View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8119_high_8 (Length: 216)
Name: NF8119_high_8
Description: NF8119
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8119_high_8 |
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Alignment Details
Target: chr8 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 11 - 201
Target Start/End: Complemental strand, 18320574 - 18320384
Alignment:
| Q |
11 |
atggtgaggtgatcaagagataaacttgtgttggataaatcatctgcagaactattccattctctatacacatatgttacaataaaattcattcccctag |
110 |
Q |
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| T |
18320574 |
atggtgaggtgatcaagagataaacttgtgttggataaatcatctgcagaactattccattctctatacacatatgttacaataaaattcattcccctag |
18320475 |
T |
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| Q |
111 |
tgataagcaggcagttgttccatctgttccttaaaggccaaggaatcagagatgaattcttaaagcatttaccaataaaactgaattagat |
201 |
Q |
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| T |
18320474 |
tgataagcaggcagttgttccatctgttccttaaaggccaaggaatcagagatgaattcttaaagcatttaccaataaaactgaatcagat |
18320384 |
T |
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