View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8122_low_18 (Length: 239)
Name: NF8122_low_18
Description: NF8122
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8122_low_18 |
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Alignment Details
Target: chr8 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 27771224 - 27771443
Alignment:
| Q |
1 |
tctttgatgaactaacatccattgaacatccttcttcacaagaatcatcttcatcttcattcatattcaacacatcaccaattgaaaaaccattttgaaa |
100 |
Q |
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| T |
27771224 |
tctttgatgaactaacatccattgaacatccttcttcacaagaatcatcttcatcttcattcatattcaacacatcaccaattgaaaaaccattttgaaa |
27771323 |
T |
|
| Q |
101 |
tgaatgatccatagacactgaccttccgatcgattcacaaacttcgtctctaatttcgattattctttctcttccttgcaaattacacaaatcactaaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27771324 |
tgaatgatccatagacactgaccttccgatcgattcacaaacttcgtctctaatttcgattattctttctcttccttgcaaattacacaaatcactaaaa |
27771423 |
T |
|
| Q |
201 |
gcgcgcaatgaaggcgcctt |
220 |
Q |
| |
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||||||||||| |||||||| |
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| T |
27771424 |
gcgcgcaatgatggcgcctt |
27771443 |
T |
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