873884  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  43873883 aaagtgacaattatttt 43873867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 23670544 - 23670429
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgta 116  Q
    ||||||||| |||||| |||||||||||||||| ||||||||| |||||||||| ||||| ||| ||    | ||||||||||| |||||| ||||||||    
T  23670544 cttattaatggtagttagtggagtagttaagtttgatgaaatttaataaataagagtataatagcggggggaaaataataaatgatgcattagtattgta 23670445  T
Q  117 aaacgacaattatttt 132  Q
    ||  ||||||||||||    
T  23670444 aagtgacaattatttt 23670429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 24167050 - 24166931
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    |||||||||| |||||| ||| ||||||||  ||| ||||||||||| ||||||||| |||  |||| || || ||||||||||  ||||||||||||||    
T  24167050 ccttattaatagtagttagtgcagtagttacattgaatgaaattcaagaaataagggaataaaagtgaaataaaaataataaatattgcattggtattgt 24166951  T
Q  116 aaaacgacaattattttaag 135  Q
    |||  |||||||||||||||    
T  24166950 aaagtgacaattattttaag 24166931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 17828422 - 17828533
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgta 116  Q
    ||||| |||||||||| |||||||| |||||||||||||| |||||||||||| | |||| || || ||||| ||||||||||||  ||||||||||  |    
T  17828422 cttatcaattgtagttagtggagtaattaagttggatgaa-ttcaataaataatgatataataatgaaaaaaaaataataaatgcaacattggtattcga 17828520  T
Q  117 aaacgacaattat 129  Q
    ||| |||||||||    
T  17828521 aaatgacaattat 17828533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 26974084 - 26973966
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtgga--aaaataataat-aaatgctgcattggtatt 113  Q
    |||||||||||||||| ||||||||||||||||| |||||||| | |||||||  ||||| |||||||  |||| || ||| |||| |||||||| ||||    
T  26974084 cttattaattgtagttagtggagtagttaagttgaatgaaatttattaaataaatgtataatagtggaagaaaaaaaaaataaaatactgcattgatatt 26973985  T
Q  114 gtaaaacgacaattatttt 132  Q
    |||||  ||||||||||||    
T  26973984 gtaaagtgacaattatttt 26973966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 7457491 - 7457605
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||| ||||||| | ||| || |||||||  || |||||||||||||||| ||||| ||||||||||  ||||||||||| ||||||| ||||||    
T  7457491 ccttattaaatgtagttagcggaataattaagttaaattaaattcaataaataagagtataatagtggaaaa--aataataaatgttgcattgatattgt 7457588  T
Q  116 aaaacgacaattatttt 132  Q
    |||  || |||||||||    
T  7457589 aaagtgataattatttt 7457605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 13962018 - 13961902
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||| ||||||| |||||||||||||||||||||||||| ||||||||| | |||  ||   ||||   || ||||||||||||||||||||| |    
T  13962018 ccttattaagtgtagttagtggagtagttaagttggatgaaatttaataaataatgatatcctatgagaaa---aaaaataaatgctgcattggtattct 13961922  T
Q  116 aaaacgacaattattttaag 135  Q
    |||  || ||||||||||||    
T  13961921 aaagtgataattattttaag 13961902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 32018987 - 32019082
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtatt 113  Q
    |||||||||||| ||| |||||||| ||||||||||||||||| ||||||||||||  || |||||| |||| ||||||||||| || ||| |||||    
T  32018987 cttattaattgttgttagtggagtaattaagttggatgaaatttaataaataagggattaatagtgggaaaa-aataataaatgttgtattagtatt 32019082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 47045541 - 47045613
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaa 88  Q
    |||| |||||||| ||| ||| ||||||||||||||||||||||||| ||||||| ||||| |||||||||||    
T  47045541 ccttgttaattgtggttagtgtagtagttaagttggatgaaattcaacaaataagagtataatagtggaaaaa 47045613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 5524437 - 5524324
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaat---tcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattg 114  Q
    ||||||||| ||||| || ||||||||||||||||||||||   | ||||||||| |||||| ||||||||||| ||    ||||||||||||| |||||    
T  5524437 ttattaattatagttagttgagtagttaagttggatgaaatttattaataaataaaggtataatagtggaaaaagaa----aaatgctgcattgatattg 5524342  T
Q  115 taaaacgacaattatttt 132  Q
    ||||  || |||||||||    
T  5524341 taaagtgagaattatttt 5524324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 37490422 - 37490333
Alignment:
Q  28 tagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaa 118  Q
    ||||| |||||||| |||| ||| ||||||||||||||||||| | ||| ||||  ||||||||||||||||| |||||||||||| ||||    
T  37490422 tagttagtggagtaattaaattgaatgaaattcaataaataagagcatactagta-aaaaataataataaatgttgcattggtattttaaa 37490333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 38391802 - 38391724
Alignment:
Q  21 ttaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaat 99  Q
    |||||||||||| ||||| || |||||||||||||||||||||||||||  ||||| || || ||||| ||||||||||    
T  38391802 ttaattgtagttagtggaataattaagttggatgaaattcaataaataaaagtataataatgaaaaaaaaataataaat 38391724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 49101719 - 49101669
Alignment:
Q  19 tattaattgtagttggtggagtagttaagttggatgaaattcaataaataa 69  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  49101719 tattaattgtagttagtggagtagttaagttgaatgaaattcaataaataa 49101669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 42935720 - 42935602
Alignment:
Q  16 ccttattaattgtagttggtggagtag---ttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtat 112  Q
    ||||||||||||||||| |||||| ||   |||||||||||||| ||||||||||||| ||||  || | | |||| ||||||||||| |||||| ||||    
T  42935720 ccttattaattgtagttagtggaggaggagttaagttggatgaagttcaataaataagagtattataattggaaaa-aataataaatgttgcatttgtat 42935622  T
Q  113 tgtaaaacgacaattatttt 132  Q
    | ||||  ||||||||||||    
T  42935621 tctaaagtgacaattatttt 42935602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 23745401 - 23745517
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    |||||||||||||| ||  | |||||||||||| | ||  ||||||||||||||| ||||| ||||| |||||  |||||||||| ||||||  |||| |    
T  23745401 ccttattaattgtacttcttagagtagttaagtggaatataattcaataaataagtgtatattagtgaaaaaaatataataaatgttgcattaatattct 23745500  T
Q  116 aaaacgacaattatttt 132  Q
    ||||  |||||||||||    
T  23745501 aaaataacaattatttt 23745517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 27921046 - 27920930
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagt-ggaaaaataataataaatgctgcattggtattgt 115  Q
    |||||||||||||||| ||| | ||||||||||||||||| |||||| |||||| ||||  || | || |||| ||||||||||| ||||||  |||| |    
T  27921046 cttattaattgtagttagtgcattagttaagttggatgaagttcaatcaataagagtattataatggggaaaaaaataataaatgttgcattaatattct 27920947  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  27920946 aaagtgacaattatttt 27920930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 30866025 - 30865909
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtg-gaaaaataataataaatgctgcattggtattgt 115  Q
    |||||||||| || || |||||||||||||||| ||||||||||||||||||| | |||| || || ||||||  || ||||||||||||||  |||| |    
T  30866025 cttattaattataattagtggagtagttaagttagatgaaattcaataaataaagatataataatgagaaaaaagattataaatgctgcattaatattct 30865926  T
Q  116 aaaacgacaattatttt 132  Q
    |||  |||||| |||||    
T  30865925 aaagtgacaatcatttt 30865909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 32018783 - 32018879
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtatt 113  Q
    |||||||||||| ||| || ||||| ||||||||||| ||||| ||||||||||||  || |||||| |||| ||||||||||| || ||| |||||    
T  32018783 cttattaattgtcgttagtagagtaattaagttggattaaatttaataaataagggcttaatagtgggaaaaaaataataaatgttgtattagtatt 32018879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 30546427 - 30546485
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtata 76  Q
    |||||||||||||||  |||||||||||||| |  ||||||||||||||||||||||||    
T  30546427 ttattaattgtagttattggagtagttaagtggagtgaaattcaataaataagggtata 30546485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 31930567 - 31930687
Alignment:
Q  16 ccttattaattgtagttggtggagta--gttaagttggatgaaattcaataaata--agggtatagtagtggaaaaataataataaatgctgcattggta 111  Q
    ||||||||||||||||| ||||||||  |||||||| ||||||||||||||||||  || || || ||  || |||| ||||||||||| | ||||| ||    
T  31930567 ccttattaattgtagttagtggagtatagttaagtttgatgaaattcaataaataagagtgtttaataaagggaaaaaaataataaatgtttcattgata 31930666  T
Q  112 ttgtaaaacgacaattatttt 132  Q
    || ||||  ||||||||||||    
T  31930667 ttctaaagtgacaattatttt 31930687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 37850797 - 37850910
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    |||||| || |||||||  |||||| |||||||| ||||||| ||||||||||||  |||| |||||   ||||||||||||||| || |||  |||| |    
T  37850797 ccttataaactgtagttaatggagttgttaagttagatgaaaatcaataaataagaatataatagtg---aaataataataaatgatgaattaatattct 37850893  T
Q  116 aaaacgacaattatttt 132  Q
    |||| ||||||||||||    
T  37850894 aaaatgacaattatttt 37850910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 21937858 - 21937970
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgta 116  Q
    |||||||||||||||| ||||||||||||| |  | || |||| |||||| |||||| || ||||||   || |||||||||||||||||||| ||| ||    
T  21937858 cttattaattgtagttagtggagtagttaattgaggtggaatttaataaacaagggtgtattagtgggggaa-aataataaatgctgcattggcattcta 21937956  T
Q  117 aaacgacaattatt 130  Q
    ||  ||||||||||    
T  21937957 aattgacaattatt 21937970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 32769787 - 32769899
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgta 116  Q
    ||||||||||||||||| |||||||||||| |   |||||||||| | ||||| |||||  |||||| |||| ||||||||||||  ||||| |||| ||    
T  32769787 cttattaattgtagttgatggagtagttaaatgaaatgaaattcattgaataatggtatgttagtgg-aaaagaataataaatgcaacattgatatttta 32769885  T
Q  117 aaacgacaattatt 130  Q
     || ||||||||||    
T  32769886 gaatgacaattatt 32769899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 35333100 - 35333051
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaat 67  Q
    ||||||||||||||| |||||||||||||||| |||||||||||| ||||    
T  35333100 ttattaattgtagttagtggagtagttaagttagatgaaattcaacaaat 35333051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 71
Target Start/End: Complemental strand, 42796067 - 42796009
Alignment:
Q  16 ccttattaattgtagttggtggagtagtt---aagttggatgaaattcaataaataagg 71  Q
    ||||||||||||||||| |||||||||||   ||||||||||||||||| |||||||||    
T  42796067 ccttattaattgtagttagtggagtagttgttaagttggatgaaattcattaaataagg 42796009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 132
Target Start/End: Original strand, 29835567 - 29835640
Alignment:
Q  58 ttcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaaacgacaattatttt 132  Q
    |||||||||||| | |||| |||||||| || ||||||||||| ||||||||||  ||||||| |||||||||||    
T  29835567 ttcaataaataaagatataatagtggaacaa-aataataaatgttgcattggtaccgtaaaacaacaattatttt 29835640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 19060467 - 19060583
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgta 116  Q
    |||||||||||||||| ||| | | || || ||||||||||||||| |||||||| |||| || |  | ||||||||||||||  | ||||  |||| ||    
T  19060467 cttattaattgtagttagtgaatttgtcaacttggatgaaattcaacaaataaggatataataataaagaaataataataaatattacatttatattcta 19060566  T
Q  117 aaacgacaattatttta 133  Q
    ||  |||||||||||||    
T  19060567 aagtgacaattatttta 19060583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 37490510 - 37490439
Alignment:
Q  28 tagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatg 100  Q
    ||||| |||||||| |||| ||| ||||||||||||||||||| | ||| ||||  |||||||||||||||||    
T  37490510 tagttagtggagtaattaaattgaatgaaattcaataaataagagcatactagt-aaaaaataataataaatg 37490439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 16560640 - 16560679
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatga 55  Q
    ||||||||||||||||| |||| |||||||||||||||||    
T  16560640 ccttattaattgtagttagtggggtagttaagttggatga 16560679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 16605022 - 16604983
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatga 55  Q
    ||||||||||||||||| |||| |||||||||||||||||    
T  16605022 ccttattaattgtagttagtggggtagttaagttggatga 16604983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 29835485 - 29835566
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatg 100  Q
    ||||||||||| ||||   |||||||||| |||||||| |||||||||||||| | |||| |||||||| || |||||||||||    
T  29835485 cttattaattgcagttaacggagtagtta-gttggatgtaattcaataaataaagatataatagtggaacaa-aataataaatg 29835566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 4958674 - 4958736
Alignment:
Q  20 attaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtg 82  Q
    ||||||| ||||| ||| |||||||||||| |||||| |||||| |||| ||||||| |||||    
T  4958674 attaattatagttagtgaagtagttaagtttgatgaagttcaatcaataggggtataatagtg 4958736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 14063325 - 14063260
Alignment:
Q  53 tgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaaa 119  Q
    |||||| ||||||||||||||||  || ||||||| |||||||||||| || |||| ||||||||||    
T  14063325 tgaaatgcaataaataagggtatgttaatggaaaa-taataataaatgttgtattgatattgtaaaa 14063260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 14373353 - 14373288
Alignment:
Q  53 tgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaaa 119  Q
    |||||| ||||||||||||||||  || ||||||| |||||||||||| || |||| ||||||||||    
T  14373353 tgaaatgcaataaataagggtatgttaatggaaaa-taataataaatgttgtattgatattgtaaaa 14373288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 17610958 - 17610913
Alignment:
Q  19 tattaattgtagttggtggagtagttaagttggatgaaattcaata 64  Q
    ||||||||||||||  || | |||||||||||||||||||||||||    
T  17610958 tattaattgtagttattgaaatagttaagttggatgaaattcaata 17610913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 1e-40; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 16 - 176
Target Start/End: Original strand, 43253926 - 43254086
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||| ||||||||||| | ||||||||| ||||||||||||||    
T  43253926 ccttattaattgtagttagtggagtagttaagtgggatgaaattcattaaataagggtataatagtggaaaaaaactaataaatgttgcattggtattgt 43254025  T
Q  116 aaaacgacaattattttaagnnnnnnnnnnnntgctaaagagacaataattgtgagacgga 176  Q
    |||  |||||||||||| ||            |||||||||||||||||||||||||||||    
T  43254026 aaagtgacaattattttgagaaatagaaaaaatgctaaagagacaataattgtgagacgga 43254086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 37312002 - 37311883
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| ||||||||||||| ||  ||||||||||||||||||| ||||| || | |||||||||||||||||||||||||| ||||||    
T  37312002 ccttattaattgtagttagtggagtagttaaatttaatgaaattcaataaataagagtataataatagaaaaataataataaatgctgcattgatattgt 37311903  T
Q  116 aaaacgacaattattttaag 135  Q
    |||  |||||||||||||||    
T  37311902 aaagtgacaattattttaag 37311883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 118
Target Start/End: Original strand, 37695729 - 37695831
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| || |||||||| ||||||||||| |||||||||||| |    
T  37695729 ccttattaattgtagttagtggagtagttaagttagatgaaattcaataaataagggtataataatggaaaaaaaataataaatgttgcattggtattct 37695828  T
Q  116 aaa 118  Q
    |||    
T  37695829 aaa 37695831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 44301614 - 44301498
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    |||||| ||||||| || ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||| ||||||| |||| |    
T  44301614 ccttatcaattgtaattagtggagtagttaagttggatgaaattcaataaataagagtataatagtggaaaaatattaataaatgttgcattgatattat 44301515  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  44301514 aaagtgacaattatttt 44301498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 10366714 - 10366827
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| || ||| |||| ||||||||||| |||||||||||| |||    
T  10366714 ttattaattgtagttagtgaagtagttaagttggatgaaattcaataaataagggtataataatgggaaaa-aataataaatgttgcattggtattctaa 10366812  T
Q  118 aacgacaattatttt 132  Q
    |  ||||||||||||    
T  10366813 agtgacaattatttt 10366827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 19823063 - 19822948
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| || ||  |||| |||||||||||||||||||||||| |    
T  19823063 ccttattaattgtagttagtggaatagttaagttggatgaaattcaataaataagggtatattaatg--aaaaaaataataaatgctgcattggtattct 19822966  T
Q  116 aaaa-cgacaattatttt 132  Q
    ||||  ||||||||||||    
T  19822965 aaaagtgacaattatttt 19822948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 36476636 - 36476521
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||| || | |||||| | |||||||||||||||||||||| |    
T  36476636 ccttattaattgtagttagtagagtagttaagtttgatgaaattcaataaataagggtataataatagaaaaa-agtaataaatgctgcattggtattct 36476538  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  36476537 aaagtgacaattatttt 36476521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 37773027 - 37773196
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaata-ataataaatgctgcattggtattg 114  Q
    ||||||||||| ||||  ||||| ||||||||||| |||||||||| |||||||||||||| || |||||||| | | ||||||||||||||||||||||    
T  37773027 ccttattaattatagtcagtggaatagttaagttgaatgaaattcattaaataagggtataataatggaaaaaaataaaataaatgctgcattggtattg 37773126  T
Q  115 taaaacgacaattattttaagnnnnnnnnnnnntgctaaagagacaataattgtgagacggaaggaatat 184  Q
    ||||  |||||||||||| ||            ||||||||||||||| ||||||||||||| |||||||    
T  37773127 taaagtgacaattattttgagaaaaagaaaaattgctaaagagacaattattgtgagacggatggaatat 37773196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 185
Target Start/End: Complemental strand, 27471386 - 27471219
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgta 116  Q
    |||||||||| ||  | ||||||||||||||||| |||||||||||||||||| ||||| |||||||| ||| |||||||||||||| ||||||||| ||    
T  27471386 cttattaattataagtagtggagtagttaagttgaatgaaattcaataaataaaggtatggtagtggacaaa-aataataaatgctgtattggtattata 27471288  T
Q  117 aaacgacaattattttaagnnnnnnnnnnnntgctaaagagacaataattgtgagacggaaggaatata 185  Q
    ||  |||||||||||| ||            ||||||||||||||||||||||||||||| ||| ||||    
T  27471287 aagtgacaattattttgagaaaaagaaaaaatgctaaagagacaataattgtgagacggagggattata 27471219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 132
Target Start/End: Original strand, 36460480 - 36460594
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgta 116  Q
    ||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||  ||||||| ||| |||    
T  36460480 cttattaattgtagttaatggagtaattaagttggatgaaattcaataaataagggtataatagtggaaaca-aataataaatattgcattgatatcgta 36460578  T
Q  117 aaacgacaattatttt 132  Q
    ||  ||||||||||||    
T  36460579 aagtgacaattatttt 36460594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 21 - 132
Target Start/End: Complemental strand, 37497539 - 37497428
Alignment:
Q  21 ttaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaaac 120  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||  ||||| || || ||||||||||||||||| || ||||||||| ||||      
T  37497539 ttaactgtagttagtggagtagttaagttggatgaaattcaataaataaacgtataataatgaaaaaataataataaatgttgtattggtattataaagt 37497440  T
Q  121 gacaattatttt 132  Q
    ||||||||||||    
T  37497439 gacaattatttt 37497428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 39043822 - 39043932
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| || ||   ||| ||||||||||| |||||||||||| |||    
T  39043822 ttattaattgtagttagtggagtagttaagttgaatgaaattcaataaataagggtataataatg---aaaaaataataaatgttgcattggtattctaa 39043918  T
Q  118 aacgacaattattt 131  Q
    |  |||||||||||    
T  39043919 agtgacaattattt 39043932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 12904914 - 12904801
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||| || |||||| ||| |||| ||||| |||    
T  12904914 ttattaattgtagttagtggagtaattaagttggatgaaattcaataaataagggtataatagtggaaaaa-aaaaataaaagctccattagtattataa 12904816  T
Q  118 aacgacaattatttt 132  Q
    |   |||||||||||    
T  12904815 attaacaattatttt 12904801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 3313306 - 3313189
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaa-aataataataaatgctgcattggtattg 114  Q
    |||||||||||||||||  ||||||| ||||||||||||||||||||||||||||  |||| || || ||| |||||||||||||||||||||  |||||    
T  3313306 ccttattaattgtagttaatggagtatttaagttggatgaaattcaataaataagattataataatgaaaataataataataaatgctgcatttatattg 3313207  T
Q  115 taaaacgacaattatttt 132  Q
    ||||  ||||||||||||    
T  3313206 taaagtgacaattatttt 3313189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 51838022 - 51838138
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    |||||||| |||||| | |||||||||||| |||| |||||||||| |||||||||||||| ||||||||||| ||||||||||| ||||||   |||||    
T  51838022 ccttattagttgtagctagtggagtagttacgttgaatgaaattcattaaataagggtataatagtggaaaaaaaataataaatgttgcattataattgt 51838121  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  51838122 aaagtgacaattatttt 51838138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 3901213 - 3901308
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtatt 113  Q
    ||||||| |||||||| |||| ||| |||||||||||||||||||||||||||||||||| || |||||||| ||||||||||| | ||||||||||    
T  3901213 cttattagttgtagttagtggggtacttaagttggatgaaattcaataaataagggtataataatggaaaaa-aataataaatgttacattggtatt 3901308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 11905874 - 11905757
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    |||||||||||||||||  |||||| |||||||||||||||||||||||||||| | |||| || |||||||  ||||||||||| ||||||| |||| |    
T  11905874 ccttattaattgtagttaatggagttgttaagttggatgaaattcaataaataaagatataataatggaaaa--aataataaatgttgcattgatattct 11905777  T
Q  116 aaaacgacaattattttaag 135  Q
    ||||  | ||||||||||||    
T  11905776 aaaataaaaattattttaag 11905757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 30190723 - 30190838
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| | || ||| ||| |||||||||||| | ||||  |||| |    
T  30190723 ccttattaattgtagttagtggagtagttaagttggatgaaattcaattaataagggtaaaataatgg-aaattaataataaatgttacatttttattct 30190821  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  30190822 aaagtgacaattatttt 30190838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 38795396 - 38795281
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||| ||| |||||| ||||||| |  ||||  |||||||||||| |    
T  38795396 ccttattaattgtagttggtggagttgttaagttggatgaaatttaataaaaaagggcataatagtgg-aaaataaaataaaatattgcattggtattct 38795298  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  38795297 aaagtgacaattatttt 38795281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 17 - 132
Target Start/End: Original strand, 41038457 - 41038571
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgta 116  Q
    ||||||||||||||||  || |||||||||||||| |||| |||||||||||||| |||  || |||||||| |||||||||||||||||| ||||| ||    
T  41038457 cttattaattgtagttaatgaagtagttaagttggttgaagttcaataaataaggatattataatggaaaaa-aataataaatgctgcatttgtatttta 41038555  T
Q  117 aaacgacaattatttt 132  Q
    ||  ||||||||||||    
T  41038556 aagtgacaattatttt 41038571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 8679117 - 8679216
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||| ||||| ||| | || |||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||| |||||| || ||||    
T  8679117 ccttattaattatagttagtgaattaattaagttggatgaaattcaataaataagggtataatagtggaaaa--aataataaatgatgcatttgttttgt 8679214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 40194554 - 40194436
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgta 116  Q
    |||||||||||||||| |||| |||||| ||||||| |||||| ||||||||| | |||| ||||||||||| |||||| ||| || ||||| |||| ||    
T  40194554 cttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataaagatataatagtggaaaaaaaataatgaatactacattgatattcta 40194455  T
Q  117 aaacgacaattattttaag 135  Q
    ||  |||||||||||||||    
T  40194454 aattgacaattattttaag 40194436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 132
Target Start/End: Original strand, 33491423 - 33491539
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattc-aataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    |||||||||| ||||| ||||||||||||||||| ||||||||  |||||||||||||||| |||||  |||| ||| |||||| || |||| |||||||    
T  33491423 cttattaattatagttagtggagtagttaagttgtatgaaattttaataaataagggtataatagtgcgaaaaaaatcataaatactacattagtattgt 33491522  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  33491523 aaagtgacaattatttt 33491539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 23004445 - 23004537
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggt 110  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||  ||||  |||| || || |||||||||||||||    
T  23004445 ccttattaattgtagttagtggagtagttaagttgtatgaaattcaataaataagggtgtaaaagtg--aaaaaaaaaaaaaatgctgcattggt 23004537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 29024029 - 29024100
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaa 88  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||| || ||||||||    
T  29024029 cttattaattgtagttagtggagtaattaagttggatgaaattcaataaataatggtataataatggaaaaa 29024100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 132
Target Start/End: Original strand, 38137510 - 38137624
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgta 116  Q
    |||||||| ||||||| |||| |||||||| || ||||||||||||||||||| | |||| |||||| |||||||||||||||  |||||| |||||| |    
T  38137510 cttattaactgtagttagtggggtagttaaattcgatgaaattcaataaataaagatataatagtgg-aaaataataataaatattgcattagtattgca 38137608  T
Q  117 aaacgacaattatttt 132  Q
    ||  ||||||||||||    
T  38137609 aagtgacaattatttt 38137624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 17652804 - 17652690
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| |||  ||||||||||||||||||||| |||||||||||||||| || | |||||  ||| |||||| |||||||  |||| |    
T  17652804 ccttattaattgtagttagtgaggtagttaagttggatgaaatttaataaataagggtataataattgaaaa--aattataaatactgcattaatattct 17652707  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  17652706 aaagtgacaattatttt 17652690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 34957555 - 34957441
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||| ||||| ||||||||||| ||||  |||||||||||||||||||| |||||||  ||||||  ||||||||||| | |||||||||| |    
T  34957555 ccttattaattatagttagtggagtagttcagttaaatgaaattcaataaataaggatatagtaacggaaaa--aataataaatgttacattggtatttt 34957458  T
Q  116 aaaacgacaattatttt 132  Q
    |||  || |||||||||    
T  34957457 aaagtgataattatttt 34957441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 11632131 - 11632055
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataa 94  Q
    ||||||||||||||| |||||  |||||||||||||||||||||||||||||  ||||| ||||| |||||||||||    
T  11632131 ttattaattgtagttagtggaaaagttaagttggatgaaattcaataaataaaagtataatagtgaaaaaataataa 11632055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 52290945 - 52290828
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||| ||||| ||||||||||||||||| || || |||||||||||||| |||  || || ||||  |||||||||||||||||||||||| |    
T  52290945 ccttattaattatagttagtggagtagttaagttgaataaagttcaataaataaggatattataatgtaaaa--aataataaatgctgcattggtattct 52290848  T
Q  116 aaaacgacaattattttaag 135  Q
    |||   |||||||| |||||    
T  52290847 aaagtcacaattatcttaag 52290828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 53560269 - 53560153
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||| | ||||| || |||||||||||||| ||||| |||||||||||||||| |  || |||||||| |  ||||||||||||||| ||||| |    
T  53560269 ccttattaaatatagttagtagagtagttaagttgaatgaagttcaataaataagggtgttataatggaaaaaaataaataaatgctgcattagtattct 53560170  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  53560169 aaagtgacaattatttt 53560153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 45710900 - 45710845
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggt 73  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  45710900 ttattaattgtagttagtggagtagttaagttggatgaagttcaataaataagggt 45710845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 1778687 - 1778622
Alignment:
Q  24 attgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaat 89  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||| || || ||||||    
T  1778687 attgtagttagtggagtagataagttggatgaaattcaataaataagggtataataatgaaaaaat 1778622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 12736635 - 12736749
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    |||||||||||||| || ||| ||||||||| |||||| |||||||||||||||||||||| |||||  |||| |||||||||| ||  ||||  ||| |    
T  12736635 ccttattaattgtacttagtgtagtagttaatttggataaaattcaataaataagggtataatagtg--aaaacaataataaatactagattgacattct 12736732  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  12736733 aaagtgacaattatttt 12736749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 132
Target Start/End: Original strand, 31158598 - 31158688
Alignment:
Q  40 tagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaaacgacaattatttt 132  Q
    |||||||||| ||||||||||||||||||| |||||| |||||  |||| |||||||||| ||||||| ||||||||||  || |||||||||    
T  31158598 tagttaagttagatgaaattcaataaataatggtataatagtg--aaaaaaataataaatactgcatttgtattgtaaagtgagaattatttt 31158688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 34750548 - 34750483
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagt 81  Q
    ||||||||||||||||||||||||||||||| |||||||||| | ||||||||| |||||| ||||    
T  34750548 ccttattaattgtagttggtggagtagttaacttggatgaaaattaataaataatggtataatagt 34750483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 134
Target Start/End: Original strand, 27549350 - 27549466
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    |||||| || ||||| |||| |||||||| ||  || ||||||||||||||| | |||| |||||| |||| ||||||||||| ||||||| ||||||||    
T  27549350 ttattagttatagttagtggcgtagttaaattaaattaaattcaataaataaagttataatagtgggaaaaaaataataaatgttgcattgatattgtaa 27549449  T
Q  118 aacgacaattattttaa 134  Q
    |  |||| |||||||||    
T  27549450 agtgacagttattttaa 27549466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 30711123 - 30711014
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    |||||||||||||||  ||||| | ||||||| ||||||||||||||||||||  |||| |||||  |||| ||||||||||| || |||| |||| |||    
T  30711123 ttattaattgtagttaatggagcaattaagttagatgaaattcaataaataagattataatagtg--aaaaaaataataaatgttgtattgatattctaa 30711026  T
Q  118 aacgacaattat 129  Q
    || |||||||||    
T  30711025 aatgacaattat 30711014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 19611961 - 19611908
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataa 69  Q
    ||||||||||||| ||| |||||||||||||||| |||||||||||||||||||    
T  19611961 ccttattaattgttgttagtggagtagttaagtttgatgaaattcaataaataa 19611908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 24569163 - 24569224
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaat-aagggtata 76  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||| ||||| |||||||||    
T  24569163 ccttattaattgtagttagtggagtagttaagttgaatgaaattcattaaatgaagggtata 24569224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 134
Target Start/End: Complemental strand, 24703692 - 24703597
Alignment:
Q  38 agtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaaacgacaattattttaa 134  Q
    |||||||||||||||||||||||||||||||| | |||| ||||||||| | ||||| ||||  | |||||| | | ||||| ||||||||||||||    
T  24703692 agtagttaagttggatgaaattcaataaataaagatataatagtggaaaga-aataacaaatattacattggcactttaaaatgacaattattttaa 24703597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 134
Target Start/End: Original strand, 48541064 - 48541172
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgta 116  Q
    ||||||||||||| || || |||||||||||||| |||||||||||  |||||||||||        ||||||||||||||||| |||| || |||| ||    
T  48541064 cttattaattgtaattagttgagtagttaagttgaatgaaattcaa-caataagggtat--------aaaaataataataaatgttgcactgatattata 48541154  T
Q  117 aaacgacaattattttaa 134  Q
    ||| ||||||||||||||    
T  48541155 aaatgacaattattttaa 48541172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 49447854 - 49447926
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaa 88  Q
    ||||||||||||||||| || || ||||||| || ||||||||| |||||||||||||||| |||| ||||||    
T  49447854 ccttattaattgtagttagtagaatagttaaatttgatgaaatttaataaataagggtataatagtagaaaaa 49447926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 54726535 - 54726436
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    |||||||||||||||  ||||||||||||||| |||||| || |||||||||||||||  || ||| |||| | ||||||||| |||||| ||||| |||    
T  54726535 ttattaattgtagttaatggagtagttaagttagatgaagtttaataaataagggtattataatgggaaaa-actaataaatgttgcattagtattctaa 54726437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 5323001 - 5323072
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaa 88  Q
    |||||||||| || || ||  |||||||||||| |||||||||||||||||||||||||| || ||||||||    
T  5323001 cttattaattataattagtaaagtagttaagtttgatgaaattcaataaataagggtataataatggaaaaa 5323072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 118
Target Start/End: Original strand, 50036519 - 50036595
Alignment:
Q  40 tagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaa 118  Q
    |||||||||| ||||||||||||||||||| |||||| ||| ||||||  ||||||||||||| ||||  |||||||||    
T  50036519 tagttaagtttgatgaaattcaataaataaaggtataatagcggaaaa--aataataaatgctacattaatattgtaaa 50036595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 28690847 - 28690958
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    ||||||||||||||| |||   ||||||||||||||||||||||||||||||  ||||| |    || ||| || || ||||| ||||||| ||||||||    
T  28690847 ttattaattgtagttagtgagatagttaagttggatgaaattcaataaataaatgtataat----gataaaaaaaaaaaaatgttgcattgatattgtaa 28690942  T
Q  118 aacgacaattatttta 133  Q
    || |||| ||||||||    
T  28690943 aatgacagttatttta 28690958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 38705226 - 38705168
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtat 75  Q
    |||||||||||||||| || ||||| ||||||| |||||||||||||||||||| ||||    
T  38705226 cttattaattgtagttagttgagtaattaagttagatgaaattcaataaataagagtat 38705168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 41351629 - 41351687
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtata 76  Q
    ||||||||  ||||| ||||||||||||||||| |||||||||||||||||| ||||||    
T  41351629 ttattaatgatagttagtggagtagttaagttgaatgaaattcaataaataaaggtata 41351687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 131
Target Start/End: Original strand, 51065144 - 51065190
Alignment:
Q  85 aaaataataataaatgctgcattggtattgtaaaacgacaattattt 131  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||    
T  51065144 aaaaaaataataaatgctgcattggtattgtaaaatgacaattattt 51065190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 36463009 - 36463062
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataa 69  Q
    ||||||||||||| ||| |||||||| ||||||||||||||||| |||||||||    
T  36463009 ccttattaattgttgtttgtggagtaattaagttggatgaaattaaataaataa 36463062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 23068250 - 23068137
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| ||| | || ||||||| |||||||||||||||||||  ||||| || ||  | || ||||||||||| || |||| ||||||    
T  23068250 ccttattaattgtagtttgtgaaatatttaagttagatgaaattcaataaataaaagtataataatg--acaaaaataataaatgttgtattgatattgt 23068153  T
Q  116 aaaacgacaattattt 131  Q
    |||   ||||||||||    
T  23068152 aaagtaacaattattt 23068137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 38512075 - 38512000
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataa 94  Q
    ||||| |||||| ||  ||||||||||||||| |||| |||| || |||||||||||||||||| ||||||||||||    
T  38512075 ttattgattgtaattattggagtagttaagtttgatggaatttaaaaaataagggtatagtagt-gaaaaataataa 38512000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 43719319 - 43719272
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaat 63  Q
    ||||||||||||||||| ||||||||||||| ||||||| ||||||||    
T  43719319 ccttattaattgtagttagtggagtagttaaattggatggaattcaat 43719272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 54225899 - 54226000
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||| ||||| ||||||| |||| | ||  |||||| ||||||||||||||||  || |||||||  ||||||||||| || |||||||||||    
T  54225899 ccttattaattatagttagtggagtggtta-gatgattgaaatgcaataaataagggtatgttaatggaaaag-aataataaatgttgtattggtattgt 54225996  T
Q  116 aaaa 119  Q
    ||||    
T  54225997 aaaa 54226000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 40462366 - 40462293
Alignment:
Q  21 ttaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataa 94  Q
    |||||||||||| |  ||||||||||||||||| ||||||||||||||   ||||| |||||| |||| |||||    
T  40462366 ttaattgtagttagaagagtagttaagttggataaaattcaataaatagttgtataatagtgggaaaaaaataa 40462293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 30682130 - 30682182
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataa 69  Q
    ||||||||||||||||  |||| || |||||||||| ||||||||||||||||    
T  30682130 cttattaattgtagttaatggaataattaagttggacgaaattcaataaataa 30682182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 1018924 - 1018994
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaa 88  Q
    |||||||||| |||| |||||||||||| ||||  ||| || ||||||||||  ||||| |||||||||||    
T  1018924 ttattaattgcagttagtggagtagttaggttgcttgagatacaataaataaaagtatattagtggaaaaa 1018994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 76
Target Start/End: Complemental strand, 14194590 - 14194548
Alignment:
Q  34 gtggagtagttaagttggatgaaattcaataaataagggtata 76  Q
    |||||||| ||||||||||||||||||||| ||||| ||||||    
T  14194590 gtggagtaattaagttggatgaaattcaattaataaaggtata 14194548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 1778306 - 1778270
Alignment:
Q  148 tgctaaagagacaataattgtgagacggaaggaatat 184  Q
    |||||||||||||||||| |||||||||| |||||||    
T  1778306 tgctaaagagacaataatcgtgagacggatggaatat 1778270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 19609350 - 19609298
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataa 69  Q
    ||||||| |||| ||| ||||||||| |||||| ||| |||||||||||||||    
T  19609350 cttattacttgttgttagtggagtagataagtttgataaaattcaataaataa 19609298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 30710634 - 30710586
Alignment:
Q  84 aaaaataataataaatgctgcattggtattgtaaaacgacaattatttt 132  Q
    ||||||||||||||||| ||||||| |||| ||||  ||||||||||||    
T  30710634 aaaaataataataaatgttgcattgatattctaaagtgacaattatttt 30710586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 54477524 - 54477564
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaat 58  Q
    |||||||||||||||  |||||||||||||||| |||||||    
T  54477524 ttattaattgtagttaatggagtagttaagttgaatgaaat 54477564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 5e-40; HSPs: 74)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 39864162 - 39864048
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgta 116  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||| |||||||    
T  39864162 cttattaattgtagttagtggagtagttaagttggatgaaattcaataaataagggtataatagtggaaaaa-aataataaatgttgcattgatattgta 39864064  T
Q  117 aaacgacaattatttt 132  Q
    ||  ||||||||||||    
T  39864063 aagtgacaattatttt 39864048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 18 - 176
Target Start/End: Original strand, 24991721 - 24991879
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||||| |||||| |||| ||||||||||| |||||| |||||||||    
T  24991721 ttattaattgtagttagtggaatagttaagttggatgaaattcaataaataaaggtataatagtgggaaaaaaataataaatgttgcattagtattgtaa 24991820  T
Q  118 aacgacaattattttaagnnnnnnnnnnnntgctaaagagacaataattgtgagacgga 176  Q
    |  |||||||||||| ||            |||||||||||||||||||||||||||||    
T  24991821 agtgacaattattttgagaaggaaaaaaaatgctaaagagacaataattgtgagacgga 24991879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 20 - 132
Target Start/End: Complemental strand, 6785304 - 6785193
Alignment:
Q  20 attaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaaa 119  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||| |||||||||||     
T  6785304 attaattgtagttagtggagtagttaagtttgatgaaattcaataaataagggtataatagtggaaaaa-aataataaatgttgcataggtattgtaaag 6785206  T
Q  120 cgacaattatttt 132  Q
     ||||||||||||    
T  6785205 tgacaattatttt 6785193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 20209906 - 20210021
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||  || ||| |||| |||||||||||||||||||||||| |    
T  20209906 ccttattaattgtagttagtggagtagttaagttggatgaagttcaataaataagggtattataatgggaaaa-aataataaatgctgcattggtattct 20210004  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  20210005 aaagtgacaattatttt 20210021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 35367854 - 35367739
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||| |||||| | ||||||||| | ||||||||||||    
T  35367854 ccttattaattgtagttagtggagtagttaagttagatgaaattcaataaataagggtataatagt-gaaaaagactaataaatgtttcattggtattgt 35367756  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  35367755 aaagtgacaattatttt 35367739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 52429396 - 52429276
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtg-gaaaaataataataaatgctgcattggtattg 114  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||| || || |||||| ||||||||||| ||||||| |||||    
T  52429396 ccttattaattgtagttagtggagtagttaagttgaatgaaattcattaaataagggtataataatgagaaaaaaaataataaatgttgcattgatattg 52429297  T
Q  115 taaaacgacaattattttaag 135  Q
    ||||  |||||||||||||||    
T  52429296 taaagtgacaattattttaag 52429276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 9307679 - 9307564
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||| |||| |||||||||| || ||||| ||| ||    
T  9307679 ccttgttaattgtagttagtggagtagttaagttggatgaaattcaataaataaaggtataatagtgggaaaaaaataataaatactacattgatatcgt 9307580  T
Q  116 aaaacgacaattattt 131  Q
    |||| |||||||||||    
T  9307579 aaaatgacaattattt 9307564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 12039133 - 12039019
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgta 116  Q
    ||||||||||||||||  ||||||| |||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||| |||||| ||||||||    
T  12039133 cttattaattgtagttaatggagtatttaagttggatgtaattcaataaataagggtataatagtgg-aaaataataataaatgttgcattagtattgta 12039035  T
Q  117 aaacgacaattatttt 132  Q
    ||  ||||||||||||    
T  12039034 aagtgacaattatttt 12039019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 7759266 - 7759152
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgta 116  Q
    |||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||| || |||||||| ||||||||||| ||||||  |||||||    
T  7759266 cttattaattgtagttagtggaatagttaagttgaatgaaattcaataaataagggtataataatggaaaaa-aataataaatgatgcattattattgta 7759168  T
Q  117 aaacgacaattatttt 132  Q
    ||  ||||||||||||    
T  7759167 aagtgacaattatttt 7759152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 37506174 - 37506061
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||  || |||||||| ||||||||||| ||||||| |||| |||    
T  37506174 ttattaattgtagttagtggagtagttaagttgaatgaaattcaataaataagggtattataatggaaaaa-aataataaatgttgcattgatattctaa 37506076  T
Q  118 aacgacaattatttt 132  Q
    |  ||||||||||||    
T  37506075 agtgacaattatttt 37506061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 49224052 - 49224167
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||  || | |||||| ||||||||||| |||||| ||||| |    
T  49224052 ccttattaattgtagttagtggagtagttaagttggatgaagttcaataaataagggtattataat-gaaaaaaaataataaatgttgcattagtattct 49224150  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  49224151 aaagtgacaattatttt 49224167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 132
Target Start/End: Original strand, 14757661 - 14757774
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgta 116  Q
    |||||||||||||||| ||| |||||||||||| ||||||||| |||||||||||||||| ||||||||||| ||| |||||| ||||||| |||||||     
T  14757661 cttattaattgtagttagtgaagtagttaagttcgatgaaatttaataaataagggtataatagtggaaaaa-aattataaattctgcatttgtattgt- 14757758  T
Q  117 aaacgacaattatttt 132  Q
    ||| ||||||||||||    
T  14757759 aaaggacaattatttt 14757774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 13579690 - 13579804
Alignment:
Q  19 tattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaa 118  Q
    |||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||| || |  ||||||||||||||||  ||||| |||||| ||||    
T  13579690 tattaattgtagttagtggagtatttaagtttgatgaaattcaataaataagggtataataat--aaaaataataataaatattgcatcggtattttaaa 13579787  T
Q  119 acgacaattattttaag 135  Q
      |||||||||||||||    
T  13579788 gtgacaattattttaag 13579804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 40144913 - 40145028
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    |||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||  || ||| |||| ||||||||||| ||||||| |||| |    
T  40144913 ccttattaattgtagttaatggagtagttaagttggatgaagttcaataaataagggtattataatgggaaaa-aataataaatgttgcattgatattct 40145011  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  40145012 aaagtgacaattatttt 40145028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 135
Target Start/End: Original strand, 34031595 - 34031711
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    ||||||||||||||| ||| | |||| | |||| ||||||||||||||||||| ||||| || ||||||||  |||||||||||||||||| || | |||    
T  34031595 ttattaattgtagttagtgtaatagtaaggttgaatgaaattcaataaataagagtataataatggaaaaa-cataataaatgctgcattgatagtctaa 34031693  T
Q  118 aacgacaattattttaag 135  Q
    ||||||||||||||||||    
T  34031694 aacgacaattattttaag 34031711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 8896400 - 8896495
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtatt 113  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||| |  ||| |||| ||||||||||| ||||||| ||||    
T  8896400 ttattaattgtagttagtggagtggttaagttggatgaaattcaataaataaaggtataatcatgggaaaaaaataataaatgttgcattgatatt 8896495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 6023717 - 6023831
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    |||||||||||||||  |||||||||||||||||||||||||||||| || || ||||| ||||||||||| |  ||||||| || ||||| ||||||||    
T  6023717 ttattaattgtagttattggagtagttaagttggatgaaattcaatacatgagagtataatagtggaaaaaaataaataaatactacattgatattgtaa 6023816  T
Q  118 aacgacaattatttt 132  Q
     | || |||||||||    
T  6023817 gatgataattatttt 6023831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 25089154 - 25089224
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaa 88  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  25089154 ttattaattgtagttagtgaagtagttaagttggatgaaattcaataaataagggtatactaatggaaaaa 25089224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 33733330 - 33733443
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    ||||||||||||||| || |||| |||| || | ||||||||||||||||||||||||| || ||| |||| ||||||||||||| |||||||||| |||    
T  33733330 ttattaattgtagttagtagagtggttaggtagaatgaaattcaataaataagggtataataatgg-aaaagaataataaatgcttcattggtattctaa 33733428  T
Q  118 aacgacaattatttt 132  Q
    |  ||||||||||||    
T  33733429 agtgacaattatttt 33733443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 132
Target Start/End: Original strand, 35682879 - 35682974
Alignment:
Q  35 tggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaaacgacaattatttt 132  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||  ||||||| |||| ||||  | ||||||||||    
T  35682879 tggagtagttaagttggatgaaattcaataaataagggtataatagtggaaaa--aataataaatattgcattgatattctaaattggcaattatttt 35682974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 134
Target Start/End: Complemental strand, 37539174 - 37539064
Alignment:
Q  21 ttaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaaac 120  Q
    |||||||||||| || ||||||||||||| |||||||||||||||||||||||||  ||||||||||| ||| ||||||  | |||||||||| |||||     
T  37539174 ttaattgtagttagtagagtagttaagtttgatgaaattcaataaataagggtatcatagtggaaaaa-aattataaat--tacattggtattctaaaat 37539078  T
Q  121 gacaattattttaa 134  Q
     |||||||||||||    
T  37539077 aacaattattttaa 37539064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 132
Target Start/End: Complemental strand, 4659816 - 4659714
Alignment:
Q  28 tagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaaacgacaatt 127  Q
    ||||| |||||||| |||||||| |||||||||||||||||||| |||| ||||||||||  |||||  |||| |||||||||||||||||  |||||||    
T  4659816 tagttagtggagtaattaagttgaatgaaattcaataaataaggatataatagtggaaaa--aataaataatgttgcattggtattgtaaagtgacaatt 4659719  T
Q  128 atttt 132  Q
    |||||    
T  4659718 atttt 4659714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 16395112 - 16395226
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    |||| |||||||||||| |||||||||||||||| ||||||||||||||||||| | |||| || ||  |||| |||||||||| || |||||||||| |    
T  16395112 cctttttaattgtagttagtggagtagttaagttagatgaaattcaataaataatgatataataatg--aaaaaaataataaatcctacattggtattct 16395209  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  16395210 aaagtgacaattatttt 16395226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 134
Target Start/End: Complemental strand, 27721581 - 27721468
Alignment:
Q  19 tattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaa 118  Q
    |||||||||||||| || || ||||||| |||||| |||||||||||||||  ||||| ||||||||||  ||||||||||| |||||| ||||||||||    
T  27721581 tattaattgtagttagtagaatagttaaattggataaaattcaataaataaaagtataatagtggaaaa--aataataaatgatgcatttgtattgtaaa 27721484  T
Q  119 acgacaattattttaa 134  Q
      | ||||||||||||    
T  27721483 gtggcaattattttaa 27721468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 28749043 - 28748928
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    |||||||||||||| || || || | ||||||||||||||||||  ||||||||||||||| |||||| |||| ||||||||||||||||||| |||| |    
T  28749043 ccttattaattgtaattagtagaattgttaagttggatgaaattttataaataagggtataatagtgggaaaa-aataataaatgctgcattgctattat 28748945  T
Q  116 aaaacgacaattatttt 132  Q
    |||  || |||||||||    
T  28748944 aaagtgataattatttt 28748928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 135
Target Start/End: Complemental strand, 9379282 - 9379166
Alignment:
Q  18 ttattaattgtagttggtgg-agtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgta 116  Q
    ||||||||||||||| |||| |||||||||||| ||||||||| ||||||||  |||||| || ||||||||||  |||||||  ||||||| |||| ||    
T  9379282 ttattaattgtagttagtgggagtagttaagtttgatgaaatttaataaatataggtataataatggaaaaata--aataaatattgcattgatattcta 9379185  T
Q  117 aaacgacaattattttaag 135  Q
    ||| |||||||||||||||    
T  9379184 aaatgacaattattttaag 9379166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 15699174 - 15699115
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtat 75  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  15699174 ccttattaattgtagttagtggagtagttaagttggatgaagttcaataaataagggtat 15699115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 135
Target Start/End: Complemental strand, 24880926 - 24880806
Alignment:
Q  18 ttattaattgtagttggtggagtagtta---agttggatgaaattcaataaataagggtatagtagtggaaaaa-taataataaatgctgcattggtatt 113  Q
    ||||||||||||||| ||||||||||||   |||||||||||||||||||||| ||| |||| || ||||||||  ||||||||||||| || |||||||    
T  24880926 ttattaattgtagttagtggagtagttagtaagttggatgaaattcaataaattaggatataataatggaaaaagaaataataaatgctaca-tggtatt 24880828  T
Q  114 gtaaaacgacaattattttaag 135  Q
     ||||  |||||||||||||||    
T  24880827 ctaaagtgacaattattttaag 24880806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 38787393 - 38787275
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtgg--aaaaataataataaatgctgcattggtatt 113  Q
    ||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||| || |||  ||||| || |||||||  ||||||| | ||    
T  38787393 ccttattaattatagttagtggagtagttaaattggatgaaattcaataaataagggtataataatgggaaaaaaaaaaaataaattttgcattgctttt 38787294  T
Q  114 gtaaaacgacaattatttt 132  Q
     ||||  ||||||||||||    
T  38787293 ctaaagtgacaattatttt 38787275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 118
Target Start/End: Original strand, 22856307 - 22856404
Alignment:
Q  20 attaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaa 118  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||  ||||| ||||| ||||| ||||||||||| || |||| |||| ||||    
T  22856307 attaattgtagttagtggagtagttaagctggatgaaattcaataaataaaagtataatagtgcaaaaa-aataataaatgttgaattgatattttaaa 22856404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 108
Target Start/End: Original strand, 44707828 - 44707917
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattg 108  Q
    ||||||||||||||| ||| || ||||||||||||||||||||||||||||| |||||| ||||||||| | ||||||||||  |||||||    
T  44707828 ttattaattgtagttagtgaagcagttaagttggatgaaattcaataaataaaggtataatagtggaaaca-aataataaatattgcattg 44707917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 26093446 - 26093363
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatg 100  Q
    ||||||||||||||||| ||| |||| ||||||| |||||| ||||||||||||||||||| || ||||||||| ||||||||||    
T  26093446 ccttattaattgtagttagtgaagtaattaagttagatgaagttcaataaataagggtataataatggaaaaat-ataataaatg 26093363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 31042849 - 31042734
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||| | ||| |||| |||||||| |||||||||||||||||| | |||  ||||||||||| ||||||||||| || |||| |||| |    
T  31042849 ccttattaattgtaggtagtgaagtaattaagttgaatgaaattcaataaataaagatatcatagtggaaaaa-aataataaatgatgtattgatattct 31042751  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  31042750 aaagtgacaattatttt 31042734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 37276513 - 37276453
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtata 76  Q
    ||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||    
T  37276513 ccttattaattgtagttagtggaatagttaaattggatgaaattcaataaataagggtata 37276453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 36701973 - 36701898
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataa 91  Q
    ||||||||||||||||| ||||| | |||||||| |||||||||||||||||||| ||||| || |||||||||||    
T  36701973 ccttattaattgtagttagtggaatcgttaagtttgatgaaattcaataaataagagtataataatggaaaaataa 36701898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 36718077 - 36718002
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataa 91  Q
    ||||||||||||||||| ||||| | |||||||| |||||||||||||||||||| ||||| || |||||||||||    
T  36718077 ccttattaattgtagttagtggaatcgttaagtttgatgaaattcaataaataagagtataataatggaaaaataa 36718002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 917076 - 916961
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| || || ||||||||||| |||||||| |||||||||||||| | || ||||||||    |||||||||||||||| |||| |    
T  917076 ccttattaattgtagttagtagattagttaagttgcatgaaatttaataaataagggtaaaataatggaaaaa----aataaatgctgcattgatattct 916981  T
Q  116 aaaacgacaattattttaag 135  Q
    |||   |||||||| |||||    
T  916980 aaagtaacaattatattaag 916961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 23169059 - 23169172
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||| ||||| ||  | |||||||||  | |||||||||||||||||| ||||| |||||||||   | ||||||||| ||||||||||||||    
T  23169059 ccttattaattatagttagttaaatagttaagtgaggtgaaattcaataaataagagtataatagtggaaa---agtaataaatgttgcattggtattgt 23169155  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  23169156 aaagtgacaattatttt 23169172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 37177886 - 37177773
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    |||||||| |||||| ||  |||||||||||||||| ||||| |||||||||| ||||| |||| ||||||||||||||| || | |||||  ||| |||    
T  37177886 ttattaatggtagttagtatagtagttaagttggataaaattaaataaataagagtataatagt-gaaaaataataataagtgttacattgacattctaa 37177788  T
Q  118 aacgacaattatttt 132  Q
    || ||||||||||||    
T  37177787 aatgacaattatttt 37177773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 135
Target Start/End: Original strand, 30755009 - 30755126
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    ||||||||| ||||| ||| | |||||||||| ||||||||||||||||||| |||||| || || || || || |||| ||| |||||||||||| |||    
T  30755009 ttattaattatagttagtgaaatagttaagttagatgaaattcaataaataaaggtataataatgaaagaaaaaaaatacatgatgcattggtattctaa 30755108  T
Q  118 aacgacaattattttaag 135  Q
    |  || ||||||||||||    
T  30755109 agtgataattattttaag 30755126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 2572519 - 2572419
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||||   |||| || |||||||| |  |||||||  ||||||| |||| |||    
T  2572519 ttattaattgtagttagtggagtagttaagttgaatgaaattcaataaataaaaatataataatggaaaaaaataaataaatattgcattgatattttaa 2572420  T
Q  118 a 118  Q
    |    
T  2572419 a 2572419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 45331393 - 45331274
Alignment:
Q  16 ccttattaattgtagttggtggag---tagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtat 112  Q
    |||||||||||||||||  |||||   ||||||||||||||||| |||||||||| ||||||   || |||||||  ||||||||||| |||||||||||    
T  45331393 ccttattaattgtagttaatggaggaatagttaagttggatgaagttcaataaattagggtaatataatggaaaa--aataataaatgttgcattggtat 45331296  T
Q  113 tgtaaaacgacaattattttaa 134  Q
    | ||||   |||||||||||||    
T  45331295 tttaaagtaacaattattttaa 45331274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 10495889 - 10495838
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataa 69  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  10495889 ttattaattgtaattagtggagtagttaagttggatgaaattcaataaataa 10495838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 31154178 - 31154104
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataat 92  Q
    |||||||||||||||||| ||||  ||||||| ||||||||||| |||||||| |||||||| || |||||||||    
T  31154178 ttattaattgtagttggtagagtgcttaagtttgatgaaattcagtaaataagtgtatagtattgaaaaaataat 31154104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 32826080 - 32826155
Alignment:
Q  36 ggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtatt 113  Q
    ||||||||||||||||||||| ||||||||||||||||||  || |||||||  ||||||||||| || |||||||||    
T  32826080 ggagtagttaagttggatgaagttcaataaataagggtattataatggaaaa--aataataaatgttgtattggtatt 32826155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 3260643 - 3260526
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| |||||| ||||||||| ||||||||| ||||||||||  |||| |||| ||| |  ||||||||||  || ||| ||||| |    
T  3260643 ccttattaattgtagttagtggagaagttaagtttgatgaaattgaataaataagtttataatagtagaaca--aataataaatattgtattagtattct 3260546  T
Q  116 aaaacgacaattattttaag 135  Q
    |||  || ||||||||||||    
T  3260545 aaagtgataattattttaag 3260526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 132
Target Start/End: Original strand, 26256159 - 26256269
Alignment:
Q  21 ttaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaaac 120  Q
    ||||||||||||  | ||||||||||||||||||||| |||||||| |||  |||| ||||||||| | | ||||||||| | |||||||||| ||||      
T  26256159 ttaattgtagttaatagagtagttaagttggatgaaagtcaataaagaagaatataatagtggaaaga-attaataaatgatacattggtattataaagt 26256257  T
Q  121 gacaattatttt 132  Q
    | ||||||||||    
T  26256258 ggcaattatttt 26256269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 27897006 - 27896935
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaa 88  Q
    |||||||||| ||||| |||||||| || |||||||||||||| ||||||||| |||||| |||| ||||||    
T  27897006 cttattaattatagttagtggagtaatttagttggatgaaatttaataaataaaggtataatagtcgaaaaa 27896935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 132
Target Start/End: Original strand, 31978719 - 31978830
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgta 116  Q
    |||||||||| |||||  |||||||||||||||| || ||||||| |||||||||||||| || ||| ||||    || |||| || |||||||||||||    
T  31978719 cttattaattatagttaatggagtagttaagttgaattaaattcattaaataagggtataataatgggaaaa----aaaaaatactacattggtattgta 31978814  T
Q  117 aaacgacaattatttt 132  Q
    ||   |||||||||||    
T  31978815 aagtaacaattatttt 31978830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 32219728 - 32219849
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaa-taagggtatagtagtggaaaaataataat--aaatgctgcattggtatt 113  Q
    |||||||||| ||||| ||||||| ||||||||||||||||||||||||| |||  ||||| | ||| |||| ||||||   ||||  ||||||||||||    
T  32219728 cttattaattatagtttgtggagtggttaagttggatgaaattcaataaaataaatgtataattgtgaaaaagtaataaataaaatattgcattggtatt 32219827  T
Q  114 gtaaaacgacaattattttaag 135  Q
     ||||  ||||| |||||||||    
T  32219828 ttaaagagacaaatattttaag 32219849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 44761599 - 44761657
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtata 76  Q
    ||||||||| ||||| ||||| | ||||||||| |||||||||||||||||||||||||    
T  44761599 ttattaattatagttagtggaatggttaagttgaatgaaattcaataaataagggtata 44761657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 135
Target Start/End: Complemental strand, 29074912 - 29074814
Alignment:
Q  40 tagttaagttggatgaaattcaat-----aaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaaacgacaattattttaa 134  Q
    ||||||||||||||||||||||||     ||||||| ||||| |||||||||||||  |||||||| || ||| ||||| ||||  ||||||||||||||    
T  29074912 tagttaagttggatgaaattcaataaattaaataagagtatattagtggaaaaata--aataaatgttgtatttgtattataaagtgacaattattttaa 29074815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 6160526 - 6160585
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtata 76  Q
    ||||||||||||||||  |||| ||||||||||| ||| ||||||||||| |||||||||    
T  6160526 cttattaattgtagttaatggaatagttaagttgaatgtaattcaataaacaagggtata 6160585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 7351688 - 7351576
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||| ||||| ||||| || ||||||||||  |||||||||||||||| ||||| || || |||||| ||    || | |||||| ||||| |    
T  7351688 ccttattaattctagttagtggaataattaagttggacaaaattcaataaataagagtataataatgaaaaaatgat----aaagttgcattagtattct 7351593  T
Q  116 aaaacgacaattatttt 132  Q
    |||| ||||||||||||    
T  7351592 aaaatgacaattatttt 7351576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 13366015 - 13366107
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggt 110  Q
    |||||||||| |||||| ||||||||| || ||  | | | || ||||| ||||||||||| ||||||||||  |||||||||||||||||||||    
T  13366015 ccttattaatagtagttagtggagtagctaggtgagttcagatacaatagataagggtatattagtggaaaa--aataataaatgctgcattggt 13366107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 21910071 - 21910187
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtg---gaaaaataataataaatgctgcattggtat 112  Q
    ||||||||| | ||||| | |||||||||||||| |||| |||||||||||||| |||||| || ||    |||||||||||||||||  |||||| |||    
T  21910071 ccttattaactatagtttgaggagtagttaagtttgatggaattcaataaataa-ggtataataatgagaaaaaaataataataaatgtggcattgatat 21910169  T
Q  113 tgtaaaacgacaattatt 130  Q
    | ||||  ||||||||||    
T  21910170 tttaaagtgacaattatt 21910187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 42410046 - 42409950
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattg 114  Q
    ||||||||||||||||| || |  ||||||||| ||||||| |||||||||||| | |||  || ||  |||| ||||||||||||||||||| |||||    
T  42410046 ccttattaattgtagttagttggatagttaagtaggatgaagttcaataaataaagatattataatg--aaaaaaataataaatgctgcattgatattg 42409950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 51 - 132
Target Start/End: Original strand, 26252560 - 26252642
Alignment:
Q  51 gatgaaattcaataaataagggtatagtagtggaaaaata-ataataaatgctgcattggtattgtaaaacgacaattatttt 132  Q
    |||||||||||||||||||||||||| || || ||||| | | |||||||| ||| |||  ||||||||| ||||||||||||    
T  26252560 gatgaaattcaataaataagggtatattaatgaaaaaaaataaaataaatgttgctttgaaattgtaaaatgacaattatttt 26252642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 2137437 - 2137523
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcat 106  Q
    ||||||||||| |||  ||||||| ||||||||||| ||||||||||||||| | |||| || ||  |||| ||||||||||| |||||    
T  2137437 ttattaattgttgttattggagtatttaagttggataaaattcaataaataaagatataataatg--aaaaaaataataaatgttgcat 2137523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 5179468 - 5179525
Alignment:
Q  19 tattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtata 76  Q
    |||||||||||||| ||||||||| ||| ||||||||||||||  ||||||| |||||    
T  5179468 tattaattgtagttagtggagtagataaattggatgaaattcaggaaataagagtata 5179525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 11449935 - 11449882
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagg 71  Q
    |||||||||||||||  | ||||||| || ||||||||||||||||||||||||    
T  11449935 ttattaattgtagttaatagagtagtaaaattggatgaaattcaataaataagg 11449882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 12151174 - 12151125
Alignment:
Q  83 gaaaaataataataaatgctgcattggtattgtaaaacgacaattatttt 132  Q
    |||||||||||||||||||||||||| |||| ||||  ||||||||||||    
T  12151174 gaaaaataataataaatgctgcattgatattataaagtgacaattatttt 12151125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 132
Target Start/End: Original strand, 17988830 - 17988926
Alignment:
Q  35 tggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaaacgacaattatttt 132  Q
    |||||||||||| ||||||| ||   |||||||| | ||||| ||||||||| | ||||||||||| ||||||  |||| ||||| ||||||||||||    
T  17988830 tggagtagttaatttggatgtaacaaaataaatatgagtataatagtggaaaga-aataataaatgttgcattaatattttaaaatgacaattatttt 17988926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 4441669 - 4441729
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtata 76  Q
    |||| |||||||||||| |||||||| |||| || ||||||||| ||||||||| ||||||    
T  4441669 ccttgttaattgtagttagtggagtaattaaattagatgaaatttaataaataaaggtata 4441729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 132
Target Start/End: Original strand, 43500854 - 43500921
Alignment:
Q  64 aaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaaacgacaattatttt 132  Q
    |||||||||| || || ||||||| ||||||||||||||||||| ||||| ||||  ||||||||||||    
T  43500854 aaataagggtgtaataatggaaaa-taataataaatgctgcattagtattctaaagtgacaattatttt 43500921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 39887885 - 39887834
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataa 69  Q
    |||||||| |||||| || ||||| ||||||| |||||||||||||||||||    
T  39887885 ttattaatagtagttagttgagtaattaagtttgatgaaattcaataaataa 39887834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 52837331 - 52837272
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtata 76  Q
    |||||||||||||| | |||||||||||||  || |||||||||||||| ||| ||||||    
T  52837331 cttattaattgtagctagtggagtagttaatatgaatgaaattcaataattaaaggtata 52837272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 134
Target Start/End: Complemental strand, 3312126 - 3312054
Alignment:
Q  61 aataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaaacgacaattattttaa 134  Q
    |||||||||| ||||| |||||||| | |||||||||||| || |||| |||| ||||  ||||||||||||||    
T  3312126 aataaataagagtataatagtggaata-taataataaatgttgtattgatattataaagtgacaattattttaa 3312054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 9412873 - 9412922
Alignment:
Q  20 attaattgtagttggtggagtagttaagttggatgaaattcaataaataa 69  Q
    |||||||||||||  |||| |||||  |||||||||||||||||||||||    
T  9412873 attaattgtagttaatggaatagttgggttggatgaaattcaataaataa 9412922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 24500065 - 24500122
Alignment:
Q  37 gagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataa 94  Q
    ||||||||||||| |||||||||||| |||||| ||| || ||||| ||||| |||||    
T  24500065 gagtagttaagttagatgaaattcaacaaataatggtgtaatagtgaaaaaacaataa 24500122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 135
Target Start/End: Original strand, 26258008 - 26258125
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    |||||||| || ||| || || || |||||||||||||||  || |||||||||||||| |||  |||||| || || ||||  || |||| |||| |||    
T  26258008 ttattaatcgtggttagtagaataattaagttggatgaaaaccagtaaataagggtataatagaagaaaaaaaaaaacaaatattgtattgatattctaa 26258107  T
Q  118 aacgacaattattttaag 135  Q
    |  |||||||||||||||    
T  26258108 agtgacaattattttaag 26258125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 41121891 - 41122004
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaat---aagggtatagtagtggaaaaataataataaatgctgcattggtat 112  Q
    ||||||||||||||||| |||||||||||      ||||||||| |||||||   ||||||||| || || ||||| ||||||||||| || |||| |||    
T  41121891 ccttattaattgtagttagtggagtagttt-----gatgaaatttaataaattataagggtataataatgaaaaaa-aataataaatgttgtattgatat 41121984  T
Q  113 tgtaaaacgacaattatttt 132  Q
    | ||||  ||||||||||||    
T  41121985 tttaaagtgacaattatttt 41122004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 15904803 - 15904751
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaata 68  Q
    ||||||||||||||||| ||| |||||||||||    ||||||||||||||||    
T  15904803 ccttattaattgtagttagtgaagtagttaagtgaagtgaaattcaataaata 15904751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 176
Target Start/End: Complemental strand, 35367728 - 35367700
Alignment:
Q  148 tgctaaagagacaataattgtgagacgga 176  Q
    |||||||||||||||||||||||||||||    
T  35367728 tgctaaagagacaataattgtgagacgga 35367700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 3e-38; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 8698361 - 8698245
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| || ||||| ||||||    
T  8698361 ccttattaattgtagttagtggagtggttaagttggatgaaattcaataaataagggtataatagtggaaaaaaaataataaatactacattgatattgt 8698262  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  8698261 aaagtgacaattatttt 8698245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 40530285 - 40530401
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||| |||||| |||  ||||||||||||||||||||||||||    
T  40530285 ccttattaattgtagttagtggagtggttaagttggatgaaattaaataaataagggtataatagtgggaaataaataataaatgctgcattggtattgt 40530384  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  40530385 aaagtgacaattatttt 40530401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 6315838 - 6315953
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||| |||||||||||| |    
T  6315838 ccttattaattgtagttagtgaagtagttaagttggatgaaattcaataaataagggtataataatgg-aaaataataataaatgttgcattggtattct 6315936  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  6315937 aaagtgacaattatttt 6315953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 34 - 131
Target Start/End: Original strand, 2232148 - 2232247
Alignment:
Q  34 gtggagtagttaagttggatgaaattcaataaataagggtatagtagtgg--aaaaataataataaatgctgcattggtattgtaaaacgacaattattt 131  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |  ||||||||||||||||||| |||||||||||||||| |||||||||||    
T  2232148 gtggagtagttaagttggatgaaattcaataaataagggtataatagtagaaaaaaataataataaatgctacattggtattgtaaaatgacaattattt 2232247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 4818603 - 4818487
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| |||||||  ||||||| |||||||||||||||||||||||||| |||||| |||| ||||||||||||| |||||||||| |    
T  4818603 ccttattaattgtagttagtggagtgattaagttagatgaaattcaataaataagggtataatagtgggaaaaaaataataaatgctacattggtattat 4818504  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  4818503 aaagtgacaattatttt 4818487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 6615941 - 6616056
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||| ||||| ||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||| ||||| ||||||||    
T  6615941 ccttattaattttagttagtggagtggttaagttggatgaa-ttcaataaataagggtataatagtggaaaaaaaataataaatgttgcataggtattgt 6616039  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  6616040 aaagtgacaattatttt 6616056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 19929998 - 19929883
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||| |||||||||||| |    
T  19929998 ccttattaattgtagttagtgaaatagttaagttggatgaaattcaataaataagggtataataatgg-aaaataataataaatgttgcattggtattct 19929900  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  19929899 aaagtgacaattatttt 19929883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 40899970 - 40899855
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| || ||| ||||||||||||||||||||| || |||| |    
T  40899970 ccttattaattgtagttagtggagtagttaagttagatgaaattcaataaataagggtataataatgg-aaaataataataaatgctgcaatgttattct 40899872  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  40899871 aaagtgacaattatttt 40899855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 3348191 - 3348306
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||| ||||||||||| |||| |||||||||||||| |||||||||||||| |||  || |||||||| |||||||||||||||||||||||| |    
T  3348191 ccttattaaatgtagttggtgaagtaattaagttggatgaagttcaataaataaggatattataatggaaaaa-aataataaatgctgcattggtattct 3348289  T
Q  116 aaaacgacaattatttt 132  Q
    |||| ||||||||||||    
T  3348290 aaaatgacaattatttt 3348306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 6753719 - 6753834
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| || ||||||||  |||||||||| |||||||||||| |    
T  6753719 ccttattaattgtagttagtggagtagttaagttggatgaaatttaataaataagggtataataatggaaaaa-gataataaatgttgcattggtattct 6753817  T
Q  116 aaaacgacaattatttt 132  Q
    |||  || |||||||||    
T  6753818 aaagtgataattatttt 6753834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 6754080 - 6753966
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgta 116  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |  |||||||| || || ||||| |||||||||||| ||    
T  6754080 cttattaattgtagttagtggagtagttaagttggatgaaattcaataaataagggtatattgatggaaaaa-aaaaaaaaatgttgcattggtattata 6753982  T
Q  117 aaacgacaattatttt 132  Q
    ||  ||||||||||||    
T  6753981 aagtgacaattatttt 6753966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 41496130 - 41496017
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    ||||||||||||||| ||||||||||||| ||||||||||| |||||||||| |||||| |||||| |||| ||||||||||| |||||| |||||||||    
T  41496130 ttattaattgtagttagtggagtagttaaattggatgaaatgcaataaataaaggtataatagtgg-aaaagaataataaatgttgcattagtattgtaa 41496032  T
Q  118 aacgacaattatttt 132  Q
    |  ||||||||||||    
T  41496031 agtgacaattatttt 41496017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 1248665 - 1248780
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| ||| ||||||||||||| || ||||||||| |||||||||||| || | |||||||||||||||||| ||||||| |||| |    
T  1248665 ccttattaattgtagttagtgaagtagttaagttgaataaaattcaattaataagggtataataat-gaaaaataataataaatgttgcattgatattct 1248763  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  1248764 aaagtgacaattatttt 1248780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 9515777 - 9515670
Alignment:
Q  27 gtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaa--aataataataaatgctgcattggtattgtaaaacgaca 124  Q
    |||||| ||||||||||||||||| |||||||||| |||||||| ||||| |||||||||  |||||||||||||| |||||| ||||||||||  ||||    
T  9515777 gtagttagtggagtagttaagttgaatgaaattcattaaataagagtataatagtggaaaataataataataaatgatgcattagtattgtaaagtgaca 9515678  T
Q  125 attatttt 132  Q
    ||||||||    
T  9515677 attatttt 9515670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 132
Target Start/End: Original strand, 8725071 - 8725185
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgta 116  Q
    |||||||||||||||| ||||||||||||| ||| ||||||||||||||||||  ||||| || | |||||||||||| || |||||||||| |||| ||    
T  8725071 cttattaattgtagttagtggagtagttaacttgaatgaaattcaataaataatagtataataat-gaaaaataataaaaactgctgcattgttattcta 8725169  T
Q  117 aaacgacaattatttt 132  Q
    ||| ||||||||||||    
T  8725170 aaatgacaattatttt 8725185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 27542846 - 27542732
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgta 116  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||| || |||||||| | ||||| |||||||||| ||||| ||    
T  27542846 cttattaattgtagttagtggagtagttaagttggataaaattcaataaataagagtataataatggaaaaa-agtaatacatgctgcattagtattcta 27542748  T
Q  117 aaacgacaattatttt 132  Q
    ||   |||||||||||    
T  27542747 aagtcacaattatttt 27542732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 17 - 131
Target Start/End: Complemental strand, 21060681 - 21060569
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgta 116  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||| || ||| ||||||| |||||||| ||||||| |||| ||    
T  21060681 cttattaattgtagttagtggagtagttaagttggataaaattcaataaataatggtataataatgg-aaaataa-aataaatgatgcattgatattcta 21060584  T
Q  117 aaacgacaattattt 131  Q
    ||  |||||||||||    
T  21060583 aagtgacaattattt 21060569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 4441071 - 4440990
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatg 100  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||| |||| |||||| |||||||||||    
T  4441071 ttattaattgtagttagtggagtagttaaattggatgaaattcaataaataacggtataatagtagaaaaa-aataataaatg 4440990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 7827987 - 7828104
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||| || | ||||||  |||||||||  ||||||| |||| |    
T  7827987 ccttattaattgtagttagtggagtagttaagttggatgaaatttaataaataaggatataataat-gaaaaaagataataaatattgcattgatatttt 7828085  T
Q  116 aaaacgacaattattttaa 134  Q
    |||| || |||| ||||||    
T  7828086 aaaatgataatttttttaa 7828104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 42803683 - 42803796
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    |||||||||||||||  |||||| ||||||||||||||||||||||||||||| ||||| || |  ||| | ||||||||||| |||||| ||| |||||    
T  42803683 ttattaattgtagttaatggagtggttaagttggatgaaattcaataaataagagtataata-ttaaaagaaaataataaatgatgcattagtactgtaa 42803781  T
Q  118 aacgacaattatttt 132  Q
    || ||||||||||||    
T  42803782 aatgacaattatttt 42803796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 135
Target Start/End: Complemental strand, 29570442 - 29570325
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    |||||||||||||||  |||| ||||||||||||||||||||||||||||||| ||||| ||||| ||| | || |||||| | || |||||||||||||    
T  29570442 ttattaattgtagttaatggaatagttaagttggatgaaattcaataaataagagtataatagtgaaaagaaaaaaataaacgttgtattggtattgtaa 29570343  T
Q  118 aacgacaattattttaag 135  Q
    |  || ||||| ||||||    
T  29570342 agtgataattactttaag 29570325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 31655105 - 31655035
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaa 86  Q
    ||||||||||||||||| |||||||| ||| |||| ||||||||||||||||||||||||| |||||||||    
T  31655105 ccttattaattgtagttagtggagtaattatgttgaatgaaattcaataaataagggtataatagtggaaa 31655035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 11796230 - 11796340
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    ||||||||||||||| ||| |||||||||||| ||||||||| |||||||||| ||||| |||||||||||    |||||||||| ||||  |||| |||    
T  11796230 ttattaattgtagttagtgtagtagttaagttagatgaaatttaataaataagagtatactagtggaaaaa----aataaatgctacattattattttaa 11796325  T
Q  118 aacgacaattatttt 132  Q
    |  ||||||||||||    
T  11796326 agtgacaattatttt 11796340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 38 - 119
Target Start/End: Complemental strand, 32439902 - 32439821
Alignment:
Q  38 agtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaaa 119  Q
    ||||||||||||||||||||||||||||||| || |||| ||||||||||| || |||||||| || ||||||||| |||||    
T  32439902 agtagttaagttggatgaaattcaataaatagggatataatagtggaaaaaaaacaataaatgttgtattggtattctaaaa 32439821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 2588122 - 2588239
Alignment:
Q  16 ccttattaattgtagttggtgg--agtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtatt 113  Q
    ||||||||||||||||| |||   ||||||||| |||||| || ||||||||||||||||||  || || |||||||| |||||||||||||||| ||||    
T  2588122 ccttattaattgtagttagtgtgcagtagttaaattggataaagttcaataaataagggtattataatgaaaaaataa-aataaatgctgcattgatatt 2588220  T
Q  114 gtaaaacgacaattatttt 132  Q
     ||||  ||||||||||||    
T  2588221 ctaaagtgacaattatttt 2588239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 40 - 118
Target Start/End: Complemental strand, 41478813 - 41478734
Alignment:
Q  40 tagttaagttggatgaaattcaataaataagggtatagtagt-ggaaaaataataataaatgctgcattggtattgtaaa 118  Q
    |||||||||||||||||||||||||||||| |||||| |||| | ||||||||||||||||| ||||||| |||| ||||    
T  41478813 tagttaagttggatgaaattcaataaataaaggtataatagtagaaaaaataataataaatgttgcattgatattctaaa 41478734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 40 - 118
Target Start/End: Complemental strand, 41480179 - 41480100
Alignment:
Q  40 tagttaagttggatgaaattcaataaataagggtatagtagtg-gaaaaataataataaatgctgcattggtattgtaaa 118  Q
    |||||||||||||||||||||||||||||| |||||| |||||  ||||||||||||||||| ||||||| |||| ||||    
T  41480179 tagttaagttggatgaaattcaataaataaaggtataatagtgaaaaaaataataataaatgttgcattgatattctaaa 41480100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 15818545 - 15818658
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    |||||||||||| |  ||||||||||||| |||||||||||| ||||||||| || ||| ||||||||| | | |||| |||| ||||||||||||||||    
T  15818545 ttattaattgtaatcagtggagtagttaaattggatgaaatttaataaataaaggcataatagtggaaaca-agtaattaatgttgcattggtattgtaa 15818643  T
Q  118 aacgacaattatttt 132  Q
    |  |||| |||||||    
T  15818644 agtgacagttatttt 15818658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 22848445 - 22848511
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtg 82  Q
    |||||||||||||||||  |||||||||||  ||||||||||||||||||||||||||||| |||||    
T  22848445 ccttattaattgtagttaatggagtagttagattggatgaaattcaataaataagggtataatagtg 22848511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 29374392 - 29374322
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaa 88  Q
    ||||||||||||||| ||||||||||||| ||| || |||||||||||||||||||||| ||||| |||||    
T  29374392 ttattaattgtagttagtggagtagttaaattgaataaaattcaataaataagggtataatagtgaaaaaa 29374322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 118
Target Start/End: Original strand, 41062221 - 41062321
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| || || || ||||| |||||| | ||||||||||||||||||  || |||||||  ||||||||||| |||||||||||| |    
T  41062221 ccttattaattgtagttagtagaataattaagctggatggagttcaataaataagggtattataatggaaaa--aataataaatgttgcattggtattct 41062318  T
Q  116 aaa 118  Q
    |||    
T  41062319 aaa 41062321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 132
Target Start/End: Complemental strand, 41492288 - 41492195
Alignment:
Q  40 tagttaagttggatgaaattcaataaataagggtatagtagtgg-aaaaataataataaatgctgcattggtattgtaaaacgacaattatttt 132  Q
    |||||||||||||||||||||||||||||| | |||| ||| || |||||||||||||| ||||  |||| |||| ||||  ||||||||||||    
T  41492288 tagttaagttggatgaaattcaataaataaagatataatagaggaaaaaataataataagtgctttattgatattctaaagtgacaattatttt 41492195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 27580652 - 27580599
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataa 69  Q
    ||||||||||||||||| ||||||||||||||||| |||||||| | |||||||    
T  27580652 ccttattaattgtagttagtggagtagttaagttgaatgaaattaattaaataa 27580599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 7330558 - 7330445
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgta 116  Q
    |||||||||| || || ||||||||||||| |||||| ||||| |||| |||| |||||| || | |||||| |||||| |||| ||||||| |||| ||    
T  7330558 cttattaattctaattagtggagtagttaa-ttggataaaatttaatacataaaggtatattactagaaaaa-aataattaatgttgcattgatatttta 7330461  T
Q  117 aaacgacaattatttt 132  Q
    ||| || |||||||||    
T  7330460 aaatgataattatttt 7330445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 132
Target Start/End: Original strand, 10598214 - 10598316
Alignment:
Q  29 agttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaaacgacaatta 128  Q
    |||| ||| |||||||||||||||| ||||| ||||||||| | ||||  ||| |||||| || ||||| | || |||||||||| ||||| ||||||||    
T  10598214 agttagtgtagtagttaagttggataaaatttaataaataaagatataacagttgaaaaa-aaaaataactactacattggtattttaaaatgacaatta 10598312  T
Q  129 tttt 132  Q
    ||||    
T  10598313 tttt 10598316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 132
Target Start/End: Original strand, 30512757 - 30512863
Alignment:
Q  26 tgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggta-ttgtaaaacgaca 124  Q
    ||||||| ||| | |||||||||||||||||||| ||||||||||| |||| |  |||||||| |  ||| |||| |||||| ||| ||||||| |||||    
T  30512757 tgtagttagtgaaatagttaagttggatgaaatttaataaataaggatataatgatggaaaaa-ataaatgaatgttgcattagtatttgtaaagcgaca 30512855  T
Q  125 attatttt 132  Q
    ||||||||    
T  30512856 attatttt 30512863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 132
Target Start/End: Original strand, 30553097 - 30553203
Alignment:
Q  26 tgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggta-ttgtaaaacgaca 124  Q
    ||||||| ||| | |||||||||||||||||||| ||||||||||| |||| |  |||||||| |  ||| |||| |||||| ||| ||||||| |||||    
T  30553097 tgtagttagtgaaatagttaagttggatgaaatttaataaataaggatataatgatggaaaaa-ataaatgaatgttgcattagtatttgtaaagcgaca 30553195  T
Q  125 attatttt 132  Q
    ||||||||    
T  30553196 attatttt 30553203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 39325903 - 39325836
Alignment:
Q  28 tagttggtggagtagttaagttggatgaaattcaataaat-aagggtatagtagtggaaaaataataa 94  Q
    ||||| |||||||||||||||||||| ||||||||||||| || | |||| ||||||||||| |||||    
T  39325903 tagttagtggagtagttaagttggattaaattcaataaataaatgatataatagtggaaaaaaaataa 39325836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 11904252 - 11904190
Alignment:
Q  21 ttaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtgg 83  Q
    |||||||||||||||||||||||||| || ||| ||| ||||||| ||||| |||| ||||||    
T  11904252 ttaattgtagttggtggagtagttaaattcgataaaaatcaataattaaggctataatagtgg 11904190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 58
Target Start/End: Original strand, 38161473 - 38161515
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaat 58  Q
    |||||||||| |||||| |||||||||||||||||||||||||    
T  38161473 ccttattaatcgtagttagtggagtagttaagttggatgaaat 38161515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 11761383 - 11761431
Alignment:
Q  40 tagttaagttggatgaaattcaataaataagggtatagtagtggaaaaa 88  Q
    |||||||||||| || ||||||||||||||| ||||| |||||||||||    
T  11761383 tagttaagttggttggaattcaataaataagcgtataatagtggaaaaa 11761431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 76
Target Start/End: Complemental strand, 41478855 - 41478819
Alignment:
Q  40 tagttaagttggatgaaattcaataaataagggtata 76  Q
    |||||||||| ||||||||||||||||||||||||||    
T  41478855 tagttaagttagatgaaattcaataaataagggtata 41478819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 76
Target Start/End: Complemental strand, 41492330 - 41492294
Alignment:
Q  40 tagttaagttggatgaaattcaataaataagggtata 76  Q
    |||||||||| ||||||||||||||||||||||||||    
T  41492330 tagttaagttagatgaaattcaataaataagggtata 41492294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 39213397 - 39213295
Alignment:
Q  17 cttattaattgtagttggtggagtagtta-agttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    |||||||||| ||||| |||||||||||| || ||  |||||  || |||||||||| ||  ||||||||||| ||||||||||| || ||||||||| |    
T  39213397 cttattaattatagttagtggagtagttatagatgattgaaaaacattaaataagggcatgttagtggaaaaa-aataataaatgttgtattggtattat 39213299  T
Q  116 aaaa 119  Q
    ||||    
T  39213298 aaaa 39213295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Complemental strand, 3076654 - 3076620
Alignment:
Q  38 agtagttaagttggatgaaattcaataaataaggg 72  Q
    |||||||||||| ||||||||||||||||||||||    
T  3076654 agtagttaagttagatgaaattcaataaataaggg 3076620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 26285542 - 26285592
Alignment:
Q  19 tattaattgtagttggtggagtagttaagttggatgaaattcaataaataa 69  Q
    ||||||||||||||  || ||||||||||||| || |||||||||||||||    
T  26285542 tattaattgtagttaatgaagtagttaagttgtataaaattcaataaataa 26285592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 29856098 - 29856056
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaatt 59  Q
    |||||||||||||||| ||||||||||||||||| ||| ||||    
T  29856098 cttattaattgtagttagtggagtagttaagttgaatgcaatt 29856056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 15439382 - 15439469
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcatt 107  Q
    |||||||||||| || | | |||||||||||| ||| || || |||||||||||||||| || |  ||||||||||||||||| ||||||    
T  15439382 ttattaattgtatttagagtagtagttaagtttgattaattt-aataaataagggtataataatt-aaaaataataataaatgttgcatt 15439469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 18841529 - 18841449
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaat 99  Q
    ||||||||||||||| ||| | || |||| |||| |||||||||||||||||   ||||  |||| ||||||||||||||||    
T  18841529 ttattaattgtagttagtgaaataattaaattgggtgaaattcaataaataaaaatata-aagtgaaaaaataataataaat 18841449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 7e-36; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 11656008 - 11656124
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| || ||| |||| ||||||||||||||||||| |||| |    
T  11656008 ccttattaattgtagttagtggagtagtaaagttggatgaaattcaataaataagggtataataatgggaaaaaaataataaatgctgcattgatattct 11656107  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  11656108 aaagtgacaattatttt 11656124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 181606 - 181494
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||| |||||||||    
T  181606 ttattaattatagttagtggagtagttaagttggatgaaattcaataaataagggtataatagt-gaaaaataataataaatgttgcatt-gtattgtaa 181509  T
Q  118 aacgacaattatttt 132  Q
    |  ||||||||||||    
T  181508 agtgacaattatttt 181494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 29363358 - 29363241
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtgg-aaaaataataataaatgctgcattggtattg 114  Q
    ||||||||||||||||| | ||| ||||||||||||||||||||||||||||||| ||||| || ||| ||||||||||||||||||||||||||||||     
T  29363358 ccttattaattgtagttagcggattagttaagttggatgaaattcaataaataagagtataataatggaaaaaataataataaatgctgcattggtattc 29363259  T
Q  115 taaaacgacaattatttt 132  Q
    | ||  ||||||||||||    
T  29363258 tgaagtgacaattatttt 29363241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 34657626 - 34657742
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaata--ataataaatgctgcattggtattgt 115  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||| ||||||||||| |  ||||||||| |||||| ||||||||    
T  34657626 ttattaattgtagttagtggagtagttaagttggatgaaattcaataaataaatgtataatagtggaaaaaaaatataataaattctgcataggtattgt 34657725  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  34657726 aaagtgacaattatttt 34657742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 6801983 - 6801867
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||  || |||||||| ||||||||||| ||||||| |||| |    
T  6801983 ccttattaattgtagttagtggagtagttaagttggatgaagttcgataaataagggtattataatggaaaaaaaataataaatgttgcattgatattat 6801884  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  6801883 aaagtgacaattatttt 6801867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 5302403 - 5302288
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    |||||||||||||||||  |||||||||||||||||||||| ||||||||||| ||||||  || |||||||| |||||||||||||||||| ||||| |    
T  5302403 ccttattaattgtagttaatggagtagttaagttggatgaagttcaataaatacgggtattataatggaaaaa-aataataaatgctgcattagtattct 5302305  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  5302304 aaagtgacaattatttt 5302288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 15058169 - 15058052
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||| ||||  | ||| ||||||||||| ||||| |||||| |    
T  15058169 ccttattaattgtagttagtgaagtatttaagttggatgaaattcaataaataagggtataatagt--acaaaaaataataaatgttgcatcggtattat 15058072  T
Q  116 aaaacgacaattattttaag 135  Q
    |||  |||||||||||||||    
T  15058071 aaagtgacaattattttaag 15058052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 30716952 - 30716836
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| |||||||||| ||||||||| |||||||||||||||| ||||  || |||||||| ||||||||||| |||| ||||||| |    
T  30716952 ccttattaattgtagttagtggagtagtaaagttggataaaattcaataaataagagtattataatggaaaaaaaataataaatgttgcactggtattct 30716853  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  30716852 aaagtgacaattatttt 30716836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 34300047 - 34299928
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||| ||| ||| |||||||||||||||||  ||||||||||||||| |||| ||||||||| | ||||||||||| || |||| |||| |    
T  34300047 ccttattaattgtggttagtgaagtagttaagttggatggtattcaataaataaggatatattagtggaaagaaaataataaatgttgtattgatattct 34299948  T
Q  116 aaaacgacaattattttaag 135  Q
    |||  |||||||||||||||    
T  34299947 aaagtgacaattattttaag 34299928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 31894274 - 31894371
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    ||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||| |||||   ||| ||||||||||| ||||||| ||||||||    
T  31894274 ttattaattgtagttagtgaagtagttaagttggatgaaatttaataaataagggtataatagtg---aaaaaataataaatgttgcattgatattgtaa 31894370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 24983511 - 24983579
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtgga 84  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  24983511 ccttattaattgtagttagtggagtagttaagttgggtgaaattcaataaataagggtatattagtgga 24983579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 34 - 132
Target Start/End: Complemental strand, 21010207 - 21010108
Alignment:
Q  34 gtggagtagttaagttggatgaaattcaataaataagggtatagtagtgg-aaaaataataataaatgctgcattggtattgtaaaacgacaattatttt 132  Q
    ||||||||||||||||||||||||||||||||||||  ||||| || ||| ||||| ||| |||||||||||||||||||| ||||  ||||||||||||    
T  21010207 gtggagtagttaagttggatgaaattcaataaataacagtataataatggaaaaaaaaattataaatgctgcattggtattataaagtgacaattatttt 21010108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 38 - 132
Target Start/End: Original strand, 21425641 - 21425736
Alignment:
Q  38 agtagttaagttggatgaaattcaataaataagggtatagtagtgg-aaaaataataataaatgctgcattggtattgtaaaacgacaattatttt 132  Q
    |||||||||||||||||||||||||||||||||| |||| | |||| ||||||||||||||||| ||||||| |||||||||   |||||||||||    
T  21425641 agtagttaagttggatgaaattcaataaataaggatataatggtggaaaaaataataataaatgttgcattgatattgtaaagtaacaattatttt 21425736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 11143649 - 11143763
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||| ||||| ||| ||||||||||||||||||| ||||||||||||||||||  || ||  |||| |||||||||||||||||||||| | |    
T  11143649 ccttattaattatagttagtgaagtagttaagttggatgaagttcaataaataagggtattataatg--aaaaaaataataaatgctgcattggtagtct 11143746  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||| ||||    
T  11143747 aaagtgacaattttttt 11143763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 132
Target Start/End: Original strand, 1063671 - 1063779
Alignment:
Q  22 taattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaaacg 121  Q
    ||||||||||| ||||||||||||||||  |||||||| ||||| |||||||||| |  |||||||  ||||||||||||| ||| |||||| ||||| |    
T  1063671 taattgtagttagtggagtagttaagttaaatgaaatttaataagtaagggtataatgatggaaaa--aataataaatgctacatcggtattttaaaatg 1063768  T
Q  122 acaattatttt 132  Q
    |||||||||||    
T  1063769 acaattatttt 1063779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 13909476 - 13909361
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| |||||||| ||||||| ||||||||| |||||||||| ||||| || ||  |||| ||||||||||| || |||| ||| ||    
T  13909476 ccttattaattgtagttagtggagtaattaagttagatgaaattgaataaataagagtataataatgagaaaaaaataataaatgttgtattgatatcgt 13909377  T
Q  116 aaaacgacaattattt 131  Q
    ||||  ||||||||||    
T  13909376 aaaattacaattattt 13909361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 32440707 - 32440803
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtatt 113  Q
    |||||||||||||| || || ||||||||||||||||||||||  ||||||||| |||| | || ||| |||||||||||||||||||||||| ||||    
T  32440707 ccttattaattgtaattagtagagtagttaagttggatgaaatgtaataaataaaggtacaataatgg-aaaataataataaatgctgcattgatatt 32440803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 53 - 130
Target Start/End: Original strand, 27367524 - 27367602
Alignment:
Q  53 tgaaattcaataaataagggtatagtagtggaaaaataa-taataaatgctgcattggtattgtaaaacgacaattatt 130  Q
    |||||||||||||||||||||||| ||||||||||| || ||||||||| | |||||||||||||||  ||||||||||    
T  27367524 tgaaattcaataaataagggtataatagtggaaaaaaaactaataaatgttacattggtattgtaaagtgacaattatt 27367602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 53 - 130
Target Start/End: Original strand, 27457871 - 27457949
Alignment:
Q  53 tgaaattcaataaataagggtatagtagtggaaaaataa-taataaatgctgcattggtattgtaaaacgacaattatt 130  Q
    |||||||||||||||||||||||| ||||||||||| || ||||||||| | |||||||||||||||  ||||||||||    
T  27457871 tgaaattcaataaataagggtataatagtggaaaaaaaactaataaatgttacattggtattgtaaagtgacaattatt 27457949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 15046171 - 15046111
Alignment:
Q  20 attaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagt 81  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||    
T  15046171 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtataatagt 15046111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 7920290 - 7920178
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgta 116  Q
    |||||||||||||||| ||| |||| |||| ||| |||||||||||||||||| |||||| |||| ||||||||  |||||||| ||||||| |||| ||    
T  7920290 cttattaattgtagttagtgaagtatttaatttgaatgaaattcaataaataatggtataatagt-gaaaaata--aataaatgttgcattgatattcta 7920194  T
Q  117 aaacgacaattatttt 132  Q
    ||  || |||||||||    
T  7920193 aagtgataattatttt 7920178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 23142719 - 23142605
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||| | |||||||||||||| | |||||||||||||||| || |||||| || ||| |||| ||  ||||||| ||||||| ||||||    
T  23142719 ccttattaattgtaggtagtggagtagttaagctagatgaaattcaataaagaa-ggtataataatgggaaaa-aacgataaatgttgcattgatattgt 23142622  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  23142621 aaagtgacaattatttt 23142605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 132
Target Start/End: Original strand, 3720304 - 3720418
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgta 116  Q
    |||||||||||||||| ||||| ||||||||||| |||||||||| |||||||| ||||| ||||||      || |||||||| |||||||| ||||||    
T  3720304 cttattaattgtagttagtggaatagttaagttgaatgaaattcagtaaataagagtataatagtgg-gggggaaaaataaatgatgcattggcattgta 3720402  T
Q  117 aaacgacaattatttt 132  Q
    ||  ||||||||||||    
T  3720403 aattgacaattatttt 3720418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 3291832 - 3291890
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtata 76  Q
    ||||||||||||||| ||| |||||||||||||||| |||||||||||||||| |||||    
T  3291832 ttattaattgtagttagtgaagtagttaagttggataaaattcaataaataagtgtata 3291890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 132
Target Start/End: Original strand, 21478194 - 21478272
Alignment:
Q  55 aaattcaataaataagggtatagtagtggaaaa-ataataataaatgctgcattggtattgtaaaacgacaattatttt 132  Q
    |||| |||||||||||| |||| |||||||||| ||||||||||||| || ||||||||||||||  ||||||||||||    
T  21478194 aaatgcaataaataaggttataatagtggaaaaaataataataaatgttgtattggtattgtaaagtgacaattatttt 21478272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 135
Target Start/End: Complemental strand, 15582326 - 15582219
Alignment:
Q  25 ttgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaaacgaca 124  Q
    |||||||| ||| ||| ||||||||  |||||||||||||||||||| |||  ||||| ||||||||||||   |  ||||||| |||| ||||| ||||    
T  15582326 ttgtagttagtgaagtggttaagtttaatgaaattcaataaataaggatatgatagtgaaaaaataataat---tattgcattgatattctaaaatgaca 15582230  T
Q  125 attattttaag 135  Q
    |||||||||||    
T  15582229 attattttaag 15582219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 118
Target Start/End: Original strand, 4367315 - 4367418
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtg-gaaaaataataataaatgctgcattggtattg 114  Q
    ||||||||| ||||||| ||| ||||||||||||| |||||||| |||||||||||| ||| ||  |  ||||||||||||||||| || |||| ||||     
T  4367315 ccttattaactgtagttagtgaagtagttaagttgcatgaaatttaataaataagggaataataaagaaaaaaataataataaatgatgtattgttattc 4367414  T
Q  115 taaa 118  Q
    ||||    
T  4367415 taaa 4367418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 13087582 - 13087528
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataag 70  Q
    ||||||||||| ||||| ||| |||| ||||||||||||||||||||||||||||    
T  13087582 ccttattaattatagttagtgaagtaattaagttggatgaaattcaataaataag 13087528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 1781854 - 1781742
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| ||||||| ||||||||| ||||||||||||||| || |||||| ||||||   || || || ||||| |||| || ||||||    
T  1781854 ccttattaattgtagttagtggagt-gttaagttgaatgaaattcaataaa-aaaggtataatagtgg--gaagaaaaaaaaatgttgcaatgatattgt 1781759  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  1781758 aaagtgacaattatttt 1781742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 22398464 - 22398412
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataa 69  Q
    ||||||||||||||||  || |||||||||||| |||||||||||||||||||    
T  22398464 cttattaattgtagttattgaagtagttaagttagatgaaattcaataaataa 22398412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 17828990 - 17828931
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatag 77  Q
    ||||||||||||||| ||| |||| ||||||||||||||||| ||| |||||| ||||||    
T  17828990 ttattaattgtagttagtgaagtaattaagttggatgaaatttaattaataagagtatag 17828931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 13206896 - 13206954
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtata 76  Q
    ||||||||||||||| ||||||| ||||| |||  || |||||||||||||||||||||    
T  13206896 ttattaattgtagttagtggagttgttaaattgagtgtaattcaataaataagggtata 13206954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 38 - 88
Target Start/End: Original strand, 28106013 - 28106063
Alignment:
Q  38 agtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaa 88  Q
    ||||||||||||| |||||||||||||||||| | |||| |||||||||||    
T  28106013 agtagttaagttgaatgaaattcaataaataatgatataatagtggaaaaa 28106063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 33510190 - 33510132
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtata 76  Q
    |||||||||||| ||  | ||||||||||||||||||||||| | ||||||||||||||    
T  33510190 ttattaattgtaattaattgagtagttaagttggatgaaatttattaaataagggtata 33510132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 1956042 - 1956142
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgta 116  Q
    |||||||||||||||| ||| ||||| |  ||| ||| ||||||||||||||| |||||| || ||  |||| ||||||||||| ||||||| |||| ||    
T  1956042 cttattaattgtagttagtgaagtagctgtgttcgataaaattcaataaataa-ggtataataatgagaaaaaaataataaatgttgcattgttattata 1956140  T
Q  117 aa 118  Q
    ||    
T  1956141 aa 1956142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 16205221 - 16205274
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataag 70  Q
    |||||||||||||||| ||||| || ||||||| ||||||| ||||||||||||    
T  16205221 cttattaattgtagttagtggaatatttaagttagatgaaactcaataaataag 16205274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 27367227 - 27367276
Alignment:
Q  83 gaaaaataataataaatgctgcattggtattgtaaaacgacaattatttt 132  Q
    |||||||||||||||||| |||||||||||| ||||  ||||||||||||    
T  27367227 gaaaaataataataaatgatgcattggtattctaaagtgacaattatttt 27367276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 27457574 - 27457623
Alignment:
Q  83 gaaaaataataataaatgctgcattggtattgtaaaacgacaattatttt 132  Q
    |||||||||||||||||| |||||||||||| ||||  ||||||||||||    
T  27457574 gaaaaataataataaatgatgcattggtattctaaagtgacaattatttt 27457623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 17835434 - 17835342
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtatt 113  Q
    ||||||||||||||| ||  |||||||||||||||||| |||| || ||||| |||||| ||  ||||||  ||||| ||||| ||||||||||||    
T  17835434 ttattaattgtagtttgtttagtagttaagttggatgatattc-attaataatggtataatataggaaaa--aataacaaatgttgcattggtatt 17835342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 1225098 - 1225040
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtata 76  Q
    |||||||||| ||||| ||| || ||||||||||||| ||||| ||||||||||||||||    
T  1225098 cttattaattttagttagtgaagaagttaagttggat-aaattgaataaataagggtata 1225040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 108
Target Start/End: Complemental strand, 8695096 - 8695006
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattg 108  Q
    |||||||||||||||| ||| ||| ||||| |    |||||||| |||||||||  |||| |||||||||| |||||||||||| |||||||    
T  8695096 cttattaattgtagttagtgaagtggttaaatgaagtgaaattctataaataagaatatactagtggaaaa-taataataaatgttgcattg 8695006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 76
Target Start/End: Original strand, 31283488 - 31283523
Alignment:
Q  41 agttaagttggatgaaattcaataaataagggtata 76  Q
    ||||||||||||||||||||||||||||||| ||||    
T  31283488 agttaagttggatgaaattcaataaataaggatata 31283523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 87
Target Start/End: Original strand, 30438701 - 30438738
Alignment:
Q  50 ggatgaaattcaataaataagggtatagtagtggaaaa 87  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  30438701 ggatgaaattgaataaataagggtataatagtggaaaa 30438738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 130
Target Start/End: Original strand, 13207219 - 13207267
Alignment:
Q  82 ggaaaaataataataaatgctgcattggtattgtaaaacgacaattatt 130  Q
    ||||||||||||||||||| |||||||||| | ||||  ||||||||||    
T  13207219 ggaaaaataataataaatgttgcattggtagtctaaagtgacaattatt 13207267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 7e-36; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 17695381 - 17695265
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtgga-aaaataataataaatgctgcattggtattgt 115  Q
    |||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||| |    
T  17695381 cttattaattatagttagtagagtagttaagttggatgaaattcaataaataagggtataatagtggaaaaaataataataaatgctgcattgatattct 17695282  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  17695281 aaagtgacaattatttt 17695265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 9458327 - 9458441
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||| || |||||||  |||||||||||||||||||||||| |    
T  9458327 ccttattaattgtagttagtggagtagtaaagttggatgaaatttaataaataagggtataataatggaaaa--aataataaatgctgcattggtattct 9458424  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  9458425 aaagtgacaattatttt 9458441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 132
Target Start/End: Original strand, 36354505 - 36354618
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgta 116  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| || |||||||  |||||||||| ||||||||||||| ||    
T  36354505 cttattaattgtagttagtggagtagttaagttggatgaaattcaataaataatggtataataatggaaaa--aataataaattctgcattggtattcta 36354602  T
Q  117 aaacgacaattatttt 132  Q
    ||  ||||||||||||    
T  36354603 aagtgacaattatttt 36354618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 3323335 - 3323448
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| |||| || || |||||| |||| ||||||||||||||||||||||||||||    
T  3323335 ttattaattgtagttagtggagtagttaagttggatgaaattcaataagtaagagtgtaatagtgggaaaa-aataataaatgctgcattggtattgtaa 3323433  T
Q  118 aacgacaattatttt 132  Q
    |  || |||||||||    
T  3323434 agtgagaattatttt 3323448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 26 - 132
Target Start/End: Original strand, 7494909 - 7495015
Alignment:
Q  26 tgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaaacgacaa 125  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||| || || ||||| |||||||||||||||||||||||| ||||  |||||    
T  7494909 tgtagttagcggagtagttaagttggatgaaattcaataaataagggtataataatgaaaaaaaaataataaatgctgcattggtattctaaagtgacaa 7495008  T
Q  126 ttatttt 132  Q
    |||||||    
T  7495009 ttatttt 7495015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 25637531 - 25637417
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    |||||||||||||||   |||||||||||||||||||||||| ||||||||||||| || || |||||||| |||||||||||||||||||||||| |||    
T  25637531 ttattaattgtagttataggagtagttaagttggatgaaatttaataaataagggtgtaataatggaaaaaaaataataaatgctgcattggtattctaa 25637432  T
Q  118 aacgacaattatttt 132  Q
    |  ||||||||||||    
T  25637431 agtgacaattatttt 25637417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 34120500 - 34120613
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||| |||| ||||| || |||||||| |||||||||||||||||||||||| |||    
T  34120500 ttattaattgtagttagtggaatagttaagttggatgaaattcaataagtaagagtataataatggaaaaa-aataataaatgctgcattggtattttaa 34120598  T
Q  118 aacgacaattatttt 132  Q
    |  ||||||||||||    
T  34120599 agtgacaattatttt 34120613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 5789709 - 5789823
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| ||| | |||||||||||||||||||||||||||||| |||||| ||||||||||  ||||||||||| ||||||| ||||||    
T  5789709 ccttattaattgtagttagtgaaatagttaagttggatgaaattcaataaataatggtataatagtggaaaa--aataataaatgatgcattgatattgt 5789806  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  5789807 aaagtgacaattatttt 5789823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 37322480 - 37322366
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| || |||||||  ||||||||||||| ||| |||||| |    
T  37322480 ccttattaattgtagttagtggagtagttaagttagatgaaattcaataaataagggtataataatggaaaa--aataataaatgctacataggtattct 37322383  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  37322382 aaagtgacaattatttt 37322366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 35313939 - 35313824
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||| ||||||||||| | ||||||||| ||||||  ||||||    
T  35313939 ccttattaattgtagttagtggagtagttaagtttgatgaaattcaataaataagagtataatagtggaaaaa-agtaataaatgttgcattattattgt 35313841  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  35313840 aaagtgacaattatttt 35313824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 16463741 - 16463624
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtgg-aaaaataataataaatgctgcattggtattg 114  Q
    ||||||||||||||||| |||||||||| ||||| ||||||||| ||||||||| |||| | || ||| ||||||||||||||||||||||||||||||     
T  16463741 ccttattaattgtagttagtggagtagtaaagtttgatgaaatttaataaataatggtaaaataatggaaaaaataataataaatgctgcattggtattc 16463642  T
Q  115 taaaacgacaattatttt 132  Q
    ||||  ||||||||||||    
T  16463641 taaagtgacaattatttt 16463624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 14523433 - 14523548
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||| |||| || ||| |||||||||||||||| ||||||| |||| |    
T  14523433 ccttattaattgtagttagtggagtagttaagttagatgaaattcaattaataaggatataataatgg-aaaataataataaatgttgcattgatattct 14523531  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  14523532 aaagtgacaattatttt 14523548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 36794336 - 36794221
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||  || | |||||| |||||||||||||||||||||||| |    
T  36794336 ccttattaactgtagttagtggagtagttaagttggatgaagttcaataaataagggtattataat-gaaaaaaaataataaatgctgcattggtatttt 36794238  T
Q  116 aaaacgacaattatttt 132  Q
    |||  || |||||||||    
T  36794237 aaagtgataattatttt 36794221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 8947113 - 8947283
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggta---t 112  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| || ||  |||| ||||||||||  ||||||||||   |    
T  8947113 ccttattaattatagttagtggagtagttaagttggatgaaattcaataaataagggtataataatg--aaaaaaataataaatattgcattggtattgt 8947210  T
Q  113 tgtaaaacgacaattattttaagnnnnnnnnnnnntgctaaagagacaataattgtgagacggaaggaatata 185  Q
    ||||||| |||||||||||| |             ||||||| ||||||||||| ||||||||||||||||||    
T  8947211 tgtaaaatgacaattattttgaaaaaaaagaaaaatgctaaaaagacaataattatgagacggaaggaatata 8947283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 39785636 - 39785522
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgta 116  Q
    ||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||  || ||| |||| |||| ||||||||||||||||||| ||    
T  39785636 cttattaattgtagttaatggagtagttaagttggatgaagttcaataaataagggtattataatgggaaaa-aatagtaaatgctgcattggtattcta 39785538  T
Q  117 aaacgacaattatttt 132  Q
    ||  ||||||||||||    
T  39785537 aagtgacaattatttt 39785522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 43410478 - 43410361
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    |||||||||||||||||  |||||||||||||||| |||||||||||||||| || ||||| || |||||||| ||||||||||| |||||| ||||| |    
T  43410478 ccttattaattgtagttaatggagtagttaagttgaatgaaattcaataaatgagagtataataatggaaaaa-aataataaatgttgcattagtattct 43410380  T
Q  116 aaaacgacaattattttaa 134  Q
    |||  ||||||||||||||    
T  43410379 aaagtgacaattattttaa 43410361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 45235633 - 45235516
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtg-gaaaaataataataaatgctgcattggtattg 114  Q
    |||||||||||||||||  || | |||||||||| ||||||||||||||||||||| ||||||| ||  ||||||||||||||||| ||||||||||||     
T  45235633 ccttattaattgtagttaatgaaatagttaagtttgatgaaattcaataaataaggatatagtaatgaaaaaaataataataaatgttgcattggtatta 45235534  T
Q  115 taaaacgacaattatttt 132  Q
    ||||  ||||||||||||    
T  45235533 taaagtgacaattatttt 45235516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 5272204 - 5272317
Alignment:
Q  20 attaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaaa 119  Q
    ||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||| || ||| |||  ||||||||||| |||||| ||||| ||||     
T  5272204 attaattgtagttagtggagtaattaaattggatgaaattcaataaataagggtataataatgggaaa--aataataaatgttgcatttgtattctaaag 5272301  T
Q  120 cgacaattattttaag 135  Q
     |||||||||||||||    
T  5272302 tgacaattattttaag 5272317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 11742589 - 11742705
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    |||||||||||||||||  ||||||||||||||| |||||| |||||||||||||||||| ||  |||||||| ||||||||||| | |||| ||||| |    
T  11742589 ccttattaattgtagttaatggagtagttaagtttgatgaagttcaataaataagggtattgtcatggaaaaaaaataataaatgtttcattcgtattct 11742688  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  11742689 aaagtgacaattatttt 11742705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 132
Target Start/End: Original strand, 39329726 - 39329838
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgta 116  Q
    ||||||||||||||||  |||||||||||| |||||||||||||||||||||| | || | ||||||||||  ||||||||||||| ||||||||| |||    
T  39329726 cttattaattgtagtta-tggagtagttaaattggatgaaattcaataaataacgatacaatagtggaaaa--aataataaatgctacattggtatcgta 39329822  T
Q  117 aaacgacaattatttt 132  Q
    |||| |||||||||||    
T  39329823 aaacaacaattatttt 39329838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 34225642 - 34225525
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    |||||||||||||||||  ||||||| |||||||| |||||||| |||||||||||||||| || | |||||| |||||||||| |||||||||||||      
T  34225642 ccttattaattgtagttaatggagtatttaagttgaatgaaatttaataaataagggtataataat-gaaaaaaaataataaatactgcattggtattcc 34225544  T
Q  116 aaaacgacaattattttaa 134  Q
    |||  ||||||||||||||    
T  34225543 aaagtgacaattattttaa 34225525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 15359148 - 15359265
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtg-gaaaaataataataaatgctgcattggtattg 114  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||  || ||  ||||||| |||||||| |||||||| ||||     
T  15359148 ccttattaattgtagttagtggagtagttaagttggatgaagttcaataaataagggtattataatgaaaaaaatactaataaatactgcattgatattc 15359247  T
Q  115 taaaacgacaattatttt 132  Q
    ||||   |||||||||||    
T  15359248 taaagtaacaattatttt 15359265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 35242360 - 35242459
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||  ||||| |||| ||||| |||||||||||  |||||||||||| |||    
T  35242360 ttattaattgtagttagttgagtagttaagttggatgaaattcaataaataaaagtataatagt-gaaaactaataataaatattgcattggtattctaa 35242458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 25904813 - 25904724
Alignment:
Q  43 ttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaaacgacaattatttt 132  Q
    |||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||  |||| ||||  ||||||||||||    
T  25904813 ttaagttgaatgaaattcaataaattagggtataatagtggaaaaataataataaatgatgcattaatattttaaagtgacaattatttt 25904724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 43115864 - 43115964
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgta 116  Q
    |||||| ||||||||| ||||||||||||||||| |||||||||||  ||||| |||||| || |||||||| ||||||||||||| ||||| |||||||    
T  43115864 cttatttattgtagttagtggagtagttaagttgaatgaaattcaacgaataatggtataataatggaaaaa-aataataaatgctacattgatattgta 43115962  T
Q  117 aa 118  Q
    ||    
T  43115963 aa 43115964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 39691541 - 39691459
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatg 100  Q
    ||||||||||| |||| |||||||||| |||||| ||||||||||||||||||||||||| || ||| ||||||||||||||||    
T  39691541 cttattaattgcagttagtggagtagtaaagttgaatgaaattcaataaataagggtataataatgg-aaaataataataaatg 39691459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 21 - 134
Target Start/End: Complemental strand, 18202152 - 18202039
Alignment:
Q  21 ttaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaaac 120  Q
    |||| ||||||| ||| |||||||||||||||||||||| |||||||||  ||||  || ||| |||| ||||| ||||||||||||||||||  |||      
T  18202152 ttaaatgtagttagtgaagtagttaagttggatgaaatttaataaataaatgtattataatgggaaaaaaataacaaatgctgcattggtattcgaaagt 18202053  T
Q  121 gacaattattttaa 134  Q
    ||||||||||||||    
T  18202052 gacaattattttaa 18202039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 19937436 - 19937323
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgta 116  Q
    |||||||||||||||| ||||||||||||||||| || ||||||||||||||| |||||| || ||| |||| || | |||||| ||||||| |||  ||    
T  19937436 cttattaattgtagttagtggagtagttaagttgaataaaattcaataaataaaggtataataatgggaaaaaaaaattaaatgttgcattgttatacta 19937337  T
Q  117 aaacgacaattatt 130  Q
    ||  ||||||||||    
T  19937336 aagtgacaattatt 19937323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 135
Target Start/End: Complemental strand, 19444196 - 19444080
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    |||||||||||| || || ||||||||||| ||||| || ||||||||| ||||||||| || || ||||| ||||||||||| ||||||| |||| | |    
T  19444196 ttattaattgtaattagtcgagtagttaagatggataaatttcaataaacaagggtataataatgtaaaaa-aataataaatgttgcattgatattttga 19444098  T
Q  118 aacgacaattattttaag 135  Q
    |  |||||||||||||||    
T  19444097 agtgacaattattttaag 19444080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 26863421 - 26863490
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaa 87  Q
    ||||||||||||||| ||||||||||||||| |||||||||||| |||||||  ||||| ||||||||||    
T  26863421 ttattaattgtagttagtggagtagttaagtcggatgaaattcattaaataaatgtataatagtggaaaa 26863490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 17346425 - 17346476
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataa 69  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  17346425 ttattaattgtagttagtggagtagttaagttggaagaaattcaataaataa 17346476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 35 - 100
Target Start/End: Original strand, 7438932 - 7438996
Alignment:
Q  35 tggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatg 100  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||| | || |||||||||||    
T  7438932 tggagtagttaagttgaatgaaattcaataaataagggtataatagtgggacaa-aataataaatg 7438996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 16377717 - 16377831
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaa----gttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggta 111  Q
    ||||||||||||||||| |||||||||||||    |||||||||||||||||||||||  ||||| ||||| |||      || ||||| ||||||| ||    
T  16377717 ccttattaattgtagttagtggagtagttaattaagttggatgaaattcaataaataaaagtataatagtgaaaa------aaaaaatgttgcattgata 16377810  T
Q  112 ttgtaaaacgacaattatttt 132  Q
    || ||||| ||||||||||||    
T  16377811 ttctaaaatgacaattatttt 16377831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 16805933 - 16805833
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| ||||||| |||||||||||| ||||| |||| ||||||| ||| || | ||||||  |||||||||| ||||||| |||| |    
T  16805933 ccttattaattgtagttagtggagttgttaagttggattaaatttaatagataaggg-ataataat-gaaaaaagataataaatgatgcattgatattct 16805836  T
Q  116 aaa 118  Q
    |||    
T  16805835 aaa 16805833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 16845214 - 16845114
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| ||||||| |||||||||||| ||||| |||| ||||||| ||| || | ||||||  |||||||||| ||||||| |||| |    
T  16845214 ccttattaattgtagttagtggagttgttaagttggattaaatttaatagataaggg-ataataat-gaaaaaagataataaatgatgcattgatattct 16845117  T
Q  116 aaa 118  Q
    |||    
T  16845116 aaa 16845114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 31448754 - 31448812
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggta 74  Q
    ||||| |||||| |||| ||| | |||||||||||||||||||||||||||||||||||    
T  31448754 ccttactaattgcagttagtgaaatagttaagttggatgaaattcaataaataagggta 31448812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 18853263 - 18853336
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaata 90  Q
    ||||||| |||||||| || ||||| |||| |||||||||||||||||||||||| || | ||||| |||||||    
T  18853263 cttattagttgtagttagtagagtaattaatttggatgaaattcaataaataaggatacattagtgaaaaaata 18853336  T

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Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 28186266 - 28186151
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||| ||| ||||| |  |||||||||||||| ||||||||||||||||||    ||| |||||||||||| ||||| ||| |||||||  |||| |    
T  28186266 ccttattcattttagttagcagagtagttaagttgaatgaaattcaataaataaaaaaataatagtggaaaaat-ataattaatactgcatttatattat 28186168  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  28186167 aaagtgacaattatttt 28186151  T

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Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 16807824 - 16807741
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatg 100  Q
    ||||||||| ||||||  | |||| ||| |||| ||||||||||||||||||| | |||| ||||||||||| | |||||||||    
T  16807824 cttattaatagtagttaatagagttgttgagttagatgaaattcaataaataaagatatattagtggaaaaaaattaataaatg 16807741  T

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Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 16847105 - 16847022
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatg 100  Q
    ||||||||| ||||||  | |||| ||| |||| ||||||||||||||||||| | |||| ||||||||||| | |||||||||    
T  16847105 cttattaatagtagttaatagagttgttgagttagatgaaattcaataaataaagatatattagtggaaaaaaattaataaatg 16847022  T

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Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 28170646 - 28170727
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatg 100  Q
    |||||||||||||||  | || || |||| ||||||||||||| ||||||||| ||||| |||| |||||| |||||||||||    
T  28170646 ttattaattgtagttaatagaataattaaattggatgaaattctataaataagagtataatagt-gaaaaaaaataataaatg 28170727  T

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Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 32831238 - 32831296
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtata 76  Q
    |||||||||||||||  |||||||||||| |  ||||||||||||||||||| ||||||    
T  32831238 ttattaattgtagttattggagtagttaaatgagatgaaattcaataaataatggtata 32831296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 132
Target Start/End: Original strand, 34120638 - 34120697
Alignment:
Q  72 gtatagtagtggaaaaataataataaatgctgcattggtattgtaaaacgacaattatttt 132  Q
    ||||| || |||||||| |||||||||||||||||||||||| ||||  ||||||||||||    
T  34120638 gtataataatggaaaaa-aataataaatgctgcattggtattttaaagtgacaattatttt 34120697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 43699675 - 43699723
Alignment:
Q  34 gtggagtagttaagttggatgaaattcaataaataagggtatagtagtg 82  Q
    |||||||| ||||||||||| |||||||||||| ||||||||| |||||    
T  43699675 gtggagtaattaagttggataaaattcaataaacaagggtataatagtg 43699723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 26608205 - 26608264
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtata 76  Q
    |||||||||| ||||| ||||| ||||||||||| |||||| | | ||||||||||||||    
T  26608205 cttattaattatagttagtggattagttaagttgaatgaaaataattaaataagggtata 26608264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 38187947 - 38188050
Alignment:
Q  19 tattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaa 118  Q
    |||||||||||||| || |||||  |||||    ||||||||||||||||| ||||||  |||||||||||  ||||||||| ||  |||||||| ||||    
T  38187947 tattaattgtagttagtcgagtatgtaagtgaagtgaaattcaataaataatggtatatgagtggaaaaat--taataaatgttgatttggtattctaaa 38188044  T
Q  119 acgaca 124  Q
    | ||||    
T  38188045 atgaca 38188050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 68
Target Start/End: Original strand, 1206775 - 1206804
Alignment:
Q  39 gtagttaagttggatgaaattcaataaata 68  Q
    ||||||||||||||||||||||||||||||    
T  1206775 gtagttaagttggatgaaattcaataaata 1206804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 43730667 - 43730615
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataa 69  Q
    |||||||||||||||||  | |||||||||||| || |||||||||||||||||    
T  43730667 ccttattaattgtagttactagagtagttaagtagg-tgaaattcaataaataa 43730615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 176
Target Start/End: Complemental strand, 3601389 - 3601361
Alignment:
Q  148 tgctaaagagacaataattgtgagacgga 176  Q
    |||||||||||||||||||||||||||||    
T  3601389 tgctaaagagacaataattgtgagacgga 3601361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 23492886 - 23492815
Alignment:
Q  53 tgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaaacgacaa 125  Q
    |||||| ||||||||||| ||||  ||||||||||  ||||||||||| || ||| ||||||||||| |||||    
T  23492886 tgaaatgcaataaataagagtatgttagtggaaaag-aataataaatgttgtatttgtattgtaaaaggacaa 23492815  T

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Target: chr8 (Bit Score: 76; Significance: 3e-35; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 16 - 135
Target Start/End: Original strand, 11977000 - 11977118
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| || ||||||||||||| ||||||||||||||||||| |||||| ||| ||||||| ||||||||||||| |||| |||||||    
T  11977000 ccttattaattgtagttagtagagtagttaagttagatgaaattcaataaataaaggtataatagcggaaaaa-aataataaatgctacattagtattgt 11977098  T
Q  116 aaaacgacaattattttaag 135  Q
    |||| |||||||||||||||    
T  11977099 aaaatgacaattattttaag 11977118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 132
Target Start/End: Original strand, 45425731 - 45425846
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgta 116  Q
    |||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||| | ||||| |||||||    
T  45425731 cttattaattgtagttagtggagtaattaagttgtatgaaattcaataaataagggtataatagtggaaaaaaaataataaatgttacattgatattgta 45425830  T
Q  117 aaacgacaattatttt 132  Q
    ||  ||||||||||||    
T  45425831 aagtgacaattatttt 45425846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 44761558 - 44761671
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||| | ||||  ||||||||||||||||||    
T  44761558 ccttattaattgtagttagtggagtagttaagttggatgaaattcaataaatgagggtataatagtggaaaaa-actaat--atgctgcattggtattgt 44761654  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  44761655 aaagtgacaattatttt 44761671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 31231782 - 31231667
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||  || |||||||| ||||||||||| |||||||||||| |    
T  31231782 ccttattaattgtagttagtggagtagttaagttggataaagttcaataaataagggtattataatggaaaaa-aataataaatgatgcattggtattat 31231684  T
Q  116 aaaacgacaattatttt 132  Q
    |||| ||||||||||||    
T  31231683 aaaatgacaattatttt 31231667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 10180012 - 10180129
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgta 116  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||| |||||| ||||| || | | |||||||||||||||| |||||||||||| ||    
T  10180012 cttattaattgtagttagtggagtagttaagttgaatgaaattcaattaataagtgtataataatag-aaaataataataaatgttgcattggtattcta 10180110  T
Q  117 aaacgacaattattttaag 135  Q
    ||  |||||||||||||||    
T  10180111 aagtgacaattattttaag 10180129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 173
Target Start/End: Original strand, 21216165 - 21216320
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||  || |||||| |||| |||||| |  |||||||| ||||||||||||||    
T  21216165 ccttattaattgtagttagtggagtagttaagttggatgaaattcaataa--aatggtataatagtagaaaaaaataaataaatgttgcattggtattgt 21216262  T
Q  116 aaaacgacaattattttaagnnnnnnnnnnnntgctaaagagacaataattgtgagac 173  Q
    |||  |||||||||||| ||            ||||||||||||||||||||||||||    
T  21216263 aaagtgacaattattttcagaaaaagaaaaaatgctaaagagacaataattgtgagac 21216320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 9300177 - 9300294
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagt-ggaaaaataataataaatgctgcattggtattg 114  Q
    ||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||| |||| |||| || |||  |||||||||| ||||||||||||||    
T  9300177 ccttattaattttagttagtggagtagttaagttgaatgaaattcaataaataaggatataatagtggggaaagaaataataaatactgcattggtattg 9300276  T
Q  115 taaaacgacaattatttt 132  Q
    ||||  ||||||||||||    
T  9300277 taaagtgacaattatttt 9300294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 22771899 - 22772014
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| ||| |||| ||| |||||||||||||||||||||||||||||| || | ||||| |||||||||||| |||||||||||| |    
T  22771899 ccttattaattgtagttagtgaagtaattatgttggatgaaattcaataaataagggtataataat-gaaaagtaataataaatgttgcattggtattct 22771997  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  22771998 aaagtgacaattatttt 22772014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 17719322 - 17719436
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||| ||||| |||||||||||||||||||||||||| ||||||||| |||||| || ||||||||  |||||||||| |||||||||||| |    
T  17719322 ccttattaattatagttagtggagtagttaagttggatgaaatttaataaataaaggtataataatggaaaaa-gataataaatgttgcattggtattct 17719420  T
Q  116 aaaacgacaattattt 131  Q
    |||  |||||||||||    
T  17719421 aaagtgacaattattt 17719436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 132
Target Start/End: Original strand, 29226593 - 29226706
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgta 116  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| | || | ||||||| |||||||||||||||||| |||| ||    
T  29226593 cttattaattgtagttagtggagtagttaagttagatgaaattcaataaataagggtacaataat-gaaaaat-ataataaatgctgcattgatatttta 29226690  T
Q  117 aaacgacaattatttt 132  Q
    ||  ||||||||||||    
T  29226691 aagtgacaattatttt 29226706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 39405812 - 39405699
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    |||||||||  |||| |||||||| |||||||| |||||||| |||||||||||||||| |||| |||||||||||||||||||||||||| |||| |||    
T  39405812 ttattaattacagttagtggagtaattaagttgaatgaaattaaataaataagggtataatagt-gaaaaataataataaatgctgcattgatattctaa 39405714  T
Q  118 aacgacaattatttt 132  Q
    |  ||||||||||||    
T  39405713 agtgacaattatttt 39405699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 10098055 - 10098171
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||||| | |||  || |||||||| ||||||||||| || ||||||||| |    
T  10098055 ccttattaattgtagttagtggagtagttaagttggatgaagttcaataaataaagatattataatggaaaaaaaataataaatgatgtattggtattct 10098154  T
Q  116 aaaacgacaattatttt 132  Q
    |||   |||||||||||    
T  10098155 aaagtaacaattatttt 10098171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 26626176 - 26626291
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| ||||||||||   |||| ||||||||||||||||||||||||| || ||| |||| ||||||||||||||||||| |||| |    
T  26626176 ccttattaattgtagttagtggagtagtccggttgaatgaaattcaataaataagggtataataatgggaaaa-aataataaatgctgcattgatatttt 26626274  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  26626275 aaagtgacaattatttt 26626291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 135
Target Start/End: Original strand, 396675 - 396793
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    |||||||||||||||||  || ||||||||  |||||| ||||||||| |||||||||||| || || ||||||||||||||||| |||||||||||| |    
T  396675 ccttattaattgtagttaatgaagtagttatattggataaaattcaattaataagggtataataatg-aaaaataataataaatgttgcattggtattct 396773  T
Q  116 aaaacgacaattattttaag 135  Q
    |||  |||||||||||||||    
T  396774 aaagtgacaattattttaag 396793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 13335266 - 13335154
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    |||||||||| |||| || ||||||||||||| ||||||||||||||||| |||||||| || |||||||  ||||||||||| |||||||||||| |||    
T  13335266 ttattaattgcagttagtagagtagttaagtttgatgaaattcaataaatcagggtataataatggaaaa--aataataaatgttgcattggtattctaa 13335169  T
Q  118 aacgacaattatttt 132  Q
    |  ||||||||||||    
T  13335168 agtgacaattatttt 13335154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 7172964 - 7172880
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctg 103  Q
    |||||||||||||||  || ||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  7172964 ttattaattgtagttaatgaagtagttaagttgaatgaaattcaataaataagggtataatagtggaaaaa-aataataaatgctg 7172880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 39482667 - 39482549
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggt---atagtagtggaaaaataataataaatgctgcattggtat 112  Q
    ||||||||||| ||||| ||||| ||||||||| | ||||||||||||||||||||||   ||| |||||| |||| |||||||||| ||||||||||||    
T  39482667 ccttattaattatagttagtggactagttaagtggaatgaaattcaataaataagggtataataatagtgggaaaa-aataataaatactgcattggtat 39482569  T
Q  113 tgtaaaacgacaattatttt 132  Q
    ||||||  ||||||||||||    
T  39482568 tgtaaagtgacaattatttt 39482549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 134
Target Start/End: Original strand, 14855000 - 14855117
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtgg-aaaaataataataaatgctgcattggtattgta 116  Q
    ||||||||||||||| |||||||||||| | || ||||||||||||||| || |||||| |||||| ||||| ||||||||||  ||||||  |||||||    
T  14855000 ttattaattgtagttagtggagtagttaggctgaatgaaattcaataaagaatggtataatagtggaaaaaaaaataataaatattgcattaatattgta 14855099  T
Q  117 aaacgacaattattttaa 134  Q
    ||  ||||||||||||||    
T  14855100 aagtgacaattattttaa 14855117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 31271072 - 31270995
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataa 94  Q
    |||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||| |  |||||||||||    
T  31271072 cttattaattatagttagtggagtagttaagttggataaaattcaataaataagggtatagtaataaaaaaataataa 31270995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 32476339 - 32476225
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    |||||||||||||||||  || |||||||||||| ||||||||||||||||||||||||||  | ||  |||| ||||||| | |||||||||||||| |    
T  32476339 ccttattaattgtagttaatgaagtagttaagtttgatgaaattcaataaataagggtataacaatg--aaaaaaataatatacgctgcattggtattct 32476242  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  32476241 aaagtgacaattatttt 32476225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 4924133 - 4924229
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattg 114  Q
    |||||||||||||||  | |||||||||||||| |||||| | |||||||||||||||| ||||| ||||||||||||||||  || ||||||||||    
T  4924133 ttattaattgtagttaatagagtagttaagttgaatgaaacttaataaataagggtatattagtgaaaaaataataataaataatgtattggtattg 4924229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 39301020 - 39301135
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| ||| ||||||| ||||| ||||||||||||||||||  ||||| || ||| |||||||||||||| | | ||||| |||| |    
T  39301020 ccttattaattgtagttagtgaagtagttcagttgaatgaaattcaataaataaaagtataataatgg-aaaataataataaacgattcattgatattct 39301118  T
Q  116 aaaacgacaattatttt 132  Q
    |||| ||||||||||||    
T  39301119 aaaatgacaattatttt 39301135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 34948753 - 34948864
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||  | ||  |||| ||||||||||  |||||||||||| |||    
T  34948753 ttattaattgtagttagtggagtagttaagttggatgaaattcaataaataa-ggtataacaatg--aaaaaaataataaatattgcattggtattctaa 34948849  T
Q  118 aacgacaattatttt 132  Q
    |   |||||||||||    
T  34948850 agtaacaattatttt 34948864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 6796395 - 6796514
Alignment:
Q  18 ttattaattgtagttggtggagtagttaa----gttggatgaaattcaataaataagggtatagtagtggaaaa-ataataataaatgctgcattggtat 112  Q
    ||||||||||||||| |||||||||||||    |||| || ||||||| |||||||||||||| ||  |||||| ||||||||||||||||||||| |||    
T  6796395 ttattaattgtagttagtggagtagttaattaagttgaataaaattcattaaataagggtataataaaggaaaaaataataataaatgctgcattgctat 6796494  T
Q  113 tgtaaaacgacaattatttt 132  Q
     |||||  ||||||||||||    
T  6796495 cgtaaagtgacaattatttt 6796514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 4428417 - 4428494
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataat 95  Q
    ||||||||||||||| ||| | |||||||||| |||||||||||||||||||  ||||| ||||||||||||||||||    
T  4428417 ttattaattgtagttagtgaattagttaagttagatgaaattcaataaataaaagtataatagtggaaaaataataat 4428494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 52 - 130
Target Start/End: Original strand, 1875839 - 1875916
Alignment:
Q  52 atgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaaacgacaattatt 130  Q
    |||||||| |||||||||||||||| ||||||||||| | ||||||||| |||||||||||||||||  ||||||||||    
T  1875839 atgaaatttaataaataagggtatactagtggaaaaa-agtaataaatgttgcattggtattgtaaagtgacaattatt 1875916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 32678455 - 32678401
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataag 70  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  32678455 ccttattaattgtagttagtggagtagttaagttggatgaaattaaataaataag 32678401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 132
Target Start/End: Original strand, 36006954 - 36007068
Alignment:
Q  19 tattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtg-gaaaaataataataaatgctgcattggtattgtaa 117  Q
    |||||||||||||| |||| ||| ||||||| |||||||||||||||||||| | ||| |||||  |||||||| ||||| || |||||| ||||| |||    
T  36006954 tattaattgtagttagtggggtaattaagtttgatgaaattcaataaataagagcataatagtgaaaaaaataaaaataattgttgcattagtattctaa 36007053  T
Q  118 aacgacaattatttt 132  Q
    |  ||||||||||||    
T  36007054 agtgacaattatttt 36007068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 132
Target Start/End: Original strand, 5053218 - 5053331
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgta 116  Q
    |||||||||||||||| | ||||||||||| |||||||| |||||||||||||| ||||| || |||  ||  || |||||||| ||||||| |||| ||    
T  5053218 cttattaattgtagttagcggagtagttaaattggatgagattcaataaataagagtataataatggggaa--aaaaataaatgttgcattgatatttta 5053315  T
Q  117 aaacgacaattatttt 132  Q
    ||  ||||||||||||    
T  5053316 aagtgacaattatttt 5053331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 31082671 - 31082611
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtata 76  Q
    ||||||||||| ||||| |||||||||||||||||||||||||| ||||||||| ||||||    
T  31082671 ccttattaattatagttagtggagtagttaagttggatgaaatttaataaataaaggtata 31082611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 34 - 134
Target Start/End: Original strand, 34394040 - 34394139
Alignment:
Q  34 gtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaaacgacaattatttta 133  Q
    |||||||||||||||||||| || ||||||||||||| |||| ||| ||||||||   ||||||||  |||||||||||| ||||  |||||||||||||    
T  34394040 gtggagtagttaagttggataaagttcaataaataagagtattgtaatggaaaaa-gttaataaattatgcattggtattttaaagtgacaattatttta 34394138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 17823971 - 17823859
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    ||||||||||||||| ||| |||||||||||||||||||||| |||||||||  ||||| |||||||  |  ||||||||||  || |||| |||| |||    
T  17823971 ttattaattgtagttagtgaagtagttaagttggatgaaattaaataaataatagtataatagtggagga--aataataaatattgtattgttattataa 17823874  T
Q  118 aacgacaattatttt 132  Q
    |  ||||||||||||    
T  17823873 attgacaattatttt 17823859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 42887050 - 42886992
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtata 76  Q
    ||||||||||||||| |||| ||||||||||||||| |||||||||||||||| |||||    
T  42887050 ttattaattgtagttagtggcgtagttaagttggataaaattcaataaataagagtata 42886992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 132
Target Start/End: Original strand, 10953817 - 10953911
Alignment:
Q  34 gtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaaacgacaattatttt 132  Q
    |||||||||||||||| ||| |||||||||| ||||||||||| || ||    || ||||||||||| ||||||||||| |||||  ||||||||||||    
T  10953817 gtggagtagttaagttagatcaaattcaatatataagggtataataatg----aaaaataataaatgttgcattggtatcgtaaagtgacaattatttt 10953911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 132
Target Start/End: Original strand, 10961822 - 10961916
Alignment:
Q  34 gtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaaacgacaattatttt 132  Q
    |||||||||||||||| ||| |||||||||| ||||||||||| || ||    || ||||||||||| ||||||||||| |||||  ||||||||||||    
T  10961822 gtggagtagttaagttagatcaaattcaatatataagggtataataatg----aaaaataataaatgttgcattggtatcgtaaagtgacaattatttt 10961916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 27294125 - 27294185
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagt 78  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||||||  |||||||    
T  27294125 ttattaattgcagttagtggagtaattaagttggatgaaattcaataaataaatgtatagt 27294185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 40996429 - 40996485
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataaggg 72  Q
    ||||||||||||||||| ||| | | |||||||||||||||||||||||||||||||    
T  40996429 ccttattaattgtagttagtgaaatggttaagttggatgaaattcaataaataaggg 40996485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 52 - 135
Target Start/End: Complemental strand, 50832 - 50750
Alignment:
Q  52 atgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaaacgacaattattttaag 135  Q
    |||||||| ||||||||| |||||| || |||||||| | ||||||||||||||||| |||| ||||  |||||||||||||||    
T  50832 atgaaatttaataaataaaggtataataatggaaaaaga-taataaatgctgcattgatattctaaagtgacaattattttaag 50750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 131
Target Start/End: Original strand, 2767382 - 2767475
Alignment:
Q  37 gagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaaacgacaattattt 131  Q
    ||||||||||||||||| || ||||||||||||||||||  || |||||||| | ||||||||| || ||| ||||| ||||  |||||||||||    
T  2767382 gagtagttaagttggattaagttcaataaataagggtattatattggaaaaa-agtaataaatgttgtattagtattctaaagtgacaattattt 2767475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 135
Target Start/End: Original strand, 42181996 - 42182110
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    ||||||||| ||| ||||| ||||||||| |    || ||||||||||||||||||| | | |||  |||||||| ||||||| ||||||| |||| |||    
T  42181996 ttattaattatagctggtgaagtagttaaatatagtggaattcaataaataagggtacattggtg--aaaataattataaatgttgcattg-tattctaa 42182092  T
Q  118 aacgacaattattttaag 135  Q
    ||||||||||||||||||    
T  42182093 aacgacaattattttaag 42182110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 39466103 - 39466216
Alignment:
Q  18 ttattaattgtagttggtggagtagttaag-ttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgta 116  Q
    |||||||| || ||| ||| |||||||||  |||||| ||||||||||||||||| |||| |||||  |||| ||||||||||| || || |||||||||    
T  39466103 ttattaatcgtggttagtgcagtagttaaaattggataaaattcaataaataaggatataatagtg--aaaaaaataataaatgttgtatcggtattgta 39466200  T
Q  117 aaacgacaattatttt 132  Q
    ||  || |||||||||    
T  39466201 aagtgataattatttt 39466216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 1739594 - 1739535
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtata 76  Q
    |||||||||||||||| ||  ||||||||| || ||||||||| ||||||||||||||||    
T  1739594 cttattaattgtagttagttaagtagttaattttgatgaaatttaataaataagggtata 1739535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 40109727 - 40109650
Alignment:
Q  53 tgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaaacgacaattatttt 132  Q
    ||||||||||||||||||  |||| |||||||||||| |||||||||| ||||||  |||| ||||| ||||||||||||    
T  40109727 tgaaattcaataaataagaatatattagtggaaaaat-ataataaatgttgcatt-atattctaaaatgacaattatttt 40109650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 43719302 - 43719365
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagt 81  Q
    ||||||||| ||||| || || || ||||||||||||||||||||||||||| |||||| ||||    
T  43719302 ttattaattatagttagttgaataattaagttggatgaaattcaataaataaaggtataatagt 43719365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 35732170 - 35732113
Alignment:
Q  19 tattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtata 76  Q
    ||||||||||| || |||||||||| ||||| |||||||||||||| ||||| |||||    
T  35732170 tattaattgtaattagtggagtagtaaagttagatgaaattcaatatataagagtata 35732113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 5356650 - 5356602
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaa 66  Q
    |||||||||||||||  |||| || ||||||||||||||||||||||||    
T  5356650 ttattaattgtagttaatggaataattaagttggatgaaattcaataaa 5356602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 41092007 - 41091948
Alignment:
Q  56 aattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaa 118  Q
    ||||||||||||||||||||| |||| ||||||||  |||||||||||||||| |||| ||||    
T  41092007 aattcaataaataagggtataatagt-gaaaaata--aataaatgctgcattgatattctaaa 41091948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 21649427 - 21649517
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaa-aataataataaatgctgcatt 107  Q
    ||||||||  ||||| || |||||||||| ||| |||||||||||||||||| | |||| | ||||||| || || |||||||| ||||||    
T  21649427 ttattaatcatagttagttgagtagttaaattgaatgaaattcaataaataatgatataattgtggaaagaaaaaaaataaatggtgcatt 21649517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 35504937 - 35505007
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaa 88  Q
    |||||||||||||||  | || ||||||| || ||| |||||||||||||||| ||||| ||||| |||||    
T  35504937 ttattaattgtagttaatagaatagttaaattcgataaaattcaataaataagagtataatagtgaaaaaa 35505007  T

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Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 27870917 - 27870856
Alignment:
Q  16 ccttattaattgtagttggtggagtagtta-agttggatgaaattcaataaataagggtata 76  Q
    ||||||||||||||||| || || |||||| || ||| |||||| |||||||||||||||||    
T  27870917 ccttattaattgtagttagtagaatagttatagatggttgaaatgcaataaataagggtata 27870856  T

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Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 132
Target Start/End: Complemental strand, 36967389 - 36967311
Alignment:
Q  52 atgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaaacgacaattatttt 132  Q
    ||||||||||||||||||||||||| || ||  |||| ||||||||||  ||||||| |||| ||||   |||||||||||    
T  36967389 atgaaattcaataaataagggtataataatg--aaaaaaataataaattatgcattgatattctaaagtaacaattatttt 36967311  T

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Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 34057691 - 34057731
Alignment:
Q  25 ttgtagttggtggagtagttaagttggatgaaattcaataa 65  Q
    |||||||| ||| | ||||||||||||||||||||||||||    
T  34057691 ttgtagttagtgaaatagttaagttggatgaaattcaataa 34057731  T

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Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 40028552 - 40028481
Alignment:
Q  28 tagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatg 100  Q
    ||||| ||| |||| ||||||| |||||||||||||||| |||  |||| || |||||||| |||||||||||    
T  40028552 tagttagtgaagtaattaagttagatgaaattcaataaacaagaatataatactggaaaaa-aataataaatg 40028481  T

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Target: scaffold0328 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 8044 - 8160
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||  || ||| |||| |||||||||||||||||||||||| |    
T  8044 ccttattaattgtagttagtggagtaattaagttggatgaagttcaataaataagggtattataatgggaaaaaaataataaatgctgcattggtattct 8143  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  8144 aaagtgacaattatttt 8160  T

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Target: scaffold0159 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 34082 - 34196
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| ||| | |||||||||||||||||||||||||||||| |||||| ||||||||||  ||||||||||| ||||||| ||||||    
T  34082 ccttattaattgtagttagtgaaatagttaagttggatgaaattcaataaataatggtataatagtggaaaa--aataataaatgatgcattgatattgt 34179  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  34180 aaagtgacaattatttt 34196  T

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Target: scaffold0095 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 50254 - 50141
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    |||||||||  |||| |||||||| |||||||| |||||||| |||||||||||||||| |||| |||||||||||||||||||||||||| |||| |||    
T  50254 ttattaattacagttagtggagtaattaagttgaatgaaattaaataaataagggtataatagt-gaaaaataataataaatgctgcattgatattctaa 50156  T
Q  118 aacgacaattatttt 132  Q
    |  ||||||||||||    
T  50155 agtgacaattatttt 50141  T

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Target: scaffold0095; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 22398 - 22285
Alignment:
Q  18 ttattaattgtagttggtggagtagttaag-ttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgta 116  Q
    |||||||| || ||| ||| |||||||||  |||||| ||||||||||||||||| |||| |||||  |||| ||||||||||| || || |||||||||    
T  22398 ttattaatcgtggttagtgcagtagttaaaattggataaaattcaataaataaggatataatagtg--aaaaaaataataaatgttgtatcggtattgta 22301  T
Q  117 aaacgacaattatttt 132  Q
    ||  || |||||||||    
T  22300 aagtgataattatttt 22285  T

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Target: scaffold1809 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 749 - 861
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    ||||| ||||||||| |||||||  |||| ||||||||||||||||||||||||||||| ||||||||||  |||| | |||| |||| |||||||||||    
T  749 ttattgattgtagttagtggagtgtttaaattggatgaaattcaataaataagggtataatagtggaaaa--aatattcaatgttgcaatggtattgtaa 846  T
Q  118 aacgacaattatttt 132  Q
    |  ||||||||||||    
T  847 agtgacaattatttt 861  T

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Target: scaffold0330 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 5442 - 5329
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||| || |||||||  ||||||||||| || ||||| ||| |    
T  5442 ccttattaattttagttagtggagtagttaagttggatgaaattcaataaataaaggtata-taatggaaaa--aataataaatgttgtattggcattct 5346  T
Q  116 aaaacgacaattatttt 132  Q
    |||   |||||||||||    
T  5345 aaagtaacaattatttt 5329  T

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Target: scaffold0016 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 34 - 135
Target Start/End: Complemental strand, 76326 - 76226
Alignment:
Q  34 gtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaaaacgacaattatttta 133  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||  ||||| |||||||||| |||||||| |||| || |  |||||||||||||    
T  76326 gtggagtagttaagttagatgaaattcaataaataagggtataatagt-caaaaaaaataataaatactgcattgatattatagagtgacaattatttta 76228  T
Q  134 ag 135  Q
    ||    
T  76227 ag 76226  T

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Target: scaffold0182 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 20416 - 20500
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatg 100  Q
    |||||||||||| |||| ||| |||||||||||||||||||||||||||||| |||||||| ||  ||||||| | |||||||||    
T  20416 ccttattaattgcagttagtgaagtagttaagttggatgaaattcaataaatgagggtataataaaggaaaaaaattaataaatg 20500  T

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Target: scaffold0110 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 1753 - 1685
Alignment:
Q  19 tattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaa 87  Q
    |||||||||||||  |||||||||||||||||||| |||||||||||||||||||||| || |||||||    
T  1753 tattaattgtagtcagtggagtagttaagttggattaaattcaataaataagggtataataatggaaaa 1685  T

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Target: scaffold0003 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 252870 - 252981
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgtaa 117  Q
    ||||||||||||||   |||||||||||||||| ||||||||||||||||||| ||||| || ||  |||| ||||||||||| |||||||||||| |||    
T  252870 ttattaattgtagtat-tggagtagttaagttgaatgaaattcaataaataagagtataataatg--aaaaaaataataaatgttgcattggtattataa 252966  T
Q  118 aacgacaattatttt 132  Q
    |  ||||||| ||||    
T  252967 agtgacaattttttt 252981  T

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Target: scaffold0018 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 136100 - 136216
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||| ||||| ||| |||||||||||| ||||||||| ||||||||| |||||| |||| |||||  || || ||||| || |||| ||| ||    
T  136100 ccttattaattatagttagtgaagtagttaagtttgatgaaattaaataaataatggtataatagtagaaaagaaaaaaaaaatgttgtattgatatcgt 136199  T
Q  116 aaaacgacaattatttt 132  Q
    |||  ||||||||||||    
T  136200 aaagtgacaattatttt 136216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 105736 - 105676
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtata 76  Q
    ||||||||||||||||| ||| ||||||||||||| ||||||||| |||||||||||||||    
T  105736 ccttattaattgtagttagtgaagtagttaagttgaatgaaattcgataaataagggtata 105676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0583 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 2077 - 1961
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaataataataaatgctgcattggtattgt 115  Q
    ||||||||||||||||| ||||| || |||  || |||||||||||||||||||||||||| || ||| |||  ||||||||||||| ||||| | || |    
T  2077 ccttattaattgtagttagtggattaattacattcgatgaaattcaataaataagggtataataatggtaaa--aataataaatgcttcattgatgtttt 1980  T
Q  116 aaaacgacaattattttaa 134  Q
    |||  || |||||||||||    
T  1979 aaagtgataattattttaa 1961  T

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Target: scaffold0011 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 14233 - 14297
Alignment:
Q  18 ttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtg 82  Q
    ||||||||| |||||  |||||||||||| || ||||||||||||||||||| |||||| |||||    
T  14233 ttattaattatagttaatggagtagttaaatttgatgaaattcaataaataaaggtataatagtg 14297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 16149 - 16090
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtata 76  Q
    ||||||||||||||||  || || ||||||| ||||||||||||||||||||||| ||||    
T  16149 cttattaattgtagttaatgaagcagttaagatggatgaaattcaataaataaggatata 16090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 76
Target Start/End: Complemental strand, 143880 - 143842
Alignment:
Q  38 agtagttaagttggatgaaattcaataaataagggtata 76  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  143880 agtagttatgttggatgaaattaaataaataagggtata 143842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 6089 - 6041
Alignment:
Q  17 cttattaattgtagttggtggagtagttaagttggatgaaattcaataa 65  Q
    |||||||||| || || ||||||||||||| |||||| |||||||||||    
T  6089 cttattaattatacttagtggagtagttaatttggataaaattcaataa 6041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 17087 - 17015
Alignment:
Q  16 ccttattaattgtagttggtggagtagttaagttggatgaaattcaataaataagggtatagtagtggaaaaa 88  Q
    ||||||||||| |||||  ||| ||| ||| |||| ||||||||||||||||||   |||| |||||||||||    
T  17087 ccttattaattatagttaatggcgtaattacgttgaatgaaattcaataaataaaattataatagtggaaaaa 17015  T

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Target: scaffold0068 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 56708 - 56664
Alignment:
Q  21 ttaattgtagttggtggagtagttaagttggatgaaattcaataa 65  Q
    |||||||||||| ||||| || |||||||||| ||||||||||||    
T  56708 ttaattgtagttagtggaataattaagttggaagaaattcaataa 56664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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