View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8125_high_7 (Length: 259)
Name: NF8125_high_7
Description: NF8125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8125_high_7 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 34879127 - 34879385
Alignment:
| Q |
1 |
ttgttaccatttcatatctaggcacacattcacattcgtgctactgttctctaatctttaattgctctattccatacaatattgcattaccaagggatat |
100 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34879127 |
ttgttaccatttcatatctaggcccacattcacattcgtgctactgttctctaatctttaattgctctattccatacaatattgcattaccaagggatat |
34879226 |
T |
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| Q |
101 |
aggaagcaaaaactgtcctctaaatttgacatgtctgctgctgtaggagctgtgtctacaaccaaagatgtttccttcaatgctcatttggaggaagagc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34879227 |
aggaagcaaaaactgtcctctaaatttgacatgtctgctgctgtaggagctgtgtctacaaccaaagatgtttccttcaatgctcatttggaggaagagc |
34879326 |
T |
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| Q |
201 |
acaaaaacaaaggaaccaacaaggttggtgtcaactatgatgaagctgaggaaattgtg |
259 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34879327 |
acaaaaacaaaggaaccaacaaggttggtgtcaactatgatgaagctgaggaaattgtg |
34879385 |
T |
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