View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8114_low_8 (Length: 228)

Name: NF8114_low_8
Description: NF8114
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8114_low_8
NF8114_low_8
[»] chr4 (56 HSPs)
chr4 (1-228)||(47464182-47464408)
chr4 (144-228)||(6643619-6643703)
chr4 (150-228)||(32884879-32884957)
chr4 (143-228)||(7061622-7061707)
chr4 (150-228)||(43237321-43237399)
chr4 (151-224)||(4972642-4972715)
chr4 (144-225)||(16821290-16821371)
chr4 (144-228)||(34360733-34360817)
chr4 (151-221)||(2942611-2942681)
chr4 (143-228)||(35311181-35311266)
chr4 (12-129)||(41621682-41621799)
chr4 (155-228)||(44536166-44536239)
chr4 (143-228)||(46396841-46396926)
chr4 (143-224)||(52869154-52869235)
chr4 (151-228)||(22130121-22130202)
chr4 (144-228)||(17237255-17237339)
chr4 (144-228)||(38405061-38405145)
chr4 (144-228)||(49428301-49428385)
chr4 (159-225)||(40122828-40122894)
chr4 (166-228)||(51625161-51625223)
chr4 (171-228)||(28500877-28500934)
chr4 (144-228)||(36985864-36985948)
chr4 (144-228)||(52247387-52247471)
chr4 (161-220)||(2066875-2066934)
chr4 (171-226)||(11288616-11288671)
chr4 (12-119)||(43352410-43352517)
chr4 (150-220)||(13016404-13016474)
chr4 (186-228)||(42517639-42517681)
chr4 (143-228)||(5841385-5841470)
chr4 (144-220)||(6609847-6609924)
chr4 (144-220)||(11907558-11907634)
chr4 (1-69)||(22630261-22630329)
chr4 (144-220)||(33790690-33790766)
chr4 (144-228)||(41711415-41711499)
chr4 (144-220)||(52859758-52859834)
chr4 (150-224)||(2653502-2653574)
chr4 (1-124)||(9646291-9646414)
chr4 (154-228)||(8175549-8175623)
chr4 (166-228)||(42616884-42616946)
chr4 (166-228)||(54506866-54506928)
chr4 (144-228)||(27880201-27880284)
chr4 (153-225)||(49747042-49747113)
chr4 (161-220)||(3689648-3689707)
chr4 (189-228)||(34321715-34321754)
chr4 (190-220)||(17114526-17114556)
chr4 (186-224)||(30192287-30192325)
chr4 (186-228)||(35380334-35380376)
chr4 (166-220)||(50263913-50263967)
chr4 (143-220)||(25141872-25141949)
chr4 (17-129)||(25852208-25852321)
chr4 (171-228)||(39397422-39397479)
chr4 (159-228)||(53346837-53346906)
chr4 (192-228)||(21325171-21325207)
chr4 (21-124)||(34835528-34835632)
chr4 (144-220)||(47772978-47773054)
chr4 (161-225)||(49175910-49175974)
[»] chr5 (35 HSPs)
chr5 (143-228)||(8698387-8698472)
chr5 (150-228)||(9515824-9515902)
chr5 (154-228)||(31655131-31655205)
chr5 (144-224)||(4818633-4818713)
chr5 (144-228)||(40530175-40530259)
chr5 (144-225)||(843518-843599)
chr5 (148-225)||(29570473-29570550)
chr5 (170-228)||(8724986-8725044)
chr5 (163-228)||(15818450-15818515)
chr5 (171-228)||(27542873-27542930)
chr5 (166-228)||(2232046-2232108)
chr5 (144-228)||(7827877-7827961)
chr5 (157-228)||(41496158-41496229)
chr5 (155-225)||(29374423-29374493)
chr5 (186-228)||(30512678-30512720)
chr5 (186-228)||(30553018-30553060)
chr5 (3-124)||(19145488-19145609)
chr5 (144-225)||(32440222-32440303)
chr5 (151-228)||(38508145-38508222)
chr5 (157-224)||(22848348-22848415)
chr5 (166-228)||(1248577-1248639)
chr5 (1-95)||(36895453-36895547)
chr5 (172-228)||(27580678-27580735)
chr5 (150-219)||(31747969-31748038)
chr5 (144-220)||(2588019-2588095)
chr5 (172-220)||(40900004-40900052)
chr5 (18-69)||(32061202-32061253)
chr5 (187-225)||(6315771-6315809)
chr5 (186-228)||(6615873-6615915)
chr5 (166-220)||(42922840-42922894)
chr5 (17-69)||(34310196-34310249)
chr5 (17-69)||(37495101-37495154)
chr5 (143-228)||(41478905-41478990)
chr5 (143-228)||(41492380-41492465)
chr5 (17-69)||(15931113-15931165)
[»] chr8 (42 HSPs)
chr8 (143-228)||(21216054-21216139)
chr8 (154-228)||(1739718-1739792)
chr8 (151-225)||(39405843-39405917)
chr8 (143-228)||(1875545-1875630)
chr8 (144-228)||(39482693-39482777)
chr8 (144-228)||(11976890-11976974)
chr8 (143-225)||(51193-51275)
chr8 (152-225)||(31082700-31082773)
chr8 (166-225)||(7172995-7173054)
chr8 (1-124)||(34639282-34639404)
chr8 (166-228)||(7703132-7703194)
chr8 (166-228)||(31271099-31271161)
chr8 (151-228)||(45425627-45425704)
chr8 (144-228)||(9300067-9300151)
chr8 (172-228)||(42972490-42972546)
chr8 (161-220)||(36967447-36967506)
chr8 (161-228)||(39300912-39300979)
chr8 (3-129)||(26168926-26169051)
chr8 (144-228)||(6611775-6611859)
chr8 (144-228)||(10179901-10179985)
chr8 (166-217)||(26626088-26626139)
chr8 (187-225)||(10953405-10953443)
chr8 (187-225)||(10961410-10961448)
chr8 (186-220)||(32678804-32678838)
chr8 (171-220)||(13335302-13335351)
chr8 (143-220)||(34393907-34393984)
chr8 (143-228)||(44761460-44761532)
chr8 (17-124)||(8387535-8387642)
chr8 (189-220)||(34948686-34948717)
chr8 (190-228)||(396611-396649)
chr8 (171-225)||(32476368-32476422)
chr8 (186-228)||(41092072-41092114)
chr8 (191-228)||(3117021-3117058)
chr8 (17-129)||(3734713-3734826)
chr8 (17-69)||(19471667-19471720)
chr8 (17-69)||(19542591-19542644)
chr8 (17-69)||(19590052-19590105)
chr8 (171-220)||(40996346-40996395)
chr8 (152-220)||(2767253-2767321)
chr8 (169-225)||(21649317-21649373)
chr8 (190-226)||(28072137-28072173)
chr8 (172-220)||(33765746-33765794)
[»] chr3 (45 HSPs)
chr3 (144-225)||(1778723-1778804)
chr3 (151-224)||(33491043-33491116)
chr3 (144-228)||(37312028-37312112)
chr3 (144-228)||(43253816-43253900)
chr3 (153-228)||(23004345-23004419)
chr3 (144-228)||(37695618-37695703)
chr3 (166-220)||(19823097-19823151)
chr3 (171-228)||(10366622-10366679)
chr3 (150-227)||(27471414-27471491)
chr3 (144-228)||(8679007-8679091)
chr3 (144-228)||(30190613-30190697)
chr3 (169-228)||(28690760-28690819)
chr3 (39-129)||(4252509-4252599)
chr3 (19-105)||(26158836-26158922)
chr3 (143-224)||(36460368-36460449)
chr3 (144-228)||(38795422-38795506)
chr3 (163-223)||(49447766-49447826)
chr3 (144-224)||(50035170-50035250)
chr3 (161-219)||(12736542-12736600)
chr3 (186-228)||(24569095-24569137)
chr3 (17-130)||(31537928-31538042)
chr3 (150-228)||(51064777-51064855)
chr3 (151-220)||(17652834-17652903)
chr3 (171-228)||(37772944-37773001)
chr3 (152-228)||(11632159-11632234)
chr3 (169-225)||(19611989-19612045)
chr3 (156-207)||(3313349-3313400)
chr3 (171-225)||(14194636-14194690)
chr3 (152-222)||(40462396-40462466)
chr3 (3-59)||(1242037-1242094)
chr3 (166-222)||(5322914-5322968)
chr3 (152-221)||(31158483-31158551)
chr3 (151-224)||(38137403-38137476)
chr3 (172-225)||(51837940-51837993)
chr3 (151-220)||(53560303-53560372)
chr3 (161-228)||(45811733-45811800)
chr3 (166-220)||(29023941-29023995)
chr3 (186-220)||(37497578-37497612)
chr3 (151-224)||(19609381-19609454)
chr3 (144-217)||(34957592-34957665)
chr3 (143-228)||(36476662-36476747)
chr3 (144-225)||(44301643-44301724)
chr3 (193-225)||(7757608-7757640)
chr3 (172-228)||(34750574-34750630)
chr3 (149-224)||(49830211-49830287)
[»] chr2 (37 HSPs)
chr2 (143-228)||(27501488-27501573)
chr2 (154-210)||(7438867-7438923)
chr2 (150-224)||(5789605-5789679)
chr2 (166-228)||(19937755-19937817)
chr2 (151-228)||(35313965-35314043)
chr2 (150-228)||(45235659-45235737)
chr2 (151-228)||(16377614-16377691)
chr2 (157-228)||(3323250-3323321)
chr2 (171-228)||(17695408-17695465)
chr2 (171-228)||(26607946-26608003)
chr2 (1-124)||(8192426-8192549)
chr2 (142-225)||(8947001-8947084)
chr2 (166-220)||(31448666-31448720)
chr2 (171-225)||(39691571-39691625)
chr2 (161-224)||(39443795-39443858)
chr2 (166-220)||(16805967-16806021)
chr2 (166-220)||(16845248-16845302)
chr2 (142-220)||(25637567-25637644)
chr2 (152-220)||(16463775-16463843)
chr2 (144-220)||(39785674-39785750)
chr2 (166-228)||(37322506-37322569)
chr2 (166-225)||(43115775-43115834)
chr2 (143-225)||(18853150-18853232)
chr2 (170-228)||(34225668-34225726)
chr2 (20-105)||(19525490-19525575)
chr2 (16-105)||(19605935-19606024)
chr2 (151-220)||(36354401-36354470)
chr2 (172-225)||(43410507-43410560)
chr2 (1-69)||(19174817-19174885)
chr2 (144-220)||(36794370-36794446)
chr2 (17-105)||(40591201-40591289)
chr2 (14-69)||(44976241-44976297)
chr2 (3-69)||(8258951-8259017)
chr2 (190-228)||(14523369-14523407)
chr2 (12-85)||(30943134-30943207)
chr2 (14-69)||(23787095-23787151)
chr2 (188-220)||(34120434-34120466)
[»] chr1 (51 HSPs)
chr1 (155-228)||(12039160-12039233)
chr1 (143-228)||(31042875-31042960)
chr1 (144-228)||(24991609-24991693)
chr1 (144-228)||(28749069-28749153)
chr1 (152-225)||(9307708-9307781)
chr1 (151-228)||(11449961-11450038)
chr1 (144-228)||(39864189-39864273)
chr1 (159-228)||(23168964-23169033)
chr1 (155-225)||(12151257-12151327)
chr1 (1-95)||(16539636-16539730)
chr1 (151-228)||(6023612-6023689)
chr1 (171-228)||(26093472-26093529)
chr1 (144-228)||(31978608-31978692)
chr1 (171-225)||(32970550-32970604)
chr1 (166-228)||(33733241-33733302)
chr1 (170-228)||(34031509-34031567)
chr1 (144-185)||(44742221-44742262)
chr1 (153-225)||(6267821-6267893)
chr1 (152-220)||(38787427-38787495)
chr1 (154-225)||(6160425-6160496)
chr1 (166-228)||(917102-917164)
chr1 (166-228)||(2572546-2572608)
chr1 (166-220)||(16395025-16395079)
chr1 (1-95)||(25237064-25237158)
chr1 (186-220)||(30754939-30754973)
chr1 (166-220)||(43500762-43500816)
chr1 (171-220)||(21909989-21910038)
chr1 (143-220)||(37506213-37506290)
chr1 (144-225)||(44707716-44707797)
chr1 (18-130)||(7197338-7197450)
chr1 (14-69)||(23734170-23734226)
chr1 (14-69)||(23741362-23741418)
chr1 (172-228)||(27687319-27687375)
chr1 (144-220)||(42410080-42410156)
chr1 (193-228)||(36701999-36702034)
chr1 (193-228)||(36718103-36718138)
chr1 (3-90)||(37047025-37047112)
chr1 (39-90)||(39964545-39964596)
chr1 (191-225)||(4659838-4659872)
chr1 (190-228)||(15444483-15444521)
chr1 (186-220)||(35367643-35367677)
chr1 (186-220)||(37276547-37276581)
chr1 (171-224)||(5179382-5179435)
chr1 (186-227)||(7759294-7759335)
chr1 (17-69)||(30677230-30677283)
chr1 (17-130)||(32729538-32729651)
chr1 (176-225)||(35682793-35682842)
chr1 (171-228)||(52429422-52429479)
chr1 (1-105)||(1138597-1138701)
chr1 (1-69)||(1486472-1486540)
chr1 (188-220)||(13579621-13579653)
[»] chr7 (54 HSPs)
chr7 (144-228)||(28103818-28103902)
chr7 (151-228)||(22738786-22738863)
chr7 (151-224)||(34100514-34100587)
chr7 (144-228)||(5524465-5524549)
chr7 (151-227)||(8592407-8592483)
chr7 (144-228)||(11373388-11373472)
chr7 (150-228)||(7457387-7457465)
chr7 (166-228)||(26974114-26974176)
chr7 (144-225)||(7463301-7463382)
chr7 (144-228)||(44180290-44180374)
chr7 (161-228)||(2459554-2459621)
chr7 (169-228)||(33819299-33819358)
chr7 (156-228)||(21350600-21350669)
chr7 (166-228)||(32346034-32346096)
chr7 (143-228)||(34947585-34947670)
chr7 (144-228)||(23670571-23670654)
chr7 (17-124)||(12211626-12211733)
chr7 (150-228)||(29835380-29835458)
chr7 (151-220)||(9786081-9786150)
chr7 (2-95)||(28647001-28647094)
chr7 (171-228)||(30866052-30866109)
chr7 (144-220)||(83478-83554)
chr7 (144-228)||(24516249-24516333)
chr7 (1-95)||(22696352-22696445)
chr7 (143-224)||(16904468-16904549)
chr7 (172-224)||(12631394-12631446)
chr7 (144-220)||(46211524-46211600)
chr7 (166-225)||(2850863-2850922)
chr7 (173-228)||(41506054-41506109)
chr7 (166-220)||(3178186-3178240)
chr7 (166-220)||(21759966-21760020)
chr7 (2-88)||(23330815-23330901)
chr7 (3-124)||(8435772-8435893)
chr7 (172-225)||(13962047-13962100)
chr7 (160-225)||(19271709-19271774)
chr7 (171-220)||(21390388-21390437)
chr7 (151-220)||(28202276-28202345)
chr7 (151-220)||(44424228-44424297)
chr7 (172-220)||(759079-759127)
chr7 (144-220)||(16560530-16560606)
chr7 (144-220)||(16605056-16605132)
chr7 (144-220)||(42935754-42935830)
chr7 (188-220)||(48608955-48608987)
chr7 (151-206)||(34635958-34636013)
chr7 (161-220)||(40076408-40076467)
chr7 (1-47)||(35476421-35476467)
chr7 (17-129)||(2751269-2751382)
chr7 (17-69)||(21217923-21217976)
chr7 (171-220)||(38391841-38391890)
chr7 (17-124)||(21835154-21835262)
chr7 (184-224)||(32018712-32018752)
chr7 (184-220)||(32018915-32018951)
chr7 (143-207)||(36790852-36790916)
chr7 (172-220)||(49101759-49101807)
[»] scaffold0095 (1 HSPs)
scaffold0095 (151-225)||(50285-50359)
[»] chr6 (27 HSPs)
chr6 (143-228)||(23142745-23142830)
chr6 (152-224)||(3720201-3720273)
chr6 (144-228)||(31894162-31894246)
chr6 (142-228)||(15058195-15058281)
chr6 (172-228)||(13909502-13909558)
chr6 (151-227)||(34639411-34639487)
chr6 (153-224)||(181638-181708)
chr6 (161-228)||(3291737-3291804)
chr6 (2-128)||(10377710-10377836)
chr6 (186-228)||(13087608-13087650)
chr6 (150-220)||(27448114-27448184)
chr6 (143-228)||(1781880-1781965)
chr6 (171-228)||(7920316-7920373)
chr6 (17-129)||(9208246-9208358)
chr6 (144-220)||(11655898-11655974)
chr6 (144-220)||(29363392-29363468)
chr6 (144-220)||(32440597-32440673)
chr6 (161-220)||(21010263-21010322)
chr6 (144-220)||(27367392-27367464)
chr6 (144-220)||(27457739-27457811)
chr6 (17-95)||(17149547-17149625)
chr6 (171-228)||(7072238-7072295)
chr6 (17-129)||(15360188-15360301)
chr6 (187-228)||(24983444-24983485)
chr6 (193-225)||(1063604-1063636)
chr6 (144-220)||(6834321-6834397)
chr6 (200-228)||(15582361-15582389)
[»] scaffold0302 (1 HSPs)
scaffold0302 (150-225)||(16179-16254)
[»] scaffold0159 (1 HSPs)
scaffold0159 (150-224)||(33978-34052)
[»] scaffold0294 (1 HSPs)
scaffold0294 (159-228)||(17113-17182)
[»] scaffold0018 (1 HSPs)
scaffold0018 (143-228)||(135989-136074)
[»] scaffold0003 (2 HSPs)
scaffold0003 (166-228)||(252504-252566)
scaffold0003 (150-220)||(39174-39244)
[»] scaffold0470 (1 HSPs)
scaffold0470 (144-228)||(1063-1147)
[»] scaffold0024 (1 HSPs)
scaffold0024 (146-202)||(84368-84424)
[»] scaffold0583 (1 HSPs)
scaffold0583 (144-225)||(2106-2187)
[»] scaffold0012 (1 HSPs)
scaffold0012 (188-228)||(105762-105802)
[»] scaffold0001 (1 HSPs)
scaffold0001 (144-228)||(143908-143988)
[»] scaffold0188 (1 HSPs)
scaffold0188 (167-225)||(6818-6876)
[»] scaffold0020 (1 HSPs)
scaffold0020 (21-71)||(123146-123196)
[»] scaffold0576 (1 HSPs)
scaffold0576 (17-129)||(5172-5285)
[»] scaffold0464 (1 HSPs)
scaffold0464 (166-219)||(6260-6313)
[»] scaffold0330 (1 HSPs)
scaffold0330 (171-228)||(5468-5525)
[»] scaffold0160 (1 HSPs)
scaffold0160 (2-59)||(29218-29275)
[»] scaffold1391 (1 HSPs)
scaffold1391 (144-220)||(1770-1846)


Alignment Details
Target: chr4 (Bit Score: 139; Significance: 7e-73; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 47464182 - 47464408
Alignment:
Q  1 ctaagccagaacaaaactctgtatggacttaccctccaaaattggcatcagagggaatcaaacatgagatcgtgataggagcacactccacgatcttaag 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||| ||||| |||    
T  47464182 ctaagccataacaaaactctgtatggacttaccctccaaaattggcatcagagggaatcaaacatgagatcttgatataagcacactccatgatctaaag 47464281  T
Q  101 ccaacgagtagaccaaccctaaattggtttnnnnnnncgaagttactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaa 200  Q
    ||||| || |||||||||  ||||||| ||        ||||||||||||||  ||||||||||||||| |||||||||||||| |||||||||||||||    
T  47464282 ccaaccagaagaccaacctcaaattgg-ttaaaaaaaagaagttactctctctatctcacaatattagtcgtttaaggtttgagcacgattattaaggaa 47464380  T
Q  201 atgattaattgtgttgatttcaatggta 228  Q
    ||||||||||||||||||||||||||||    
T  47464381 atgattaattgtgttgatttcaatggta 47464408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 144 - 228
Target Start/End: Original strand, 6643619 - 6643703
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||| |||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6643619 tactcactccgtctcacaatattagtagtttaatgtttgagcacgattattaaggaaatgattaattgtgttgatttcaatggta 6643703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 150 - 228
Target Start/End: Complemental strand, 32884957 - 32884879
Alignment:
Q  150 ctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||    
T  32884957 ctccgtctcacaatattagtcgtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggta 32884879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 143 - 228
Target Start/End: Original strand, 7061622 - 7061707
Alignment:
Q  143 ttactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||| ||| |||||||||||||||| ||||||||||||   |||||||||||||||||||||||||||||||||||||||||||    
T  7061622 ttactccctctgtctcacaatattagtcgtttaaggtttgtacacgattattaaggaaatgattaattgtgttgatttcaatggta 7061707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 150 - 228
Target Start/End: Complemental strand, 43237399 - 43237321
Alignment:
Q  150 ctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||||||||||||||||| |||||||||||  | |||||||||||||||||||||||||||||| ||||||||||||    
T  43237399 ctccgtctcacaatattagtcgtttaaggtttatgcacgattattaaggaaatgattaattgtgtttatttcaatggta 43237321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 4972715 - 4972642
Alignment:
Q  151 tccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaat 224  Q
    ||||||||||||||||||| ||||||| |||| | ||||||||||| |||||||||||||||||||||||||||    
T  4972715 tccgtctcacaatattagtcgtttaagatttgtgcacgattattaatgaaatgattaattgtgttgatttcaat 4972642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 16821290 - 16821371
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatg 225  Q
    ||||| ||||||||||||| |||||| |||||||||||| | ||||||||||| | ||||||||||||||||||||||||||    
T  16821290 tactccctccgtctcacaaaattagtcgtttaaggtttgtgcacgattattaatgcaatgattaattgtgttgatttcaatg 16821371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 144 - 228
Target Start/End: Complemental strand, 34360817 - 34360733
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||| |||||||||||||||||| | |||||| ||||| | ||||||||||| ||||||||||||||| |||||||||||||||    
T  34360817 tactccctccgtctcacaatattaatcgtttaaagtttgtgcacgattattaaagaaatgattaattgtattgatttcaatggta 34360733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 151 - 221
Target Start/End: Original strand, 2942611 - 2942681
Alignment:
Q  151 tccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttc 221  Q
    ||||||||||||||||||| ||||||||||||  || ||||||||| ||||||||||||||||||||||||    
T  2942611 tccgtctcacaatattagtcgtttaaggtttgtataagattattaaagaaatgattaattgtgttgatttc 2942681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 143 - 228
Target Start/End: Original strand, 35311181 - 35311266
Alignment:
Q  143 ttactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||| |||||||| |||||||||   |||||||||||| | ||||||||||||||||||||||||| |||| ||||||||||||    
T  35311181 ttactccctccgtcttacaatattaagcgtttaaggtttgtgcacgattattaaggaaatgattaattatgttaatttcaatggta 35311266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 12 - 129
Target Start/End: Original strand, 41621682 - 41621799
Alignment:
Q  12 caaaactctgtatggacttaccctccaaaattggcatcagagggaatcaaacatgagatcgtgataggagcacactccacgatcttaagccaacgagtag 111  Q
    |||| ||||||||||| || ||| |||||||||||| |||||| |||||||||||||| | ||| ||||||| |||||| ||||| |||||||| | |||    
T  41621682 caaagctctgtatggatttgcccaccaaaattggcaccagaggaaatcaaacatgagaccttgagaggagcaaactccaagatctcaagccaaccattag 41621781  T
Q  112 accaaccctaaattggtt 129  Q
     ||||||| |||| ||||    
T  41621782 gccaaccccaaatgggtt 41621799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 155 - 228
Target Start/End: Original strand, 44536166 - 44536239
Alignment:
Q  155 tctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||||||||||| |||||||| ||||  | ||||||||||||||||||||||||||||||||||| |||||||    
T  44536166 tctcacaatattaattgtttaaagtttatgcacgattattaaggaaatgattaattgtgttgattttaatggta 44536239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 143 - 228
Target Start/End: Original strand, 46396841 - 46396926
Alignment:
Q  143 ttactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||| || |||||||||||||| |  |||||||||||| | ||||| |||||| ||||||||||||||||||||||||||||||    
T  46396841 ttactcccttcgtctcacaatatttgccgtttaaggtttgtgcacgatcattaagtaaatgattaattgtgttgatttcaatggta 46396926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 143 - 224
Target Start/End: Complemental strand, 52869235 - 52869154
Alignment:
Q  143 ttactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaat 224  Q
    |||||| || ||||||||| ||||||| |||||||||||| | || |||||||||||||| |||||||||||||||||||||    
T  52869235 ttactcacttcgtctcacattattagtcgtttaaggtttgtgcacaattattaaggaaataattaattgtgttgatttcaat 52869154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 151 - 228
Target Start/End: Complemental strand, 22130202 - 22130121
Alignment:
Q  151 tccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaat----tgtgttgatttcaatggta 228  Q
    ||||||||||||||||||| |||||||||||| | ||| ||||||||||||||||||||    |||||||||||||||||||    
T  22130202 tccgtctcacaatattagtcgtttaaggtttgtgcacggttattaaggaaatgattaattgtatgtgttgatttcaatggta 22130121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 144 - 228
Target Start/End: Original strand, 17237255 - 17237339
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||| ||||||||||||||| ||||  ||||||||||| | | |||||||||| |||| |||||||||||||||| ||||||||    
T  17237255 tactccctccgtctcacaatactagtcatttaaggtttgtgcatgattattaagaaaataattaattgtgttgattgcaatggta 17237339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 144 - 228
Target Start/End: Original strand, 38405061 - 38405145
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||| |||||||||  |||  |||| |||||||||||| | ||||||||||||||||||||||||| ||||||||| |||||||    
T  38405061 tactccctccgtctctaaattatagtcgtttaaggtttgtgcacgattattaaggaaatgattaattctgttgatttaaatggta 38405145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 144 - 228
Target Start/End: Original strand, 49428301 - 49428385
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||| |||||||||  |||  |||| |||||||||||  | |||||||||||||||||||||| ||||||||||||||||||||    
T  49428301 tactccctccgtctctaaattatagtcgtttaaggtttttgcacgattattaaggaaatgattatttgtgttgatttcaatggta 49428385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 40122828 - 40122894
Alignment:
Q  159 acaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatg 225  Q
    ||||||||||| ||||||| |||| | |||||||||||||||||||||||||| |||||||| ||||    
T  40122828 acaatattagtcgtttaagctttgtgcacgattattaaggaaatgattaattgcgttgattttaatg 40122894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 228
Target Start/End: Complemental strand, 51625223 - 51625161
Alignment:
Q  166 tagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||| |||||| ||||| | |||||||||||| ||||||||||||||||||||||||||||||    
T  51625223 tagtcgtttaaagtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggta 51625161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 28500877 - 28500934
Alignment:
Q  171 gtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||| ||||| | ||||||||||||||||||||| |||||||||||||||||||||    
T  28500877 gtttaatgtttgtgcacgattattaaggaaatgattgattgtgttgatttcaatggta 28500934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 228
Target Start/End: Complemental strand, 36985948 - 36985864
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||| |||||||||| |||| || | ||||||| |||   ||||||| || |||||||||||||||||||||||||||||||||    
T  36985948 tactccctccgtctcaaaataatactcgtttaagatttttatacgatttttcaggaaatgattaattgtgttgatttcaatggta 36985864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 228
Target Start/End: Original strand, 52247387 - 52247471
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||| |||||||||  |||  |||| |||||||| ||| | |||||||||||| ||||||||||||||||| ||||||||||||    
T  52247387 tactccctccgtctctaaattatagtcgtttaaggattgtgcacgattattaagaaaatgattaattgtgttaatttcaatggta 52247471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 2066934 - 2066875
Alignment:
Q  161 aatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    |||| |||| |||||||||||  | |||||||||||||||||||||||||||||||||||    
T  2066934 aataatagtcgtttaaggtttatgcacgattattaaggaaatgattaattgtgttgattt 2066875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 171 - 226
Target Start/End: Original strand, 11288616 - 11288671
Alignment:
Q  171 gtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatgg 226  Q
    |||||||||||  |||||||||||||| |||||||||||||| |||||||||||||    
T  11288616 gtttaaggtttatgtacgattattaagaaaatgattaattgtattgatttcaatgg 11288671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 12 - 119
Target Start/End: Original strand, 43352410 - 43352517
Alignment:
Q  12 caaaactctgtatggacttaccctccaaaattggcatcagagggaatcaaacatgagatcgtgataggagcacactccacgatcttaagccaacgagtag 111  Q
    ||||||| ||||||||||| | |||||| |||| || ||||| ||||| ||| |||| || ||| ||||||| |||||| ||||| |||||||| | |||    
T  43352410 caaaactttgtatggacttgcactccaagattgacaccagagagaatcgaacctgagttcttgagaggagcaaactccatgatctcaagccaaccattag 43352509  T
Q  112 accaaccc 119  Q
    ||||||||    
T  43352510 accaaccc 43352517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 150 - 220
Target Start/End: Complemental strand, 13016474 - 13016404
Alignment:
Q  150 ctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    |||||||||| |||| ||||||||||||||||||| ||  || ||||||||||||||||||  ||||||||    
T  13016474 ctccgtctcagaataatagttgtttaaggtttgagcacagtttttaaggaaatgattaatttggttgattt 13016404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 228
Target Start/End: Original strand, 42517639 - 42517681
Alignment:
Q  186 acgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  42517639 acgattattaagaaaatgattaattgtgttgatttcaatggta 42517681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 228
Target Start/End: Original strand, 5841385 - 5841470
Alignment:
Q  143 ttactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||||||||||||||  |||  |||| |||||||||||| | || | |||||||||||||||| |||| |||||||| |||||||    
T  5841385 ttactctctccgtctctaaattatagtcgtttaaggtttgtgcacaactattaaggaaatgattgattgcgttgattttaatggta 5841470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 220
Target Start/End: Complemental strand, 6609924 - 6609847
Alignment:
Q  144 tactctctccgtctcacaatattagtt-gtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    ||||| |||||||||  |||| ||||| |||||| ||||  | |||||||||||||||||||||||||||||||||||    
T  6609924 tactccctccgtctctaaataatagttcgtttaaagtttatgcacgattattaaggaaatgattaattgtgttgattt 6609847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 220
Target Start/End: Original strand, 11907558 - 11907634
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    ||||| |||||||||  |||| ||||  |||||||||   | |||||||||||||||||||||||||||||||||||    
T  11907558 tactccctccgtctctaaataatagtcatttaaggttaatgcacgattattaaggaaatgattaattgtgttgattt 11907634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 22630261 - 22630329
Alignment:
Q  1 ctaagccagaacaaaactctgtatggacttaccctccaaaattggcatcagagggaatcaaacatgaga 69  Q
    |||||||| | ||||||| ||||||||||| ||| |||||||||||| ||||||||||| ||| |||||    
T  22630261 ctaagccaaagcaaaactttgtatggacttgcccaccaaaattggcaccagagggaatcgaacctgaga 22630329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 220
Target Start/End: Original strand, 33790690 - 33790766
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    ||||| || ||||||  |||| |||| |||||||||||  | |||||||||||| ||||||||||||||||||||||    
T  33790690 tactcccttcgtctctaaataatagtcgtttaaggtttatgcacgattattaagaaaatgattaattgtgttgattt 33790766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 228
Target Start/End: Original strand, 41711415 - 41711499
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||||||  ||||| || | ||||||||||||||||| | || ||| ||| |||||||||||||| ||||||||| |||||||    
T  41711415 tactctctcaatctcaaaacaatagttgtttaaggtttgtgcacaatttttatggaaatgattaattatgttgattttaatggta 41711499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 220
Target Start/End: Original strand, 52859758 - 52859834
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    ||||| |||||||||  |||| |||| | |||||| ||  | |||||||||||||||||||||||||||||||||||    
T  52859758 tactccctccgtctctaaataatagtcgcttaaggcttatgcacgattattaaggaaatgattaattgtgttgattt 52859834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 224
Target Start/End: Complemental strand, 2653574 - 2653502
Alignment:
Q  150 ctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaat 224  Q
    |||||||||  |||| |||||||||||| |||| | | |||||||||  ||||||||||||||||||||||||||    
T  2653574 ctccgtctctaaataatagttgtttaagatttgtgcatgattattaa--aaatgattaattgtgttgatttcaat 2653502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 9646291 - 9646414
Alignment:
Q  1 ctaagccagaacaaaactctgtatggacttaccctccaaaattggcatcagagggaatcaaacatgagatcgtgataggagcacactccacgatcttaag 100  Q
    |||||||||| |||| | ||||||| |||| |||    |||||| |||||||| ||||||||||||||| | ||| |||||||||||| | ||||  ||     
T  9646291 ctaagccagagcaaagcactgtatgaacttgcccattgaaattgtcatcagagagaatcaaacatgagaccttgacaggagcacactcaaagatcccaaa 9646390  T
Q  101 ccaacgagtagaccaaccctaaat 124  Q
    ||||| | ||||||||||| ||||    
T  9646391 ccaaccactagaccaaccccaaat 9646414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 154 - 228
Target Start/End: Original strand, 8175549 - 8175623
Alignment:
Q  154 gtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||| |||| |||||||||| || ||| | | |||||||||  |||||| |||||||||||||||||||||||    
T  8175549 gtctcaaaataatagttgtttatggcttgtgcatgattattaaaaaaatgaataattgtgttgatttcaatggta 8175623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 228
Target Start/End: Original strand, 42616884 - 42616946
Alignment:
Q  166 tagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||| ||||||| |||| | | ||||||||| ||||||||||| |||||||||||||||||||    
T  42616884 tagtcgtttaagttttgtgcatgattattaaagaaatgattaactgtgttgatttcaatggta 42616946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 228
Target Start/End: Complemental strand, 54506928 - 54506866
Alignment:
Q  166 tagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||| ||||||| ||||  |||| |||||||| |||||||||| |||||||||||||||||||    
T  54506928 tagtcgtttaagatttgtttacggttattaagaaaatgattaactgtgttgatttcaatggta 54506866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 228
Target Start/End: Original strand, 27880201 - 27880284
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||||||| || ||| |||| |||| ||||||||||||  || |||| ||||  ||||||||| ||||||||||||||||||||    
T  27880201 tactctctctgtttcaaaataatagtcgtttaaggtttgtatatgatttttaaataaatgatta-ttgtgttgatttcaatggta 27880284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 225
Target Start/End: Complemental strand, 49747113 - 49747042
Alignment:
Q  153 cgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatg 225  Q
    |||||||||||||||||  || |||| ||| | |||||||||||  |||| ||||||||||||||||||||||    
T  49747113 cgtctcacaatattagtcattcaaggcttgtgcacgattattaaa-aaataattaattgtgttgatttcaatg 49747042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 3689707 - 3689648
Alignment:
Q  161 aatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    |||| |||| |||||||||||  ||||| ||||||| ||||||||||||||| |||||||    
T  3689707 aataatagtcgtttaaggtttatgtacggttattaaagaaatgattaattgtattgattt 3689648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 228
Target Start/End: Original strand, 34321715 - 34321754
Alignment:
Q  189 attattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||||||| |||||||||||||||||||||| |||||||    
T  34321715 attattaagaaaatgattaattgtgttgattttaatggta 34321754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 220
Target Start/End: Complemental strand, 17114556 - 17114526
Alignment:
Q  190 ttattaaggaaatgattaattgtgttgattt 220  Q
    |||||||||||||||||||||||||||||||    
T  17114556 ttattaaggaaatgattaattgtgttgattt 17114526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 30192325 - 30192287
Alignment:
Q  186 acgattattaaggaaatgattaattgtgttgatttcaat 224  Q
    |||||| ||||| ||||||||||||||||||||||||||    
T  30192325 acgatttttaagaaaatgattaattgtgttgatttcaat 30192287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 228
Target Start/End: Original strand, 35380334 - 35380376
Alignment:
Q  186 acgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||||||||| |||||||||||| ||||||||| |||||||    
T  35380334 acgattattaagaaaatgattaattatgttgattttaatggta 35380376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 50263913 - 50263967
Alignment:
Q  166 tagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    |||| |||||||||||| | |||||||||||| |||||||| | |||||||||||    
T  50263913 tagtcgtttaaggtttgtgcacgattattaagaaaatgattcactgtgttgattt 50263967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 25141872 - 25141949
Alignment:
Q  143 ttactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    ||||||| | ||||| | |||| |||| |||||||||||   ||||||| ||||| |||||||||| |||||||||||    
T  25141872 ttactcttttcgtcttaaaataatagtcgtttaaggtttatatacgatttttaagaaaatgattaaatgtgttgattt 25141949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 129
Target Start/End: Complemental strand, 25852321 - 25852208
Alignment:
Q  17 ctctgtatggactta-ccctccaaaattggcatcagagggaatcaaacatgagatcgtgataggagcacactccacgatcttaagccaacgagtagacca 115  Q
    ||||||||||||||| ||| || ||||||||| ||||||||||| ||| ||||| | |   ||||||| |||||| ||||  |||||||| | ||| |||    
T  25852321 ctctgtatggacttagcccaccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggcca 25852222  T
Q  116 accctaaattggtt 129  Q
    |||| |||| ||||    
T  25852221 accccaaatgggtt 25852208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 39397479 - 39397422
Alignment:
Q  171 gtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||| ||||| | |||||  |||||||||||||||||| ||||||||||| |||||    
T  39397479 gtttaaagtttgtgcacgatgtttaaggaaatgattaattatgttgatttcattggta 39397422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 228
Target Start/End: Complemental strand, 53346906 - 53346837
Alignment:
Q  159 acaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||||||||| ||||||  |||| | |||||||||||| |||| ||| ||||||||  |||||||||||    
T  53346906 acaatattagtcgtttaaaatttgtgcacgattattaagaaaataattgattgtgttagtttcaatggta 53346837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 228
Target Start/End: Original strand, 21325171 - 21325207
Alignment:
Q  192 attaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  21325171 attaaggaaatgataaattgtgtttatttcaatggta 21325207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 34835632 - 34835528
Alignment:
Q  21 gtatggactta-ccctccaaaattggcatcagagggaatcaaacatgagatcgtgataggagcacactccacgatcttaagccaacgagtagaccaaccc 119  Q
    ||||||||||| ||| || |||||| || ||||||||||| ||||||||| | | | ||||||| |||| | ||||  |||||||| | |||||||||||    
T  34835632 gtatggacttagcccaccgaaattgacaccagagggaatcgaacatgagaccttaagaggagcaaactctaagatcccaagccaaccactagaccaaccc 34835533  T
Q  120 taaat 124  Q
     ||||    
T  34835532 caaat 34835528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 220
Target Start/End: Original strand, 47772978 - 47773054
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    ||||| |||||||||  |||| |||| ||||||||||   | ||  ||||||||||||| |||||||||||||||||    
T  47772978 tactccctccgtctctaaataatagtcgtttaaggttgatgcacagttattaaggaaataattaattgtgttgattt 47773054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 225
Target Start/End: Original strand, 49175910 - 49175974
Alignment:
Q  161 aatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatg 225  Q
    |||| |||| |||||||||||| | | |||| ||||| |||||||||||||||  ||||||||||    
T  49175910 aataatagtcgtttaaggtttgtgcatgatttttaagaaaatgattaattgtggagatttcaatg 49175974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 3e-29; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 8698472 - 8698387
Alignment:
Q  143 ttactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||| ||||||||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||||    
T  8698472 ttactccctccgtctcacaatatttgttgtttaaggtttgtgcacgattattaaagaaatgattaattgtgttgatttcaatggta 8698387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 150 - 228
Target Start/End: Complemental strand, 9515902 - 9515824
Alignment:
Q  150 ctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||||||||||||||||| |||||||||||| | ||||||||||||  |||||||||||||||||||||||||||||    
T  9515902 ctccgtctcacaatattagtcgtttaaggtttgtgcacgattattaagataatgattaattgtgttgatttcaatggta 9515824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 154 - 228
Target Start/End: Complemental strand, 31655205 - 31655131
Alignment:
Q  154 gtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||||||||||||| |||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  31655205 gtctcacaatattagtcgtttaaagtttgtgtacgattattaaagaaatgattaattgtgttgatttcaatggta 31655131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 144 - 224
Target Start/End: Complemental strand, 4818713 - 4818633
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaat 224  Q
    ||||| ||||||||||||||||| || |||||||||||| | ||||||||||||||||| |||||||||||||||||||||    
T  4818713 tactccctccgtctcacaatatttgtcgtttaaggtttgtgcacgattattaaggaaataattaattgtgttgatttcaat 4818633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 144 - 228
Target Start/End: Original strand, 40530175 - 40530259
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||| ||||||||||||||||| || ||||||||| || | |||||||||||| ||||||||||||||||||||||||||||||    
T  40530175 tactccctccgtctcacaatatttgtcgtttaaggtctgtgcacgattattaagaaaatgattaattgtgttgatttcaatggta 40530259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 843599 - 843518
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatg 225  Q
    ||||| ||||||||||||||| || |||||||||||||| | |||||||||||| |||||||||||| ||||||||||||||    
T  843599 tactccctccgtctcacaataataattgtttaaggtttgtgcacgattattaagaaaatgattaattttgttgatttcaatg 843518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 148 - 225
Target Start/End: Complemental strand, 29570550 - 29570473
Alignment:
Q  148 ctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatg 225  Q
    |||||| ||||||||||||||| ||||||| |||| | ||||||||||| ||||||||||||||||||||||| ||||    
T  29570550 ctctccatctcacaatattagtcgtttaagatttgtgcacgattattaaagaaatgattaattgtgttgattttaatg 29570473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 170 - 228
Target Start/End: Original strand, 8724986 - 8725044
Alignment:
Q  170 tgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||||    
T  8724986 tgtttaaggtttgtgcacgattattaaagaaatgattaattgtgttgatttcaatggta 8725044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 15818450 - 15818515
Alignment:
Q  163 tattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||||| |||||||||||  | |||||||||||||||||| ||||||||||||||||||||||||    
T  15818450 tattagtcgtttaaggtttatgcacgattattaaggaaatgtttaattgtgttgatttcaatggta 15818515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 27542930 - 27542873
Alignment:
Q  171 gtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||    
T  27542930 gtttaaggtttgtgcacgattattaaggaaatgattgattgtgttgatttcaatggta 27542873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 228
Target Start/End: Original strand, 2232046 - 2232108
Alignment:
Q  166 tagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||| |||||||||||| | |||||||||||| |||||| |||||||||||||||||||||||    
T  2232046 tagtcgtttaaggtttgtgcacgattattaagaaaatgaataattgtgttgatttcaatggta 2232108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 228
Target Start/End: Original strand, 7827877 - 7827961
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||| |||||||||  |||| || | ||||||||||||   |||||||||||| |||| |||||||||||||||||||||||||    
T  7827877 tactccctccgtctctaaataataatcgtttaaggtttgtacacgattattaagaaaataattaattgtgttgatttcaatggta 7827961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 41496229 - 41496158
Alignment:
Q  157 tcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||||||||||| | ||||||||||   |||||||||||  |||| |||||||||||||||||||||||||    
T  41496229 tcacaatattagtcgattaaggtttgtacacgattattaaaaaaataattaattgtgttgatttcaatggta 41496158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 225
Target Start/End: Complemental strand, 29374493 - 29374423
Alignment:
Q  155 tctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatg 225  Q
    ||||||||||||||| |||||||||||   || | |||||||| |||||||||||| ||||||||||||||    
T  29374493 tctcacaatattagtcgtttaaggtttatttaaggttattaagaaaatgattaattatgttgatttcaatg 29374423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 228
Target Start/End: Original strand, 30512678 - 30512720
Alignment:
Q  186 acgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  30512678 acgattattaaggaaatgattaattgtattgatttcaatggta 30512720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 228
Target Start/End: Original strand, 30553018 - 30553060
Alignment:
Q  186 acgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  30553018 acgattattaaggaaatgattaattgtattgatttcaatggta 30553060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 124
Target Start/End: Original strand, 19145488 - 19145609
Alignment:
Q  3 aagccagaacaaaactctgtatggacttaccctccaaaattggcatcagagggaatcaaacatgagatcgtgataggagcacactccacgatcttaagcc 102  Q
    |||||||| |||| |||||||||||||| ||| || ||||||||| ||||||||||| |||  |||| | ||| ||||||| |||||| ||||  ||| |    
T  19145488 aagccagagcaaagctctgtatggacttgcccaccgaaattggcaccagagggaatcgaaccggagaccttgagaggagcatactccaagatcccaagtc 19145587  T
Q  103 aacgagtagaccaaccctaaat 124  Q
    ||| | ||| ||||||| ||||    
T  19145588 aaccactaggccaaccccaaat 19145609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 32440303 - 32440222
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatg 225  Q
    ||||| |||||||||| |||| |||| ||| |||||||| | | |||| |||| |||||||||||||||||| |||||||||    
T  32440303 tactccctccgtctcaaaataatagtcgttaaaggtttgtgcatgatttttaaagaaatgattaattgtgttaatttcaatg 32440222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 228
Target Start/End: Original strand, 38508145 - 38508222
Alignment:
Q  151 tccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||||||| |||| |||| ||||||| |||| |  ||||| ||||| ||||||||||||||||| ||||||||||||    
T  38508145 tccgtctcaaaataatagtcgtttaagatttgtgctcgatttttaagaaaatgattaattgtgttaatttcaatggta 38508222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 22848348 - 22848415
Alignment:
Q  157 tcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaat 224  Q
    ||||||||||||| |||||||| |||   | |||||||||||||  ||||||||||||||||||||||    
T  22848348 tcacaatattagtcgtttaaggcttgtacaagattattaaggaagcgattaattgtgttgatttcaat 22848415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 228
Target Start/End: Original strand, 1248577 - 1248639
Alignment:
Q  166 tagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||| ||||||| |||| | ||| ||||||||||||| ||||||| |||||||||||||||||    
T  1248577 tagtcgtttaagatttgtgcacggttattaaggaaattattaattatgttgatttcaatggta 1248639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 36895547 - 36895453
Alignment:
Q  1 ctaagccagaacaaaactctgtatggacttaccctccaaaattggcatcagagggaatcaaacatgagatcgtgataggagcacactccacgatc 95  Q
    |||||||||| |||| || |||||||||||  || || ||||||| | ||||||||||| ||||||| | | ||| |||||||||||||| ||||    
T  36895547 ctaagccagagcaaagctttgtatggacttgaccaccgaaattggtaccagagggaatcgaacatgaaaccttgagaggagcacactccaagatc 36895453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 27580735 - 27580678
Alignment:
Q  172 tttaaggtttgagtacgatta-ttaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||||||||  | ||||||| || |||||||||||||||||||||||||||||||||    
T  27580735 tttaaggtttctgcacgattaatttaggaaatgattaattgtgttgatttcaatggta 27580678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 31748038 - 31747969
Alignment:
Q  150 ctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatt 219  Q
    |||||||||||||||||| | ||||||| |||  |    |||||||||||||||||||||||||||||||    
T  31748038 ctccgtctcacaatattattcgtttaagatttatgcgtcattattaaggaaatgattaattgtgttgatt 31747969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 220
Target Start/End: Original strand, 2588019 - 2588095
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    ||||| |||||||||  |||| |||| ||||||||||   | ||  |||||||||||||||||||||||||||||||    
T  2588019 tactccctccgtctctaaataatagtcgtttaaggttgatgcacagttattaaggaaatgattaattgtgttgattt 2588095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 40900052 - 40900004
Alignment:
Q  172 tttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    ||||||||||  | ||| |||||||||||||||||||||||||||||||    
T  40900052 tttaaggtttatgcacggttattaaggaaatgattaattgtgttgattt 40900004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 32061202 - 32061253
Alignment:
Q  18 tctgtatggacttaccctccaaaattggcatcagagggaatcaaacatgaga 69  Q
    ||||||||||||  ||| |||||| ||||||||||||||||||||| |||||    
T  32061202 tctgtatggactagcccaccaaaactggcatcagagggaatcaaacctgaga 32061253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 225
Target Start/End: Original strand, 6315771 - 6315809
Alignment:
Q  187 cgattattaaggaaatgattaattgtgttgatttcaatg 225  Q
    |||||||||||||||||||| |||||||| |||||||||    
T  6315771 cgattattaaggaaatgattgattgtgttaatttcaatg 6315809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 228
Target Start/End: Original strand, 6615873 - 6615915
Alignment:
Q  186 acgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||||||||  |||| |||||||||||||||||||||||||    
T  6615873 acgattattaaataaataattaattgtgttgatttcaatggta 6615915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 42922840 - 42922894
Alignment:
Q  166 tagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    |||| ||||||| |||| | | |||||||||| ||||||||||||||||||||||    
T  42922840 tagtcgtttaagatttgtgcatgattattaagaaaatgattaattgtgttgattt 42922894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 34310249 - 34310196
Alignment:
Q  17 ctctgtatggactta-ccctccaaaattggcatcagagggaatcaaacatgaga 69  Q
    ||||||||||||||| ||| |||||||||||| ||||||||||| ||| |||||    
T  34310249 ctctgtatggacttagcccaccaaaattggcaccagagggaatcgaacctgaga 34310196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 37495154 - 37495101
Alignment:
Q  17 ctctgtatggactta-ccctccaaaattggcatcagagggaatcaaacatgaga 69  Q
    ||||||||||||||| ||| |||||||||||| ||||||||||| ||| |||||    
T  37495154 ctctgtatggacttagcccaccaaaattggcaccagagggaatcgaacctgaga 37495101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 41478990 - 41478905
Alignment:
Q  143 ttactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||||||||  ||||  |||| |||| || ||||||||| |  ||||| ||||| ||||||||||||||| | ||||||||||||    
T  41478990 ttactctctctatctctaaataatagtcgtctaaggtttgtgcgcgatttttaagaaaatgattaattgtgcttatttcaatggta 41478905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 41492465 - 41492380
Alignment:
Q  143 ttactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||||||||| |||   |||| |||| || ||||||||| |  ||||| ||||| ||||||||||||||| | ||||||||||||    
T  41492465 ttactctctccatctttaaataatagtcgtctaaggtttgtgcgcgatttttaagaaaatgattaattgtgcttatttcaatggta 41492380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 15931165 - 15931113
Alignment:
Q  17 ctctgtatggacttaccctccaaaattggcatcagagggaatcaaacatgaga 69  Q
    ||||||||||||||| || || ||||||||| ||||||||||| ||| |||||    
T  15931165 ctctgtatggacttagccaccgaaattggcaccagagggaatcgaacctgaga 15931113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 6e-27; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 143 - 228
Target Start/End: Original strand, 21216054 - 21216139
Alignment:
Q  143 ttactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||||||||||||||||||| | ||| |||||||||||| | | |||||||||||||||||||||||||||||||||||||||||    
T  21216054 ttactctctccgtctcacaatgtcagtcgtttaaggtttgtgcatgattattaaggaaatgattaattgtgttgatttcaatggta 21216139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 154 - 228
Target Start/End: Complemental strand, 1739792 - 1739718
Alignment:
Q  154 gtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||||||||||||| || ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  1739792 gtctcacaatattagtcgtctaaggtttgtgtacgattattaaggaaataattaattgtgttgatttcaatggta 1739718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 151 - 225
Target Start/End: Complemental strand, 39405917 - 39405843
Alignment:
Q  151 tccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatg 225  Q
    ||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||| |||||||||    
T  39405917 tccgtctcacaatattagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttaatttcaatg 39405843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 143 - 228
Target Start/End: Original strand, 1875545 - 1875630
Alignment:
Q  143 ttactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||| |||||||| |  |||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  1875545 ttactccctccgtcttattatattagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggta 1875630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 144 - 228
Target Start/End: Complemental strand, 39482777 - 39482693
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||| |||||||||||||||||||| ||||||| |||| | |||||||||||| ||||||||||||||||||||||||| ||||    
T  39482777 tactccctccgtctcacaatattagtcgtttaagatttgtgcacgattattaagaaaatgattaattgtgttgatttcaagggta 39482693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 144 - 228
Target Start/End: Original strand, 11976890 - 11976974
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||| |||||||||| ||||||||| |||||||||||| | | |||||||| |||||| |||||||||||||||||||||||||    
T  11976890 tactccctccgtctcataatattagtcgtttaaggtttgtgcatgattattatggaaatcattaattgtgttgatttcaatggta 11976974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 143 - 225
Target Start/End: Complemental strand, 51275 - 51193
Alignment:
Q  143 ttactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatg 225  Q
    ||||||| ||||||||  |||| ||||||||||||||||| | |||||||||||| |||||||||||||||||||||| ||||    
T  51275 ttactctatccgtctctaaataatagttgtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgattttaatg 51193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 152 - 225
Target Start/End: Complemental strand, 31082773 - 31082700
Alignment:
Q  152 ccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatg 225  Q
    |||||||||||||||||||||||| |||||| | ||||| ||||||||||||||||||||| ||||||| ||||    
T  31082773 ccgtctcacaatattagttgtttatggtttgtgcacgataattaaggaaatgattaattgtcttgattttaatg 31082700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 166 - 225
Target Start/End: Complemental strand, 7173054 - 7172995
Alignment:
Q  166 tagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatg 225  Q
    ||||||||||||||||| |||  |||||||| ||||||||||||||||||||||||||||    
T  7173054 tagttgtttaaggtttgtgtatcattattaaagaaatgattaattgtgttgatttcaatg 7172995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 34639282 - 34639404
Alignment:
Q  1 ctaagccagaacaaaactctgtatggacttaccctccaaaattggcatcagagggaatcaaacatgagatcgtgataggagcacactccacgatcttaag 100  Q
    |||||||||| |||| |||||||||||||||||| || ||||||||| ||||||| ||| | | ||||| | ||| |||||||||||||| ||||  |||    
T  34639282 ctaagccagagcaaagctctgtatggacttacccaccgaaattggcaccagaggg-atcgagcctgagaccttgagaggagcacactccaagatcccaag 34639380  T
Q  101 ccaacgagtagaccaaccctaaat 124  Q
    ||||| | ||||| ||||| ||||    
T  34639381 ccaaccactagactaaccccaaat 34639404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 228
Target Start/End: Original strand, 7703132 - 7703194
Alignment:
Q  166 tagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||| |||||| ||||| ||| ||||||||||||||| |||||||||||||||||||||||||    
T  7703132 tagtcgtttaaagtttgtgtaagattattaaggaaataattaattgtgttgatttcaatggta 7703194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 228
Target Start/End: Complemental strand, 31271161 - 31271099
Alignment:
Q  166 tagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||| |||||||||||| |||||||||||||| |||||||| ||||||||||||| |||||||    
T  31271161 tagtcgtttaaggtttgtgtacgattattaagaaaatgattgattgtgttgattttaatggta 31271099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 151 - 228
Target Start/End: Original strand, 45425627 - 45425704
Alignment:
Q  151 tccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||||||| ||||||||| ||||||| |||  | | |||||||||| |||||||||||||||||||||| |||||||    
T  45425627 tccgtctcataatattagtcgtttaagttttatgcatgattattaagaaaatgattaattgtgttgattttaatggta 45425704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 228
Target Start/End: Original strand, 9300067 - 9300151
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||| |||| ||||||||||||  |||||||||||||  | |||||||||||| ||||||||  |||||||||||| |||||||    
T  9300067 tactccctccatctcacaatattgattgtttaaggtttatgcacgattattaagaaaatgattgtttgtgttgattttaatggta 9300151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 42972490 - 42972546
Alignment:
Q  172 tttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||||||||| | |||||||||||| |||||||||||||| |||||||||||||||    
T  42972490 tttaaggtttgtgcacgattattaagaaaatgattaattgttttgatttcaatggta 42972546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 36967506 - 36967447
Alignment:
Q  161 aatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    |||| |||| |||||||||||  | |||||||||||||||||||||||||||||||||||    
T  36967506 aataatagtcgtttaaggtttatgcacgattattaaggaaatgattaattgtgttgattt 36967447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 228
Target Start/End: Original strand, 39300912 - 39300979
Alignment:
Q  161 aatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||| |||| ||||||| |||| ||||||||||||| ||||||||||||| |||||||||| ||||||    
T  39300912 aatagtagtcgtttaagatttgtgtacgattattaaagaaatgattaattatgttgatttcgatggta 39300979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 129
Target Start/End: Original strand, 26168926 - 26169051
Alignment:
Q  3 aagccagaacaaaactctgtatggacttaccctccaaaattggcatcagagggaatcaaacatgagatcgtgataggagcacactccacgatcttaagcc 102  Q
    ||||||||||||  ||||||||| |||| ||| || |||||||||||||  |||||||||| ||||| | ||| ||||||| |||||| ||||  ||||     
T  26168926 aagccagaacaag-ctctgtatgaacttgcccaccgaaattggcatcaggaggaatcaaacctgagaccttgagaggagcaaactccaagatcccaagca 26169024  T
Q  103 aacgagtagaccaaccctaaattggtt 129  Q
    ||| | ||| |||||||||||| ||||    
T  26169025 aaccactaggccaaccctaaatgggtt 26169051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 228
Target Start/End: Complemental strand, 6611859 - 6611775
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||| |||| ||| ||||||||||| ||||||| |||    |||||||||||  |||||||||||| |||||||||||||||||    
T  6611859 tactccctccatcttacaatattagtcgtttaagatttacacacgattattaaaaaaatgattaattatgttgatttcaatggta 6611775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 228
Target Start/End: Original strand, 10179901 - 10179985
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||| |||||||||  || | |||| |||||||||||| | |||||||||||| |||||| || |||| |||||||||||||||    
T  10179901 tactccctccgtctctaaaaaatagtcgtttaaggtttgtgcacgattattaagaaaatgagtagttgtattgatttcaatggta 10179985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 26626088 - 26626139
Alignment:
Q  166 tagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttga 217  Q
    |||| |||||||||||  | ||||||||||||||||||||||||||||||||    
T  26626088 tagtcgtttaaggtttatgcacgattattaaggaaatgattaattgtgttga 26626139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 187 - 225
Target Start/End: Original strand, 10953405 - 10953443
Alignment:
Q  187 cgattattaaggaaatgattaattgtgttgatttcaatg 225  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  10953405 cgattattaaggaaatgattaattgtgttgattttaatg 10953443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 187 - 225
Target Start/End: Original strand, 10961410 - 10961448
Alignment:
Q  187 cgattattaaggaaatgattaattgtgttgatttcaatg 225  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  10961410 cgattattaaggaaatgattaattgtgttgattttaatg 10961448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 220
Target Start/End: Complemental strand, 32678838 - 32678804
Alignment:
Q  186 acgattattaaggaaatgattaattgtgttgattt 220  Q
    |||||||||||||||||||||||||||||||||||    
T  32678838 acgattattaaggaaatgattaattgtgttgattt 32678804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 13335351 - 13335302
Alignment:
Q  171 gtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    |||||||||||  | |||||||||||||||||| ||||||||||||||||    
T  13335351 gtttaaggtttatgcacgattattaaggaaatggttaattgtgttgattt 13335302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 34393907 - 34393984
Alignment:
Q  143 ttactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    ||||||| ||||||||  |||| |||| |||||| |||   | ||| |||||||||||||||||||||||||||||||    
T  34393907 ttactctatccgtctctaaataatagtcgtttaaagttgatgcacggttattaaggaaatgattaattgtgttgattt 34393984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 228
Target Start/End: Original strand, 44761460 - 44761532
Alignment:
Q  143 ttactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||| |||||||||||||||||||| ||||||||||||||             |||||||||||||||||||||||||||||||    
T  44761460 ttactccctccgtctcacaatattagtcgtttaaggtttgag-------------gaaatgattaattgtgttgatttcaatggta 44761532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 124
Target Start/End: Original strand, 8387535 - 8387642
Alignment:
Q  17 ctctgtatggacttaccctccaaaattggcatcagagggaatcaaacatgagatcgtgataggagcacactccacgatcttaagccaacgagtagaccaa 116  Q
    |||||||||||||| ||| |||||||||||| |||||| |||| ||| ||||| | ||| || |||| |||| | ||||| ||| |||| | ||| ||||    
T  8387535 ctctgtatggacttgcccaccaaaattggcaccagaggaaatcgaacttgagaccctgagagaagcaaactctaagatctcaagacaaccactaggccaa 8387634  T
Q  117 ccctaaat 124  Q
    ||| ||||    
T  8387635 ccccaaat 8387642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 220
Target Start/End: Original strand, 34948686 - 34948717
Alignment:
Q  189 attattaaggaaatgattaattgtgttgattt 220  Q
    ||||||||||||||||||||||||||||||||    
T  34948686 attattaaggaaatgattaattgtgttgattt 34948717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 228
Target Start/End: Original strand, 396611 - 396649
Alignment:
Q  190 ttattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||||||||||||||||||| |||||||||||| ||||    
T  396611 ttattaaggaaatgattaattatgttgatttcaacggta 396649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 32476422 - 32476368
Alignment:
Q  171 gtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatg 225  Q
    |||||||||||| | ||| |||||||| |||||||| ||| ||||||||||||||    
T  32476422 gtttaaggtttgtgcacggttattaagaaaatgattgattctgttgatttcaatg 32476368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 228
Target Start/End: Complemental strand, 41092114 - 41092072
Alignment:
Q  186 acgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||| |||| |||| ||||||||||||||||||||||||||    
T  41092114 acgatttttaaagaaacgattaattgtgttgatttcaatggta 41092072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 228
Target Start/End: Original strand, 3117021 - 3117058
Alignment:
Q  191 tattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||| |||||||||||| ||||||||||||||||||    
T  3117021 tattaacgaaatgattaatagtgttgatttcaatggta 3117058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 3734713 - 3734826
Alignment:
Q  17 ctctgtatggactta-ccctccaaaattggcatcagagggaatcaaacatgagatcgtgataggagcacactccacgatcttaagccaacgagtagacca 115  Q
    ||||||||||||||| ||| || ||||||||| ||||||||||| ||| ||||| | |   ||||||| |||||| ||||  |||||||| | ||| |||    
T  3734713 ctctgtatggacttagcccaccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggcca 3734812  T
Q  116 accctaaattggtt 129  Q
    |||| |||| ||||    
T  3734813 accccaaatgggtt 3734826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 19471720 - 19471667
Alignment:
Q  17 ctctgtatggacttacc-ctccaaaattggcatcagagggaatcaaacatgaga 69  Q
    ||||||||||||||| | | |||||||||||| ||||||||||||||| |||||    
T  19471720 ctctgtatggacttagctcaccaaaattggcaccagagggaatcaaacctgaga 19471667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 19542644 - 19542591
Alignment:
Q  17 ctctgtatggacttacc-ctccaaaattggcatcagagggaatcaaacatgaga 69  Q
    ||||||||||||||| | | |||||||||||| ||||||||||||||| |||||    
T  19542644 ctctgtatggacttagctcaccaaaattggcaccagagggaatcaaacctgaga 19542591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 19590052 - 19590105
Alignment:
Q  17 ctctgtatggacttacc-ctccaaaattggcatcagagggaatcaaacatgaga 69  Q
    ||||||||||||||| | | |||||||||||| ||||||||||||||| |||||    
T  19590052 ctctgtatggacttagctcaccaaaattggcaccagagggaatcaaacctgaga 19590105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 40996346 - 40996395
Alignment:
Q  171 gtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    |||||||||||  | || ||| ||||||||||||||||||||||||||||    
T  40996346 gtttaaggtttatgcacaattgttaaggaaatgattaattgtgttgattt 40996395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 220
Target Start/End: Original strand, 2767253 - 2767321
Alignment:
Q  152 ccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    |||||||  |||| ||||||||| |||||   | ||| ||||||||||||| |||||||||||||||||    
T  2767253 ccgtctctaaatagtagttgtttgaggttgatgcacggttattaaggaaataattaattgtgttgattt 2767321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 21649317 - 21649373
Alignment:
Q  169 ttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatg 225  Q
    |||||||||||||| |||| ||| ||||| ||||| |||||| |||||||| |||||    
T  21649317 ttgtttaaggtttgtgtacaatttttaagaaaatgtttaattatgttgattccaatg 21649373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 28072137 - 28072173
Alignment:
Q  190 ttattaaggaaatgattaattgtgttgatttcaatgg 226  Q
    |||||||||||||||||||| |||||||||| |||||    
T  28072137 ttattaaggaaatgattaatagtgttgattttaatgg 28072173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 33765794 - 33765746
Alignment:
Q  172 tttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    ||||||||||| | || ||| |||||||||||||||||| |||||||||    
T  33765794 tttaaggtttgtgcacaatttttaaggaaatgattaattatgttgattt 33765746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 6e-27; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 1778804 - 1778723
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatg 225  Q
    ||||| |||||||||||||||||||| |||||||||||| | | ||||||||||||||||||||||||||||||||||||||    
T  1778804 tactccctccgtctcacaatattagtcgtttaaggtttgtgcatgattattaaggaaatgattaattgtgttgatttcaatg 1778723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 33491043 - 33491116
Alignment:
Q  151 tccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaat 224  Q
    ||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  33491043 tccgtctcacaatattagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaat 33491116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 144 - 228
Target Start/End: Complemental strand, 37312112 - 37312028
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||| || ||||||||||||||||| |||||||||||  | |||||||||||||||||||||||||||||||||||||||||||    
T  37312112 tactccctacgtctcacaatattagtcgtttaaggtttatgcacgattattaaggaaatgattaattgtgttgatttcaatggta 37312028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 144 - 228
Target Start/End: Original strand, 43253816 - 43253900
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||| |||||||||||||||||  | |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  43253816 tactccctccgtctcacaatattgatcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggta 43253900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 153 - 228
Target Start/End: Original strand, 23004345 - 23004419
Alignment:
Q  153 cgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||||||||||||||| ||||||||||||  ||| |||||||||||||||||||||||||| |||||||||||||    
T  23004345 cgtctcacaatattagtcgtttaaggtttgt-tactattattaaggaaatgattaattgtgtcgatttcaatggta 23004419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 144 - 228
Target Start/End: Original strand, 37695618 - 37695703
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggttt-gagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||| |||||||||  |||| |||| ||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||    
T  37695618 tactccctccgtctctaaataatagtcgtttaaggttttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggta 37695703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 19823151 - 19823097
Alignment:
Q  166 tagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  19823151 tagttgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgattt 19823097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 10366622 - 10366679
Alignment:
Q  171 gtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||    
T  10366622 gtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggta 10366679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 27471491 - 27471414
Alignment:
Q  150 ctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggt 227  Q
    ||||||||||||| |||| | ||||||| |||| | |||||||||||| |||||||||||| ||||||||||||||||    
T  27471491 ctccgtctcacaacattaatcgtttaagatttgtgcacgattattaagaaaatgattaattatgttgatttcaatggt 27471414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 144 - 228
Target Start/End: Original strand, 8679007 - 8679091
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||| |||||||||  |||  |||| ||||||| |||  | |||||||||||||||||||||||||||||||||||||||||||    
T  8679007 tactccctccgtctctaaattatagtcgtttaagatttatgcacgattattaaggaaatgattaattgtgttgatttcaatggta 8679091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 144 - 228
Target Start/End: Original strand, 30190613 - 30190697
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||| ||||||||  || | |||| |||||||||||| | ||| |||| ||||||||||||||||||||||||||||||||||    
T  30190613 tactctttccgtctctaaaaaatagtcgtttaaggtttgtgcacggttatgaaggaaatgattaattgtgttgatttcaatggta 30190697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 169 - 228
Target Start/End: Original strand, 28690760 - 28690819
Alignment:
Q  169 ttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||||||||||| | ||||||||||| |||||||||||||||||||||||||| ||||    
T  28690760 ttgtttaaggtttgtgcacgattattaaagaaatgattaattgtgttgatttcaacggta 28690819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 129
Target Start/End: Original strand, 4252509 - 4252599
Alignment:
Q  39 aaattggcatcagagggaatcaaacatgagatcgtgataggagcacactccacgatcttaagccaacgagtagaccaaccctaaattggtt 129  Q
    ||||||||| ||||||||||||||| ||||| | ||| |||||||||||||| ||||| |||||||| | ||| ||||||| |||| ||||    
T  4252509 aaattggcaccagagggaatcaaacttgagaccttgagaggagcacactccaagatctcaagccaaccactaggccaaccccaaatgggtt 4252599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 105
Target Start/End: Complemental strand, 26158922 - 26158836
Alignment:
Q  19 ctgtatggacttaccctccaaaattggcatcagagggaatcaaacatgagatcgtgataggagcacactccacgatcttaagccaac 105  Q
    |||||||||||||||| || ||||||||| || ||||||| |||| ||||| | ||| |||||||||||||| ||||| ||||||||    
T  26158922 ctgtatggacttacccaccgaaattggcaccaaagggaatgaaacctgagaccttgagaggagcacactccaagatctcaagccaac 26158836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 143 - 224
Target Start/End: Original strand, 36460368 - 36460449
Alignment:
Q  143 ttactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaat 224  Q
    |||||| |||| ||| ||||||||||| |||||| ||||| | |||||||||||| |||| |||||||||||| ||||||||    
T  36460368 ttactccctccatcttacaatattagtcgtttaaagtttgtgcacgattattaagaaaattattaattgtgttaatttcaat 36460449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 228
Target Start/End: Complemental strand, 38795506 - 38795422
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||| |||| ||||| |||| |||| |||||| ||||| | |||||  ||||||||||||||||||||||| ||||||||||||    
T  38795506 tactccctccatctcaaaataatagtcgtttaatgtttgtgcacgatatttaaggaaatgattaattgtgtttatttcaatggta 38795422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 223
Target Start/End: Original strand, 49447766 - 49447826
Alignment:
Q  163 tattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaa 223  Q
    ||||||| |||||| ||||| ||||||| ||||| ||||||||||||||||||||||||||    
T  49447766 tattagtcgtttaatgtttgtgtacgataattaacgaaatgattaattgtgttgatttcaa 49447826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 224
Target Start/End: Original strand, 50035170 - 50035250
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaat 224  Q
    ||||| |||||||||||||||||||   ||||||||||| | | |||||||||| |||||| ||||| |||||||||||||    
T  50035170 tactccctccgtctcacaatattagacttttaaggtttgtgcatgattattaagaaaatgaataattatgttgatttcaat 50035250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 12736542 - 12736600
Alignment:
Q  161 aatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatt 219  Q
    |||| ||||||||||| ||||| | |||||| |||||||||||||||||||||||||||    
T  12736542 aataatagttgtttaaagtttgtgcacgatttttaaggaaatgattaattgtgttgatt 12736600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 228
Target Start/End: Original strand, 24569095 - 24569137
Alignment:
Q  186 acgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  24569095 acgattattaagaaaatgattaattgtgttgatttcaatggta 24569137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 31537928 - 31538042
Alignment:
Q  17 ctctgtatggactta-ccctccaaaattggcatcagagggaatcaaacatgagatcgtgataggagcacactccacgatcttaagccaacgagtagacca 115  Q
    |||||||| |||||| ||| |||||||||||| ||||||||||||||||||||| |     ||||||| |||||| |||| ||||||||| | ||| |||    
T  31537928 ctctgtatagacttagcccaccaaaattggcaccagagggaatcaaacatgagacctctggaggagcaaactccaagatcctaagccaaccactaggcca 31538027  T
Q  116 accctaaattggttt 130  Q
    |||| |||| |||||    
T  31538028 accccaaatgggttt 31538042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 150 - 228
Target Start/End: Original strand, 51064777 - 51064855
Alignment:
Q  150 ctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||||||| ||||||||| |||||| ||||  | |||| ||||||  |||||||||||||||||| |||||||||||    
T  51064777 ctccgtctcataatattagtcgtttaaagtttatgcacgaatattaaaaaaatgattaattgtgttgctttcaatggta 51064855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 17652903 - 17652834
Alignment:
Q  151 tccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    ||||||||  |||| |||| |||| ||||||  | |||||||||||||||||||||||||||||||||||    
T  17652903 tccgtctctaaataatagtcgtttgaggtttatgcacgattattaaggaaatgattaattgtgttgattt 17652834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 37772944 - 37773001
Alignment:
Q  171 gtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||||||||| | | ||||||||||||||||||||||||| |||||| ||||||||    
T  37772944 gtttaaggtttgtgcatgattattaaggaaatgattaattgtattgattacaatggta 37773001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 228
Target Start/End: Complemental strand, 11632234 - 11632159
Alignment:
Q  152 ccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||||| |||||||||  |||||| |||| | |||||||||||  ||||||||||||||||||||||||| ||||    
T  11632234 ccgtctcataatattagtcatttaagatttgtgcacgattattaaa-aaatgattaattgtgttgatttcaacggta 11632159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 19612045 - 19611989
Alignment:
Q  169 ttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatg 225  Q
    |||||||| ||||| |||||||| ||||| || ||||||||||||||||||||||||    
T  19612045 ttgtttaaagtttgtgtacgatttttaagaaagtgattaattgtgttgatttcaatg 19611989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 3313400 - 3313349
Alignment:
Q  156 ctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgatta 207  Q
    |||||||||||||| |||||||||||| | |||||||||||| |||||||||    
T  3313400 ctcacaatattagtcgtttaaggtttgtgcacgattattaagaaaatgatta 3313349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 14194690 - 14194636
Alignment:
Q  171 gtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatg 225  Q
    |||||||||||| | |||||| |||| |||||||| |||||||||||||||||||    
T  14194690 gtttaaggtttgtgcacgatttttaaagaaatgatcaattgtgttgatttcaatg 14194636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 222
Target Start/End: Complemental strand, 40462466 - 40462396
Alignment:
Q  152 ccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttca 222  Q
    |||||||| |||| || ||||||||||||||||   |||| ||||| |||||||||||||| |||||||||    
T  40462466 ccgtctcaaaataataattgtttaaggtttgagcgtgatttttaagaaaatgattaattgttttgatttca 40462396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 1242094 - 1242037
Alignment:
Q  3 aagccagaacaaaactctgtatggactta-ccctccaaaattggcatcagagggaatc 59  Q
    |||||||| |||| ||||||||||||||| ||| |||||||||||| |||||||||||    
T  1242094 aagccagagcaaagctctgtatggacttagcccaccaaaattggcaccagagggaatc 1242037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 222
Target Start/End: Original strand, 5322914 - 5322968
Alignment:
Q  166 tagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttca 222  Q
    ||||||||||||||||| | |||||||||||  |||||||||||| |||||||||||    
T  5322914 tagttgtttaaggtttgtgcacgattattaa--aaatgattaattatgttgatttca 5322968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 221
Target Start/End: Original strand, 31158483 - 31158551
Alignment:
Q  152 ccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttc 221  Q
    |||| ||| ||||||||| |||||||||||| | |||||||||||  ||||||||||||||| |||||||    
T  31158483 ccgtatcataatattagtcgtttaaggtttgtgcacgattattaa-aaaatgattaattgtgctgatttc 31158551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 38137403 - 38137476
Alignment:
Q  151 tccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaat 224  Q
    ||||||||| ||||||||| |||||||||||| | | |||||| || ||||| ||| ||||||| |||||||||    
T  38137403 tccgtctcataatattagtcgtttaaggtttgtgcatgattataaatgaaataattcattgtgtcgatttcaat 38137476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 225
Target Start/End: Original strand, 51837940 - 51837993
Alignment:
Q  172 tttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatg 225  Q
    ||||||||||| | | || ||||||| |||||||||||||||||||||||||||    
T  51837940 tttaaggtttgtgcatgagtattaagtaaatgattaattgtgttgatttcaatg 51837993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 53560372 - 53560303
Alignment:
Q  151 tccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    ||||||||  |||| |||||||||||||||   | ||||| ||||||||||||||||||| |||||||||    
T  53560372 tccgtctctaaataatagttgtttaaggttgatgcacgatgattaaggaaatgattaattatgttgattt 53560303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 45811800 - 45811733
Alignment:
Q  161 aatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||| ||||||||||||||||| ||  |||  ||||| |||||||||||| ||||||||| |||||||    
T  45811800 aataatagttgtttaaggtttgtgtgtgatatttaagaaaatgattaattatgttgattttaatggta 45811733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 29023941 - 29023995
Alignment:
Q  166 tagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    |||| |||||||||||  | |||||||||||  ||||||||||||||||||||||    
T  29023941 tagtcgtttaaggtttatgcacgattattaaaaaaatgattaattgtgttgattt 29023995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 220
Target Start/End: Complemental strand, 37497612 - 37497578
Alignment:
Q  186 acgattattaaggaaatgattaattgtgttgattt 220  Q
    ||||||||||||||||||||| |||||||||||||    
T  37497612 acgattattaaggaaatgatttattgtgttgattt 37497578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 19609454 - 19609381
Alignment:
Q  151 tccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaat 224  Q
    ||||||||| |||| || | ||||||| |||| ||| || | ||||| ||||||||| ||||||||||||||||    
T  19609454 tccgtctcaaaataataatcgtttaagatttgtgtatgaattttaagaaaatgattatttgtgttgatttcaat 19609381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 34957665 - 34957592
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttga 217  Q
    ||||| || ||||||  |||| |||| |||||||||||  | || |||| ||||||||||||||||||||||||    
T  34957665 tactcccttcgtctctaaataatagtcgtttaaggtttatggacaattactaaggaaatgattaattgtgttga 34957592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 36476747 - 36476662
Alignment:
Q  143 ttactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||| |||||||||  |||  | |||||||||||||||   ||| |||||||| |||| ||| |||||||||||| ||||||||    
T  36476747 ttactccctccgtctctaaattattgttgtttaaggtttgttcacggttattaagaaaataattgattgtgttgattgcaatggta 36476662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 44301724 - 44301643
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatg 225  Q
    ||||| |||||||||| |||| | || |||||||||||| |  ||| | ||||||||||  |||||| ||||||||||||||    
T  44301724 tactccctccgtctcaaaataatggtcgtttaaggtttgtgcccgacttttaaggaaatatttaattatgttgatttcaatg 44301643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 225
Target Start/End: Complemental strand, 7757640 - 7757608
Alignment:
Q  193 ttaaggaaatgattaattgtgttgatttcaatg 225  Q
    ||||||||| |||||||||||||||||||||||    
T  7757640 ttaaggaaaagattaattgtgttgatttcaatg 7757608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 34750630 - 34750574
Alignment:
Q  172 tttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||||||||| | |||||| || | ||||||||| ||||||||||||| |||||||    
T  34750630 tttaaggtttgtgcacgatttttgatgaaatgattgattgtgttgattttaatggta 34750574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 224
Target Start/End: Complemental strand, 49830287 - 49830211
Alignment:
Q  149 tctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaa-tgattaattgtgttgatttcaat 224  Q
    ||||||||||  |||  |||| |||||| ||||| | |||||||||||  ||| |||||||||||||||||||||||    
T  49830287 tctccgtctctaaattatagtcgtttaacgtttgtgcacgattattaaaaaaaatgattaattgtgttgatttcaat 49830211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 6e-27; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 143 - 228
Target Start/End: Original strand, 27501488 - 27501573
Alignment:
Q  143 ttactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||||||||||||||||||||| || |||||||||||| ||| |||||||||||||||||| |||| |||||||||||||||||    
T  27501488 ttactctctccgtctcacaatattcgtcgtttaaggtttgtgtatgattattaaggaaatgataaattatgttgatttcaatggta 27501573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 7438867 - 7438923
Alignment:
Q  154 gtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaatt 210  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  7438867 gtctcacaatattagttgtttaaggtttgagcacgattattaaggaaatgattaatt 7438923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 150 - 224
Target Start/End: Original strand, 5789605 - 5789679
Alignment:
Q  150 ctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaat 224  Q
    ||||||||||||||||||||  ||||||||||| | ||||||||||||||||||||||||||| |||| ||||||    
T  5789605 ctccgtctcacaatattagtcatttaaggtttgtgcacgattattaaggaaatgattaattgtattgaattcaat 5789679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 166 - 228
Target Start/End: Complemental strand, 19937817 - 19937755
Alignment:
Q  166 tagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  19937817 tagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggta 19937755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 151 - 228
Target Start/End: Complemental strand, 35314043 - 35313965
Alignment:
Q  151 tccgtctcacaatattagttgtttaaggtttga-gtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||||||||||||||||| ||||||   |||| | |||||||||||||||||||||||||||||||||||||||||||    
T  35314043 tccgtctcacaatattagtcgtttaaatattgatgcacgattattaaggaaatgattaattgtgttgatttcaatggta 35313965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 150 - 228
Target Start/End: Complemental strand, 45235737 - 45235659
Alignment:
Q  150 ctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||||||  |||| |||| |||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||    
T  45235737 ctccgtctctaaataatagtcgtttaaggtttgtgcacgattattaaggaaatgattgattgtgttgatttcaatggta 45235659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 151 - 228
Target Start/End: Original strand, 16377614 - 16377691
Alignment:
Q  151 tccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||||||||||||||| | ||||||| |||| | ||||||||||| |||||||||||||||||||||| ||||||||    
T  16377614 tccgtctcacaatattaatcgtttaagatttgtgcacgattattaaagaaatgattaattgtgttgattacaatggta 16377691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 3323250 - 3323321
Alignment:
Q  157 tcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||||||||||| |||||||||||| | ||||||||||   ||||||||||||||||||||||||||||||    
T  3323250 tcacaatattagtcgtttaaggtttgtgcacgattattataaaaatgattaattgtgttgatttcaatggta 3323321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 17695465 - 17695408
Alignment:
Q  171 gtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||    
T  17695465 gtttaaggtttgtgcacgattattaaggaaatgattaattgtattgatttcaatggta 17695408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 26607946 - 26608003
Alignment:
Q  171 gtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||    
T  26607946 gtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggta 26608003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 8192426 - 8192549
Alignment:
Q  1 ctaagccagaacaaaactctgtatggacttaccctccaaaattggcatcagagggaatcaaacatgagatcgtgataggagcacactccacgatcttaag 100  Q
    |||||||||| |||| |||| ||||||||| ||| || | ||||||| ||||||||||| ||| ||||| | ||| |||||||||||||| ||||  |||    
T  8192426 ctaagccagagcaaagctctatatggacttgcccaccgacattggcaccagagggaatcgaacctgagaccttgagaggagcacactccaagatcccaag 8192525  T
Q  101 ccaacgagtagaccaaccctaaat 124  Q
    ||||| | ||| ||||||| ||||    
T  8192526 ccaaccactaggccaaccccaaat 8192549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 142 - 225
Target Start/End: Original strand, 8947001 - 8947084
Alignment:
Q  142 gttactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatg 225  Q
    ||||||| |||  ||||||||||||| | |||||| ||||| | |  |||||||||||||||||||||||||||||||||||||    
T  8947001 gttactccctctatctcacaatattaatcgtttaaagtttgtgcataattattaaggaaatgattaattgtgttgatttcaatg 8947084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 31448666 - 31448720
Alignment:
Q  166 tagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    |||| |||||||||||| | |||||||||||||||||||||||||||||||||||    
T  31448666 tagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgattt 31448720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 39691625 - 39691571
Alignment:
Q  171 gtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatg 225  Q
    |||||||||||| | |||||||||||| |||||||||||||||||||||||||||    
T  39691625 gtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatg 39691571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 161 - 224
Target Start/End: Complemental strand, 39443858 - 39443795
Alignment:
Q  161 aatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaat 224  Q
    ||||||||| |||||||||||| | || ||||||||| |||||||||||| |||||||||||||    
T  39443858 aatattagtcgtttaaggtttgtgcacaattattaagaaaatgattaattttgttgatttcaat 39443795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 16806021 - 16805967
Alignment:
Q  166 tagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    |||| |||||||||||| | ||||||||||| |||||||||||||||||||||||    
T  16806021 tagtagtttaaggtttgtgcacgattattaaagaaatgattaattgtgttgattt 16805967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 16845302 - 16845248
Alignment:
Q  166 tagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    |||| |||||||||||| | ||||||||||| |||||||||||||||||||||||    
T  16845302 tagtagtttaaggtttgtgcacgattattaaagaaatgattaattgtgttgattt 16845248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 220
Target Start/End: Complemental strand, 25637644 - 25637567
Alignment:
Q  142 gttactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    |||||||  ||||||||  |||| ||||||||||||||||  | |||||||| ||||||||||||||||||||||||||    
T  25637644 gttactccatccgtctctaaataatagttgtttaaggtttatgcacgattat-aaggaaatgattaattgtgttgattt 25637567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 220
Target Start/End: Complemental strand, 16463843 - 16463775
Alignment:
Q  152 ccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    |||||||  |||| |||| |||||||||||  | ||| |||||||||||||||||||||||||||||||    
T  16463843 ccgtctctaaataatagtcgtttaaggtttatgcacggttattaaggaaatgattaattgtgttgattt 16463775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 220
Target Start/End: Complemental strand, 39785750 - 39785674
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    ||||| |||||||||  |||| |||| ||||||||||   | ||| |||||||||||||||||||||||||||||||    
T  39785750 tactccctccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattt 39785674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 228
Target Start/End: Complemental strand, 37322569 - 37322506
Alignment:
Q  166 tagttgtttaaggtttgagtacgattattaaggaaa-tgattaattgtgttgatttcaatggta 228  Q
    |||| |||||||||||  | |||||||||||||||| ||||| |||||||||||||||||||||    
T  37322569 tagtcgtttaaggtttatgcacgattattaaggaaaatgattgattgtgttgatttcaatggta 37322506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 43115775 - 43115834
Alignment:
Q  166 tagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatg 225  Q
    |||| |||||| ||||| |  |||||||||| ||||||||||||||||||||||||||||    
T  43115775 tagtcgtttaaagtttgtgcgcgattattaaagaaatgattaattgtgttgatttcaatg 43115834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 225
Target Start/End: Original strand, 18853150 - 18853232
Alignment:
Q  143 ttactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatg 225  Q
    ||||||| ||||| ||| |||| |||| ||||||  |||| | |||||  |||||||||| ||||||||||||||||||||||    
T  18853150 ttactctatccgtatcaaaataatagtcgtttaaaatttgtgcacgatctttaaggaaataattaattgtgttgatttcaatg 18853232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 228
Target Start/End: Complemental strand, 34225726 - 34225668
Alignment:
Q  170 tgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||||||||||| | ||||||||||||||||||| ||||| | ||||||| |||||||    
T  34225726 tgtttaaggtttgtgcacgattattaaggaaatgaataattatattgattttaatggta 34225668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 105
Target Start/End: Original strand, 19525490 - 19525575
Alignment:
Q  20 tgtatggacttaccctccaaaattggcatcagagggaatcaaacatgagatcgtgataggagcacactccacgatcttaagccaac 105  Q
    ||||||||||| ||| |||||||||||| ||||||||||| ||| ||||||| ||| || | |||||| || ||||  ||||||||    
T  19525490 tgtatggacttgcccaccaaaattggcaccagagggaatcgaacctgagatcttgagagaaacacacttcaagatcccaagccaac 19525575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 19605935 - 19606024
Alignment:
Q  16 actctgtatggacttaccctccaaaattggcatcagagggaatcaaacatgagatcgtgataggagcacactccacgatcttaagccaac 105  Q
    ||||||||||||||| ||| || ||||| |||| |||||||||| ||| ||||| | ||| |||||| ||||||| ||||  ||||||||    
T  19605935 actctgtatggacttgcccaccgaaattagcattagagggaatcgaacctgagaccttgagaggagcgcactccaagatcccaagccaac 19606024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 36354401 - 36354470
Alignment:
Q  151 tccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    ||||||||  |||| ||||  ||||||||||  ||||||||||||||||||||| || ||||||||||||    
T  36354401 tccgtctctaaataatagtcatttaaggtttatgtacgattattaaggaaatgactagttgtgttgattt 36354470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 43410560 - 43410507
Alignment:
Q  172 tttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatg 225  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||| ||||||    
T  43410560 tttaatgtttgtgcacgattattaaggaaattattaattgtgttgatatcaatg 43410507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 19174885 - 19174817
Alignment:
Q  1 ctaagccagaacaaaactctgtatggacttaccctccaaaattggcatcagagggaatcaaacatgaga 69  Q
    |||||||||| |||| |||||||||||| ||||| || ||||||||| |||| |||||| ||| |||||    
T  19174885 ctaagccagagcaaagctctgtatggacctacccaccgaaattggcaccagaaggaatcgaacctgaga 19174817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 220
Target Start/End: Complemental strand, 36794446 - 36794370
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    |||||||||||||||  |||| |||| ||||||| ||   | | | |||||||||||||||||||||||||||||||    
T  36794446 tactctctccgtctctaaataatagtcgtttaagattgatgcatggttattaaggaaatgattaattgtgttgattt 36794370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 105
Target Start/End: Complemental strand, 40591289 - 40591201
Alignment:
Q  17 ctctgtatggacttaccctccaaaattggcatcagagggaatcaaacatgagatcgtgataggagcacactccacgatcttaagccaac 105  Q
    |||||||||||||| ||| || |||||| || |||| | |||||||| |||||   ||| |||||||||||||| ||||| ||||||||    
T  40591289 ctctgtatggacttgcccaccgaaattgccaccagaagaaatcaaacctgagactttgagaggagcacactccaagatctcaagccaac 40591201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 44976241 - 44976297
Alignment:
Q  14 aaactctgtatggactta-ccctccaaaattggcatcagagggaatcaaacatgaga 69  Q
    |||||||||||||||||| ||| |||||||||||| ||||||||||| ||| |||||    
T  44976241 aaactctgtatggacttagcccaccaaaattggcaccagagggaatcgaacctgaga 44976297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 8259017 - 8258951
Alignment:
Q  3 aagccagaacaaaactctgtatggactta-ccctccaaaattggcatcagagggaatcaaacatgaga 69  Q
    |||||||||||| | |||||||||||||| ||| ||||||||||| |||||||||||| ||| |||||    
T  8259017 aagccagaacaaga-tctgtatggacttaacccaccaaaattggcgtcagagggaatcgaacctgaga 8258951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 228
Target Start/End: Original strand, 14523369 - 14523407
Alignment:
Q  190 ttattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  14523369 ttattaaggaaatgattttttgtgttgatttcaatggta 14523407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 30943207 - 30943134
Alignment:
Q  12 caaaactctgtatggacttaccctccaaaattggcatcagagggaatcaaacatgagatcgtgataggagcaca 85  Q
    |||| |||||||||||||  ||| || |||||||||| |||| ||||||||| ||||| | ||| |||||||||    
T  30943207 caaagctctgtatggactagcccaccgaaattggcataagagagaatcaaacttgagaccttgagaggagcaca 30943134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 23787095 - 23787151
Alignment:
Q  14 aaactctgtatggactta-ccctccaaaattggcatcagagggaatcaaacatgaga 69  Q
    |||||||||||||| ||| ||| || ||||||||| ||||||||||||||| |||||    
T  23787095 aaactctgtatggatttagcccaccgaaattggcaccagagggaatcaaacctgaga 23787151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 220
Target Start/End: Original strand, 34120434 - 34120466
Alignment:
Q  188 gattattaaggaaatgattaattgtgttgattt 220  Q
    |||||||||| ||||||||||||||||||||||    
T  34120434 gattattaagaaaatgattaattgtgttgattt 34120466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 6e-27; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 155 - 228
Target Start/End: Complemental strand, 12039233 - 12039160
Alignment:
Q  155 tctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  12039233 tctcacaatattagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggta 12039160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 31042960 - 31042875
Alignment:
Q  143 ttactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||| ||||||||||||||||||||  ||||||||||| | | |||||||||||||||||||||||||||||||||||||||||    
T  31042960 ttactccctccgtctcacaatattagtcatttaaggtttgtgcatgattattaaggaaatgattaattgtgttgatttcaatggta 31042875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 144 - 228
Target Start/End: Original strand, 24991609 - 24991693
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||| |||||||||||||||||||| ||||||||||||   |||||||||||||||||||||||||||||||||||||| ||||    
T  24991609 tactccctccgtctcacaatattagtcgtttaaggtttgtacacgattattaaggaaatgattaattgtgttgatttcaacggta 24991693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 144 - 228
Target Start/End: Complemental strand, 28749153 - 28749069
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||| |||||||||| |||||| ||  |||||| |||| | |||||||||||||||||||||||||||||||||||||||||||    
T  28749153 tactccctccgtctcataatatttgtcatttaagatttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggta 28749069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 152 - 225
Target Start/End: Complemental strand, 9307781 - 9307708
Alignment:
Q  152 ccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatg 225  Q
    |||||| ||||||||||| ||||||||||||   ||||||||||||||||||||||| ||||||||||||||||    
T  9307781 ccgtcttacaatattagtcgtttaaggtttgtacacgattattaaggaaatgattaactgtgttgatttcaatg 9307708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 151 - 228
Target Start/End: Complemental strand, 11450038 - 11449961
Alignment:
Q  151 tccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||||||  |||| ||||||||||||||||| | |||||||||||||||||| |||||| |||||||||||||||||    
T  11450038 tccgtctctaaataatagttgtttaaggtttgtgcacgattattaaggaaatggttaattatgttgatttcaatggta 11449961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 144 - 228
Target Start/End: Complemental strand, 39864273 - 39864189
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||| |||||||||  |||  |||| |||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  39864273 tactccctccgtctctaaattatagtcgtttaaagtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggta 39864189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 159 - 228
Target Start/End: Original strand, 23168964 - 23169033
Alignment:
Q  159 acaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||||||||| |||||| ||||| | |||||||||||| |||| |||||||||||||||||||||||||    
T  23168964 acaatattagtcgtttaaagtttgtgcacgattattaagaaaataattaattgtgttgatttcaatggta 23169033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 225
Target Start/End: Complemental strand, 12151327 - 12151257
Alignment:
Q  155 tctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatg 225  Q
    |||||||||||| || |||||||||||| ||| |||||||||||| || ||||||| ||||||||||||||    
T  12151327 tctcacaatatttgtcgtttaaggtttgtgtatgattattaaggagattattaattatgttgatttcaatg 12151257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 16539730 - 16539636
Alignment:
Q  1 ctaagccagaacaaaactctgtatggacttaccctccaaaattggcatcagagggaatcaaacatgagatcgtgataggagcacactccacgatc 95  Q
    |||||||||  |||| |||||||||||||| ||| |||||||||||| ||||||||||||||| ||||| | ||  |||||| ||||||| ||||    
T  16539730 ctaagccagcgcaaagctctgtatggacttgcccaccaaaattggcaccagagggaatcaaacctgagaccttgcaaggagctcactccaagatc 16539636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 151 - 228
Target Start/End: Original strand, 6023612 - 6023689
Alignment:
Q  151 tccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||| ||| |||||||||| |||||| ||||| |  ||||||||| ||||||| ||||||||||||||||||||||||    
T  6023612 tccgcctcgcaatattagtcgtttaatgtttgtgcgcgattattacggaaatgtttaattgtgttgatttcaatggta 6023689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 26093529 - 26093472
Alignment:
Q  171 gtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||||| |||| | |||||||||||| ||||||||||||||||||||||||||||||    
T  26093529 gtttaagatttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggta 26093472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 228
Target Start/End: Original strand, 31978608 - 31978692
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||| |||||||||  |||  |||| |||||| ||||| | |||||||||||| ||| ||||||||||||||||||||||||||    
T  31978608 tactccctccgtctctaaattatagtcgtttaaagtttgtgcacgattattaagaaaaagattaattgtgttgatttcaatggta 31978692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 32970550 - 32970604
Alignment:
Q  171 gtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatg 225  Q
    |||||||||| |  ||||||||||||| |||||||||||||||||||||||||||    
T  32970550 gtttaaggttcgtatacgattattaagaaaatgattaattgtgttgatttcaatg 32970604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 166 - 228
Target Start/End: Original strand, 33733241 - 33733302
Alignment:
Q  166 tagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||| |||||| ||||| | ||||||||||||||||||||| |||||||||||||||||||||    
T  33733241 tagtcgtttaaagtttgtgcacgattattaaggaaatgatt-attgtgttgatttcaatggta 33733302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 228
Target Start/End: Original strand, 34031509 - 34031567
Alignment:
Q  170 tgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||||||||||| | | |||||||||||||||||||| ||||||||||| ||||||||    
T  34031509 tgtttaaggtttgtgcatgattattaaggaaatgattacttgtgttgattccaatggta 34031567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 44742262 - 44742221
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagt 185  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  44742262 tactctctccgtctcacaatattagtcgtttaaggtttgagt 44742221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 225
Target Start/End: Original strand, 6267821 - 6267893
Alignment:
Q  153 cgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatg 225  Q
    ||||||| |||| |||| |||||||||||| | || ||| |||| ||||||||||||||||||||||| ||||    
T  6267821 cgtctcaaaataatagtcgtttaaggtttgtgcactatttttaaagaaatgattaattgtgttgattttaatg 6267893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 220
Target Start/End: Complemental strand, 38787495 - 38787427
Alignment:
Q  152 ccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    |||||||  |||| |||| |||||||||||  | ||||||||||||||||||||| |||||||||||||    
T  38787495 ccgtctctaaataatagtcgtttaaggtttatgcacgattattaaggaaatgattgattgtgttgattt 38787427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 225
Target Start/End: Original strand, 6160425 - 6160496
Alignment:
Q  154 gtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatg 225  Q
    |||||| |||| |||| ||||| |  ||| |||||||| ||||| |||||||||||||||||||||||||||    
T  6160425 gtctcaaaataatagtcgtttacgacttgtgtacgatttttaagaaaatgattaattgtgttgatttcaatg 6160496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 228
Target Start/End: Complemental strand, 917164 - 917102
Alignment:
Q  166 tagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||| |||||||||||| | |||||||||||  |||||||||||| ||||||||| |||||||    
T  917164 tagtcgtttaaggtttgtgcacgattattaaataaatgattaattatgttgatttaaatggta 917102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 228
Target Start/End: Complemental strand, 2572608 - 2572546
Alignment:
Q  166 tagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||| |||||| ||||| |||||||||||||   ||||||||||||| |||||||||||||||    
T  2572608 tagtcgtttaaagtttgtgtacgattattaaaataatgattaattgtattgatttcaatggta 2572546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 16395025 - 16395079
Alignment:
Q  166 tagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    |||| |||||||||||  | |||||||||||| ||||||||||||||||||||||    
T  16395025 tagtcgtttaaggtttatgcacgattattaagaaaatgattaattgtgttgattt 16395079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 25237064 - 25237158
Alignment:
Q  1 ctaagccagaacaaaactctgtatggacttaccctccaaaattggcatcagagggaatcaaacatgagatcgtgataggagcacactccacgatc 95  Q
    ||||| |||| ||||||||||||||||||| ||| || |||||||||  |||||||||| ||| ||||| | ||| || |||| |||||| ||||    
T  25237064 ctaagtcagagcaaaactctgtatggacttgcccaccgaaattggcactagagggaatcgaacctgagaccttgagagaagcaaactccaagatc 25237158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 220
Target Start/End: Original strand, 30754939 - 30754973
Alignment:
Q  186 acgattattaaggaaatgattaattgtgttgattt 220  Q
    |||||||||||||||||||||||||||||||||||    
T  30754939 acgattattaaggaaatgattaattgtgttgattt 30754973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 43500762 - 43500816
Alignment:
Q  166 tagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    |||| |||||||||||  | ||||||||||||||||| |||||||||||||||||    
T  43500762 tagtcgtttaaggtttatgcacgattattaaggaaattattaattgtgttgattt 43500816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 21909989 - 21910038
Alignment:
Q  171 gtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    |||||||||||  | || ||||||||||||||||||||||||||||||||    
T  21909989 gtttaaggtttatgcacaattattaaggaaatgattaattgtgttgattt 21910038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 220
Target Start/End: Complemental strand, 37506290 - 37506213
Alignment:
Q  143 ttactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    |||||| |||||||||  |||| || | ||||||||||   | ||| |||||||||||||||||||||||||||||||    
T  37506290 ttactccctccgtctctaaataataatcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattt 37506213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 44707716 - 44707797
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatg 225  Q
    ||||| || ||||||| ||||||||| |||||| ||||  | ||||||||||  ||||||||||||| | ||||||||||||    
T  44707716 tactcccttcgtctcataatattagtcgtttaaagtttttgcacgattattatagaaatgattaattatattgatttcaatg 44707797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 7197338 - 7197450
Alignment:
Q  18 tctgtatggacttaccctccaaaattggcatcagagggaatcaaacatgagatcgtgataggagcacactccacgatcttaagccaacgagtagaccaac 117  Q
    ||||||| ||||||||| || ||||||||||||||||||||| ||| ||||| |     ||||||| |||||| ||||  |||||||| | ||| |||||    
T  7197338 tctgtattgacttacccaccgaaattggcatcagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaac 7197437  T
Q  118 cctaaattggttt 130  Q
    || |||| |||||    
T  7197438 cccaaatgggttt 7197450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 23734226 - 23734170
Alignment:
Q  14 aaactctgtatggactta-ccctccaaaattggcatcagagggaatcaaacatgaga 69  Q
    |||||||||||||||||| ||| || ||||||||||||||||||||| ||| |||||    
T  23734226 aaactctgtatggacttagcccaccgaaattggcatcagagggaatcgaacctgaga 23734170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 23741418 - 23741362
Alignment:
Q  14 aaactctgtatggactta-ccctccaaaattggcatcagagggaatcaaacatgaga 69  Q
    |||||||||||||||||| ||| || ||||||||||||||||||||| ||| |||||    
T  23741418 aaactctgtatggacttagcccaccgaaattggcatcagagggaatcgaacctgaga 23741362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 27687375 - 27687319
Alignment:
Q  172 tttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||||||||| | || ||||||||  ||||||||| ||||||||||||||||||||    
T  27687375 tttaaggtttgtgcacaattattaaaaaaatgattagttgtgttgatttcaatggta 27687319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 220
Target Start/End: Complemental strand, 42410156 - 42410080
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    |||||||| ||||||  |||| |||||||||||||||   | ||| |||||||  ||||||||||||||||||||||    
T  42410156 tactctcttcgtctctaaataatagttgtttaaggttgatgcacggttattaaaaaaatgattaattgtgttgattt 42410080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 228
Target Start/End: Complemental strand, 36702034 - 36701999
Alignment:
Q  193 ttaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||||||||||||||| |||||||||||||||||    
T  36702034 ttaaggaaatgattaattatgttgatttcaatggta 36701999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 228
Target Start/End: Complemental strand, 36718138 - 36718103
Alignment:
Q  193 ttaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||||||||||||||| |||||||||||||||||    
T  36718138 ttaaggaaatgattaattatgttgatttcaatggta 36718103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 37047112 - 37047025
Alignment:
Q  3 aagccagaacaaaactctgtatggacttaccctccaaaattggcatcagagggaatcaaacatgagatcgtgataggagcacactcca 90  Q
    |||| ||| |||| |||||||||||||  ||| |||||||| | | ||| ||||||||||| ||||| | ||| ||||||||||||||    
T  37047112 aagctagagcaaagctctgtatggactagcccaccaaaatttgtaccagggggaatcaaacctgagaccttgagaggagcacactcca 37047025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 39964596 - 39964545
Alignment:
Q  39 aaattggcatcagagggaatcaaacatgagatcgtgataggagcacactcca 90  Q
    ||||||||| ||||||||||||||| ||||| | ||| ||||||||||||||    
T  39964596 aaattggcaccagagggaatcaaacctgagaccttgagaggagcacactcca 39964545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 225
Target Start/End: Complemental strand, 4659872 - 4659838
Alignment:
Q  191 tattaaggaaatgattaattgtgttgatttcaatg 225  Q
    ||||||| |||||||||||||||||||||||||||    
T  4659872 tattaagaaaatgattaattgtgttgatttcaatg 4659838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 228
Target Start/End: Original strand, 15444483 - 15444521
Alignment:
Q  190 ttattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||||||||||||||||| |||||||||| |||||||    
T  15444483 ttattaaggaaatgattaatagtgttgattttaatggta 15444521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 220
Target Start/End: Original strand, 35367643 - 35367677
Alignment:
Q  186 acgattattaaggaaatgattaattgtgttgattt 220  Q
    |||||||||||| ||||||||||||||||||||||    
T  35367643 acgattattaagaaaatgattaattgtgttgattt 35367677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 220
Target Start/End: Complemental strand, 37276581 - 37276547
Alignment:
Q  186 acgattattaaggaaatgattaattgtgttgattt 220  Q
    ||||||||||||||||||||||| |||||||||||    
T  37276581 acgattattaaggaaatgattaactgtgttgattt 37276547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 5179382 - 5179435
Alignment:
Q  171 gtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaat 224  Q
    ||||||||||||   |||||| ||||  ||||||||||||||||||||||||||    
T  5179382 gtttaaggtttgtacacgattcttaacaaaatgattaattgtgttgatttcaat 5179435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 227
Target Start/End: Complemental strand, 7759335 - 7759294
Alignment:
Q  186 acgattattaaggaaatgattaattgtgttgatttcaatggt 227  Q
    |||||||||||  |||| ||||||||||||||||||||||||    
T  7759335 acgattattaaaaaaataattaattgtgttgatttcaatggt 7759294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 30677283 - 30677230
Alignment:
Q  17 ctctgtatggactta-ccctccaaaattggcatcagagggaatcaaacatgaga 69  Q
    ||||||||||||||| ||| || ||||||||| ||||||||||||||| |||||    
T  30677283 ctctgtatggacttagcccaccgaaattggcaccagagggaatcaaacctgaga 30677230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 32729651 - 32729538
Alignment:
Q  17 ctctgtatggacttaccctccaaaattggcatcagagggaatcaaacatgagatcgtgataggagcacactccacgatcttaagccaacgagtagaccaa 116  Q
    |||||||||||||| ||| || ||||||||| || |||||||| ||| |||||   ||| ||||||| |||| | ||||  |||||||| | ||| ||||    
T  32729651 ctctgtatggacttgcccaccgaaattggcaccatagggaatcgaacctgagactttgagaggagcaaactcgaagatcccaagccaaccactaggccaa 32729552  T
Q  117 ccctaaattggttt 130  Q
    ||| |||| |||||    
T  32729551 ccccaaatgggttt 32729538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 35682793 - 35682842
Alignment:
Q  176 aggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatg 225  Q
    ||||||| | |||||| |||| |||| |||||||||||||||||||||||    
T  35682793 aggtttgtgcacgatttttaacgaaaagattaattgtgttgatttcaatg 35682842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 52429479 - 52429422
Alignment:
Q  171 gtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||||||||| | |||||||| ||||||||||||||||  ||||||| | ||||||    
T  52429479 gtttaaggtttgtgcacgattatgaaggaaatgattaatttggttgattacgatggta 52429422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 1138701 - 1138597
Alignment:
Q  1 ctaagccagaacaaaactctgtatggacttaccctccaaaattggcatcagagggaatcaaacatgagatcgtgataggagcacactccacgatcttaag 100  Q
    ||||| |||| |||| ||||||||||||||  || || |||||||||  |||| || || ||| | ||| | ||| |||||||||||||| ||||| |||    
T  1138701 ctaagtcagagcaaagctctgtatggacttgtccaccgaaattggcactagagagattcgaacctaagaccttgagaggagcacactccaagatctcaag 1138602  T
Q  101 ccaac 105  Q
    |||||    
T  1138601 ccaac 1138597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 1486540 - 1486472
Alignment:
Q  1 ctaagccagaacaaaactctgtatggacttaccctccaaaattggcatcagagggaatcaaacatgaga 69  Q
    ||||| |||| |||| ||||||||||||||||||  | ||||||||| || |||||||| ||| |||||    
T  1486540 ctaagtcagagcaaagctctgtatggacttacccatcgaaattggcaccaaagggaatcgaacctgaga 1486472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 220
Target Start/End: Original strand, 13579621 - 13579653
Alignment:
Q  188 gattattaaggaaatgattaattgtgttgattt 220  Q
    ||||||||| |||||||||||||||||||||||    
T  13579621 gattattaaagaaatgattaattgtgttgattt 13579653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 2e-26; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 144 - 228
Target Start/End: Complemental strand, 28103902 - 28103818
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||| ||||||||||||||||| || |||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||    
T  28103902 tactccctccgtctcacaatatttgtcgtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggta 28103818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 151 - 228
Target Start/End: Complemental strand, 22738863 - 22738786
Alignment:
Q  151 tccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||||||||||||||||| |||||||||||  | ||||||||||| ||||||||||||||||| |||||||||||||    
T  22738863 tccgtctcacaatattagtcgtttaaggtttatgcacgattattaaagaaatgattaattgtgtagatttcaatggta 22738786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 34100514 - 34100587
Alignment:
Q  151 tccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaat 224  Q
    ||||||||||||||||||||||||||| ||||   |||||||||||| ||||||||||||||||||||||||||    
T  34100514 tccgtctcacaatattagttgtttaagatttgtcaacgattattaagaaaatgattaattgtgttgatttcaat 34100587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 144 - 228
Target Start/End: Complemental strand, 5524549 - 5524465
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||| |||| |||||||||||| || |||||| ||||| | |||||||||||| ||||||||||||||||||||||||||||||    
T  5524549 tactccctccatctcacaatatttgtcgtttaaagtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggta 5524465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 8592407 - 8592483
Alignment:
Q  151 tccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggt 227  Q
    ||||||||||||||||||  |||||||||||| | | ||||||||| ||||||||||||||||||||||||||||||    
T  8592407 tccgtctcacaatattagccgtttaaggtttgtgcatgattattaaagaaatgattaattgtgttgatttcaatggt 8592483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 144 - 228
Target Start/End: Original strand, 11373388 - 11373472
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||| |||||| ||||||||||||| |||||||| ||| | |||||||||||||||||| ||||||||||||||||| ||||||    
T  11373388 tactccctccgtttcacaatattagtcgtttaaggattgtgcacgattattaaggaaatgtttaattgtgttgatttcgatggta 11373472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 150 - 228
Target Start/End: Original strand, 7457387 - 7457465
Alignment:
Q  150 ctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||||||||||||||||||| ||||| ||||| | |||||||||||  |||||||||||| |||||||||||||||||    
T  7457387 ctccgtctcacaatattagttatttaatgtttgtgcacgattattaaaaaaatgattaattatgttgatttcaatggta 7457465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 166 - 228
Target Start/End: Complemental strand, 26974176 - 26974114
Alignment:
Q  166 tagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  26974176 tagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggta 26974114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 7463382 - 7463301
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatg 225  Q
    ||||| |||||||||  ||||||||| |||||||| ||| | ||| ||||||||||||||||||||||||||||||||||||    
T  7463382 tactccctccgtctcgtaatattagtcgtttaaggattgtgcacggttattaaggaaatgattaattgtgttgatttcaatg 7463301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 144 - 228
Target Start/End: Complemental strand, 44180374 - 44180290
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||||||||||||  |||| |||| |||||||||||    |||||||||||| ||||||||||||||||||||||||||||||    
T  44180374 tactctctccgtctctaaataatagtcgtttaaggtttatacacgattattaagaaaatgattaattgtgttgatttcaatggta 44180290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 2459621 - 2459554
Alignment:
Q  161 aatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||||||| |||||| ||||| | |||||||||||||||||||||||||||||||||||||| ||||    
T  2459621 aatattagtcgtttaatgtttgtgcacgattattaaggaaatgattaattgtgttgatttcaacggta 2459554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 169 - 228
Target Start/End: Complemental strand, 33819358 - 33819299
Alignment:
Q  169 ttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||    
T  33819358 ttgtttaaggttaatgtacgattattaaggaaatgattaattgtgttgatttcaatggta 33819299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 156 - 228
Target Start/End: Original strand, 21350600 - 21350669
Alignment:
Q  156 ctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||||||||||| |||||||||||| | |||||||||||||||   |||||||||||||||||||||||||    
T  21350600 ctcacaatattagtcgtttaaggtttgtgcacgattattaaggaa---attaattgtgttgatttcaatggta 21350669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 166 - 228
Target Start/End: Original strand, 32346034 - 32346096
Alignment:
Q  166 tagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||||||||||||||| ||||| ||||||||||||| ||| |||||||||||||||||||||    
T  32346034 tagttgtttaaggtttgtgtacggttattaaggaaataattgattgtgttgatttcaatggta 32346096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 34947670 - 34947585
Alignment:
Q  143 ttactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||| |||||||||  |||| |||| |||||||||||| | | | ||||||| |||||||||||||||||||||||||||||||    
T  34947670 ttactccctccgtctctaaataatagtcgtttaaggtttgtgcatgtttattaaagaaatgattaattgtgttgatttcaatggta 34947585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 144 - 228
Target Start/End: Complemental strand, 23670654 - 23670571
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||| |||||||||||||||||| | |||||||||||| | || |||||||||| ||| |||||||||||||||||| ||||||    
T  23670654 tactccctccgtctcacaatattaatcgtttaaggtttgtgcacaattattaagggaat-attaattgtgttgatttccatggta 23670571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 17 - 124
Target Start/End: Original strand, 12211626 - 12211733
Alignment:
Q  17 ctctgtatggacttaccctccaaaattggcatcagagggaatcaaacatgagatcgtgataggagcacactccacgatcttaagccaacgagtagaccaa 116  Q
    ||||||||||||||  ||  | ||||||||| |||||| |||||||| ||||||| ||| |||||||||||||| |||| ||||||||| | ||| ||||    
T  12211626 ctctgtatggacttgtccatcgaaattggcaccagaggaaatcaaacctgagatcttgagaggagcacactccaagatcctaagccaaccactaggccaa 12211725  T
Q  117 ccctaaat 124  Q
    ||| ||||    
T  12211726 ccccaaat 12211733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 150 - 228
Target Start/End: Original strand, 29835380 - 29835458
Alignment:
Q  150 ctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||||||| |||||||| | |||||||||||| |  || ||||||||||||||||||||| ||||||||| |||||||    
T  29835380 ctccgtctcgcaatattaatcgtttaaggtttgtgcgcgcttattaaggaaatgattaattatgttgatttaaatggta 29835458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 9786150 - 9786081
Alignment:
Q  151 tccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    ||||||||  |||| |||| ||||||||| || | |||||||||||||||||||||||||||||||||||    
T  9786150 tccgtctctaaataatagtcgtttaaggtctgtgcacgattattaaggaaatgattaattgtgttgattt 9786081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 28647094 - 28647001
Alignment:
Q  2 taagccagaacaaaactctgtatggacttaccctccaaaattggcatcagagggaatcaaacatgagatcgtgataggagcacactccacgatc 95  Q
    ||||||||| ||||||||||||| ||||| ||| || ||||||||| ||||||||||| ||| ||||| | ||| || ||||||||||| ||||    
T  28647094 taagccagagcaaaactctgtattgacttgcccaccgaaattggcaccagagggaatcgaacctgagaccttgagagaagcacactccaagatc 28647001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 30866109 - 30866052
Alignment:
Q  171 gtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||||||||| | ||||||||||| |||||||||||||||||| ||||||||||||    
T  30866109 gtttaaggtttgtgcacgattattaaagaaatgattaattgtgttaatttcaatggta 30866052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 220
Target Start/End: Complemental strand, 83554 - 83478
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    ||||| |||||||||  |||| |||| |||||||||||  | || ||||||||||||||||||||||||||||||||    
T  83554 tactccctccgtctctaaataatagtcgtttaaggtttatgcacaattattaaggaaatgattaattgtgttgattt 83478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 228
Target Start/End: Original strand, 24516249 - 24516333
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||| ||| |||||| ||| ||||| |||||||||||    |||||||||||  ||||||||||||||||||||||||||||||    
T  24516249 tactccctctgtctcataattttagtcgtttaaggtttatacacgattattaataaaatgattaattgtgttgatttcaatggta 24516333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 22696445 - 22696352
Alignment:
Q  1 ctaagccagaacaaaactctgtatggacttaccctccaaaattggcatcagagggaatcaaacatgagatcgtgataggagcacactccacgatc 95  Q
    |||||||||| |||| ||||||||||| |  ||| || ||||||||| ||||||||||||||| ||||| | ||| |||||||||||||| ||||    
T  22696445 ctaagccagagcaaagctctgtatggagtc-cccaccgaaattggcaccagagggaatcaaacctgagaccttgagaggagcacactccaagatc 22696352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 224
Target Start/End: Complemental strand, 16904549 - 16904468
Alignment:
Q  143 ttactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaat 224  Q
    |||||||||  |||||| |||| |||| |||||||||||| | |  ||| ||||| ||||||||||||||||||||||||||    
T  16904549 ttactctctatgtctcaaaataatagtcgtttaaggtttgtgcaaaatttttaagaaaatgattaattgtgttgatttcaat 16904468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 172 - 224
Target Start/End: Complemental strand, 12631446 - 12631394
Alignment:
Q  172 tttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaat 224  Q
    ||||||||||| | ||||||||||||||||| ||||||||| |||||||||||    
T  12631446 tttaaggtttgtgcacgattattaaggaaataattaattgtattgatttcaat 12631394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 220
Target Start/End: Complemental strand, 46211600 - 46211524
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    ||||| ||||||||   |||| |||| |||||||||||  | || ||||||||||||||||||||||||||||||||    
T  46211600 tactccctccgtctttaaataatagtcgtttaaggtttatgcacaattattaaggaaatgattaattgtgttgattt 46211524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 2850863 - 2850922
Alignment:
Q  166 tagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatg 225  Q
    |||| ||||| |||||| | | ||||||||||||||||||||||| ||||||||||||||    
T  2850863 tagtcgtttatggtttgtgcatgattattaaggaaatgattaattatgttgatttcaatg 2850922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 41506054 - 41506109
Alignment:
Q  173 ttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||||||  | |||||||||||||||||||||||||||||| |||| |||||||    
T  41506054 ttaaggtttatgcacgattattaaggaaatgattaattgtgttaattttaatggta 41506109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 3178186 - 3178240
Alignment:
Q  166 tagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    ||||||||||||||||| | | |||||||||| |||||||| |||||||||||||    
T  3178186 tagttgtttaaggtttgtgcatgattattaagtaaatgattgattgtgttgattt 3178240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 21759966 - 21760020
Alignment:
Q  166 tagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    |||| |||||||||||| | | |||||||||| ||||||||||||||||||||||    
T  21759966 tagtcgtttaaggtttgtgcatgattattaagaaaatgattaattgtgttgattt 21760020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 23330815 - 23330901
Alignment:
Q  2 taagccagaacaaaactctgtatggacttaccctccaaaattggcatcagagggaatcaaacatgagatcgtgataggagcacactc 88  Q
    ||||||||| |||| |||||||||||||| ||| || ||||||||| | |||||| || ||| ||||| | ||| ||||||||||||    
T  23330815 taagccagagcaaagctctgtatggacttgcccaccgaaattggcaccggagggagtcgaacctgagaccttgagaggagcacactc 23330901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 124
Target Start/End: Original strand, 8435772 - 8435893
Alignment:
Q  3 aagccagaacaaaactctgtatggacttaccctccaaaattggcatcagagggaatcaaacatgagatcgtgataggagcacactccacgatcttaagcc 102  Q
    |||||| |||||| || ||||||||||| ||| || ||||||||| |||||| |||| ||| | ||||| | | ||||||| |||||| ||||  ||| |    
T  8435772 aagccaaaacaaagctttgtatggacttgcccaccgaaattggcaccagaggaaatcgaacctaagatcttcaaaggagcaaactccaagatcccaagtc 8435871  T
Q  103 aacgagtagaccaaccctaaat 124  Q
    ||| | ||||||||||| ||||    
T  8435872 aaccactagaccaaccccaaat 8435893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 13962100 - 13962047
Alignment:
Q  172 tttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatg 225  Q
    ||||||||||  | ||| ||||||||||||||||||||||||||||||| ||||    
T  13962100 tttaaggtttatgcacgtttattaaggaaatgattaattgtgttgattttaatg 13962047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 19271709 - 19271774
Alignment:
Q  160 caatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatg 225  Q
    |||| ||||| |||||| | ||| | |||||||||||  |||||||||||||||||||||||||||    
T  19271709 caatgttagtcgtttaatgcttgtgcacgattattaaaaaaatgattaattgtgttgatttcaatg 19271774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 21390437 - 21390388
Alignment:
Q  171 gtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    |||||||||||  | |||||||||||||||||||||||||||||| ||||    
T  21390437 gtttaaggtttatgcacgattattaaggaaatgattaattgtgttaattt 21390388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 28202276 - 28202345
Alignment:
Q  151 tccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    ||||||||  |||| ||||||||||||||||  | ||| |||||||| |||| |||||||||||||||||    
T  28202276 tccgtctctaaataatagttgtttaaggtttatgcacggttattaagaaaataattaattgtgttgattt 28202345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 44424297 - 44424228
Alignment:
Q  151 tccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    ||||||||  |||| |||| ||||||||||   | ||| |||||||||||||||||||||||||||||||    
T  44424297 tccgtctctaaataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattt 44424228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 759079 - 759127
Alignment:
Q  172 tttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    ||||||||||  | || ||||||||||||||||||||||||||||||||    
T  759079 tttaaggtttatgcacaattattaaggaaatgattaattgtgttgattt 759127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 220
Target Start/End: Original strand, 16560530 - 16560606
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    ||||| |||||||||  |||| ||||  |||||| |||  | |||||||||||||||||||||||||||||| ||||    
T  16560530 tactccctccgtctctaaataatagtcatttaagatttatgcacgattattaaggaaatgattaattgtgtttattt 16560606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 220
Target Start/End: Complemental strand, 16605132 - 16605056
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    ||||| |||||||||  |||| ||||  |||||| |||  | |||||||||||||||||||||||||||||| ||||    
T  16605132 tactccctccgtctctaaataatagtcatttaagatttatgcacgattattaaggaaatgattaattgtgtttattt 16605056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 220
Target Start/End: Complemental strand, 42935830 - 42935754
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    |||||| ||||||||  |||| |||| ||||||||||   | ||| |||||||| ||||||||||||||||||||||    
T  42935830 tactctatccgtctctaaataatagtcgtttaaggttgatgcacggttattaagaaaatgattaattgtgttgattt 42935754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 220
Target Start/End: Complemental strand, 48608987 - 48608955
Alignment:
Q  188 gattattaaggaaatgattaattgtgttgattt 220  Q
    |||||||||||||||||||||||||||||||||    
T  48608987 gattattaaggaaatgattaattgtgttgattt 48608955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 206
Target Start/End: Complemental strand, 34636013 - 34635958
Alignment:
Q  151 tccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgatt 206  Q
    |||||||| |||||||||   ||||||||||| | |||||||||||||||||||||    
T  34636013 tccgtctctcaatattagccatttaaggtttgtgcacgattattaaggaaatgatt 34635958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 40076467 - 40076408
Alignment:
Q  161 aatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    |||| |||| |||||||||||  | ||||||||||| |||||||||||||||||| ||||    
T  40076467 aataatagtcgtttaaggtttatgcacgattattaaagaaatgattaattgtgttaattt 40076408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 35476467 - 35476421
Alignment:
Q  1 ctaagccagaacaaaactctgtatggacttaccctccaaaattggca 47  Q
    |||||||||| |||| ||||||||| |||||||| ||||||||||||    
T  35476467 ctaagccagagcaaagctctgtatgaacttacccaccaaaattggca 35476421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 129
Target Start/End: Complemental strand, 2751382 - 2751269
Alignment:
Q  17 ctctgtatggactta-ccctccaaaattggcatcagagggaatcaaacatgagatcgtgataggagcacactccacgatcttaagccaacgagtagacca 115  Q
    ||||||||||||||| ||| || ||||||||| ||||||||||| ||| ||||| | |   ||||||| |||||| ||||  |||||||| | ||| |||    
T  2751382 ctctgtatggacttagcccaccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggcca 2751283  T
Q  116 accctaaattggtt 129  Q
    |||| |||| ||||    
T  2751282 accccaaatgggtt 2751269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 21217923 - 21217976
Alignment:
Q  17 ctctgtatggactta-ccctccaaaattggcatcagagggaatcaaacatgaga 69  Q
    ||||||||||||||| ||| || ||||||||||||||||||||| ||| |||||    
T  21217923 ctctgtatggacttagcccaccgaaattggcatcagagggaatcgaacctgaga 21217976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 38391890 - 38391841
Alignment:
Q  171 gtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    |||||||||||  | || ||||||||| ||||||||||||||||||||||    
T  38391890 gtttaaggtttatgcacaattattaagaaaatgattaattgtgttgattt 38391841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 124
Target Start/End: Complemental strand, 21835262 - 21835154
Alignment:
Q  17 ctctgtatggactta-ccctccaaaattggcatcagagggaatcaaacatgagatcgtgataggagcacactccacgatcttaagccaacgagtagacca 115  Q
    ||||||||||||||| ||| || ||||||||| ||||||||||| ||| |||||||     ||||||| |||||| ||||  |||||||| | |||  ||    
T  21835262 ctctgtatggacttagcccaccgaaattggcaccagagggaatcgaacctgagatctctggaggagcaaactccaagatcccaagccaaccactaggtca 21835163  T
Q  116 accctaaat 124  Q
    |||||||||    
T  21835162 accctaaat 21835154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 32018712 - 32018752
Alignment:
Q  184 gtacgattattaaggaaatgattaattgtgttgatttcaat 224  Q
    |||||||| |||| ||||||| |||||||||||||||||||    
T  32018712 gtacgatttttaatgaaatgaataattgtgttgatttcaat 32018752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 32018915 - 32018951
Alignment:
Q  184 gtacgattattaaggaaatgattaattgtgttgattt 220  Q
    |||||||| |||| |||||||||||||||||||||||    
T  32018915 gtacgatttttaatgaaatgattaattgtgttgattt 32018951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 207
Target Start/End: Complemental strand, 36790916 - 36790852
Alignment:
Q  143 ttactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgatta 207  Q
    |||||| |||||||||  |||| |||| |||||||||||  | ||| ||||||||||||||||||    
T  36790916 ttactccctccgtctctaaataatagtcgtttaaggtttatgcacggttattaaggaaatgatta 36790852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 49101807 - 49101759
Alignment:
Q  172 tttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    |||||||||||  ||||||| ||||| ||||||||||||||||| ||||    
T  49101807 tttaaggtttgtttacgatttttaagaaaatgattaattgtgtttattt 49101759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 151 - 225
Target Start/End: Complemental strand, 50359 - 50285
Alignment:
Q  151 tccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatg 225  Q
    ||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||| |||||||||    
T  50359 tccgtctcacaatattagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttaatttcaatg 50285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 23142830 - 23142745
Alignment:
Q  143 ttactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||| ||||||||||||||||||||| ||||||||||    |||||||||||| ||||||||||||||||||||||||||||||    
T  23142830 ttactccctccgtctcacaatattagttatttaaggtttatccacgattattaagaaaatgattaattgtgttgatttcaatggta 23142745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 3720201 - 3720273
Alignment:
Q  152 ccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaat 224  Q
    |||||||||||||||||| |||||||||||| | ||||||||||| |||||||||||||||||||||||||||    
T  3720201 ccgtctcacaatattagtcgtttaaggtttgtgcacgattattaatgaaatgattaattgtgttgatttcaat 3720273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 144 - 228
Target Start/End: Original strand, 31894162 - 31894246
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||| |||||||||||||||||| | ||||||| |||| ||| |||||||||| ||||||||||||||||||||||||||||||    
T  31894162 tactccctccgtctcacaatattaatcgtttaagatttgtgtatgattattaagaaaatgattaattgtgttgatttcaatggta 31894246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 142 - 228
Target Start/End: Complemental strand, 15058281 - 15058195
Alignment:
Q  142 gttactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||||| ||| ||||| |||||||||| |||||||||||| | |||||||||||| ||||||||||||  ||| ||||||||||||    
T  15058281 gttactccctctgtctcgcaatattagtcgtttaaggtttgtgcacgattattaagaaaatgattaattaagttaatttcaatggta 15058195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 13909558 - 13909502
Alignment:
Q  172 tttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||| ||||| | ||||||||||||||||||||||| |||||||||||||||||||    
T  13909558 tttaaagtttgtgcacgattattaaggaaatgattaaatgtgttgatttcaatggta 13909502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 34639411 - 34639487
Alignment:
Q  151 tccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggt 227  Q
    ||||||||||||||||| | |||| |||||||   ||||||| ||||||||| |||||||||||| |||||||||||    
T  34639411 tccgtctcacaatattaatcgtttgaggtttgtacacgattaataaggaaataattaattgtgttaatttcaatggt 34639487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 181708 - 181638
Alignment:
Q  153 cgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaat 224  Q
    ||||||||||||||||| || ||||||||||| |||||||||||  |||| ||||||||| |||||||||||    
T  181708 cgtctcacaatattagtcgtctaaggtttgagcacgattattaaaaaaat-attaattgtattgatttcaat 181638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 228
Target Start/End: Original strand, 3291737 - 3291804
Alignment:
Q  161 aatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||| |||| |||||||||||  | ||||||||||||||||||||||||||| | ||||| |||||||    
T  3291737 aataatagtcgtttaaggtttttgcacgattattaaggaaatgattaattgtatcgattttaatggta 3291804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 10377836 - 10377710
Alignment:
Q  2 taagccagaacaaaactctgtatggacttaccctccaaaattggcatcagagggaatcaaacatgagatcgtgataggagcacactccacgatcttaagc 101  Q
    |||| |||| |||| || ||||||||||| ||| || ||||||||| || |||||||  ||| ||||| | ||| | |||||||||||| ||||| ||||    
T  10377836 taagtcagagcaaagctatgtatggacttgcccaccgaaattggcaccatagggaattgaacctgagaccttgacatgagcacactccaagatctcaagc 10377737  T
Q  102 caacgagtagaccaaccctaaattggt 128  Q
    |||| | | | ||||||| ||||||||    
T  10377736 caacaactgggccaaccccaaattggt 10377710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 228
Target Start/End: Complemental strand, 13087650 - 13087608
Alignment:
Q  186 acgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||||||||| || |||||||||||||||||||||||||||    
T  13087650 acgattattaagaaagtgattaattgtgttgatttcaatggta 13087608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 220
Target Start/End: Original strand, 27448114 - 27448184
Alignment:
Q  150 ctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    |||||||||  |||| || | |||||||||||  | || ||||||||||||||||||||||||||||||||    
T  27448114 ctccgtctctaaataataatcgtttaaggtttttgcacaattattaaggaaatgattaattgtgttgattt 27448184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 1781965 - 1781880
Alignment:
Q  143 ttactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||| || || |||||||||| | | |||||||||||  | |||||| ||||| |||||||||||| ||||||| |||||||||    
T  1781965 ttactcccttcgactcacaatatcactcgtttaaggtttatgcacgattgttaagaaaatgattaattatgttgatctcaatggta 1781880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 7920373 - 7920316
Alignment:
Q  171 gtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||||| |||| | |||||| |||| ||||||||||||| |||||||||||||||||    
T  7920373 gtttaagatttgtgcacgatttttaaagaaatgattaattttgttgatttcaatggta 7920316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 129
Target Start/End: Complemental strand, 9208358 - 9208246
Alignment:
Q  17 ctctgtatggacttaccctccaaaattggcatcagagggaatcaaacatgagatcgtgataggagcacactccacgatcttaagccaacgagtagaccaa 116  Q
    |||||||||||||| ||| || ||||||||| ||| ||||||| ||| ||||| | ||| ||||||| |||||| ||||  || ||||| | |||| |||    
T  9208358 ctctgtatggacttgcccaccgaaattggcaccagggggaatcgaacctgagaccttgagaggagcaaactccaagatcccaatccaaccactagaacaa 9208259  T
Q  117 ccctaaattggtt 129  Q
    ||| |||| ||||    
T  9208258 ccccaaatgggtt 9208246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 220
Target Start/End: Original strand, 11655898 - 11655974
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    ||||| |||||||||  ||||  ||| |||||||||||  | ||| |||||||| ||||||||||||||||||||||    
T  11655898 tactccctccgtctctaaataagagtcgtttaaggtttatgcacggttattaagaaaatgattaattgtgttgattt 11655974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 220
Target Start/End: Complemental strand, 29363468 - 29363392
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    ||||| ||||||||   |||| |||| |||||||||||  | || ||||||||| ||||||||||||||||||||||    
T  29363468 tactccctccgtctttaaataatagtcgtttaaggtttatgcacaattattaagaaaatgattaattgtgttgattt 29363392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 220
Target Start/End: Original strand, 32440597 - 32440673
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    ||||| |||||||||  |||| |||| ||||||| |||  | ||| ||||| |||||||||||||||||||||||||    
T  32440597 tactccctccgtctctaaataatagtcgtttaagatttatgcacggttatttaggaaatgattaattgtgttgattt 32440673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 21010322 - 21010263
Alignment:
Q  161 aatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    |||| ||||||||||||||||  | || ||||||||| ||||||||||||||||| ||||    
T  21010322 aataatagttgtttaaggtttatgcacaattattaagaaaatgattaattgtgttaattt 21010263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 220
Target Start/End: Original strand, 27367392 - 27367464
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    ||||| |||||||||||||||||||||   |    |||| | ||||||||||| |||||||||||||||||||||||    
T  27367392 tactccctccgtctcacaatattagttcgct----tttgtgcacgattattaaagaaatgattaattgtgttgattt 27367464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 220
Target Start/End: Original strand, 27457739 - 27457811
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    ||||| |||||||||||||||||||||   |    |||| | ||||||||||| |||||||||||||||||||||||    
T  27457739 tactccctccgtctcacaatattagttcgct----tttgtgcacgattattaaagaaatgattaattgtgttgattt 27457811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 17149547 - 17149625
Alignment:
Q  17 ctctgtatggacttaccctccaaaattggcatcagagggaatcaaacatgagatcgtgataggagcacactccacgatc 95  Q
    |||||||||||||| ||  || ||||| ||| ||||||||||| ||| ||||| | ||| |||||||||||||| ||||    
T  17149547 ctctgtatggacttgccaaccgaaattagcaccagagggaatcgaacctgagaccttgagaggagcacactccaagatc 17149625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 7072295 - 7072238
Alignment:
Q  171 gtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||||||||| |||  ||| ||||| |||| ||||||||||||||||| |||||||    
T  7072295 gtttaaggtttgtgtataatttttaagaaaataattaattgtgttgattttaatggta 7072238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 15360188 - 15360301
Alignment:
Q  17 ctctgtatggactta-ccctccaaaattggcatcagagggaatcaaacatgagatcgtgataggagcacactccacgatcttaagccaacgagtagacca 115  Q
    ||||||||||||||| ||| || ||||||||| ||||||||||| ||| ||||| | |   ||||||| |||||| ||||  |||||||| | ||| |||    
T  15360188 ctctgtatggacttagcccaccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggcca 15360287  T
Q  116 accctaaattggtt 129  Q
    |||| |||| ||||    
T  15360288 accccaaatgggtt 15360301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 24983444 - 24983485
Alignment:
Q  187 cgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||| ||||||||||||||| ||| ||||||||||||||||    
T  24983444 cgattcttaaggaaatgattagttgagttgatttcaatggta 24983485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 225
Target Start/End: Original strand, 1063604 - 1063636
Alignment:
Q  193 ttaaggaaatgattaattgtgttgatttcaatg 225  Q
    ||||| |||||||||||||||||||||||||||    
T  1063604 ttaagaaaatgattaattgtgttgatttcaatg 1063636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 220
Target Start/End: Original strand, 6834321 - 6834397
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    ||||| |||||| ||  |||| ||||| ||||| ||||  | |||||||||||| |||| |||||||||||||||||    
T  6834321 tactccctccgtttctaaataatagttctttaaagtttatgcacgattattaagaaaataattaattgtgttgattt 6834397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 15582389 - 15582361
Alignment:
Q  200 aatgattaattgtgttgatttcaatggta 228  Q
    |||||||||||||||||||||||||||||    
T  15582389 aatgattaattgtgttgatttcaatggta 15582361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 150 - 225
Target Start/End: Complemental strand, 16254 - 16179
Alignment:
Q  150 ctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatg 225  Q
    |||||||||||||||||||| ||||||| ||||   ||||||||||||||||||||||||||||||||||| ||||    
T  16254 ctccgtctcacaatattagtagtttaagatttgttcacgattattaaggaaatgattaattgtgttgattttaatg 16179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 150 - 224
Target Start/End: Original strand, 33978 - 34052
Alignment:
Q  150 ctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaat 224  Q
    ||||||||||||||||||||  ||||||||||| | ||||||||||||||||||||||||||| |||| ||||||    
T  33978 ctccgtctcacaatattagtcatttaaggtttgtgcacgattattaaggaaatgattaattgtattgaattcaat 34052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 159 - 228
Target Start/End: Complemental strand, 17182 - 17113
Alignment:
Q  159 acaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||||||||| |||||||||||| | | |||||||||| ||||||||||||||||||||||||||||||    
T  17182 acaatattagtcgtttaaggtttgtgcatgattattaagaaaatgattaattgtgttgatttcaatggta 17113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 143 - 228
Target Start/End: Original strand, 135989 - 136074
Alignment:
Q  143 ttactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||| |||||||||||||||||||| ||||||| |||  | |||||||||||  |||||||||||  |||||||||||||||||    
T  135989 ttactccctccgtctcacaatattagtcgtttaagatttatgcacgattattaaataaatgattaataatgttgatttcaatggta 136074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 166 - 228
Target Start/End: Original strand, 252504 - 252566
Alignment:
Q  166 tagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||| |||||||||||| ||| ||||||||| ||||||||||||| ||||||||| |||||||    
T  252504 tagtcgtttaaggtttgcgtatgattattaaagaaatgattaattatgttgattttaatggta 252566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 220
Target Start/End: Complemental strand, 39244 - 39174
Alignment:
Q  150 ctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    |||||||||  |||| || | |||||||||||  | || ||||||||||||||||||||||||||||||||    
T  39244 ctccgtctctaaataataatcgtttaaggtttttgcacaattattaaggaaatgattaattgtgttgattt 39174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0470 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 228
Target Start/End: Complemental strand, 1147 - 1063
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||| |||| ||| ||||||||||| ||||||| |||    |||||||||||  |||||||||||| |||||||||||||||||    
T  1147 tactccctccatcttacaatattagtcgtttaagatttacacacgattattaaaaaaatgattaattatgttgatttcaatggta 1063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 84368 - 84424
Alignment:
Q  146 ctctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaat 202  Q
    |||| ||||||||||||||||||| |||||||||||| | |||||||||||| ||||    
T  84368 ctctatccgtctcacaatattagtcgtttaaggtttgtgcacgattattaagcaaat 84424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0583 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 2187 - 2106
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatg 225  Q
    ||||| |||||||||  ||||  ||| ||||||||||   | ||||||||||||||| |||||||||||||| |||||||||    
T  2187 tactccctccgtctctaaataaaagtcgtttaaggttcatgcacgattattaaggaagtgattaattgtgttaatttcaatg 2106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 228
Target Start/End: Complemental strand, 105802 - 105762
Alignment:
Q  188 gattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    |||||||||| ||||||||||||||||| ||||||||||||    
T  105802 gattattaagtaaatgattaattgtgtttatttcaatggta 105762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 228
Target Start/End: Complemental strand, 143988 - 143908
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||| |||||||||||||||||| | ||||||||||| | |      ||||||||||| ||||||||||||||| |||||||||    
T  143988 tactccctccgtctcacaatattaatagtttaaggttttactca----attaaggaaataattaattgtgttgatatcaatggta 143908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 225
Target Start/End: Complemental strand, 6876 - 6818
Alignment:
Q  167 agttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatg 225  Q
    |||||||||||||||| |   |||| |||||||||||||||||||| || |||||||||    
T  6876 agttgtttaaggtttgtgcgtgatttttaaggaaatgattaattgttttaatttcaatg 6818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 123146 - 123196
Alignment:
Q  21 gtatggacttaccctccaaaattggcatcagagggaatcaaacatgagatc 71  Q
    |||||||||| ||| || ||||||||| ||||||||||| |||||||||||    
T  123146 gtatggacttgcccaccgaaattggcaacagagggaatcgaacatgagatc 123196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 5172 - 5285
Alignment:
Q  17 ctctgtatggactta-ccctccaaaattggcatcagagggaatcaaacatgagatcgtgataggagcacactccacgatcttaagccaacgagtagacca 115  Q
    ||||||||||||||| ||| || ||||||||| ||||||||||| ||| ||||| | |   ||||||| |||||| ||||  |||||||| | ||| |||    
T  5172 ctctgtatggacttagcccaccgaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggcca 5271  T
Q  116 accctaaattggtt 129  Q
    |||| |||| ||||    
T  5272 accccaaatgggtt 5285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 6260 - 6313
Alignment:
Q  166 tagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatt 219  Q
    |||| |||||| ||||| | |||||| |||| ||||||||||||||||||||||    
T  6260 tagtcgtttaaagtttgtgcacgatttttaacgaaatgattaattgtgttgatt 6313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 5525 - 5468
Alignment:
Q  171 gtttaaggtttgagtacgattattaaggaaatgattaattgtgttgatttcaatggta 228  Q
    ||||||||||||   | |||||||||| |||||||||| |||||||| ||||||||||    
T  5525 gtttaaggtttgtacatgattattaagaaaatgattaactgtgttgaattcaatggta 5468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 29218 - 29275
Alignment:
Q  2 taagccagaacaaaactctgtatggacttaccctccaaaattggcatcagagggaatc 59  Q
    ||||||||| |||| |||||||||||||||||  || ||| ||||||||| |||||||    
T  29218 taagccagagcaaagctctgtatggacttaccgaccgaaaatggcatcagcgggaatc 29275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1391 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1391
Description:

Target: scaffold1391; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 220
Target Start/End: Original strand, 1770 - 1846
Alignment:
Q  144 tactctctccgtctcacaatattagttgtttaaggtttgagtacgattattaaggaaatgattaattgtgttgattt 220  Q
    ||||| |||||| ||  |||| ||||| ||||| ||||  | |||||||||||| |||| |||||||||||||||||    
T  1770 tactccctccgtttctaaataatagttctttaaagtttatgcacgattattaagaaaataattaattgtgttgattt 1846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University