View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8122_low_8 (Length: 337)
Name: NF8122_low_8
Description: NF8122
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8122_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 289; Significance: 1e-162; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 21 - 321
Target Start/End: Complemental strand, 4512376 - 4512076
Alignment:
| Q |
21 |
gcctgccaaaacaaacaatacaagtcatcgataaggacatagacaatttactagtttgttgttagggaacaattcaaagtgatatcataatgttcaatac |
120 |
Q |
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| T |
4512376 |
gcctgccaaaacaaacaatacaagtcattgataaggacatagacaatttactagtttgttgttagggaacaattcaaagtgatatcataatgttcaatac |
4512277 |
T |
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| Q |
121 |
taaaaatttctgatttattccttgttgtaaaactattaaactctcaaatgtaggggatatgatactcaaattgtaaggacttgcctctccagcaccaagg |
220 |
Q |
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| T |
4512276 |
taaaaatttctgatttattccttgttgtaaaactattaaactctcgaatgtaggggatatgatactcaaattgtaaggacttgcctctccagcaccaagg |
4512177 |
T |
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| Q |
221 |
aacaagaaccggtggtcgcccaagcttcctccaaccaaatttagagctgaaactatccctgcaaggaccactgctgcagttccctgaaacaaagtccata |
320 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4512176 |
aacaagaaccggtggtcgcccaagcttcctccaaccaaatttagagctgaaactattcctgcaaggaccactgctgcagttccctgaaacaaagtccata |
4512077 |
T |
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| Q |
321 |
g |
321 |
Q |
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| T |
4512076 |
g |
4512076 |
T |
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