View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8125_low_13 (Length: 239)

Name: NF8125_low_13
Description: NF8125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8125_low_13
NF8125_low_13
[»] chr5 (43 HSPs)
chr5 (1-223)||(10327903-10328125)
chr5 (1-165)||(32945024-32945188)
chr5 (7-165)||(27196056-27196214)
chr5 (5-170)||(26299824-26299989)
chr5 (5-165)||(10493962-10494122)
chr5 (5-124)||(1225328-1225447)
chr5 (5-158)||(39407383-39407536)
chr5 (73-165)||(5382828-5382920)
chr5 (5-165)||(27450584-27450744)
chr5 (5-170)||(34719655-34719820)
chr5 (5-165)||(41783302-41783462)
chr5 (8-159)||(1840696-1840847)
chr5 (5-127)||(26218024-26218146)
chr5 (5-115)||(34723706-34723816)
chr5 (5-122)||(19716160-19716277)
chr5 (5-170)||(26298288-26298453)
chr5 (31-159)||(34724763-34724891)
chr5 (5-127)||(11136048-11136169)
chr5 (5-165)||(31620845-31621005)
chr5 (23-165)||(1091119-1091260)
chr5 (5-127)||(14500747-14500869)
chr5 (5-114)||(2675993-2676102)
chr5 (5-122)||(20188950-20189067)
chr5 (6-165)||(3801367-3801526)
chr5 (5-115)||(34857324-34857434)
chr5 (78-163)||(31021913-31021998)
chr5 (5-94)||(39409117-39409206)
chr5 (5-154)||(3457803-3457956)
chr5 (78-169)||(39414232-39414323)
chr5 (5-165)||(15933137-15933300)
chr5 (51-163)||(24202725-24202837)
chr5 (78-170)||(24536057-24536149)
chr5 (5-122)||(36523728-36523849)
chr5 (73-164)||(17168447-17168538)
chr5 (8-163)||(19282119-19282274)
chr5 (67-124)||(20190628-20190685)
chr5 (5-129)||(30660946-30661070)
chr5 (10-165)||(27906080-27906235)
chr5 (6-165)||(38522864-38523023)
chr5 (28-94)||(28246732-28246798)
chr5 (91-165)||(28247473-28247547)
chr5 (72-157)||(28431099-28431184)
chr5 (85-165)||(29328100-29328180)
[»] chr4 (54 HSPs)
chr4 (5-165)||(49405638-49405798)
chr4 (5-165)||(48802478-48802639)
chr4 (5-165)||(80474-80634)
chr4 (7-165)||(51407952-51408110)
chr4 (5-165)||(55891988-55892148)
chr4 (5-159)||(12673037-12673191)
chr4 (5-159)||(40797807-40797961)
chr4 (5-165)||(28265676-28265833)
chr4 (5-171)||(46944541-46944707)
chr4 (8-165)||(11055229-11055386)
chr4 (7-109)||(44378229-44378331)
chr4 (21-159)||(51995071-51995209)
chr4 (7-159)||(9222141-9222291)
chr4 (5-126)||(43798265-43798386)
chr4 (5-165)||(19455161-19455321)
chr4 (5-172)||(1803475-1803637)
chr4 (5-127)||(22721305-22721426)
chr4 (21-170)||(13455694-13455843)
chr4 (5-165)||(24007906-24008066)
chr4 (73-164)||(9874212-9874303)
chr4 (5-100)||(25134551-25134646)
chr4 (76-127)||(28470867-28470918)
chr4 (5-119)||(52706194-52706308)
chr4 (5-162)||(36156300-36156457)
chr4 (16-165)||(7505517-7505666)
chr4 (72-133)||(16742371-16742432)
chr4 (9-170)||(22184484-22184645)
chr4 (5-98)||(50710840-50710933)
chr4 (5-105)||(48339162-48339262)
chr4 (12-170)||(56224129-56224287)
chr4 (14-122)||(6866149-6866257)
chr4 (39-159)||(26632947-26633067)
chr4 (78-165)||(9959382-9959468)
chr4 (10-116)||(50137375-50137481)
chr4 (8-165)||(9906359-9906516)
chr4 (5-98)||(25102667-25102760)
chr4 (67-159)||(4274565-4274657)
chr4 (6-162)||(21441559-21441715)
chr4 (6-170)||(53369850-53370014)
chr4 (86-165)||(27891444-27891523)
chr4 (6-112)||(19852956-19853062)
chr4 (12-114)||(52813585-52813687)
chr4 (78-127)||(13761849-13761898)
chr4 (79-124)||(50146962-50147007)
chr4 (6-111)||(50605986-50606091)
chr4 (5-124)||(24550054-24550174)
chr4 (77-165)||(36643988-36644075)
chr4 (78-114)||(38791742-38791778)
chr4 (30-162)||(52733707-52733838)
chr4 (82-165)||(43387311-43387394)
chr4 (80-127)||(43812098-43812145)
chr4 (5-45)||(13008063-13008103)
chr4 (81-165)||(15697086-15697170)
chr4 (27-151)||(48151143-48151267)
[»] chr1 (57 HSPs)
chr1 (5-163)||(31816545-31816703)
chr1 (5-165)||(29677522-29677682)
chr1 (5-159)||(28006327-28006481)
chr1 (5-165)||(39802770-39802930)
chr1 (5-165)||(45581011-45581171)
chr1 (5-155)||(48575093-48575243)
chr1 (5-162)||(7995948-7996105)
chr1 (8-165)||(15306473-15306630)
chr1 (5-165)||(15257174-15257334)
chr1 (5-162)||(47983232-47983389)
chr1 (5-165)||(45653435-45653594)
chr1 (21-165)||(50447334-50447478)
chr1 (27-165)||(24575908-24576046)
chr1 (5-159)||(40159639-40159793)
chr1 (5-170)||(38061176-38061341)
chr1 (5-158)||(5204479-5204632)
chr1 (21-165)||(27076518-27076662)
chr1 (5-165)||(35810695-35810855)
chr1 (79-165)||(7841674-7841759)
chr1 (5-159)||(7956301-7956455)
chr1 (67-165)||(12224578-12224676)
chr1 (5-127)||(19508505-19508627)
chr1 (8-161)||(31869574-31869727)
chr1 (5-165)||(43087469-43087629)
chr1 (5-114)||(42937051-42937160)
chr1 (6-170)||(36419079-36419243)
chr1 (66-165)||(6413277-6413376)
chr1 (8-159)||(23915606-23915757)
chr1 (5-124)||(42916158-42916277)
chr1 (5-124)||(46264988-46265107)
chr1 (6-165)||(47602865-47603024)
chr1 (5-159)||(20349123-20349277)
chr1 (5-122)||(7596370-7596487)
chr1 (5-94)||(40002871-40002960)
chr1 (78-170)||(14101913-14102005)
chr1 (67-159)||(21680665-21680757)
chr1 (5-165)||(25124888-25125048)
chr1 (5-133)||(29113560-29113687)
chr1 (78-165)||(7016078-7016165)
chr1 (6-165)||(24469820-24469979)
chr1 (6-165)||(32179836-32179995)
chr1 (78-165)||(44596567-44596654)
chr1 (9-127)||(13645221-13645339)
chr1 (9-115)||(15662930-15663036)
chr1 (79-164)||(3577722-3577807)
chr1 (55-124)||(15014342-15014411)
chr1 (5-165)||(23916787-23916947)
chr1 (66-164)||(13912395-13912493)
chr1 (79-165)||(36119122-36119208)
chr1 (6-111)||(37441243-37441348)
chr1 (73-165)||(14578588-14578680)
chr1 (79-162)||(30251475-30251559)
chr1 (70-114)||(51432257-51432301)
chr1 (9-115)||(14796569-14796675)
chr1 (9-115)||(14805443-14805549)
chr1 (81-114)||(20904003-20904036)
chr1 (70-114)||(51432192-51432236)
[»] scaffold0223 (1 HSPs)
scaffold0223 (5-165)||(14403-14563)
[»] chr7 (46 HSPs)
chr7 (7-165)||(18249996-18250154)
chr7 (1-171)||(17025358-17025528)
chr7 (6-170)||(21760581-21760745)
chr7 (9-165)||(49034227-49034383)
chr7 (5-163)||(26719797-26719955)
chr7 (5-170)||(33898942-33899107)
chr7 (7-165)||(35543559-35543714)
chr7 (5-170)||(46573610-46573775)
chr7 (5-159)||(18740227-18740381)
chr7 (28-165)||(36472444-36472581)
chr7 (9-165)||(32356947-32357103)
chr7 (5-127)||(45055710-45055832)
chr7 (8-165)||(22075048-22075205)
chr7 (5-165)||(11595799-11595959)
chr7 (6-165)||(7447859-7448018)
chr7 (5-127)||(40480091-40480214)
chr7 (9-127)||(10618907-10619025)
chr7 (6-120)||(30919405-30919519)
chr7 (51-165)||(33019329-33019443)
chr7 (8-126)||(33935493-33935611)
chr7 (5-126)||(29037822-29037943)
chr7 (39-165)||(33124711-33124837)
chr7 (21-164)||(31491813-31491956)
chr7 (78-165)||(41449795-41449882)
chr7 (67-162)||(48634491-48634586)
chr7 (8-165)||(44421904-44422062)
chr7 (6-124)||(45176228-45176346)
chr7 (9-162)||(37334264-37334417)
chr7 (6-159)||(43052855-43053008)
chr7 (6-165)||(36926982-36927141)
chr7 (5-124)||(37401610-37401729)
chr7 (1-111)||(23237574-23237684)
chr7 (6-159)||(5776139-5776292)
chr7 (5-162)||(20400978-20401135)
chr7 (6-111)||(48505845-48505950)
chr7 (91-165)||(6866684-6866758)
chr7 (8-165)||(222229-222386)
chr7 (79-168)||(24128500-24128589)
chr7 (6-111)||(28949815-28949920)
chr7 (14-114)||(17608703-17608803)
chr7 (39-158)||(23227009-23227128)
chr7 (39-158)||(23236162-23236281)
chr7 (6-124)||(42072066-42072184)
chr7 (6-111)||(5794993-5795098)
chr7 (67-124)||(37106870-37106927)
chr7 (1-45)||(23223577-23223621)
[»] chr2 (34 HSPs)
chr2 (5-165)||(40458898-40459058)
chr2 (5-168)||(11006974-11007135)
chr2 (8-165)||(3409191-3409348)
chr2 (5-133)||(2647009-2647137)
chr2 (30-164)||(24844670-24844804)
chr2 (55-165)||(27464575-27464685)
chr2 (5-165)||(30713133-30713293)
chr2 (9-166)||(10412421-10412578)
chr2 (73-165)||(29806951-29807043)
chr2 (5-104)||(1094434-1094533)
chr2 (7-126)||(2328333-2328452)
chr2 (5-124)||(13829855-13829974)
chr2 (8-165)||(44740486-44740643)
chr2 (5-121)||(11027885-11028001)
chr2 (5-126)||(12070556-12070677)
chr2 (5-165)||(27902442-27902601)
chr2 (5-115)||(34116226-34116336)
chr2 (79-124)||(31000891-31000936)
chr2 (67-168)||(41332270-41332371)
chr2 (6-165)||(36538634-36538793)
chr2 (5-127)||(18667728-18667850)
chr2 (76-114)||(20203768-20203806)
chr2 (6-112)||(26436332-26436438)
chr2 (6-172)||(33831473-33831639)
chr2 (53-126)||(28968845-28968918)
chr2 (5-109)||(32713055-32713160)
chr2 (39-163)||(16544017-16544141)
chr2 (67-158)||(17616306-17616397)
chr2 (6-165)||(27634649-27634808)
chr2 (5-124)||(38409615-38409734)
chr2 (6-111)||(34064683-34064788)
chr2 (78-114)||(9963809-9963845)
chr2 (56-164)||(17368994-17369101)
chr2 (55-107)||(17503450-17503502)
[»] scaffold0171 (1 HSPs)
scaffold0171 (19-165)||(21079-21224)
[»] chr6 (19 HSPs)
chr6 (5-165)||(3081721-3081881)
chr6 (9-159)||(17441138-17441289)
chr6 (5-158)||(7437281-7437434)
chr6 (5-165)||(13311999-13312161)
chr6 (8-165)||(1501828-1501985)
chr6 (5-162)||(18099793-18099950)
chr6 (5-114)||(10961850-10961959)
chr6 (1-126)||(18095492-18095617)
chr6 (5-165)||(5640255-5640415)
chr6 (12-159)||(4441310-4441457)
chr6 (5-127)||(33110435-33110557)
chr6 (8-126)||(6999247-6999365)
chr6 (5-102)||(9950826-9950923)
chr6 (80-159)||(11460023-11460102)
chr6 (9-91)||(30774019-30774101)
chr6 (67-122)||(13355414-13355469)
chr6 (67-125)||(10474392-10474449)
chr6 (80-122)||(11703572-11703614)
chr6 (6-111)||(10346699-10346804)
[»] chr3 (34 HSPs)
chr3 (5-165)||(12710679-12710839)
chr3 (5-165)||(30662134-30662294)
chr3 (5-165)||(40943538-40943698)
chr3 (13-165)||(9505124-9505276)
chr3 (5-159)||(20550211-20550365)
chr3 (8-159)||(52934792-52934943)
chr3 (5-140)||(15822377-15822512)
chr3 (27-165)||(26049543-26049681)
chr3 (5-165)||(54393446-54393606)
chr3 (5-165)||(33438734-33438894)
chr3 (25-165)||(52199426-52199566)
chr3 (9-116)||(5418659-5418766)
chr3 (8-127)||(28242563-28242682)
chr3 (5-100)||(54432259-54432354)
chr3 (21-153)||(31589615-31589747)
chr3 (5-145)||(48730860-48731000)
chr3 (6-165)||(32689147-32689306)
chr3 (66-164)||(26136371-26136469)
chr3 (5-162)||(1072715-1072872)
chr3 (5-165)||(46293216-46293376)
chr3 (86-165)||(19560777-19560856)
chr3 (30-165)||(39135356-39135491)
chr3 (5-159)||(39942809-39942963)
chr3 (6-112)||(41609866-41609972)
chr3 (77-158)||(1674678-1674759)
chr3 (5-126)||(18074553-18074674)
chr3 (5-165)||(44574503-44574663)
chr3 (8-115)||(50965383-50965491)
chr3 (8-115)||(51068518-51068626)
chr3 (78-165)||(25253752-25253839)
chr3 (90-165)||(54432180-54432255)
chr3 (67-165)||(39469534-39469632)
chr3 (78-107)||(30743622-30743651)
chr3 (67-124)||(45714735-45714792)
[»] scaffold0444 (1 HSPs)
scaffold0444 (7-109)||(826-928)
[»] scaffold0135 (1 HSPs)
scaffold0135 (7-159)||(32794-32944)
[»] chr8 (19 HSPs)
chr8 (12-126)||(1091711-1091825)
chr8 (8-165)||(3307914-3308071)
chr8 (5-122)||(22563983-22564100)
chr8 (67-159)||(43384833-43384925)
chr8 (5-165)||(43967487-43967647)
chr8 (27-122)||(27189128-27189223)
chr8 (5-127)||(34655012-34655134)
chr8 (68-165)||(39478090-39478187)
chr8 (6-165)||(453461-453620)
chr8 (5-165)||(33279980-33280140)
chr8 (67-162)||(12378391-12378486)
chr8 (6-159)||(11161550-11161703)
chr8 (66-127)||(17865429-17865490)
chr8 (5-44)||(43384811-43384850)
chr8 (5-107)||(9412585-9412687)
chr8 (5-127)||(23181132-23181254)
chr8 (81-122)||(28492707-28492748)
chr8 (5-114)||(34516115-34516224)
chr8 (78-120)||(43955884-43955926)
[»] scaffold0063 (1 HSPs)
scaffold0063 (9-159)||(51311-51461)
[»] scaffold0002 (1 HSPs)
scaffold0002 (5-163)||(96257-96415)
[»] scaffold0204 (1 HSPs)
scaffold0204 (5-105)||(26684-26784)
[»] scaffold0224 (1 HSPs)
scaffold0224 (5-124)||(7352-7471)
[»] scaffold0260 (1 HSPs)
scaffold0260 (5-159)||(11446-11600)
[»] scaffold0263 (1 HSPs)
scaffold0263 (1-122)||(17208-17329)
[»] scaffold0954 (1 HSPs)
scaffold0954 (1-111)||(241-351)
[»] scaffold0025 (1 HSPs)
scaffold0025 (14-163)||(11376-11525)
[»] scaffold0022 (1 HSPs)
scaffold0022 (67-104)||(124545-124582)
[»] scaffold1787 (1 HSPs)
scaffold1787 (5-49)||(28-72)


Alignment Details
Target: chr5 (Bit Score: 167; Significance: 1e-89; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 10327903 - 10328125
Alignment:
Q  1 aacaaaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagt 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| || || |||||||||||||||| |||||    
T  10327903 aacaaaacgagtcgaactatacatagctcaagtttaattcatttatttgtcgagtttaatattcgactcaagtttgattcatttggttcatgaatcaagt 10328002  T
Q  101 tcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagccttaatatagaatcttcttagccaaattacataaat 200  Q
    ||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||| ||| || ||||||||||||||||    
T  10328003 tcaacgaatcaattaccgaatcgagttttgaacaattttcgagttggttcggttcattgtcagccctaatatagaaccttttttgccaaattacataaat 10328102  T
Q  201 taagaaagttggtagtagaaagc 223  Q
    ||| |||||||||||||||||||    
T  10328103 taaaaaagttggtagtagaaagc 10328125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 32945188 - 32945024
Alignment:
Q  1 aacaaaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagt 100  Q
    |||||||||||| ||||||| |||| ||| |||||   ||||||||||| |||||||||| || ||||||| ||||||||||||||||||||||||||||    
T  32945188 aacaaaacgagttgaactatgcataactccagttcggctcatttatttgacgagcttaatttttgactcaagttcgactcatttggttcatgaaccaagt 32945089  T
Q  101 tcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    | ||||||| |||||||||||||||||| |||| |||||| |||| |||||||||||||||||||    
T  32945088 ttaacgaatcaattaccgaatcgagtttcgaactattttcgagttggttcggttcattgtcagcc 32945024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 7 - 165
Target Start/End: Original strand, 27196056 - 27196214
Alignment:
Q  7 acgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacg 106  Q
    ||||||||||  |||| |||||||||||||| || ||||| |  |||||||||| ||| |||||| |||||||||||||||||||||||||| || ||||    
T  27196056 acgagtcgaatcatacttagctcaagttcaactcctttatctaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaaatttaacg 27196155  T
Q  107 aattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    ||| ||||| |||||||||| | |||| |||||| |||| |||||||||||||||||||    
T  27196156 aatcaattatcgaatcgagtctcgaactattttcgagttggttcggttcattgtcagcc 27196214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 170
Target Start/End: Original strand, 26299824 - 26299989
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||| |||  ||| |||||||||||||||||||||  |||||||||| ||  |||||| || |||||||| ||||||||||  ||||||||    
T  26299824 aaacgagtcgaaccatatttagttcaagttcaattcatttatttaacgagcttaattttaaactcaagtttgactcattaggttcatgaatgaagttcaa 26299923  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagccttaat 170  Q
    ||||| ||||| |||||||| | | | || |||||| |||| ||||||||||||  ||||||||||    
T  26299924 cgaatcaattatcgaatcgaatctcgcactattttcgagttggttcggttcatttccagccttaat 26299989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 10493962 - 10494122
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    |||||||||||||||||| ||| |||||||||  ||||||||||  |||||||||| ||| |||||| ||||||||||||||||  ||||||||||||||    
T  10493962 aaacgagtcgaactatacttagttcaagttcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggtttgtgaaccaagttcaa 10494061  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    ||||  |||||  ||||||| | |  ||| |||||  |||| ||||||||||||| |||||    
T  10494062 cgaaccaattattgaatcgaatatcaaactatttttgagttggttcggttcattgccagcc 10494122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 1225328 - 1225447
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    |||||||||||| ||||| ||| ||||||||  |||||||||||| |||||||||| ||| |||||| ||||||||||||||||||| ||| ||||||||    
T  1225328 aaacgagtcgaattatacgtagttcaagttcggttcatttatttgacgagcttaattttcaactcaagttcgactcatttggttcataaactaagttcaa 1225427  T
Q  105 cgaattaattaccgaatcga 124  Q
    ||||  ||||| ||||||||    
T  1225428 cgaaacaattatcgaatcga 1225447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 158
Target Start/End: Original strand, 39407383 - 39407536
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||| |||  ||| |||||||||| ||||||||||  |||||||||| ||  |||||| ||||||||||| |||||||||| |||||||||    
T  39407383 aaacgagtcgaaccatatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaa 39407482  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcatt 158  Q
    ||||| ||||| |||||||| | | | || |||||  |||| ||||||||||||    
T  39407483 cgaatcaattatcgaatcgaatctcgcactatttttgagttggttcggttcatt 39407536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 73 - 165
Target Start/End: Complemental strand, 5382920 - 5382828
Alignment:
Q  73 ttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||| | ||||  |||||||||| |||| ||||||||||||||    
T  5382920 ttcgactcgtttggttcatgaatcaagttcaacgaattaattaccgaatcgagtctcgaactcttttcaagttggttcagttcattgtcagcc 5382828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 27450744 - 27450584
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||| | |  ||| |||||||||| ||||||||||  |||||||||| ||  |||||| ||||||||||| |||||||||| ||| |||||    
T  27450744 aaacgagtcgaaccacatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaatcaaattcaa 27450645  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    ||||| ||||| |||||||| | | | || |||||| |||| ||||||||||||| |||||    
T  27450644 cgaatcaattatcgaatcgaatctcgcactattttcgagttggttcggttcattgccagcc 27450584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 170
Target Start/End: Complemental strand, 34719820 - 34719655
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||| |||  ||| |||||||||| ||||||||||  |||||||||| ||  |||||| |||||||||||  ||||||||| |||||||||    
T  34719820 aaacgagtcgaaccatatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaagttcatgaatcaagttcaa 34719721  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagccttaat 170  Q
    ||||| ||||| |||||| | | | | || |||||| |||| ||||| ||||||| ||||| ||||    
T  34719720 cgaatcaattatcgaatcaaatctcgcactattttcgagttggttcgtttcattgccagccctaat 34719655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 41783302 - 41783462
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||| ||||||||| | ||| ||||||||||| ||||||| ||  ||| |||||| ||   ||||| |||| |||||||||||||||||||||||||||    
T  41783302 aaacgggtcgaactacatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcatttggttcatgaaccaagttcaa 41783401  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    |||| |||||||||| |||||||  ||||  | ||| ||||   |||||||||||||||||    
T  41783402 cgaactaattaccgagtcgagttccgaactttattcgagttgtatcggttcattgtcagcc 41783462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 8 - 159
Target Start/End: Complemental strand, 1840847 - 1840696
Alignment:
Q  8 cgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacga 107  Q
    |||| ||||||||| | | ||||||||||  ||||||||||  ||| |||||| |||  ||||| |||  ||||||||||||||||||||||||||||||    
T  1840847 cgagccgaactatatacatctcaagttcagctcatttatttcacgaacttaattttcagctcaagttcagctcatttggttcatgaaccaagttcaacga 1840748  T
Q  108 attaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattg 159  Q
     ||||||  ||||| ||||| ||||| ||| || |||| |||||||||||||    
T  1840747 gttaattgtcgaattgagttctgaactattgtcgagttggttcggttcattg 1840696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 127
Target Start/End: Original strand, 26218024 - 26218146
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||||||| ||| |||||||| || ||||||| ||  ||| |||||| ||   ||||| |||| ||| |||||||||||||||||||||||    
T  26218024 aaacgagtcgaactatatataactcaagtttaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaa 26218123  T
Q  105 cgaattaattaccgaatcgagtt 127  Q
    |||| |||||||||| |||||||    
T  26218124 cgaactaattaccgagtcgagtt 26218146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 34723816 - 34723706
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||| |||  ||| |||||||||| ||||||||||  |||||||||| ||  |||||| ||||||||||| |||||||||| |||||||||    
T  34723816 aaacgagtcgaaccatatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaaattcgactcattaggttcatgaatcaagttcaa 34723717  T
Q  105 cgaattaatta 115  Q
    ||||| |||||    
T  34723716 cgaatcaatta 34723706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 19716160 - 19716277
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||| ||| |||  ||| |||||||||||||||||||||  |||||||||| ||  ||| || ||||||||||| |||||||||| |||||||||    
T  19716160 aaacgagtcaaaccatatttagttcaagttcaattcatttatttaacgagcttaattttaaacttaagttcgactcattaggttcatgaatcaagttcaa 19716259  T
Q  105 cgaattaattaccgaatc 122  Q
    ||||| ||||| ||||||    
T  19716260 cgaatcaattatcgaatc 19716277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 170
Target Start/End: Original strand, 26298288 - 26298453
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||| |||  ||| | |||||||| ||||||||||  |||||||||| ||  |||||| || |||||||| |||||||||| |||||||||    
T  26298288 aaacgagtcgaaccatatttagtttaagttcaactcatttatttaacgagcttaattttaaactcaagtttgactcattaggttcatgaatcaagttcaa 26298387  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagccttaat 170  Q
    ||||| ||||| |||||||| | |   || |||||  |||| ||||||||||||| ||||| ||||    
T  26298388 cgaatcaattatcgaatcgaatctcacactatttttgagttggttcggttcattgccagccctaat 26298453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 159
Target Start/End: Complemental strand, 34724891 - 34724763
Alignment:
Q  31 agttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttg 130  Q
    ||||||| ||||||||||  |||||||||| ||  |||||| ||||||||||| |||||||||| |||||||||||||| ||||| | |||||| | |      
T  34724891 agttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcaaatcgaatctca 34724792  T
Q  131 aacaattttcaagttcgttcggttcattg 159  Q
     || ||||||||||| |||||||||||||    
T  34724791 cactattttcaagttggttcggttcattg 34724763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 127
Target Start/End: Complemental strand, 11136169 - 11136048
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||||||| ||| ||||||||||| ||||||| ||  ||| |||||| ||   ||||| |||| ||| |||||||| ||||||||||||||    
T  11136169 aaacgagtcgaactatatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttc-tgaaccaagttcaa 11136071  T
Q  105 cgaattaattaccgaatcgagtt 127  Q
    |||| |||||||||| |||||||    
T  11136070 cgaactaattaccgagtcgagtt 11136048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 31620845 - 31621005
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    |||||||||||| ||||  || ||||||||||  ||||||| ||  ||| ||||||||||  || || ||| ||||||| |||||||||||||| |||||    
T  31620845 aaacgagtcgaattatatgtaactcaagttcagctcatttaattaacgaacttaatattcagctgaagttcaactcattaggttcatgaaccaaattcaa 31620944  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
     | | |||||  ||| |||| ||| |||| || |||||||| |||||||||||||||||||    
T  31620945 tggactaattgtcgagtcgaatttcgaactatattcaagttggttcggttcattgtcagcc 31621005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 165
Target Start/End: Original strand, 1091119 - 1091260
Alignment:
Q  23 atagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatc 122  Q
    ||||||||||||||| ||||||||||   || |||| | ||  |||||| |||||| ||||| |||  ||||| |||||||||||||| |||| ||||||    
T  1091119 atagctcaagttcaactcatttatttaatgaacttattttta-actcaagttcgacccatttagtttgtgaactaagttcaacgaattcattatcgaatc 1091217  T
Q  123 gagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    |||| ||||||  |||| ||||| ||||||||||| |||||||    
T  1091218 gagtcttgaactttttttaagttggttcggttcatcgtcagcc 1091260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 127
Target Start/End: Complemental strand, 14500869 - 14500747
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||| ||||| ||| ||||||||||| ||||| | ||  ||| |||||| ||   ||||| |||| ||| |||||||||||||||||||||||    
T  14500869 aaacgagtcgagctatatataactcaagttcaactcattcagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaa 14500770  T
Q  105 cgaattaattaccgaatcgagtt 127  Q
    |||| |||||| ||| |||||||    
T  14500769 cgaactaattatcgagtcgagtt 14500747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 2675993 - 2676102
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    |||||||||||| || | |||| |||||||||||| | ||| ||| ||| |||||| |||  ||||| |||||||||||||||||||||||| ||||| |    
T  2675993 aaacgagtcgaattacatatagttcaagttcaatttaattagttgacgaacttaattttcagctcaagttcgactcatttggttcatgaacctagttcga 2676092  T
Q  105 cgaattaatt 114  Q
    ||||| ||||    
T  2676093 cgaatcaatt 2676102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 20188950 - 20189067
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||||| | ||||||||||||||  ||| ||| ||| ||| |||||| ||    |||| |||| ||||||||||||||||||||||||| |    
T  20188950 aaacgagtcgaactacatatagctcaagttcagctcaattagttgacgaacttaatttttagttcaagttcggctcatttggttcatgaaccaagttcga 20189049  T
Q  105 cgaattaattaccgaatc 122  Q
    ||||| ||||| ||||||    
T  20189050 cgaatcaattatcgaatc 20189067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 165
Target Start/End: Complemental strand, 3801526 - 3801367
Alignment:
Q  6 aacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaac 105  Q
    ||||| |||||| ||  |||| |||||||||| ||||||| ||  ||| |||||| |||  ||||| |||| |||||||||||||||||||||||||||     
T  3801526 aacgaatcgaaccatttatagttcaagttcaactcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcaat 3801427  T
Q  106 gaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    |||  ||||  ||| |||| ||  |||| || ||| |||| ||||||||||||| |||||    
T  3801426 gaaccaattgtcgagtcgaattacgaactatattcgagttggttcggttcattgccagcc 3801367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 34857324 - 34857434
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||| |||  ||| | ||||| || ||||||||||  |||||||||| ||  |||||| ||||||||||| | |||||||| |||||||||    
T  34857324 aaacgagtcgaaccatatttagtttaagtttaactcatttatttaacgagcttaattttaaactcaagttcgactcattagattcatgaatcaagttcaa 34857423  T
Q  105 cgaattaatta 115  Q
    ||||| |||||    
T  34857424 cgaatcaatta 34857434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 78 - 163
Target Start/End: Original strand, 31021913 - 31021998
Alignment:
Q  78 ctcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcag 163  Q
    |||||||||||||||||||||  ||||||| ||||||| ||| |||||||  |||| || ||| |||| |||||||||||||||||    
T  31021913 ctcatttggttcatgaaccaaactcaacgagttaattatcgagtcgagttccgaactatattcgagttggttcggttcattgtcag 31021998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 39409117 - 39409206
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaa 94  Q
    ||||||||||||| |||  ||| |||||||||| ||||||||||  |||||||||| ||  |||||| ||||||||||| ||||||||||    
T  39409117 aaacgagtcgaaccatatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaa 39409206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 154
Target Start/End: Original strand, 3457803 - 3457956
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaat----attcgactcaatttcgactcatttggttcatgaaccaagt 100  Q
    |||||||||  |||||| ||||||||||| ||| ||||||||||  ||| ||||||    |||  |||||| ||||| |||||||||||| ||| | |||    
T  3457803 aaacgagtcagactatatatagctcaagtccaactcatttatttaacgaacttaatttttatttaactcaagttcgattcatttggttcaagaatcgagt 3457902  T
Q  101 tcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggtt 154  Q
    |||||||| |||||||| |||||| | |  ||| |||||| |||| ||||||||    
T  3457903 tcaacgaactaattaccaaatcgaatctcaaactattttcgagttggttcggtt 3457956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 169
Target Start/End: Original strand, 39414232 - 39414323
Alignment:
Q  78 ctcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagccttaa 169  Q
    |||||| |||||||| |||||||||||||| ||||||  |||||  ||||| |||| ||| || |||| |||||||||||| ||||||||||    
T  39414232 ctcattaggttcatggaccaagttcaacgagttaattgtcgaattaagtttcgaactattgtcgagttggttcggttcattttcagccttaa 39414323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 15933137 - 15933300
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaata---ttcgactcaatttcgactcatttggttcatgaaccaagtt 101  Q
    ||||||||||||| ||  |||||||||||||   ||||||||||  ||| |||||||   ||   ||||  ||| ||||||| |||||||||||||||||    
T  15933137 aaacgagtcgaaccatctatagctcaagttcggctcatttatttaacgaacttaatagtatttagctcatgttcaactcattaggttcatgaaccaagtt 15933236  T
Q  102 caacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    ||||||||||| |  ||| |||| ||| |||| ||  || |||| ||||||||||||| |||||    
T  15933237 caacgaattaactgtcgagtcgaatttcgaactatactcgagttggttcggttcattgccagcc 15933300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 51 - 163
Target Start/End: Original strand, 24202725 - 24202837
Alignment:
Q  51 cgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttc 150  Q
    |||||||||| ||| |||||| ||||| |||||| |||||| ||| ||||  ||| | || ||||||||||| ||||| |||| ||||| ||||| |||     
T  24202725 cgagcttaattttcaactcaagttcgattcatttagttcatcaacaaagtctaacaagttgattaccgaatcaagtttcgaactatttttaagttggttt 24202824  T
Q  151 ggttcattgtcag 163  Q
    |||||| ||||||    
T  24202825 ggttcactgtcag 24202837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 78 - 170
Target Start/End: Original strand, 24536057 - 24536149
Alignment:
Q  78 ctcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagccttaat 170  Q
    |||||||| |||||||||||  |||||| ||||||||| | |||  ||| |||||| ||||||||||| |||| ||||||| |||||| ||||    
T  24536057 ctcatttgattcatgaaccagattcaacaaattaattatcaaattaagtcttgaactattttcaagttggttcagttcattttcagccataat 24536149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 36523728 - 36523849
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgag----cttaatattcgactcaatttcgactcatttggttcatgaaccaagt 100  Q
    |||||| || ||||||||||||||||||||||  ||||||||||  | |     |||||| ||  | |||| ||||||||||||||||||||||||||||    
T  36523728 aaacgaatcaaactatacatagctcaagttcagctcatttatttaacaaattaacttaatttttaaatcaagttcgactcatttggttcatgaaccaagt 36523827  T
Q  101 tcaacgaattaattaccgaatc 122  Q
    |||| ||||  |||| ||||||    
T  36523828 tcaatgaatctattatcgaatc 36523849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 164
Target Start/End: Complemental strand, 17168538 - 17168447
Alignment:
Q  73 ttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagc 164  Q
    |||| |||||||||||  ||||||||||||||| |||||| || |||||| ||| |  ||| |||||| ||||  |||||||||||||||||    
T  17168538 ttcggctcatttggtttgtgaaccaagttcaacaaattaaatatcgaatctagtctcaaactattttcgagttacttcggttcattgtcagc 17168447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 163
Target Start/End: Complemental strand, 19282274 - 19282119
Alignment:
Q  8 cgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacga 107  Q
    |||||||||||||| | || |||||||||  |||| || ||  ||| | |||| |||  ||||| |||  ||||||||||||||||||||||||||||||    
T  19282274 cgagtcgaactatatacagttcaagttcagctcatctacttaacgaacctaattttcagctcaagttcagctcatttggttcatgaaccaagttcaacga 19282175  T
Q  108 attaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcag 163  Q
     ||||||  |||||  ||||  |||| ||| || |||| |||| | ||||||||||    
T  19282174 gttaattgtcgaatgaagttccgaactattatcgagttggttcagctcattgtcag 19282119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 124
Target Start/End: Complemental strand, 20190685 - 20190628
Alignment:
Q  67 ctcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatcga 124  Q
    ||||| |||| ||||||||||||||||||||||||| | |||| ||||| ||||||||    
T  20190685 ctcaagttcggctcatttggttcatgaaccaagttcgatgaatcaattatcgaatcga 20190628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 30661070 - 30660946
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||||||| |||| ||| |||| | |||| || ||  | | |||||| ||| ||| || |||  ||||||| |||||||||| ||||||||    
T  30661070 aaacgagtcgaactatatatagttcatgttcgactcatataattaacaaacttaattttcaacttaaattcagctcatttagttcatgaactaagttcaa 30660971  T
Q  105 cgaattaattaccgaatcgagtttt 129  Q
      ||| ||||| |||||||||||||    
T  30660970 taaatcaattatcgaatcgagtttt 30660946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 165
Target Start/End: Original strand, 27906080 - 27906235
Alignment:
Q  10 agtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaat 109  Q
    ||||||||||||  |||||||||||||  ||||||| ||  ||| |||||| |||  ||||| | |  ||| || |||||||||||||||||||||| ||    
T  27906080 agtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggat 27906179  T
Q  110 taattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    ||  || ||| |||| | | |||| ||  || |||| ||||||||||||| |||||    
T  27906180 tagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcc 27906235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 165
Target Start/End: Complemental strand, 38523023 - 38522864
Alignment:
Q  6 aacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaac 105  Q
    ||||| |||||| ||  |||| |||||||||  ||||||| ||  ||| |||||| |||  ||||| || | |||||||||||||||||||||||||||     
T  38523023 aacgaatcgaaccatctatagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtttggctcatttggttcatgaaccaagttcaat 38522924  T
Q  106 gaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    | |  ||||| ||| || | ||  |||| || ||| |||| ||||||||||||| |||||    
T  38522923 ggaccaattatcgagtcaaattacgaactatattcgagttggttcggttcattgccagcc 38522864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 28246732 - 28246798
Alignment:
Q  28 tcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaa 94  Q
    |||||||||| ||||||||||   ||| ||||| ||| |||||| ||||||||||||||||| ||||    
T  28246732 tcaagttcaactcatttatttaatgagtttaattttcaactcaagttcgactcatttggttcgtgaa 28246798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 165
Target Start/End: Original strand, 28247473 - 28247547
Alignment:
Q  91 tgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    ||||||||||||||||||| ||||| | |||| | | | |||| |||||| | || |||||||||||||||||||    
T  28247473 tgaaccaagttcaacgaatcaattatcaaatcaaatatcgaactattttcgaattggttcggttcattgtcagcc 28247547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 157
Target Start/End: Original strand, 28431099 - 28431184
Alignment:
Q  72 tttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcat 157  Q
    |||| |||||||| |||||||||||||||||||| | | ||||| ||||||| || | |||| |||| | |||| ||| |||||||    
T  28431099 tttcaactcatttagttcatgaaccaagttcaacaattcaattatcgaatcgtgtatcgaactatttacgagttggtttggttcat 28431184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 165
Target Start/End: Original strand, 29328100 - 29328180
Alignment:
Q  85 ggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    |||||||||| ||||||||||| ||||| || ||| |||| | | |||| ||  || |||| |||||||||||||||||||    
T  29328100 ggttcatgaatcaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagtttgttcggttcattgtcagcc 29328180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 97; Significance: 8e-48; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 49405798 - 49405638
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    |||||||||||||||| |||| |||||||||   ||||||||||| |||||||||| ||||| |||| ||||||||||||||||||| ||||||||||||    
T  49405798 aaacgagtcgaactatccataactcaagttcggctcatttatttgacgagcttaattttcgattcaagttcgactcatttggttcataaaccaagttcaa 49405699  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    ||||| |||||||||||||||||| |||| ||||||  ||| |||||||||||||||||||    
T  49405698 cgaatcaattaccgaatcgagtttcgaactattttcgggttggttcggttcattgtcagcc 49405638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 48802639 - 48802478
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttc-a 103  Q
    |||||||||||||||| ||||||||||||||   ||||||||||| |||||||||| |||||||||| |||||||||||||||||||||| ||||||| |    
T  48802639 aaacgagtcgaactattcatagctcaagttcggctcatttatttgacgagcttaattttcgactcaagttcgactcatttggttcatgaatcaagttcaa 48802540  T
Q  104 acgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    |  ||| ||| ||| |||||||||| |||| |||||| |||| |||||||||||||||||||    
T  48802539 aaaaatcaataaccaaatcgagtttcgaactattttcgagttggttcggttcattgtcagcc 48802478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 80474 - 80634
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    |||||||||||| ||||| ||| ||||||||   ||||||||||| |||||||||| ||| |||||| ||||||||||||||||||||||||||||||||    
T  80474 aaacgagtcgaattatacgtagttcaagttcggctcatttatttgacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaa 80573  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    ||||  |||||||||||| | ||| |||| |||||| |||| | ||||||||||| |||||    
T  80574 cgaaacaattaccgaatcaaatttcgaactattttcgagttggatcggttcattgccagcc 80634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 7 - 165
Target Start/End: Complemental strand, 51408110 - 51407952
Alignment:
Q  7 acgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacg 106  Q
    |||||||||||||||| | | |||||||||| |||||| |||| ||| |||||| ||  || ||  ||||||||||||||||||||||||||||| ||||    
T  51408110 acgagtcgaactatacttggttcaagttcaactcatttgtttgacgaacttaattttaaacccaggttcgactcatttggttcatgaaccaagttgaacg 51408011  T
Q  107 aattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    |||||||||||||||||||| | |||| |||||| |||| |||| ||||||||||||||    
T  51408010 aattaattaccgaatcgagtctcgaactattttcgagttggttcagttcattgtcagcc 51407952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 55892148 - 55891988
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    |||||| | ||||||||| | |||||||||||| |||||| |||| ||| |||||| ||  || ||  |||||||| |||||||||||||||||||||||    
T  55892148 aaacgaattgaactatacttggctcaagttcaactcatttgtttgacgaacttaattttaaacccaggttcgactcgtttggttcatgaaccaagttcaa 55892049  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    |||||||||||||||||||||| | |||| |||||  |||| |||| ||||||||||||||    
T  55892048 cgaattaattaccgaatcgagtctcgaactatttttgagttggttcagttcattgtcagcc 55891988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 159
Target Start/End: Complemental strand, 12673191 - 12673037
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||| ||||  | ||||||||| | ||||||||||   ||||||||| ||| |||||| ||||||||||||||||||||||||||||||||    
T  12673191 aaacgagtcgaaccatactcaactcaagttcgactcatttatttaatgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaa 12673092  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattg 159  Q
    ||| | ||||| |||||||| | | |||| |||||| |||| |||||||||||||    
T  12673091 cgagtcaattatcgaatcgaatctcgaactattttcgagttggttcggttcattg 12673037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 159
Target Start/End: Original strand, 40797807 - 40797961
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||| ||||  || |||||||||| ||||||||||  |||||||||| ||| |||||| ||||||||||||||||||||||||||||||||    
T  40797807 aaacgagtcgaaccatactaagttcaagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaa 40797906  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattg 159  Q
     |||  ||||| |||||| ||| | |||| |||||  |||| |||||||||||||    
T  40797907 tgaaccaattatcgaatcaagtatcgaactatttttgagttggttcggttcattg 40797961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 28265833 - 28265676
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||||| || | |||||||||||| |||||| |||| ||| |||||| ||  |||||  |||   || |||||||||||||||||||||||    
T  28265833 aaacgagtcgaactacacttggctcaagttcaactcatttgtttgacgaacttaattttaaactcagattc---tcgtttggttcatgaaccaagttcaa 28265737  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    |||||||||||||||||||||| | |||| |||||| |||| |||| |||||||| |||||    
T  28265736 cgaattaattaccgaatcgagtctcgaactattttcgagttggttcagttcattgccagcc 28265676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 171
Target Start/End: Complemental strand, 46944707 - 46944541
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||| ||||  | ||||||||| | | ||||||||  |||||||||  ||| |||||| ||||||||||||||||||||||||||||||||    
T  46944707 aaacgagtcgaaccatactcaactcaagttcgacttatttatttaacgagcttaaatttcaactcaagttcgactcatttggttcatgaaccaagttcaa 46944608  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagccttaata 171  Q
    |||   ||||| |||||||| | | |||| |||||  |||| ||||||||||||||||||| |||||    
T  46944607 cgagccaattatcgaatcgaatctcgaactatttttgagttggttcggttcattgtcagccctaata 46944541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 8 - 165
Target Start/End: Complemental strand, 11055386 - 11055229
Alignment:
Q  8 cgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacga 107  Q
    |||||||||||||| | |||||||||||   ||||||||||  ||| |||||| |||  ||||| |||  ||||||||||||||||||||||||||| ||    
T  11055386 cgagtcgaactatatacagctcaagttcggctcatttatttaacgaacttaattttccgctcaagttcagctcatttggttcatgaaccaagttcaatga 11055287  T
Q  108 attaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
     ||||||| |||||||||||  |||| ||| || |||| |||||||||||||||||||    
T  11055286 gttaattatcgaatcgagttccgaactattgtcgagttggttcggttcattgtcagcc 11055229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 109
Target Start/End: Original strand, 44378229 - 44378331
Alignment:
Q  7 acgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacg 106  Q
    |||||||||| ||||| |||||||||||||| ||||||||||  |||||||||| ||| || ||| ||| ||||||||||||||||||||||||||||||    
T  44378229 acgagtcgaattatacttagctcaagttcaactcatttatttaacgagcttaattttcaacccaaattcaactcatttggttcatgaaccaagttcaacg 44378328  T
Q  107 aat 109  Q
    |||    
T  44378329 aat 44378331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 159
Target Start/End: Original strand, 51995071 - 51995209
Alignment:
Q  21 acatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaa 120  Q
    |||||| |||||||||| || |||||||  | | |||||| ||   ||||| |||| |||||||||||||||||||||||||||||||||||||| ||||    
T  51995071 acatagttcaagttcaactcgtttatttaacaaacttaattttgagctcaagttcggctcatttggttcatgaaccaagttcaacgaattaattatcgaa 51995170  T
Q  121 tcgagttttgaacaattttcaagttcgttcggttcattg 159  Q
    |||||| | |||| |||||| |||| |||||||||||||    
T  51995171 tcgagtctcgaactattttcgagttggttcggttcattg 51995209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 7 - 159
Target Start/End: Complemental strand, 9222291 - 9222141
Alignment:
Q  7 acgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacg 106  Q
    ||||||||||| ||||  || |||||||||||||||||||||  |||||||||| | | |||||| |||||||||||||||   ||||||||||||||||    
T  9222291 acgagtcgaaccatactaagttcaagttcaattcatttatttaacgagcttaatttacaactcaagttcgactcatttggt--gtgaaccaagttcaacg 9222194  T
Q  107 aattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattg 159  Q
    ||  ||||  |||||||||| | |||| |||||| |||| |||||||||||||    
T  9222193 aaccaattgtcgaatcgagtatcgaactattttcgagttggttcggttcattg 9222141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 43798386 - 43798265
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||||||||||||||||||||||| ||||||||||   || ||| || ||  ||||||  ||||||||||||||||| ||||| |||||||    
T  43798386 aaacgagtcgaactatacatagctcaagttcaactcatttatttaatgatcttcattttttactcaagctcgactcatttggttcaagaaccgagttcaa 43798287  T
Q  105 cgaattaattaccgaatcgagt 126  Q
    ||| ||||||| ||||||||||    
T  43798286 cgagttaattatcgaatcgagt 43798265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 19455321 - 19455161
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    |||| ||||||||| || ||||||||||||||| |||||||  |  | | |||||| ||| |||||| |||  |||||||| ||||||||||||||||||    
T  19455321 aaacaagtcgaactgtatatagctcaagttcaactcatttagataacaaacttaattttcaactcaagttcagctcatttgattcatgaaccaagttcaa 19455222  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    ||||||||||  | |||||||||| |||| |||||| | |  | |||||||||||||||||    
T  19455221 cgaattaattgtcaaatcgagtttcgaactattttcgaataagctcggttcattgtcagcc 19455161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 172
Target Start/End: Original strand, 1803475 - 1803637
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||| |||  ||| |||||||||| ||||||||||  |||||||||| ||  |||||| ||||||||||| |||||||||| |||||| ||    
T  1803475 aaacgagtcgaaccatatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaatcaagtttaa 1803574  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagccttaatat 172  Q
    ||||| ||||| ||||||     | | ||  ||||| |||| ||||||||||||||||||| ||||||    
T  1803575 cgaatcaattatcgaatc-----tcgcactcttttcgagttggttcggttcattgtcagccctaatat 1803637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 127
Target Start/End: Original strand, 22721305 - 22721426
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||||||| ||| ||||||||||| ||||||||||  ||| |||||| || | || || || | ||| |||||||||||||||||||||||    
T  22721305 aaacgagtcgaactatatataactcaagttcaactcatttatttaacgaacttaattttag-cttaagtttgcctcgtttggttcatgaaccaagttcaa 22721403  T
Q  105 cgaattaattaccgaatcgagtt 127  Q
     ||| ||||||||||||||||||    
T  22721404 tgaactaattaccgaatcgagtt 22721426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 21 - 170
Target Start/End: Original strand, 13455694 - 13455843
Alignment:
Q  21 acatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaa 120  Q
    |||||| |||||||||| || |||||||  ||| |||||| ||   ||||| || |||||||||||||||| || |||||||||||||||||||| ||||    
T  13455694 acatagttcaagttcaactcgtttatttaacgaacttaattttgagctcaagttggactcatttggttcataaatcaagttcaacgaattaattatcgaa 13455793  T
Q  121 tcgagttttgaacaattttcaagttcgttcggttcattgtcagccttaat 170  Q
    |||| | |  ||  ||||||||||| |||||||| |||||||||| ||||    
T  13455794 tcgaatctcaaattattttcaagttggttcggtttattgtcagccctaat 13455843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 24008066 - 24007906
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||| |||  |||||||||||||| ||||||||||  ||| |||||| ||  |||||| ||  |||| || ||||||||||||||||||||    
T  24008066 aaacgagtcgaaccatatttagctcaagttcaactcatttatttaacgaacttaattttaaactcaagtttaactcgttaggttcatgaaccaagttcaa 24007967  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    ||||| ||| | | |||||| | | |||| |||||| |||| ||||  |||||||||||||    
T  24007966 cgaatcaatcatcaaatcgaatctcgaactattttcgagttggttcaattcattgtcagcc 24007906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 73 - 164
Target Start/End: Complemental strand, 9874303 - 9874212
Alignment:
Q  73 ttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagc 164  Q
    |||| ||||||||||||||| ||||| ||||||||||||||||| ||||||| | |||||| |||||  |||| ||||||||||||||||||    
T  9874303 ttcggctcatttggttcatgtaccaatttcaacgaattaattactgaatcgaatcttgaactatttttgagttggttcggttcattgtcagc 9874212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 25134551 - 25134646
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagt 100  Q
    ||||||||||||| ||||  || |||||||||| ||||||||||  ||| |||||| ||| |||||| ||||||||||||||||||||||||||||    
T  25134551 aaacgagtcgaaccatactaagttcaagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccaagt 25134646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 76 - 127
Target Start/End: Original strand, 28470867 - 28470918
Alignment:
Q  76 gactcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagtt 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28470867 gactcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagtt 28470918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 52706194 - 52706308
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||||||| ||| ||||||||||| ||||||| ||  ||| |||||| ||   ||||| |||| ||| |||||||||||||||||||| ||    
T  52706194 aaacgagtcgaactatatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagtttaa 52706293  T
Q  105 cgaattaattaccga 119  Q
    |||| ||||||||||    
T  52706294 cgaactaattaccga 52706308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 5 - 162
Target Start/End: Complemental strand, 36156457 - 36156300
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||||| | |||| |||||||||  ||| ||| ||| ||| |||||| |||  ||||| |||| ||||||||||||| |||||||||||||    
T  36156457 aaacgagtcgaactacatatagttcaagttcagctcaattagttgacgaacttaattttcagctcaagttcggctcatttggttcaagaaccaagttcaa 36156358  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtca 162  Q
    ||||| ||||  |||||||| ||  ||||  |  || |||| ||||||||||||||||    
T  36156357 cgaatcaattgtcgaatcgaattacgaactttaatcgagttggttcggttcattgtca 36156300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 165
Target Start/End: Original strand, 7505517 - 7505666
Alignment:
Q  16 actatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaattaatta 115  Q
    |||||| ||| ||||||||||| ||||||| ||  |||  ||||| ||   ||||| |||| ||||||||||||||||| ||||||||||||| ||||||    
T  7505517 actatatataactcaagttcaactcatttagttaacgaatttaatttttagctcaagttcggctcatttggttcatgaatcaagttcaacgaactaatta 7505616  T
Q  116 ccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    |||| || |||| |||||  | ||| ||||   |||||||||||||||||    
T  7505617 ccgagtcaagttctgaactttattcgagttgtatcggttcattgtcagcc 7505666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 133
Target Start/End: Complemental strand, 16742432 - 16742371
Alignment:
Q  72 tttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaac 133  Q
    |||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||    
T  16742432 tttcaactcatttggttcatgaaccaagttcaacgaatcaattgccgaatcgagttctgaac 16742371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 170
Target Start/End: Original strand, 22184484 - 22184645
Alignment:
Q  9 gagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaa 108  Q
    ||||||||||||| | || |||||||||  |||||| |||  ||| |||||| |||  ||||| |||  ||| ||||||||||||||||||||||||||     
T  22184484 gagtcgaactatataaagttcaagttcagctcatttgtttaacgaacttaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacgag 22184583  T
Q  109 ttaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagccttaat 170  Q
    ||||||  ||||||||||    ||| ||| || |||| ||||||||||||| ||||| ||||    
T  22184584 ttaattgtcgaatcgagtcccaaactattgtcgagttggttcggttcattgccagccctaat 22184645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 50710933 - 50710840
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaa 98  Q
    ||||||||||||| ||||  || | |||||||| | ||||||||  |||||||||| ||| |||||||||||||||||||| ||||||||||||    
T  50710933 aaacgagtcgaaccatactaagtttaagttcaacttatttatttaacgagcttaattttcaactcaatttcgactcatttgattcatgaaccaa 50710840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 48339262 - 48339162
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||||| | |||||| |||||||  ||| ||| ||| ||| |||||| |||  ||||| ||||||||||||| ||||||||||||||||||    
T  48339262 aaacgagtcgaactacatatagcttaagttcagctcaattagttgacgaacttaattttcagctcaagttcgactcatttgattcatgaaccaagttcaa 48339163  T
Q  105 c 105  Q
    |    
T  48339162 c 48339162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 170
Target Start/End: Original strand, 56224129 - 56224287
Alignment:
Q  12 tcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaatta 111  Q
    ||||| |||| |||| |||||||||| | ||||| ||  |||  ||||| |||  ||||| |||| ||||||||||| || |||||||||||||||||||    
T  56224129 tcgaattatatatagttcaagttcaacttatttaattaacgaatttaattttcagctcaagttcggctcatttggtttattaaccaagttcaacgaatta 56224228  T
Q  112 attaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagccttaat 170  Q
    |||   || || ||||| |||| || ||  |||| ||||||||||||||||||| ||||    
T  56224229 attgttgagtcaagtttcgaactatgtttgagttggttcggttcattgtcagccctaat 56224287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 122
Target Start/End: Complemental strand, 6866257 - 6866149
Alignment:
Q  14 gaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaattaat 113  Q
    |||||| | ||||||||||||||  ||| ||| ||| ||| |||||| |||  ||||| |||| ||||||||||||||||||||||||  |||||| |||    
T  6866257 gaactacatatagctcaagttcagctcaattagttgacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagtttgacgaatcaat 6866158  T
Q  114 taccgaatc 122  Q
    || ||||||    
T  6866157 tatcgaatc 6866149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 159
Target Start/End: Original strand, 26632947 - 26633067
Alignment:
Q  39 tcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattt 138  Q
    ||||||||||  ||| |||||| |||  ||||| |||  ||||||||||| |||| ||||||||||||| ||||||  |||||||||||  |||| |||     
T  26632947 tcatttatttaacgaacttaattttcagctcaagttcagctcatttggttaatgagccaagttcaacgagttaattgtcgaatcgagttacgaactatta 26633046  T
Q  139 tcaagttcgttcggttcattg 159  Q
    || |||| |||||||||||||    
T  26633047 tcgagttggttcggttcattg 26633067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 165
Target Start/End: Original strand, 9959382 - 9959468
Alignment:
Q  78 ctcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    |||||||| ||||||||| ||||||||||| ||| |||  ||||||||||| |||| ||| || |||| |||||||||||||||||||    
T  9959382 ctcatttgattcatgaac-aagttcaacgagttatttatagaatcgagtttcgaactattgtcgagttggttcggttcattgtcagcc 9959468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 116
Target Start/End: Original strand, 50137375 - 50137481
Alignment:
Q  10 agtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaat 109  Q
    |||||||| ||||||| ||  |||||||||  |||||||  |||| ||||| |||  ||||| |||||||||| |||||||| ||||||  |||||||||    
T  50137375 agtcgaacaatacataacttgagttcaatttgtttatttaacgagtttaattttcacctcaagttcgactcatctggttcataaaccaaaatcaacgaat 50137474  T
Q  110 taattac 116  Q
    |||||||    
T  50137475 taattac 50137481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 165
Target Start/End: Complemental strand, 9906516 - 9906359
Alignment:
Q  8 cgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacga 107  Q
    ||||||||| |||| ||| ||||||||||| | |||||| |   ||| ||||| ||| |||||| ||||| ||||||   ||||||| ||||||||||||    
T  9906516 cgagtcgaattatatataactcaagttcaacttatttatataatgagtttaattttcaactcaagttcgaatcatttaagtcatgaatcaagttcaacga 9906417  T
Q  108 attaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    | ||||||| ||||| | | |  ||| ||||| ||||| |||  ||||||||||||||    
T  9906416 actaattactgaatcaaatctcaaactatttttaagttggtttagttcattgtcagcc 9906359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 25102760 - 25102667
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaa 98  Q
    |||||||| |||| |||| ||| | || ||||| ||||||||||  | || ||||| ||| ||||||||||| |||||||||||||||||||||    
T  25102760 aaacgagttgaaccatacttagtttaaattcaactcatttatttaacaagtttaatgttcaactcaatttcggctcatttggttcatgaaccaa 25102667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 67 - 159
Target Start/End: Complemental strand, 4274657 - 4274565
Alignment:
Q  67 ctcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattg 159  Q
    ||||| |||| |||||||| |||||||| || |||||||||  |||||  |||||| ||||| |||| |||||| |||| |||||||||||||    
T  4274657 ctcaagttcggctcatttgtttcatgaatcaggttcaacgagataattgtcgaatcaagtttcgaactattttcgagttggttcggttcattg 4274565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 162
Target Start/End: Original strand, 21441559 - 21441715
Alignment:
Q  6 aacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaac 105  Q
    ||||||||||||||||  |||||||||||||  ||||||| ||  ||| |||||| |||  ||||| | |  ||| || |||||||||||||||||||||    
T  21441559 aacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaac 21441658  T
Q  106 gaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtca 162  Q
    | ||||  || ||| |||| | | |||| ||  || |||| ||||||||||||||||    
T  21441659 ggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtca 21441715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 170
Target Start/End: Original strand, 53369850 - 53370014
Alignment:
Q  6 aacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaac 105  Q
    ||||||||||||||||  |||||||||||||  ||||||| ||  ||| |||||| |||  ||||| | |  ||| || |||||||||||||||||||||    
T  53369850 aacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaac 53369949  T
Q  106 gaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagccttaat 170  Q
    | ||||| || ||| | || | | |||| ||  || |||| ||||||||||||| ||||| ||||    
T  53369950 ggattaaatatcgagttgaatgtcgaactataatcgagttggttcggttcattgccagccctaat 53370014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 165
Target Start/End: Original strand, 27891444 - 27891523
Alignment:
Q  86 gttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    |||||||||||||||||||||| ||||||  |||||||||||  |||| ||| || ||||  |||| |||||||||||||    
T  27891444 gttcatgaaccaagttcaacgagttaattgtcgaatcgagttccgaactattgtcgagttgattcgattcattgtcagcc 27891523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 112
Target Start/End: Original strand, 19852956 - 19853062
Alignment:
Q  6 aacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaac 105  Q
    ||||||||||||||||  |||||||||||||  ||||||| ||  ||| |||||| |||  ||||| | |  ||| || |||||||||||||||||||||    
T  19852956 aacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccatctcgttaggttcatgaaccaagttcaac 19853055  T
Q  106 gaattaa 112  Q
    | |||||    
T  19853056 ggattaa 19853062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 52813585 - 52813687
Alignment:
Q  12 tcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaatta 111  Q
    |||||||||| | ||||||||||||  |||||| |||  ||| |||||| |||  || || |||  ||| |||||||||||||||||||||||||| |||    
T  52813585 tcgaactatataaagctcaagttcagctcatttgtttaacgaacttaattttcagcttaagttcagctcgtttggttcatgaaccaagttcaacgagtta 52813684  T
Q  112 att 114  Q
    |||    
T  52813685 att 52813687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 13761849 - 13761898
Alignment:
Q  78 ctcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagtt 127  Q
    ||||||||||||||||||||||| |||||| ||||||  |||||||||||    
T  13761849 ctcatttggttcatgaaccaagtccaacgagttaattgtcgaatcgagtt 13761898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 124
Target Start/End: Complemental strand, 50147007 - 50146962
Alignment:
Q  79 tcatttggttcatgaaccaagttcaacgaattaattaccgaatcga 124  Q
    ||||||||||||||||||||||||||||||| ||||  ||||||||    
T  50147007 tcatttggttcatgaaccaagttcaacgaatcaattgtcgaatcga 50146962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 111
Target Start/End: Original strand, 50605986 - 50606091
Alignment:
Q  6 aacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaac 105  Q
    ||||||||||||||||  |||||||||||||  ||||||| ||  ||| |||||| |||  ||||| | |  ||| || |||||||||||||||||||||    
T  50605986 aacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaac 50606085  T
Q  106 gaatta 111  Q
    | ||||    
T  50606086 ggatta 50606091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 24550054 - 24550174
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcat-gaaccaagttca 103  Q
    ||||||||||| ||||||||| ||||||||||| ||||||| ||  | | |||||| ||   ||||| ||| ||||| |||||| ||  || ||||||||    
T  24550054 aaacgagtcgagctatacataactcaagttcaactcatttagttaacaaacttaatttttagctcaagttcaactcagttggtttataaaatcaagttca 24550153  T
Q  104 acgaattaattaccgaatcga 124  Q
    |||||| ||||||||| ||||    
T  24550154 acgaatcaattaccgagtcga 24550174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 165
Target Start/End: Complemental strand, 36644075 - 36643988
Alignment:
Q  77 actcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    ||||||||||||||||||| |||||||| || ||||||| | ||| |||| | |||| |||||  |||| |||||||| ||||||||||    
T  36644075 actcatttggttcatgaacaaagttcaatgagttaattatcaaat-gagtctcgaactattttggagttggttcggttgattgtcagcc 36643988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 114
Target Start/End: Original strand, 38791742 - 38791778
Alignment:
Q  78 ctcatttggttcatgaaccaagttcaacgaattaatt 114  Q
    |||||||||||||||||||||||||||||| ||||||    
T  38791742 ctcatttggttcatgaaccaagttcaacgagttaatt 38791778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 162
Target Start/End: Complemental strand, 52733838 - 52733707
Alignment:
Q  30 aagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagtttt 129  Q
    |||||||| | ||||||||  ||| |||||| |||  ||||||| | ||||||||||||||||||  || |||||||| ||||||| |||||| | |||     
T  52733838 aagttcaacttatttatttaacgaacttaattttcagctcaatt-caactcatttggttcatgaattaaattcaacgagttaattatcgaatcaaatttc 52733740  T
Q  130 gaacaattttcaagttcgttcggttcattgtca 162  Q
    |||  ||| | ||||| |||| |||||||||||    
T  52733739 gaattattattaagttggttcagttcattgtca 52733707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 165
Target Start/End: Original strand, 43387311 - 43387394
Alignment:
Q  82 tttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    ||||||||||||||||| |||||||| ||||||  |||||| |||  | ||| ||| || |||| ||||||||||||| |||||    
T  43387311 tttggttcatgaaccaaattcaacgagttaattgtcgaatcaagtcctaaactattgtcgagttggttcggttcattgccagcc 43387394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 127
Target Start/End: Complemental strand, 43812145 - 43812098
Alignment:
Q  80 catttggttcatgaaccaagttcaacgaattaattaccgaatcgagtt 127  Q
    ||||||||||||||||||||||| |||||| ||||  |||||||||||    
T  43812145 catttggttcatgaaccaagttcgacgaatcaattgtcgaatcgagtt 43812098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 13008103 - 13008063
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcattta 45  Q
    ||||||||||||||| ||||||||||| ||||| |||||||    
T  13008103 aaacgagtcgaactacacatagctcaatttcaactcattta 13008063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 165
Target Start/End: Complemental strand, 15697170 - 15697086
Alignment:
Q  81 atttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    |||||||||||||| |||||||||||||| ||||  ||| |||||| | ||||  | ||| ||||   |||||||||||||||||    
T  15697170 atttggttcatgaatcaagttcaacgaatcaattgtcgagtcgagtctcgaactttattcgagttgtctcggttcattgtcagcc 15697086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 48151267 - 48151143
Alignment:
Q  27 ctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagt 126  Q
    ||||||||| | | ||||||||  ||| |||||| |||  ||||| |||  |||||||||||  ||||||||||||||| |  |||||  ||||||||||    
T  48151267 ctcaagttcgacttatttatttaacgaacttaattttcagctcaagttcagctcatttggtttgtgaaccaagttcaacaagataattgtcgaatcgagt 48151168  T
Q  127 tttgaacaattttcaagttcgttcg 151  Q
    || |||| ||| || |||| |||||    
T  48151167 ttcgaactattgtcgagttggttcg 48151143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 3e-44; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 5 - 163
Target Start/End: Original strand, 31816545 - 31816703
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    |||||||||||| ||| |||| |||||||||   ||||||||||| |||||||||| ||||||| || ||| ||||||||||||||||||||||||||||    
T  31816545 aaacgagtcgaattatccataactcaagttcggctcatttatttgacgagcttaattttcgactgaagttcaactcatttggttcatgaaccaagttcaa 31816644  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcag 163  Q
    ||||| ||||||||||| |||||| |||| |||||| |||| |||||||||||||||||    
T  31816645 cgaatcaattaccgaattgagtttcgaactattttcgagttggttcggttcattgtcag 31816703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 29677682 - 29677522
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    |||||||||||||||||| ||| |||||||||  ||||||||||   ||||||||| ||| |||||| ||||||||||||||||| ||||||||||||||    
T  29677682 aaacgagtcgaactatacttagttcaagttcagctcatttatttaaagagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaa 29677583  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    ||||  ||||| | |||||||| | |||| |||||| |||| ||||||||||||| |||||    
T  29677582 cgaaccaattatcaaatcgagtatcgaactattttcgagttggttcggttcattgccagcc 29677522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 159
Target Start/End: Original strand, 28006327 - 28006481
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||| ||||  | ||||||||| | ||||||||||  |||||||||| ||| |||||| ||||||||||||||||||||||||||||||||    
T  28006327 aaacgagtcgaaccatactcaactcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaa 28006426  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattg 159  Q
    ||| | ||||| |||||||| | | |||| |||||| |||| |||||||||||||    
T  28006427 cgagtcaattatcgaatcgaatctcgaactattttcgagttggttcggttcattg 28006481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 39802930 - 39802770
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    |||||| |||| |||||||||||||||||||   ||||||||||  ||| |||||| ||| |||||| ||||||||||||||||||||||||| ||||||    
T  39802930 aaacgaatcgagctatacatagctcaagttcggctcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccatgttcaa 39802831  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    |||||||| | ||||| ||||| | |||| |||||| |||| ||||| ||||||| |||||    
T  39802830 cgaattaactgccgaaccgagtctcgaactattttcgagttggttcgattcattgccagcc 39802770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 45581171 - 45581011
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||| ||| |||||| | |||||  ||||||| ||   || |||||| |||  ||||| ||| ||||||||||||||||||||||||||||    
T  45581171 aaacgagtcgaaccatatatagctaatgttcatctcatttagttaatgaacttaattttccgctcaagttcaactcatttggttcatgaaccaagttcaa 45581072  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    |||  |||||| |||||||||||| |||| ||||||||||| |||||||||||||||||||    
T  45581071 cgagataattatcgaatcgagtttcgaactattttcaagttggttcggttcattgtcagcc 45581011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 155
Target Start/End: Complemental strand, 48575243 - 48575093
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||| |||||||||||| || ||||||||||| ||||||||||| ||| |||||| ||  | |||| ||||| || |||||||||||||||||||||||    
T  48575243 aaacgggtcgaactatacttaactcaagttcaactcatttatttgacgaacttaattttaaattcaagttcgattcgtttggttcatgaaccaagttcaa 48575144  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttc 155  Q
    ||||||||||||||||| |||| |   || |||||| |||| |||||||||    
T  48575143 cgaattaattaccgaattgagtctcatactattttcgagttagttcggttc 48575093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 162
Target Start/End: Original strand, 7995948 - 7996105
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||| |||| ||  ||||||| |  ||||||||||  |||||||||| ||  ||| || ||||||||||| |||| |||||||||||||||    
T  7995948 aaacgagtcgaaccatacttaattcaagttgagctcatttatttaacgagcttaattttaaacttaagttcgactcattaggtttatgaaccaagttcaa 7996047  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtca 162  Q
    ||||| ||||| |||||||| | | |||| ||||||||||| ||||||||||||||||    
T  7996048 cgaatcaattatcgaatcgaatctcgaactattttcaagttggttcggttcattgtca 7996105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 8 - 165
Target Start/End: Original strand, 15306473 - 15306630
Alignment:
Q  8 cgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacga 107  Q
    |||||||||||||| | |||||||||||   ||||||||||   || |||||| |||  ||||| |||  ||||||||||||||||||||||||||| ||    
T  15306473 cgagtcgaactatatacagctcaagttcggctcatttatttaatgaacttaattttccgctcaagttcagctcatttggttcatgaaccaagttcaatga 15306572  T
Q  108 attaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    |||||||| |||||||||||  |||| ||| ||||||| ||||||||||||| |||||    
T  15306573 attaattatcgaatcgagttccgaactattgtcaagttggttcggttcattgccagcc 15306630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 15257334 - 15257174
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||  ||||  || |||| ||||| ||||||||||  |||||||||| ||| |||||| |||||||||||||||||||||||||||| |||    
T  15257334 aaacgagtcgaatcatactaagttcaaattcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaa 15257235  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
     |||  ||||| |||||||||| |  ||| |||||  |||| |||||||||||||||||||    
T  15257234 tgaaccaattatcgaatcgagtatcaaactatttttgagttggttcggttcattgtcagcc 15257174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 162
Target Start/End: Original strand, 47983232 - 47983389
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||| |||| || || |||||||| ||||||||||  |||| |||   ||  |||||| ||||||||||||||||| ||||||||||||||    
T  47983232 aaacgagtcgaaccatacttaacttaagttcaactcatttatttaacgagtttagattttaactcaagttcgactcatttggttcgtgaaccaagttcaa 47983331  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtca 162  Q
    | ||| ||||| |||||||| | | |||| |||||| |||| ||||||||||||||||    
T  47983332 caaatcaattatcgaatcgaatctcgaactattttcgagttggttcggttcattgtca 47983389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 45653594 - 45653435
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||||||| |||| ||| ||||| ||||||||  |  ||| |||||  ||   ||||| |||| |||||||||||||||||||||||||||    
T  45653594 aaacgagtcgaactatatatagttcatgttcagttcatttagctaacgaacttaacttttagctcaagttcggctcatttggttcatgaaccaagttcaa 45653495  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    |||| |||||  ||||||||||||||||| |||||| |||| | |||||||||||| ||||    
T  45653494 cgaaataattgtcgaatcgagttttgaactattttcgagtt-ggtcggttcattgttagcc 45653435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 165
Target Start/End: Original strand, 50447334 - 50447478
Alignment:
Q  21 acatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaa 120  Q
    |||||| |||||||||| ||||||||||  ||| |||||| ||    |||| |||| |||||||||||||| ||||||||| ||||||||||||| ||||    
T  50447334 acatagttcaagttcaactcatttatttaacgaacttaattttaagttcaagttcggctcatttggttcataaaccaagtttaacgaattaattatcgaa 50447433  T
Q  121 tcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    |||||| | |||| |||||| |||| ||| |||||||||||||||    
T  50447434 tcgagtctcgaactattttcgagttggtttggttcattgtcagcc 50447478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 165
Target Start/End: Original strand, 24575908 - 24576046
Alignment:
Q  27 ctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagt 126  Q
    ||||||||| | ||||||||||  | |||||||| ||| |||||| ||||  ||||||||||||||||||||||||||||| | ||||| |||||| | |    
T  24575908 ctcaagttcgactcatttatttaacaagcttaattttcaactcaagttcgtttcatttggttcatgaaccaagttcaacgagtcaattatcgaatcaaat 24576007  T
Q  127 tttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
     | |||| |||||| |||| |||||||||||||||||||    
T  24576008 ctcgaactattttcgagttggttcggttcattgtcagcc 24576046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 159
Target Start/End: Complemental strand, 40159793 - 40159639
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||| ||||  || |||||||||| ||||||||||  ||| |||||| ||| |||||| ||||||||||||| |||||||||||||| |||    
T  40159793 aaacgagtcgaaccatactaagttcaagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttgattcatgaaccaagtccaa 40159694  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattg 159  Q
     |||  ||||| |||||||| | |  ||| |||||| |||| |||||||||||||    
T  40159693 tgaaccaattatcgaatcgaatatcaaactattttcgagttggttcggttcattg 40159639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 170
Target Start/End: Complemental strand, 38061341 - 38061176
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||| |||  ||| |||||||||| ||||||||||  |||||||||| ||  ||| || ||||||||||| ||||||| || |||||||||    
T  38061341 aaacgagtcgaaccatatttagttcaagttcaactcatttatttaacgagcttaattttaaacttaagttcgactcattaggttcataaatcaagttcaa 38061242  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagccttaat 170  Q
    ||||| ||||| | |||||| | | | || |||||| |||| ||||||||||||| ||||| ||||    
T  38061241 cgaatcaattatcaaatcgaatctcgcactattttcgagttggttcggttcattgccagccctaat 38061176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 5204632 - 5204479
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||| ||||  |  |||||||| | ||||||||||  ||| |||||| ||| |||||| |||||||||||||||||| |||||||||||||    
T  5204632 aaacgagtcgaaccatactcaattcaagttcgactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcacgaaccaagttcaa 5204533  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcatt 158  Q
    ||| | ||||| |||||||| | |  ||| |||||| |||| ||||| ||||||    
T  5204532 cgagtcaattatcgaatcgaatctcaaactattttcgagttggttcgattcatt 5204479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 165
Target Start/End: Complemental strand, 27076662 - 27076518
Alignment:
Q  21 acatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaa 120  Q
    |||||| |||||||||| || |||||||  ||| |||||  ||   ||||| |||| ||||||| ||||||| |||||||||||||||||||||| ||||    
T  27076662 acatagttcaagttcaactcgtttatttaacgaacttaactttgagctcaagttcggctcatttagttcatggaccaagttcaacgaattaattatcgaa 27076563  T
Q  121 tcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    || ||| || ||| ||||||||||| ||||  |||||||||||||    
T  27076562 tcaagtcttaaactattttcaagttggttcaattcattgtcagcc 27076518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 35810695 - 35810855
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||||| | |||| ||||||||   ||| ||||||| ||| |||||| |||  ||||| |||| |||||||||||||||||||||||||||    
T  35810695 aaacgagtcgaactacatatagttcaagttcggctcaattatttgacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcaa 35810794  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    ||||| ||||  |||||||| ||  ||||  |  || |||| ||||||||||||| |||||    
T  35810795 cgaatcaattgtcgaatcgaattacgaactttaatcgagttggttcggttcattgccagcc 35810855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 79 - 165
Target Start/End: Original strand, 7841674 - 7841759
Alignment:
Q  79 tcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| | |||  |||||| |||| ||||||||||||| |||||    
T  7841674 tcatttggttcatgaaccaagttcaacgaattaattatcgaatcgagtctcgaa-tattttcgagttggttcggttcattgacagcc 7841759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 159
Target Start/End: Original strand, 7956301 - 7956455
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||  ||||  || |||||||||| ||||||||||  | |||||||| ||| | |||| ||||||| |||| ||||||||||||||| |||    
T  7956301 aaacgagtcgaatcatactaagttcaagttcaactcatttatttaacaagcttaattttcaattcaagttcgactaattttgttcatgaaccaagtccaa 7956400  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattg 159  Q
     |||  ||||| ||||| |||| | |||| |||||| |||| |||||||||||||    
T  7956401 tgaaccaattatcgaattgagtatcgaactattttcgagttggttcggttcattg 7956455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 67 - 165
Target Start/End: Complemental strand, 12224676 - 12224578
Alignment:
Q  67 ctcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    ||||| |||| |||||||||||||||||||||||||||||| ||||||  |||||||| ||  |||| ||| || |||| |||||||||||||||||||    
T  12224676 ctcaagttcggctcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgaattccgaactattgtcgagttggttcggttcattgtcagcc 12224578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 127
Target Start/End: Original strand, 19508505 - 19508627
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    |||| |||||||||||| ||| |||||| |||| ||||||| ||  ||| |||||| ||   ||||| |||| ||| |||||||||||||||||||||||    
T  19508505 aaacaagtcgaactatatataactcaaggtcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaa 19508604  T
Q  105 cgaattaattaccgaatcgagtt 127  Q
    |||| |||||||||| |||||||    
T  19508605 cgaactaattaccgagtcgagtt 19508627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 8 - 161
Target Start/End: Original strand, 31869574 - 31869727
Alignment:
Q  8 cgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacga 107  Q
    ||||||||| |||| | |||||||||||   ||||||||||  ||| |||||| |||  || || |||| ||||||||||||||||||||||||||||||    
T  31869574 cgagtcgaattatatacagctcaagttcggctcatttatttaacgaacttaattttcagcttaagttcggctcatttggttcatgaaccaagttcaacga 31869673  T
Q  108 attaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtc 161  Q
     ||||||  |||||| ||||  |||| ||| || | || |||||||||||||||    
T  31869674 tttaattgtcgaatcaagttccgaactattgtcgaattagttcggttcattgtc 31869727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 43087629 - 43087469
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    |||||| |||||||||| ||| ||||||||||| ||||||| ||  ||| |||||| ||    |||| |||| ||| |||||||||||||||||||||||    
T  43087629 aaacgaatcgaactatatataactcaagttcaactcatttaattaacgaacttaatctttagttcaagttcggctcgtttggttcatgaaccaagttcaa 43087530  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    | || |||||||||| |||||||  ||||  | ||||||||   || ||||||||||||||    
T  43087529 caaactaattaccgagtcgagttccgaactttattcaagttgtatcagttcattgtcagcc 43087469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 42937051 - 42937160
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    |||||||| |||||||||||||||||||||||  ||| ||| ||| ||| |||||| ||   ||||| |||| |||||||| |||||||||||||||| |    
T  42937051 aaacgagttgaactatacatagctcaagttcagctcaattagttgacgaacttaattttaagctcaagttcggctcatttgattcatgaaccaagttcga 42937150  T
Q  105 cgaattaatt 114  Q
    ||||| ||||    
T  42937151 cgaatcaatt 42937160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 6 - 170
Target Start/End: Original strand, 36419079 - 36419243
Alignment:
Q  6 aacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaac 105  Q
    ||||||||||||||||  |||||||||||||  ||||||| ||  ||| |||||| |||| ||||| | |  |||||| |||||||||||||||||| ||    
T  36419079 aacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcggctcaagtccagctcattaggttcatgaaccaagttcgac 36419178  T
Q  106 gaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagccttaat 170  Q
    | ||||| || ||| |||| | | |||| ||  || |||| ||||||||||||| ||||| ||||    
T  36419179 ggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctaat 36419243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 66 - 165
Target Start/End: Original strand, 6413277 - 6413376
Alignment:
Q  66 actcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    |||||| ||||| ||||||||||||||||||| ||||||||||| ||||| | |||||| | | |||| |||||| |||| ||||| ||||||| |||||    
T  6413277 actcaagttcgattcatttggttcatgaaccaggttcaacgaatcaattatcaaatcgaatctcgaactattttcgagttggttcgattcattgccagcc 6413376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 159
Target Start/End: Complemental strand, 23915757 - 23915606
Alignment:
Q  8 cgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacga 107  Q
    |||||||||||||| | | ||||||||||| ||||||||||   || |||||| |||  || || |||  ||||||||||||||||||||||||||||||    
T  23915757 cgagtcgaactatatacaactcaagttcaactcatttatttaatgaacttaattttcagctaaagttcagctcatttggttcatgaaccaagttcaacga 23915658  T
Q  108 attaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattg 159  Q
      |||||   ||||||||||| ||||  || || |||| ||||| |||||||    
T  23915657 gataattgttgaatcgagtttcgaacttttgtcgagttggttcgattcattg 23915606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 42916277 - 42916158
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||| ||||| || | |||||||||  ||| ||| ||  ||| |||||| |||  ||||| |||| ||||||||||||||||||||||||| |    
T  42916277 aaacgagtcgacctatatatggttcaagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcga 42916178  T
Q  105 cgaattaattaccgaatcga 124  Q
    ||||| ||||| ||||||||    
T  42916177 cgaatcaattatcgaatcga 42916158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 46265107 - 46264988
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||| ||||| |||| |||||||||  ||| ||| ||  ||| |||||| |||  ||||| |||| ||||||| ||||||||||||||||| |    
T  46265107 aaacgagtcgacctatatatagttcaagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcatttagttcatgaaccaagttcga 46265008  T
Q  105 cgaattaattaccgaatcga 124  Q
    ||||| ||||| ||||||||    
T  46265007 cgaatcaattatcgaatcga 46264988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 165
Target Start/End: Complemental strand, 47603024 - 47602865
Alignment:
Q  6 aacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaac 105  Q
    ||||||||||||||||  |||||||||||||  ||||||| ||  ||| |||||| |||  ||||| | |  ||| || |||||||||||||||||||||    
T  47603024 aacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaac 47602925  T
Q  106 gaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    | ||||| || ||| |||| | | |||| ||  || |||| |||||||||||||||||||    
T  47602924 ggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcagcc 47602865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 159
Target Start/End: Original strand, 20349123 - 20349277
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    |||||||||||| |||| |||| |||| ||||  ||||||| ||  ||| |||||| |||  || || |||| ||||||||||  ||||| |||||||||    
T  20349123 aaacgagtcgaattatatatagttcaaattcagctcatttaattaacgaacttaattttcatctgaagttcggctcatttggtatatgaatcaagttcaa 20349222  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattg 159  Q
    ||||||||||| ||| || | |||| ||| || ||| |||| |||||||||||||    
T  20349223 cgaattaattatcgagtcaaattttaaactatgttcgagttggttcggttcattg 20349277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 7596370 - 7596487
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||||| | |||| |||||||||  ||| ||| ||  ||| |||||| |||  ||||| |||| |||||||||||||| |||||||||| |    
T  7596370 aaacgagtcgaactacatatagttcaagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcatttggttcataaaccaagttcga 7596469  T
Q  105 cgaattaattaccgaatc 122  Q
    ||||| ||||| ||||||    
T  7596470 cgaatcaattatcgaatc 7596487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 40002871 - 40002960
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaa 94  Q
    ||||||||||||||| | ||||||||||||||| ||| ||| ||| ||| |||||| ||| |||||| |||| |||||||| ||||||||    
T  40002871 aaacgagtcgaactacatatagctcaagttcaactcaattagttgacgaacttaattttcaactcaagttcggctcatttgattcatgaa 40002960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 170
Target Start/End: Original strand, 14101913 - 14102005
Alignment:
Q  78 ctcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagccttaat 170  Q
    |||||||||||||||||| |||||||| ||  |||||  |||||||||||| |||| ||| ||||||| |||||| |||||||| ||| ||||    
T  14101913 ctcatttggttcatgaactaagttcaatgagataattgtcgaatcgagtttggaactattatcaagttggttcggatcattgtcggccctaat 14102005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 159
Target Start/End: Complemental strand, 21680757 - 21680665
Alignment:
Q  67 ctcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattg 159  Q
    ||||| |||| |||||||  ||||| |||||||||||||||  |||||| |||||||||||| |||| |||||| || | |||||||||||||    
T  21680757 ctcaagttcggctcatttcattcataaaccaagttcaacgagataattatcgaatcgagtttcgaactattttcgagctggttcggttcattg 21680665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 25125048 - 25124888
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    |||||||  |||||| | ||||||||||||||  ||| ||| ||  |||  ||||| |||  ||||| |||| |||||||||||||||||||||||||||    
T  25125048 aaacgagctgaactacatatagctcaagttcagctcaattagttcacgaaattaattttcagctcaagttcggctcatttggttcatgaaccaagttcaa 25124949  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    ||||| ||||| | |||||| ||  ||||  |  || |||| ||||||||||||| |||||    
T  25124948 cgaatcaattatcaaatcgaattacgaactttaatcgagttggttcggttcattgccagcc 25124888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 133
Target Start/End: Complemental strand, 29113687 - 29113560
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    |||||||| |||||||||||||||||||||||  || |||||| | | | |||||| |||   |||| |||  |  ||||||||||||||||||||||||    
T  29113687 aaacgagttgaactatacatagctcaagttcacctcttttattgg-caaacttaattttcagttcaaattcagcctatttggttcatgaaccaagttcaa 29113589  T
Q  105 cgaattaattaccgaatcgagttttgaac 133  Q
    ||||| |||| || ||| |||||||||||    
T  29113588 cgaatcaattgccaaattgagttttgaac 29113560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 165
Target Start/End: Complemental strand, 7016165 - 7016078
Alignment:
Q  78 ctcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    |||||||||||||||||||||||||||| ||| ||||  |||||||||| | |||   | ||| |||| |||||||||||||||||||    
T  7016165 ctcatttggttcatgaaccaagttcaacaaatcaattgtcgaatcgagtctcgaattttgttcgagttggttcggttcattgtcagcc 7016078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 165
Target Start/End: Complemental strand, 24469979 - 24469820
Alignment:
Q  6 aacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaac 105  Q
    ||||||||||||||||  |||||||||||||  ||||||| ||  ||| |||||| |||  ||||| | |  ||| || |||||||||||||||||||||    
T  24469979 aacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaac 24469880  T
Q  106 gaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    | ||||| || ||| |||| | | |||| ||  || |||| ||||||||||||| |||||    
T  24469879 ggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcc 24469820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 165
Target Start/End: Original strand, 32179836 - 32179995
Alignment:
Q  6 aacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaac 105  Q
    ||||||||||||||||  |||||||||||||  ||||||| ||  ||| |||||| |||  ||||| | |  |||||| |||| ||||||||||||||||    
T  32179836 aacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcattaggtttatgaaccaagttcaac 32179935  T
Q  106 gaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    | ||||| || ||| |||| | | |||| ||  || |||| ||||||||||||| |||||    
T  32179936 ggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcc 32179995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 165
Target Start/End: Original strand, 44596567 - 44596654
Alignment:
Q  78 ctcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    ||||||||||||||||||||| |||||||| ||||||  |||||||||||   ||| ||| || |||| ||||||||||||| |||||    
T  44596567 ctcatttggttcatgaaccaaattcaacgagttaattgtcgaatcgagttccaaactattgtcgagttggttcggttcattgccagcc 44596654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 13645339 - 13645221
Alignment:
Q  9 gagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaa 108  Q
    ||||||||||||| ||| ||||| ||||| ||||||| ||  ||| |||||| ||   ||||| |||| ||| |||| ||||||||||||||| || |||    
T  13645339 gagtcgaactatatataactcaaattcaactcatttacttaacgaacttaatctttagctcaagttcggctcgtttgattcatgaaccaagttaaatgaa 13645240  T
Q  109 ttaattaccgaatcgagtt 127  Q
     |||||||||| |||||||    
T  13645239 ctaattaccgagtcgagtt 13645221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 115
Target Start/End: Original strand, 15662930 - 15663036
Alignment:
Q  9 gagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaa 108  Q
    ||||||||||| | |||||| ||||||  |||| ||| ||| ||| |||||| |||  ||||| |||| |||||||||| |||||||||||||| |||||    
T  15662930 gagtcgaactacatatagcttaagttcggttcaattagttgacgaacttaattttcagctcaagttcggctcatttggtacatgaaccaagttcgacgaa 15663029  T
Q  109 ttaatta 115  Q
    | |||||    
T  15663030 tcaatta 15663036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 164
Target Start/End: Original strand, 3577722 - 3577807
Alignment:
Q  79 tcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagc 164  Q
    ||||||| ||||||||||||||||||||| |||| |  |||||||||||   ||| ||| || |||| ||||||||||||||||||    
T  3577722 tcatttgattcatgaaccaagttcaacgagttaactgtcgaatcgagttccaaactattgtcgagttagttcggttcattgtcagc 3577807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 15014342 - 15014411
Alignment:
Q  55 cttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatcga 124  Q
    |||||| ||| |||||| |||| ||||||||||||||||| ||||||| |||||| ||||| ||||||||    
T  15014342 cttaattttcaactcaagttcggctcatttggttcatgaatcaagttcgacgaatcaattatcgaatcga 15014411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 23916787 - 23916947
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||||| | || |||||||||||  ||| ||| ||| ||| |||||| |||  ||||| || | ||||||||||| ||||||||||||  |    
T  23916787 aaacgagtcgaactacatattgctcaagttcagctcaattagttgacgaacttaattttcagctcaagttaggctcatttggttaatgaaccaagtttga 23916886  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
     |||| ||||| |||||||| ||  ||||  |  || |||| ||| |||||||||||||||    
T  23916887 tgaatcaattatcgaatcgaattacgaactttaatcgagttggtttggttcattgtcagcc 23916947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 66 - 164
Target Start/End: Original strand, 13912395 - 13912493
Alignment:
Q  66 actcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagc 164  Q
    |||||| ||||| || |||  ||||||| ||||||| ||||||| ||||||  ||||||||||| ||| |||||| ||||| ||| ||||||| |||||    
T  13912395 actcaagttcgattcgttttattcatgatccaagtttaacgaatcaattactaaatcgagttttaaactattttcgagttcattcagttcattctcagc 13912493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 165
Target Start/End: Original strand, 36119122 - 36119208
Alignment:
Q  79 tcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    ||||||||||||| |||||||||| ||||   ||||  |||||||| ||| |||| |||||  |||| |||||||||||||||||||    
T  36119122 tcatttggttcataaaccaagttcgacgagaaaattgtcgaatcgaatttcgaactattttttagttggttcggttcattgtcagcc 36119208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 111
Target Start/End: Complemental strand, 37441348 - 37441243
Alignment:
Q  6 aacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaac 105  Q
    ||||||||||||||||  |||||||||||||  ||||||| ||  ||| |||||| |||  ||||| | |  ||| || |||||||||||||||||||||    
T  37441348 aacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaac 37441249  T
Q  106 gaatta 111  Q
    | ||||    
T  37441248 ggatta 37441243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 165
Target Start/End: Complemental strand, 14578680 - 14578588
Alignment:
Q  73 ttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    |||| |||||||||||||||||||||||||||| ||| ||||  | |||||| ||  ||||  |  || |||| |||||||||||||||||||    
T  14578680 ttcggctcatttggttcatgaaccaagttcaacaaatcaattgtctaatcgaattacgaactctaatcgagttggttcggttcattgtcagcc 14578588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 30251475 - 30251559
Alignment:
Q  79 tcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaat-tttcaagttcgttcggttcattgtca 162  Q
    |||||| |||||||||||||  ||||||| ||||||| |||||| |||||||||| || |||| | || ||| ||||||||||||    
T  30251475 tcatttagttcatgaaccaaactcaacgagttaattatcgaatcaagttttgaactatgtttcgaattggtttggttcattgtca 30251559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 114
Target Start/End: Complemental strand, 51432301 - 51432257
Alignment:
Q  70 aatttcgactcatttggttcatgaaccaagttcaacgaattaatt 114  Q
    |||||| |||||||||||||||||||||||| |||||| ||||||    
T  51432301 aatttcaactcatttggttcatgaaccaagtacaacgagttaatt 51432257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 115
Target Start/End: Original strand, 14796569 - 14796675
Alignment:
Q  9 gagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaa 108  Q
    ||||||||||||| ||||   |||||||| ||||||||||  ||| |||||| |     |||| ||| ||| | ||||||||||||||| ||||||||||    
T  14796569 gagtcgaactatatatagtcaaagttcaactcatttatttaacgaacttaatttaaagttcaagttcaacttaattggttcatgaaccacgttcaacgaa 14796668  T
Q  109 ttaatta 115  Q
    |||||||    
T  14796669 ttaatta 14796675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 115
Target Start/End: Original strand, 14805443 - 14805549
Alignment:
Q  9 gagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaa 108  Q
    ||||||||||||| ||||   |||||||| ||||||||||  ||| |||||| |     |||| ||| ||| | ||||||||||||||| ||||||||||    
T  14805443 gagtcgaactatatatagtcaaagttcaactcatttatttaacgaacttaatttaaagttcaagttcaacttaattggttcatgaaccacgttcaacgaa 14805542  T
Q  109 ttaatta 115  Q
    |||||||    
T  14805543 ttaatta 14805549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 114
Target Start/End: Complemental strand, 20904036 - 20904003
Alignment:
Q  81 atttggttcatgaaccaagttcaacgaattaatt 114  Q
    ||||||||||||||||||||||||||| ||||||    
T  20904036 atttggttcatgaaccaagttcaacgagttaatt 20904003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 114
Target Start/End: Complemental strand, 51432236 - 51432192
Alignment:
Q  70 aatttcgactcatttggttcatgaaccaagttcaacgaattaatt 114  Q
    |||||| ||||||||||||||||||||| || |||||| ||||||    
T  51432236 aatttcaactcatttggttcatgaaccaggtacaacgagttaatt 51432192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 14403 - 14563
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    |||||||||||||||| |||| || ||||||   ||||||||||| |||||||||| |||||||||| ||| | ||||||||||||||||||||||||||    
T  14403 aaacgagtcgaactatccataactaaagttcggctcatttatttgacgagcttaattttcgactcaagttcaaatcatttggttcatgaaccaagttcaa 14502  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
     |||| |||||||||||||||||| |||| ||||||  ||| |||||||||||||||||||    
T  14503 tgaatcaattaccgaatcgagtttcgaactattttcgggttggttcggttcattgtcagcc 14563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 8e-42; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 7 - 165
Target Start/End: Complemental strand, 18250154 - 18249996
Alignment:
Q  7 acgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacg 106  Q
    ||||||||||  |||| ||| |||||||||| ||||||||||  ||||| |||| ||| |||||| ||||||||||||||||||||||||||||||||||    
T  18250154 acgagtcgaatcatacttagttcaagttcaactcatttatttaacgagcataattttcaactcaagttcgactcatttggttcatgaaccaagttcaacg 18250055  T
Q  107 aattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    ||| ||||| |||||||||| |||||| |||||| |||| ||||||||||||| |||||    
T  18250054 aatcaattatcgaatcgagtcttgaactattttcgagttggttcggttcattgccagcc 18249996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 17025528 - 17025358
Alignment:
Q  1 aacaaaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagt 100  Q
    ||||||||||||||||| ||||  | ||||||||| | ||||||||||  |||||||||| ||| |||||| ||||||||||||||||| ||||||||||    
T  17025528 aacaaaacgagtcgaaccatactcaactcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagt 17025429  T
Q  101 tcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagccttaata 171  Q
    ||||||| | ||||| ||||||||   |||||| |||||| |||| ||||||||||||||||||| |||||    
T  17025428 tcaacgagtcaattatcgaatcgaaccttgaactattttcgagttggttcggttcattgtcagccctaata 17025358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 6 - 170
Target Start/End: Complemental strand, 21760745 - 21760581
Alignment:
Q  6 aacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaac 105  Q
    |||||||||||| ||||  ||||||||||||| ||||||||||  |||| ||| | ||| |||||| ||||||||||||||||| ||||| |||||||||    
T  21760745 aacgagtcgaaccatacgaagctcaagttcaactcatttatttaacgagtttagttttcaactcaagttcgactcatttggttcgtgaacaaagttcaac 21760646  T
Q  106 gaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagccttaat 170  Q
    |||| ||||| |||||||||||| |||| |||||| |||| |||||||||||| |||||| ||||    
T  21760645 gaatcaattatcgaatcgagtttcgaactattttcgagttggttcggttcattatcagccctaat 21760581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 9 - 165
Target Start/End: Complemental strand, 49034383 - 49034227
Alignment:
Q  9 gagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaa 108  Q
    |||||||| ||||  ||| |||||||| | ||||||||||| |||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||    
T  49034383 gagtcgaattatatgtagttcaagttcgactcatttatttgacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgaa 49034284  T
Q  109 ttaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
      |||||||||||||| ||| |||| |||||| |||| | ||||||| ||| |||||    
T  49034283 acaattaccgaatcgaatttcgaactattttcgagttggatcggttcgttgccagcc 49034227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 163
Target Start/End: Original strand, 26719797 - 26719955
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||| ||||  || |||||||||| ||||||||||  ||| |||||| ||| |||||| |||||||||||||||||||||||||||| |||    
T  26719797 aaacgagtcgaaccatactaagttcaagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaa 26719896  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcag 163  Q
     |||  ||||| |||||||||| | |||| |||||| |||| ||||| |||||||||||    
T  26719897 tgaaccaattatcgaatcgagtatcgaactattttcgagttggttcgattcattgtcag 26719955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 170
Target Start/End: Complemental strand, 33899107 - 33898942
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||| ||||  |  | |||||||| ||||||||||  |||||||||| ||| |||||| |||||||||||||||||||||||||||| |||    
T  33899107 aaacgagtcgaaccatactaaatttaagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaa 33899008  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagccttaat 170  Q
     ||| |||||  |||||||| | | |||| |||||| |||| ||||||||||||||||||| ||||    
T  33899007 tgaactaattctcgaatcgaatatcgaactattttcgagttggttcggttcattgtcagccctaat 33898942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 7 - 165
Target Start/End: Complemental strand, 35543714 - 35543559
Alignment:
Q  7 acgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacg 106  Q
    ||||||||||  |||| ||| |||||||||| |||||||||   |||||||||| ||| |||||| |||||||||||| |||||||||||||||||||||    
T  35543714 acgagtcgaatcatacttagttcaagttcaactcatttatt---cgagcttaattttcaactcaagttcgactcatttagttcatgaaccaagttcaacg 35543618  T
Q  107 aattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    ||| ||||| ||||| |||| |  ||| |||||| |||| ||||| |||||||||||||    
T  35543617 aatcaattatcgaatggagtctcaaactattttcgagttggttcgattcattgtcagcc 35543559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 170
Target Start/End: Complemental strand, 46573775 - 46573610
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||| ||||  | ||||||||| | ||||||||||  |||||||||| ||| ||| || ||||||||||||||||||||||||||||||||    
T  46573775 aaacgagtcgaaccatactcaactcaagttcgactcatttatttaacgagcttaattttcaacttaagttcgactcatttggttcatgaaccaagttcaa 46573676  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagccttaat 170  Q
    ||| | ||||| |||||||| | | |||  |||||  |||| ||||||||||||| ||||| ||||    
T  46573675 cgagtcaattatcgaatcgaatctcgaattatttttgagttggttcggttcattgccagccctaat 46573610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 159
Target Start/End: Complemental strand, 18740381 - 18740227
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||| ||||  | ||||||||| | ||||||||||  |||||||||| ||| |||||| ||||||||||||||||||||||||||||| ||    
T  18740381 aaacgagtcgaaccatactcaactcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagtttaa 18740282  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattg 159  Q
     || | ||||| | |||||| | | |||| |||||| |||| |||||||||||||    
T  18740281 tgagtcaattatcaaatcgaatctcgaactattttcgagttggttcggttcattg 18740227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 28 - 165
Target Start/End: Original strand, 36472444 - 36472581
Alignment:
Q  28 tcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagtt 127  Q
    |||||||||| | ||||||||  |||||||||| ||| |||||| |||| |||||||||||||||||||||||||||||||| | ||| ||||||||||     
T  36472444 tcaagttcaacttatttatttaacgagcttaattttcaactcaagttcggctcatttggttcatgaaccaagttcaacgaatcatttatcgaatcgagta 36472543  T
Q  128 ttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    |  |   |||||| |||| |||||||||||||||||||    
T  36472544 tcaagttattttcgagttggttcggttcattgtcagcc 36472581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 165
Target Start/End: Original strand, 32356947 - 32357103
Alignment:
Q  9 gagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaa 108  Q
    |||||||  ||||||||| | |||||||| || |||| ||  ||| ||| || ||| |||||| |||| ||||||| ||||||||| |||||||||||||    
T  32356947 gagtcgagttatacatagtttaagttcaactcgtttacttaacgaactttattttcaactcaaattcggctcatttagttcatgaatcaagttcaacgaa 32357046  T
Q  109 ttaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    ||||||| |||||||||| | |||| ||||| ||||| ||| |||||||||||||||    
T  32357047 ttaattatcgaatcgagtctcgaactatttttaagttggtttggttcattgtcagcc 32357103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 127
Target Start/End: Original strand, 45055710 - 45055832
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||||||| ||| ||||||||||| ||||||| ||  ||| |||||| ||   ||||| |||| ||| |||||||||||||||||||||||    
T  45055710 aaacgagtcgaactatatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaa 45055809  T
Q  105 cgaattaattaccgaatcgagtt 127  Q
    |||| |||||||||| |||||||    
T  45055810 cgaactaattaccgagtcgagtt 45055832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 8 - 165
Target Start/End: Original strand, 22075048 - 22075205
Alignment:
Q  8 cgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacga 107  Q
    |||||||||||||| | || |||||||||  ||||||||||  ||| |||||| |||  ||||| |||  |||||||||||| ||||||| |||||||||    
T  22075048 cgagtcgaactatatacagatcaagttcagctcatttatttaacgaacttaattttcagctcaagttcagctcatttggttcgtgaaccacgttcaacga 22075147  T
Q  108 attaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
     ||||||  ||||||||||| | ||| ||| || |||| ||||||||||||| |||||    
T  22075148 gttaattgtcgaatcgagttctaaactattatcgagttggttcggttcattgccagcc 22075205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 11595959 - 11595799
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    |||| |||||||||||| ||| |||||| |||| ||||||| ||  ||| |||||| ||   ||||| |||| ||| |||||||||||||||||||||||    
T  11595959 aaacaagtcgaactatatataactcaaggtcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaagttcaa 11595860  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    |||| |||||||||| |||||||  ||||  | ||| ||||   |||||||||||||||||    
T  11595859 cgaactaattaccgagtcgagttccgaactttattcgagttgtatcggttcattgtcagcc 11595799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 6 - 165
Target Start/End: Original strand, 7447859 - 7448018
Alignment:
Q  6 aacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaac 105  Q
    ||||| |||||| ||  |||| |||||||||| ||||||| ||  ||| |||||| |||  ||||| |||| |||||||||||||||||||||||||||     
T  7447859 aacgaatcgaaccatctatagttcaagttcaactcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcaat 7447958  T
Q  106 gaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    |||  ||||  ||| |||| || ||||| || ||| |||| |||||||||||||||||||    
T  7447959 gaaccaattgtcgagtcgaattatgaactatattcgagttggttcggttcattgtcagcc 7448018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 127
Target Start/End: Complemental strand, 40480214 - 40480091
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcattt-ggttcatgaaccaagttca 103  Q
    ||||||||||||||||| ||| ||||||||||| ||||||| ||  ||| |||||| ||   ||||| |||| ||| ||| |||||||||||||||||||    
T  40480214 aaacgagtcgaactatatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgttttggttcatgaaccaagttca 40480115  T
Q  104 acgaattaattaccgaatcgagtt 127  Q
    ||||| |||||||||| |||||||    
T  40480114 acgaactaattaccgactcgagtt 40480091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 127
Target Start/End: Original strand, 10618907 - 10619025
Alignment:
Q  9 gagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaa 108  Q
    ||||||||||||| | ||||||||||||  ||||||||||  ||| |||||| |||  ||||| |||  ||||||| ||||||||||||||||||||||     
T  10618907 gagtcgaactatatacagctcaagttcagctcatttatttaacgaacttaattttcagctcaagttcagctcatttagttcatgaaccaagttcaacgag 10619006  T
Q  109 ttaattaccgaatcgagtt 127  Q
    ||||||  |||||||||||    
T  10619007 ttaattgtcgaatcgagtt 10619025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 120
Target Start/End: Original strand, 30919405 - 30919519
Alignment:
Q  6 aacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaac 105  Q
    |||||||||||| ||||  ||||||||||||| |||||||| |  |||| ||| | ||| |||||| ||||||||||||||||| | |||||||||||||    
T  30919405 aacgagtcgaaccatacgaagctcaagttcaactcatttatctaacgagtttagttttcaactcaagttcgactcatttggttcgtaaaccaagttcaac 30919504  T
Q  106 gaattaattaccgaa 120  Q
    |||| ||||| ||||    
T  30919505 gaatcaattatcgaa 30919519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 51 - 165
Target Start/End: Original strand, 33019329 - 33019443
Alignment:
Q  51 cgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttc 150  Q
    |||| ||||| ||| |||||| ||||||| ||||| ||| ||||||||||||||||||  ||||| |||||||||| | |||| |||||  |||| ||||    
T  33019329 cgagtttaattttcaactcaagttcgacttatttgattcgtgaaccaagttcaacgaaccaattatcgaatcgagtatcgaactatttttgagttggttc 33019428  T
Q  151 ggttcattgtcagcc 165  Q
    |||||||||||||||    
T  33019429 ggttcattgtcagcc 33019443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 33935493 - 33935611
Alignment:
Q  8 cgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacga 107  Q
    |||||||||||||| | ||||||||||||  |||||| |||  ||| |||||| |||  ||||| |||  ||| ||||||||||||||||||||||||||    
T  33935493 cgagtcgaactatataaagctcaagttcatctcatttgtttaacgaacttaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacga 33935592  T
Q  108 attaattaccgaatcgagt 126  Q
     ||||||| ||||||||||    
T  33935593 gttaattatcgaatcgagt 33935611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 29037943 - 29037822
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||| ||| |||| | || ||||| |||||| |||  ||  |||||| ||| |||||| |||| |||||||||||||||||| |||||||     
T  29037943 aaacgagtcgaaccatatatagtttaaattcaactcatttgtttaacggacttaattttcaactcaagttcgtctcatttggttcatgaacaaagttcag 29037844  T
Q  105 cgaattaattaccgaatcgagt 126  Q
    | ||||||||||||||||||||    
T  29037843 caaattaattaccgaatcgagt 29037822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 165
Target Start/End: Original strand, 33124711 - 33124837
Alignment:
Q  39 tcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattt 138  Q
    ||||||||||  ||| |||||| |||  ||||| ||| | ||||||||||||| ||||||||||||||| ||||||  ||||||||||||  ||| |||     
T  33124711 tcatttatttaacgaacttaattttcagctcaagttcaattcatttggttcataaaccaagttcaacgagttaattgtcgaatcgagtttcaaactattg 33124810  T
Q  139 tcaagttcgttcggttcattgtcagcc 165  Q
    || |||| ||||||||||||| |||||    
T  33124811 tcgagttggttcggttcattgccagcc 33124837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 164
Target Start/End: Original strand, 31491813 - 31491956
Alignment:
Q  21 acatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaa 120  Q
    |||||| |||||||||| | ||||||||  ||| |||||||||    | || ||||||||||||||||||||   |||||||||||||||||||| ||||    
T  31491813 acatagttcaagttcaactaatttatttaacgaacttaatattgagtttaagttcgactcatttggttcatgtgtcaagttcaacgaattaattatcgaa 31491912  T
Q  121 tcgagttttgaacaattttcaagttcgttcggttcattgtcagc 164  Q
    |||| | |  ||| |||||  ||||  |||||||||||||||||    
T  31491913 tcgaatctcaaactatttttgagttgattcggttcattgtcagc 31491956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 165
Target Start/End: Original strand, 41449795 - 41449882
Alignment:
Q  78 ctcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    ||||||||| ||||||||||||||||||||  |||||  |||||||||||| |||| ||| || |||| |||||| ||||||||||||    
T  41449795 ctcatttggatcatgaaccaagttcaacgagataattgtcgaatcgagtttcgaactattgtcgagttggttcggatcattgtcagcc 41449882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 67 - 162
Target Start/End: Original strand, 48634491 - 48634586
Alignment:
Q  67 ctcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtca 162  Q
    ||||| ||| ||||||||||||||||||||||||||||||| |||||   ||||||||||| ||||| ||| || ||||  || ||||||||||||    
T  48634491 ctcaagttcaactcatttggttcatgaaccaagttcaacgagttaatctacgaatcgagttctgaactattgtcgagttgatttggttcattgtca 48634586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 165
Target Start/End: Complemental strand, 44422062 - 44421904
Alignment:
Q  8 cgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaa-tattcgactcaatttcgactcatttggttcatgaaccaagttcaacg 106  Q
    |||||||||||||| | ||||||||||||  |||||| |||  ||| ||||| | |||  ||||| |||  ||| |||||||||||||||||||||||||    
T  44422062 cgagtcgaactatataaagctcaagttcagctcatttgtttaacgaacttaaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacg 44421963  T
Q  107 aattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    | ||||||  ||||||||||    ||| ||| || |||| ||||||||||||| |||||    
T  44421962 agttaattgtcgaatcgagtcccaaactattgtcgagttggttcggttcattgacagcc 44421904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 124
Target Start/End: Original strand, 45176228 - 45176346
Alignment:
Q  6 aacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaac 105  Q
    ||||||||||| ||||  |||||||||||||| ||||||| ||  ||| |||||| |||  || || |||  ||| ||||||||||||||||||||||||    
T  45176228 aacgagtcgaattatatgtagctcaagttcaactcatttaattaacgaacttaattttcagctaaagttcagctcgtttggttcatgaaccaagttcaac 45176327  T
Q  106 gaattaattaccgaatcga 124  Q
    | |||||||| ||| ||||    
T  45176328 ggattaattatcgagtcga 45176346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 162
Target Start/End: Original strand, 37334264 - 37334417
Alignment:
Q  9 gagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaa 108  Q
    |||||||||||||  |||||||||||||  ||||||| ||  ||| |||||| |||  ||||| | |  ||| || |||||||||||||||||||||| |    
T  37334264 gagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacgga 37334363  T
Q  109 ttaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtca 162  Q
    |||| || |||||||| | | |||| ||  || |||| ||||||||||||||||    
T  37334364 ttaaatatcgaatcgaatgtcgaactataatcgagttggttcggttcattgtca 37334417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 159
Target Start/End: Original strand, 43052855 - 43053008
Alignment:
Q  6 aacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaac 105  Q
    ||||||||||||||||  |||||||||||||  |||| || ||  ||| |||||| |||| ||||| | |  |||||| |||||||||||||||||||||    
T  43052855 aacgagtcgaactatatgtagctcaagttcagctcatctaattaacgaacttaattttcggctcaagtccagctcattaggttcatgaaccaagttcaac 43052954  T
Q  106 gaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattg 159  Q
    | ||||| || ||| |||| | | |||| ||  || |||| |||||||||||||    
T  43052955 ggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattg 43053008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 165
Target Start/End: Original strand, 36926982 - 36927141
Alignment:
Q  6 aacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaac 105  Q
    ||||||||||||||||  |||||||||||||| ||||||| ||  ||| |||||| ||   ||||| | | |||| || |||||||||||||||||||||    
T  36926982 aacgagtcgaactatatgtagctcaagttcaactcatttaattaacgaacttaatttttagctcaagtccaactcgttaggttcatgaaccaagttcaac 36927081  T
Q  106 gaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    | ||||  || ||| |||| | | |||| ||  || |||| ||||||||||||| |||||    
T  36927082 ggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcc 36927141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 37401729 - 37401610
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||| ||||| | ||||||||| ||||  ||| ||| ||| ||| |||||| ||| |||||| || | ||||||||||||||||| |||||||||    
T  37401729 aaacgagtccaactacatatagctcaacttcagctcaattagttgacgaacttaattttcaactcaagtttggctcatttggttcatgaatcaagttcaa 37401630  T
Q  105 cgaattaattaccgaatcga 124  Q
    | ||| ||||  ||||||||    
T  37401629 caaatcaattttcgaatcga 37401610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 23237684 - 23237574
Alignment:
Q  1 aacaaaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagt 100  Q
    |||||||||||||||||| |  ||| ||||||||||| ||||||| ||  ||| ||||||  |  |||||| |||| || ||| ||||||||||||||||    
T  23237684 aacaaaacgagtcgaactgtctataactcaagttcaactcatttaattaacgaacttaattcttaactcaagttcggctaattaggttcatgaaccaagt 23237585  T
Q  101 tcaacgaatta 111  Q
     ||||||||||    
T  23237584 ccaacgaatta 23237574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 159
Target Start/End: Complemental strand, 5776292 - 5776139
Alignment:
Q  6 aacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaac 105  Q
    ||||||||||||||||  |||||||||||||  ||||||| ||  ||| |||||| |||  ||||| | |  ||| || |||||||||||||||||||||    
T  5776292 aacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaac 5776193  T
Q  106 gaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattg 159  Q
    | ||||| || ||| |||| | | |||| ||  || |||| |||||||||||||    
T  5776192 ggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattg 5776139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 162
Target Start/End: Original strand, 20400978 - 20401135
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    |||||||||||||||||  || ||||||||||  ||||||| ||   || |||||||||   ||||| |||   ||| | |||||||||||||| |||||    
T  20400978 aaacgagtcgaactatatgtaactcaagttcagctcatttaattaaagaacttaatatttagctcaagttcagttcagtaggttcatgaaccaaattcaa 20401077  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtca 162  Q
     | | |||||||||| |||| ||| |||| || ||| |||| ||||||||||||||||    
T  20401078 tggactaattaccgagtcgaatttcgaactatattcgagttggttcggttcattgtca 20401135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 111
Target Start/End: Complemental strand, 48505950 - 48505845
Alignment:
Q  6 aacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaac 105  Q
    ||||||||||||||||  |||||||||||||  ||||||| ||  ||| |||||| |||  ||||| | |  |||||| |||||||||||||||||||||    
T  48505950 aacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcattaggttcatgaaccaagttcaac 48505851  T
Q  106 gaatta 111  Q
    | ||||    
T  48505850 ggatta 48505845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 91 - 165
Target Start/End: Complemental strand, 6866758 - 6866684
Alignment:
Q  91 tgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    ||||| |||||||| ||||||||||| ||||||||| |  ||| |||||| |||| |||| ||||||||||||||    
T  6866758 tgaacaaagttcaatgaattaattactgaatcgagtctcaaactattttcgagtttgttcagttcattgtcagcc 6866684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 165
Target Start/End: Complemental strand, 222386 - 222229
Alignment:
Q  8 cgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacga 107  Q
    |||||||||||||| | ||||||||||||  |||||| |||  |||  ||||| |||   |||| |||  ||| ||||||||||||||||| ||||||||    
T  222386 cgagtcgaactatataaagctcaagttcagctcatttgtttaacgaatttaattttcagttcaagttcagctcgtttggttcatgaaccaaattcaacga 222287  T
Q  108 attaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
     ||||||  |||||| |||    ||| ||| || |||| ||||||||||||| |||||    
T  222286 gttaattgtcgaatcaagtcccaaactattgtcgagttggttcggttcattgccagcc 222229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 24128589 - 24128500
Alignment:
Q  79 tcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcctta 168  Q
    |||||||||||||||||||| |||||||| ||||||| |||||| ||||  |||  || ||| |||  ||||||||||||| || |||||    
T  24128589 tcatttggttcatgaaccaaattcaacgagttaattatcgaatcaagttccgaaatatgttcgagtgtgttcggttcattgccaacctta 24128500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 111
Target Start/End: Complemental strand, 28949920 - 28949815
Alignment:
Q  6 aacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaac 105  Q
    ||||||||||||||||  |||||||||||||  ||||||| ||  ||| |||||| ||   ||||||| |  ||| || |||||||||||||||||||||    
T  28949920 aacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaatttttagctcaattccagctcgttaggttcatgaaccaagttcaac 28949821  T
Q  106 gaatta 111  Q
    | ||||    
T  28949820 ggatta 28949815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 114
Target Start/End: Original strand, 17608703 - 17608803
Alignment:
Q  14 gaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaattaat 113  Q
    |||||| | |||| |||||||||| ||| ||| ||| ||| |||||| |||   |||| |||| |||||||||||||| |||||||||| |||||| |||    
T  17608703 gaactacatatagatcaagttcaactcaattagttgacgaacttaattttcagatcaagttcggctcatttggttcatcaaccaagttcgacgaatcaat 17608802  T
Q  114 t 114  Q
    |    
T  17608803 t 17608803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 158
Target Start/End: Complemental strand, 23227128 - 23227009
Alignment:
Q  39 tcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattt 138  Q
    ||||||||||  ||| |||||| |||  ||||| |||  |||||||| |||||| |||||||||||| |  |||||  |||||||||||| |||| |||     
T  23227128 tcatttatttaacgaacttaattttcagctcaagttcagctcatttgattcatgtaccaagttcaacaagataattgtcgaatcgagtttcgaactattg 23227029  T
Q  139 tcaagttcgttcggttcatt 158  Q
    || |||| |||||| |||||    
T  23227028 tcgagttggttcggatcatt 23227009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 158
Target Start/End: Complemental strand, 23236281 - 23236162
Alignment:
Q  39 tcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattt 138  Q
    ||||||||||  ||| |||||| |||  ||||| |||  |||||||| |||||| |||||||||||| |  |||||  |||||||||||| |||| |||     
T  23236281 tcatttatttaacgaacttaattttcagctcaagttcagctcatttgattcatgtaccaagttcaacaagataattgtcgaatcgagtttcgaactattg 23236182  T
Q  139 tcaagttcgttcggttcatt 158  Q
    || |||| |||||| |||||    
T  23236181 tcgagttggttcggatcatt 23236162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 124
Target Start/End: Original strand, 42072066 - 42072184
Alignment:
Q  6 aacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaac 105  Q
    ||||||||||||||||  |||||||||||||  ||||||| ||  ||| |||||| |||  ||||| | |  ||| || |||||||||| ||||||||||    
T  42072066 aacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaatcaagttcaac 42072165  T
Q  106 gaattaattaccgaatcga 124  Q
    | ||||  || ||||||||    
T  42072166 ggattagatatcgaatcga 42072184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 111
Target Start/End: Complemental strand, 5795098 - 5794993
Alignment:
Q  6 aacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaac 105  Q
    ||||||| ||||||||  |||||||||||||  ||||||| ||  ||| |||||| |||  ||||| | |  ||| || |||||||||||||||||||||    
T  5795098 aacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaac 5794999  T
Q  106 gaatta 111  Q
    | ||||    
T  5794998 ggatta 5794993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 124
Target Start/End: Original strand, 37106870 - 37106927
Alignment:
Q  67 ctcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatcga 124  Q
    ||||| |||| |||||||||| ||| ||| |||||| |||||||||||| ||||||||    
T  37106870 ctcaagttcggctcatttggtacattaactaagttcgacgaattaattatcgaatcga 37106927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 23223621 - 23223577
Alignment:
Q  1 aacaaaacgagtcgaactatacatagctcaagttcaattcattta 45  Q
    ||||||||||||||||||||  ||| ||||||||||| |||||||    
T  23223621 aacaaaacgagtcgaactatctataactcaagttcaactcattta 23223577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 3e-38; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 40458898 - 40459058
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    |||||||||||||||||| ||| |||||||||  ||||||||||  |||||||||| ||| |||||| ||||||||||||||||| ||||||||||||||    
T  40458898 aaacgagtcgaactatacttagttcaagttcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaa 40458997  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    | ||  |||||  ||||||||| |  ||| ||||||||||| |||||||||||||||||||    
T  40458998 caaaccaattattgaatcgagtatcaaactattttcaagttggttcggttcattgtcagcc 40459058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 5 - 168
Target Start/End: Complemental strand, 11007135 - 11006974
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    |||||||||||| ||||| ||  |||||||||| ||||||||||  |||||||||| ||| |||||| ||||||||||||||||| ||||||||||||||    
T  11007135 aaacgagtcgaattatacttatttcaagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaa 11007036  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcctta 168  Q
    ||||| ||||| || ||||||  |  ||| |||||| |||| ||||||||||||||||||||||    
T  11007035 cgaatcaattatcggatcgag--tcaaactattttcgagttggttcggttcattgtcagcctta 11006974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 8 - 165
Target Start/End: Complemental strand, 3409348 - 3409191
Alignment:
Q  8 cgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacga 107  Q
    |||||||||||||| | ||||||| ||||  ||||||||||  ||| |||||| |||  ||||| |||   |||||||||||||||||||||||||||||    
T  3409348 cgagtcgaactatatacagctcaaattcagctcatttatttaacgaacttaattttcagctcaagttcagttcatttggttcatgaaccaagttcaacga 3409249  T
Q  108 attaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
     ||||||  |||||||||||| |||| ||| || |||| ||||||||||||| |||||    
T  3409248 gttaattgtcgaatcgagtttcgaactattgtcgagttggttcggttcattgccagcc 3409191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 5 - 133
Target Start/End: Complemental strand, 2647137 - 2647009
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||||||| ||| ||||||||||| | ||||| ||  ||| |||||| ||   ||||| |||| ||| |||||||||||||||||||||||    
T  2647137 aaacgagtcgaactatatataactcaagttcaacttatttagttaacgaacttaatttttagctcaagttcggctcgtttggttcatgaaccaagttcaa 2647038  T
Q  105 cgaattaattaccgaatcgagttttgaac 133  Q
    |||| |||||||||| ||||||| |||||    
T  2647037 cgaactaattaccgagtcgagttctgaac 2647009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 30 - 164
Target Start/End: Complemental strand, 24844804 - 24844670
Alignment:
Q  30 aagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagtttt 129  Q
    |||||||  |||||||||| ||||  ||||| |||  ||||| |||  ||||||||||||||||||||||||||||||  ||||| |||||||||||||     
T  24844804 aagttcagctcatttatttatcgaatttaattttcagctcaagttcagctcatttggttcatgaaccaagttcaacgagataattgccgaatcgagtttc 24844705  T
Q  130 gaacaattttcaagttcgttcggttcattgtcagc 164  Q
    |||| ||| || |||| |||||| |||||||||||    
T  24844704 gaactattatcgagttggttcggatcattgtcagc 24844670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 165
Target Start/End: Complemental strand, 27464685 - 27464575
Alignment:
Q  55 cttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggtt 154  Q
    |||||| ||| | |||| |||||||||||||||||||||||||| |||||| ||| ||||| |||||| ||| | |||| |||||| |||| ||||||||    
T  27464685 cttaattttcaattcaagttcgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatcaagtctcgaactattttcgagttggttcggtt 27464586  T
Q  155 cattgtcagcc 165  Q
    |||||||||||    
T  27464585 cattgtcagcc 27464575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 30713133 - 30713293
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||||  | ||||||||||||||| ||| ||| ||| ||| |||||  |||  ||||  |||| ||||||||||||||||||||||||| |    
T  30713133 aaacgagtcgaactgcatatagctcaagttcaactcaattagttgacgaacttaaatttcagctcatgttcggctcatttggttcatgaaccaagttcga 30713232  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    ||||| ||||| |||||||| ||  ||||| |  || |||| ||||||||||||| |||||    
T  30713233 cgaatcaattatcgaatcgaattacgaacactaatcgagttggttcggttcattgccagcc 30713293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 9 - 166
Target Start/End: Original strand, 10412421 - 10412578
Alignment:
Q  9 gagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaa 108  Q
    |||||| | |||| ||||||||||| ||| ||||||||||  |||||||||| ||  |||||| |||||||||| | ||| | ||||| | || ||||||    
T  10412421 gagtcggattatatatagctcaagtccaactcatttatttaacgagcttaatttttaactcaagttcgactcatctagtttacgaaccgaatttaacgaa 10412520  T
Q  109 ttaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcct 166  Q
     ||||||||||||||| | | |||| |||||| |||| ||| |||||||| |||||||    
T  10412521 ctaattaccgaatcgaatctcgaactattttcgagttggtttggttcattatcagcct 10412578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 165
Target Start/End: Original strand, 29806951 - 29807043
Alignment:
Q  73 ttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    |||| |||||||||||| | ||||||||||||||||| ||||| |||||||||| |||||| |||||| | || ||||||||||||| |||||    
T  29806951 ttcggctcatttggttcgtaaaccaagttcaacgaatcaattatcgaatcgagtcttgaactattttcgaattggttcggttcattgccagcc 29807043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 1094434 - 1094533
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||| ||||  | ||||||||| | |||||||||   |||||||||| ||| |||||| |||||||||||||||||||||||||| |||||    
T  1094434 aaacgagtcgaaccatactcaactcaagttcgactcatttattcaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaaattcaa 1094533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 2328452 - 2328333
Alignment:
Q  7 acgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacg 106  Q
    ||||||||||||||| |||  |||||||||| |||||||||||  | | ||||| ||| |||||| || |||||||||   |||||||  ||||| ||||    
T  2328452 acgagtcgaactatatataattcaagttcaactcatttatttgaagggtttaattttcaactcaagtttgactcatttaaatcatgaataaagtttaacg 2328353  T
Q  107 aattaattaccgaatcgagt 126  Q
    ||||||||||||||||||||    
T  2328352 aattaattaccgaatcgagt 2328333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 13829855 - 13829974
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||| ||||  |  |||||||||| ||||||| ||  |||| ||||| ||  |||||| ||| |||||||||||| |||||||||||||||    
T  13829855 aaacgagtcgaaccatactcaattcaagttcaactcatttaattaacgagtttaatttttaactcaagttcaactcatttggtttatgaaccaagttcaa 13829954  T
Q  105 cgaattaattaccgaatcga 124  Q
    ||||| ||||| ||||||||    
T  13829955 cgaatcaattatcgaatcga 13829974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 165
Target Start/End: Complemental strand, 44740643 - 44740486
Alignment:
Q  8 cgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacga 107  Q
    |||||||||||||| | ||||||||||||  |||||| |||  ||| |||||| ||   ||||| |||  ||| ||||||||||||||||||||||||||    
T  44740643 cgagtcgaactatataaagctcaagttcagctcatttgtttaacgaacttaatttttagctcaagttcagctcgtttggttcatgaaccaagttcaacga 44740544  T
Q  108 attaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
     ||||||  ||||||||||    ||| ||| || |||| ||||||||||||| |||||    
T  44740543 gttaattgtcgaatcgagtcccaaactattgtcgagttggttcggttcattgccagcc 44740486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 11027885 - 11028001
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||||| | ||||||||||||||  ||| ||| ||| ||| |||||| ||    |||| |||| ||||||||||||||||||||||||| |    
T  11027885 aaacgagtcgaactacatatagctcaagttcagctcaattagttgacgaacttaatttttagttcaagttcggctcatttggttcatgaaccaagttcga 11027984  T
Q  105 cgaattaattaccgaat 121  Q
    ||||| ||||| |||||    
T  11027985 cgaatcaattatcgaat 11028001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 12070677 - 12070556
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    |||||||||||||||||||||| | ||||| || | |||| |||  |||  ||||| ||| |||||| ||||| |||||| ||| | ||| ||| |||||    
T  12070677 aaacgagtcgaactatacatagtttaagtttaacttatttgtttaacgaatttaattttcaactcaagttcgattcatttagttgacgaatcaaattcaa 12070578  T
Q  105 cgaattaattaccgaatcgagt 126  Q
    ||||||||||||||||| ||||    
T  12070577 cgaattaattaccgaattgagt 12070556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 27902601 - 27902442
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||||| | ||||||||||||||| ||| ||| ||| |||  ||||| |||  ||||| ||||  |||||| ||||||||||||||||| |    
T  27902601 aaacgagtcgaactacatatagctcaagttcaactcaattagttgacgat-ttaattttcagctcaagttcggttcattttgttcatgaaccaagttcga 27902503  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    ||||| ||||  |||||||| ||  ||||  |  || |||| |||||||||| ||||||||    
T  27902502 cgaatcaattgtcgaatcgatttacgaactttaatcgagttggttcggttcaatgtcagcc 27902442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 34116336 - 34116226
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||||| | ||||||||||||||  ||| ||||||  ||| |||||| ||   ||||| |||| |||||||||||||||||| |||||| |    
T  34116336 aaacgagtcgaactacatatagctcaagttcagctcaattatttagcgaacttaattttaagctcaagttcggctcatttggttcatgaactaagttcga 34116237  T
Q  105 cgaattaatta 115  Q
    | ||| |||||    
T  34116236 caaatcaatta 34116226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 124
Target Start/End: Original strand, 31000891 - 31000936
Alignment:
Q  79 tcatttggttcatgaaccaagttcaacgaattaattaccgaatcga 124  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||    
T  31000891 tcatttggttcatgaatcaagttcatcgaattaattaccgaatcga 31000936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 168
Target Start/End: Original strand, 41332270 - 41332371
Alignment:
Q  67 ctcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcct 166  Q
    ||||| ||| ||||| |||||| |||||||||||||||| | ||||||  |||||||||||| |||| || ||| |||| ||| ||||||||| || |||    
T  41332270 ctcaaattcaactcaattggtttatgaaccaagttcaacaagttaattgtcgaatcgagtttcgaactatattcgagttggtttggttcattgccaacct 41332369  T
Q  167 ta 168  Q
    ||    
T  41332370 ta 41332371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 165
Target Start/End: Original strand, 36538634 - 36538793
Alignment:
Q  6 aacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaac 105  Q
    ||||||||||||||||  ||||||||||| |  ||||||| ||  ||| |||||| |||  ||||| | | |||| || |||||||||||||||||||||    
T  36538634 aacgagtcgaactatatgtagctcaagtttagctcatttaattaacgaacttaattttcagctcaagtccaactcgttaggttcatgaaccaagttcaac 36538733  T
Q  106 gaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    | ||||  || ||| |||| | | |||| ||  || |||| ||| |||||||||||||||    
T  36538734 ggattagatatcgagtcgaatgtcgaactataatcgagttggtttggttcattgtcagcc 36538793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 127
Target Start/End: Original strand, 18667728 - 18667850
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||||||| ||| ||||||||||| | ||||||||  |||  ||||  ||   ||||| ||   ||| |||||||||||||||||||||||    
T  18667728 aaacgagtcgaactatatataactcaagttcaacttatttatttaacgaaattaagctttagctcaaattatgctcgtttggttcatgaaccaagttcaa 18667827  T
Q  105 cgaattaattaccgaatcgagtt 127  Q
      || |||||||||| |||||||    
T  18667828 taaaataattaccgagtcgagtt 18667850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 76 - 114
Target Start/End: Complemental strand, 20203806 - 20203768
Alignment:
Q  76 gactcatttggttcatgaaccaagttcaacgaattaatt 114  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  20203806 gactcatttggttcatgaaccaagttcaacgaatcaatt 20203768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 112
Target Start/End: Original strand, 26436332 - 26436438
Alignment:
Q  6 aacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaac 105  Q
    ||||||||||||||||  |||||||||||||  ||||||| ||  ||| |||||| |||  ||||  |||  ||| || |||||||||||||||||||||    
T  26436332 aacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcacgttcagctcgttaggttcatgaaccaagttcaac 26436431  T
Q  106 gaattaa 112  Q
    | |||||    
T  26436432 ggattaa 26436438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 172
Target Start/End: Original strand, 33831473 - 33831639
Alignment:
Q  6 aacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaac 105  Q
    ||||||||||||||||  |||||||||||||  ||||||| ||  ||| |||||| |||  ||||| | |  ||| || |||||||||||||| ||||||    
T  33831473 aacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaaattcaac 33831572  T
Q  106 gaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagccttaatat 172  Q
    | ||||  || ||| |||| | | |||| ||  || |||| ||||||||||||| ||||| ||||||    
T  33831573 ggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagccctaatat 33831639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 126
Target Start/End: Original strand, 28968845 - 28968918
Alignment:
Q  53 agcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagt 126  Q
    |||||||| ||| |||||| || ||||||||||||||| ||||  | |||||||| ||||||| ||||||||||    
T  28968845 agcttaattttcaactcaaatttgactcatttggttcacgaactgaattcaacgagttaattatcgaatcgagt 28968918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 32713160 - 32713055
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaag-ttca 103  Q
    ||||||||||||| ||||  || | |||||||| | ||||||||  |||||||||| ||| ||  |  |||||||||||||||||||||| |||| ||||    
T  32713160 aaacgagtcgaaccatactcagtttaagttcaaattatttatttaacgagcttaattttcaacatatgttcgactcatttggttcatgaatcaagtttca 32713061  T
Q  104 acgaat 109  Q
    ||||||    
T  32713060 acgaat 32713055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 163
Target Start/End: Original strand, 16544017 - 16544141
Alignment:
Q  39 tcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattt 138  Q
    ||||||||||  ||| |||||| ||  |||||| ||| | | ||||||||  ||||||||||||||| |||  |||| |||||||||| ||||||  |||    
T  16544017 tcatttatttaacgaacttaatttttaactcaaattcaaattatttggttggtgaaccaagttcaacaaatacattatcgaatcgagtcttgaacttttt 16544116  T
Q  139 tcaagttcgttcggttcattgtcag 163  Q
     | ||||  ||||||||||||||||    
T  16544117 ccgagttgcttcggttcattgtcag 16544141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 158
Target Start/End: Original strand, 17616306 - 17616397
Alignment:
Q  67 ctcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcatt 158  Q
    ||||| |||| ||||||||||||||| | ||| ||||||||  |||||  ||||||||||||  ||| |||||| |||| ||||| ||||||    
T  17616306 ctcaagttcggctcatttggttcatgtatcaaattcaacgagataattgtcgaatcgagtttctaactattttcgagttggttcgattcatt 17616397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 165
Target Start/End: Original strand, 27634649 - 27634808
Alignment:
Q  6 aacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaac 105  Q
    |||||||| |||||||  |||||||||||||  ||||||| ||  ||| |||||| |||  ||||| | |  ||| || ||||||||||| |||||||||    
T  27634649 aacgagtcaaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaactaagttcaac 27634748  T
Q  106 gaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    | ||||| || ||| |||| | | |||| ||  || |||| ||||||||||||| |||||    
T  27634749 ggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcc 27634808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 38409734 - 38409615
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||| ||||||||| |||| | |||||||  ||| ||| ||  | | |||||| |||  ||||| |||| ||||||||||||||||||||| ||| |    
T  38409734 aaacgagccgaactatatatagttaaagttcagctcaattagttcacaaacttaattttcagctcaagttcggctcatttggttcatgaaccaaattcga 38409635  T
Q  105 cgaattaattaccgaatcga 124  Q
    ||||| ||||  ||||||||    
T  38409634 cgaatcaattgtcgaatcga 38409615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 111
Target Start/End: Original strand, 34064683 - 34064788
Alignment:
Q  6 aacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaac 105  Q
    ||||||||||||||||  |||||||||||||  ||||||| ||  ||| |||||| |||  ||||| | |  ||| || ||||||||||| |||||||||    
T  34064683 aacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaactaagttcaac 34064782  T
Q  106 gaatta 111  Q
    | ||||    
T  34064783 ggatta 34064788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 114
Target Start/End: Original strand, 9963809 - 9963845
Alignment:
Q  78 ctcatttggttcatgaaccaagttcaacgaattaatt 114  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  9963809 ctcatttggttcatgaacccagttcaacgagttaatt 9963845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 164
Target Start/End: Complemental strand, 17369101 - 17368994
Alignment:
Q  56 ttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttc 155  Q
    ||||| ||| |||||| ||||||||||| ||||||| ||| || |||||||| ||||||  ||| | |||||  |||| || ||| |||| | |||||||    
T  17369101 ttaattttcaactcaagttcgactcatt-ggttcataaactaaattcaacgagttaattgtcgagttgagttccgaactatattcgagttggctcggttc 17369003  T
Q  156 attgtcagc 164  Q
    |||||||||    
T  17369002 attgtcagc 17368994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 107
Target Start/End: Original strand, 17503450 - 17503502
Alignment:
Q  55 cttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacga 107  Q
    |||||| ||| |||||| ||||| ||||||| || ||||||||||||||||||    
T  17503450 cttaattttcaactcaaattcgattcatttgtttaatgaaccaagttcaacga 17503502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 19 - 165
Target Start/End: Original strand, 21079 - 21224
Alignment:
Q  19 atacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccg 118  Q
    |||| |||||||||||||| ||||||||||   ||||||||| ||| |||||| |||||||| |||||||||||||||||||||||||||| ||||| ||    
T  21079 atacttagctcaagttcaactcatttatttaatgagcttaattttcaactcaagttcgactc-tttggttcatgaaccaagttcaacgaatcaattatcg 21177  T
Q  119 aatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    |||||||| | |||| |||||| |||| |||||||||||||||||||    
T  21178 aatcgagtctcgaactattttcgagttggttcggttcattgtcagcc 21224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 7e-36; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 3081881 - 3081721
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    |||||||||||||||||| ||| |||||||||  ||||||| ||  |||||||||| ||| |||||| ||||||||||||||||| ||||||||||||||    
T  3081881 aaacgagtcgaactatacttagttcaagttcagctcatttaattaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaa 3081782  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    ||||  ||||| |||||||||| | |||| |||||| || | ||||||||||||| |||||    
T  3081781 cgaaccaattatcgaatcgagtatcgaactattttcgagctggttcggttcattgccagcc 3081721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 9 - 159
Target Start/End: Original strand, 17441138 - 17441289
Alignment:
Q  9 gagtcgaactatacatagctcaagttcaat-tcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacga 107  Q
    |||||||||||| |||| |||||||||    ||||||||||| |||||||||| ||| |||||| ||| ||||||||||||||||||| |||||||||||    
T  17441138 gagtcgaactatccataactcaagttcggcctcatttatttgacgagcttaattttcaactcaagttcaactcatttggttcatgaactaagttcaacga 17441237  T
Q  108 attaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattg 159  Q
    |||||||||| |||||||||| |||| ||||||  ||| |||||||||||||    
T  17441238 attaattaccaaatcgagtttcgaactattttcgggttggttcggttcattg 17441289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 5 - 158
Target Start/End: Original strand, 7437281 - 7437434
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    |||||||||||||||||| ||| |||||||||  ||||||||||  |||||||||| ||| ||| || ||||||||||||||||| ||||||||||||||    
T  7437281 aaacgagtcgaactatacttagttcaagttcagctcatttatttaacgagcttaattttcaactaaagttcgactcatttggttcgtgaaccaagttcaa 7437380  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcatt 158  Q
    ||||   |||| |||||||||| | |||| |||||| |||| ||||||||||||    
T  7437381 cgaacccattatcgaatcgagtatcgaactattttcgagttagttcggttcatt 7437434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 13311999 - 13312161
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    |||||||| |||| ||||  || |||||||||| ||||||||||  ||| |||||| ||| |||||| |||||||||||||||||||||||||||| |||    
T  13311999 aaacgagttgaaccatactaagttcaagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaa 13312098  T
Q  105 cgaattaattaccgaatcgag--ttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
     |||  ||||| |||||||||  | | |||| |||||| |||| ||||||||||||| |||||    
T  13312099 tgaaccaattatcgaatcgagtatatcgaactattttcgagttggttcggttcattgccagcc 13312161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 165
Target Start/End: Original strand, 1501828 - 1501985
Alignment:
Q  8 cgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacga 107  Q
    |||||||||||||| | |||| |||||    ||||||||||  ||| |||||| |||  ||||| ||||  ||||||||||||||||| |||||||||||    
T  1501828 cgagtcgaactatatacagcttaagtttggctcatttatttaacgaacttaattttcagctcaagttcggttcatttggttcatgaacgaagttcaacga 1501927  T
Q  108 attaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
     ||||||  | |||||||||| |||||||| || |||| |||||||||||||||||||    
T  1501928 gttaattgtcaaatcgagtttcgaacaattgtcgagttggttcggttcattgtcagcc 1501985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 162
Target Start/End: Original strand, 18099793 - 18099950
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    |||||| | ||||||| |||||||||||||||  ||||||||||  ||| ||||||  |  |||||| ||||||||||||||||| ||||||||||||||    
T  18099793 aaacgaattgaactatgcatagctcaagttcatctcatttatttaacgaacttaattgttaactcaaattcgactcatttggttcgtgaaccaagttcaa 18099892  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtca 162  Q
    |||||  |||| |||||||||| |  |||  ||||| |||| ||| ||||||||||||    
T  18099893 cgaatccattatcgaatcgagtctcaaacttttttcgagttggtttggttcattgtca 18099950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 10961959 - 10961850
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||||| | |||| |||||||||  ||| ||| ||| ||| |||||| |||  ||||| ||||||||||||||||||||||||||||||||    
T  10961959 aaacgagtcgaactacatatagttcaagttcagctcaattagttgacgaacttaattttcagctcaaattcgactcatttggttcatgaaccaagttcaa 10961860  T
Q  105 cgaattaatt 114  Q
    ||||| ||||    
T  10961859 cgaatcaatt 10961850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 18095492 - 18095617
Alignment:
Q  1 aacaaaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagt 100  Q
    ||||||| || | ||||||| |||||||||||||||  ||||||||||  ||| |||||| ||  |||||| ||||||| ||||||||| ||||||||||    
T  18095492 aacaaaatgaattgaactatgcatagctcaagttcatctcatttatttaacgaacttaatttttaactcaagttcgacttatttggttcgtgaaccaagt 18095591  T
Q  101 tcaacgaattaattaccgaatcgagt 126  Q
    |||||||||  |||| ||||||||||    
T  18095592 tcaacgaatccattatcgaatcgagt 18095617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 5640415 - 5640255
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||||||| |||| |||||||||  ||| ||| ||| ||| |||||| |||   |||| |||| ||||||||||||||||||||||||| |    
T  5640415 aaacgagtcgaactatatatagttcaagttcagctcaattagttgacgaacttaattttcagttcaagttcggctcatttggttcatgaaccaagttcga 5640316  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    ||||| ||||| |||||||| ||  ||||  |  || |||| ||||||||||||| |||||    
T  5640315 cgaatcaattatcgaatcgaattacgaactctaatcgagttggttcggttcattgccagcc 5640255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 159
Target Start/End: Complemental strand, 4441457 - 4441310
Alignment:
Q  12 tcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaatta 111  Q
    |||||||||| | || |||||||||  ||||||||||  ||| |||||| ||| |||||| |||  ||||||| |||| |||||||||||||||||  ||    
T  4441457 tcgaactatatacagttcaagttcagctcatttatttaacgaacttaattttcaactcaagttcagctcatttagttcgtgaaccaagttcaacgagcta 4441358  T
Q  112 attaccgaatcgagttttgaacaattttcaagttcgttcggttcattg 159  Q
    |||  |||||||||||| |||| ||| || |||| |||||||||||||    
T  4441357 attgtcgaatcgagtttcgaactattgtcgagttggttcggttcattg 4441310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 127
Target Start/End: Original strand, 33110435 - 33110557
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||||||| ||| ||||||||| | ||||||| ||  ||| |||||| ||   || || |||| ||| |||||||||||||||||||||||    
T  33110435 aaacgagtcgaactatatataactcaagttcgactcatttagttaacgaacttaatctttagcttaagttcggctcgtttggttcatgaaccaagttcaa 33110534  T
Q  105 cgaattaattaccgaatcgagtt 127  Q
    |||| |||||||||| |||||||    
T  33110535 cgaactaattaccgagtcgagtt 33110557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 6999247 - 6999365
Alignment:
Q  8 cgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacga 107  Q
    |||||||||||||| | || ||||||||| ||||||| |||  | | |||||| |||  ||||| |||  ||||||| |||||| |||||||||||||||    
T  6999247 cgagtcgaactatataaagttcaagttcagttcatttgtttaacaaacttaattttcagctcaagttcagctcatttagttcattaaccaagttcaacga 6999346  T
Q  108 attaattaccgaatcgagt 126  Q
    |||||||| ||||||||||    
T  6999347 attaattatcgaatcgagt 6999365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 9950923 - 9950826
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttc 102  Q
    |||||||| |||||| | ||||||||||||||  ||| ||| ||| ||| |||||| ||| |||||| |||| |||||||||||||||||||||||||    
T  9950923 aaacgagttgaactacatatagctcaagttcagctcaattagttgacgaacttaattttcaactcaagttcggctcatttggttcatgaaccaagttc 9950826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 80 - 159
Target Start/End: Complemental strand, 11460102 - 11460023
Alignment:
Q  80 catttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattg 159  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||  |||| ||| |  |||| | |||||||||||    
T  11460102 catttggttcatgaaccaagttcaacgaatcaattatcgaatcgagttccgaactattattgagttggatcggttcattg 11460023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 30774019 - 30774101
Alignment:
Q  9 gagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcat 91  Q
    |||||| | ||||||||||| |||||||  ||||||||||  || ||||||||||| |||||| || ||||||||||||||||    
T  30774019 gagtcggattatacatagcttaagttcatctcatttatttaacgtgcttaatattcaactcaaatttgactcatttggttcat 30774101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 122
Target Start/End: Complemental strand, 13355469 - 13355414
Alignment:
Q  67 ctcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatc 122  Q
    ||||| |||| ||||||||||||| ||| ||||||||||  |||||||||||||||    
T  13355469 ctcaagttcggctcatttggttcacgaatcaagttcaacagattaattaccgaatc 13355414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 125
Target Start/End: Complemental strand, 10474449 - 10474392
Alignment:
Q  67 ctcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatcgag 125  Q
    ||||| || |||| |||||||||||||||||||| |||||  |||||||||||||||||    
T  10474449 ctcaagtttgacttatttggttcatgaaccaagtgcaacg-gttaattaccgaatcgag 10474392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 122
Target Start/End: Complemental strand, 11703614 - 11703572
Alignment:
Q  80 catttggttcatgaaccaagttcaacgaattaattaccgaatc 122  Q
    |||||||||||| ||| ||||||||| ||||||||||||||||    
T  11703614 catttggttcataaactaagttcaacaaattaattaccgaatc 11703572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 111
Target Start/End: Original strand, 10346699 - 10346804
Alignment:
Q  6 aacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaac 105  Q
    ||||||||||||||||  || ||||||||||  ||||||| ||  ||| |||||| |||  ||||| | |  ||| || |||||||||||||||||||||    
T  10346699 aacgagtcgaactatatgtaactcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaac 10346798  T
Q  106 gaatta 111  Q
    | ||||    
T  10346799 ggatta 10346804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 7e-36; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 12710679 - 12710839
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||| ||||  | ||||||||| | ||||||||||  |||||||||| ||| |||||| ||||||||||||||||||||||||||||||||    
T  12710679 aaacgagtcgaaccatactcaactcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaa 12710778  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    ||| | ||||| |||||||| | | |||| |||||| |||| ||||||||||||| |||||    
T  12710779 cgagtcaattatcgaatcgaatctcgaactattttcgagttggttcggttcattgccagcc 12710839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 30662294 - 30662134
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||||||||  | ||||||||| | ||||||||||  |||||||||| ||| |||||| ||||||||||||| ||||||||||||||||||    
T  30662294 aaacgagtcgaactatactcaactcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttgattcatgaaccaagttcaa 30662195  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    ||| | ||||| |||||||| | |  ||| |||||| |||| |||||| ||||||||||||    
T  30662194 cgagtcaattatcgaatcgaatctcaaactattttcgagttggttcggctcattgtcagcc 30662134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 40943538 - 40943698
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||| ||||  || |||||||||| ||||||||||  |||||||||| ||| |||||| |||||||||||||||||||||||||||| |||    
T  40943538 aaacgagtcgaaccatactaagttcaagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaa 40943637  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
     |||  ||||| | |||||||| | |||| |||||| |||| |||||||| |||| |||||    
T  40943638 tgaaccaattatcaaatcgagtatcgaactattttcgagttggttcggtttattgccagcc 40943698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 165
Target Start/End: Complemental strand, 9505276 - 9505124
Alignment:
Q  13 cgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaattaa 112  Q
    ||||||||| ||| ||||||||||  ||||||||||  ||| |||||| |||  ||||| ||| ||||||||||||||||||||||||||||||| ||||    
T  9505276 cgaactatatatatctcaagttcagctcatttatttaacgaacttaattttcagctcaagttcaactcatttggttcatgaaccaagttcaacgagttaa 9505177  T
Q  113 ttaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    ||  |||||||||||  |||| ||| || |||| ||||||||||||| |||||    
T  9505176 ttgtcgaatcgagttccgaactattgtcgagttggttcggttcattgccagcc 9505124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 159
Target Start/End: Complemental strand, 20550365 - 20550211
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||| |||| ||| |||||| ||| ||||||||||  |||  ||||| ||| |||||  ||||||||||||||||| ||||||||||||||    
T  20550365 aaacgagtcgaaccatacttagttcaagtacaactcatttatttaacgaatttaattttcaactcatgttcgactcatttggttcgtgaaccaagttcaa 20550266  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattg 159  Q
    | ||| ||||| |||||||||| | |||| |||||| |||| ||| |||||||||    
T  20550265 caaatcaattatcgaatcgagtatcgaactattttcgagttggtttggttcattg 20550211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 159
Target Start/End: Original strand, 52934792 - 52934943
Alignment:
Q  8 cgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacga 107  Q
    |||||||||||||| |||| ||||||||   ||||||||||  ||| |||||| |||  ||||| |||  ||||||||||||||||||||||||||| ||    
T  52934792 cgagtcgaactatatatagatcaagttcggctcatttatttaacgaacttaattttctgctcaagttcagctcatttggttcatgaaccaagttcaatga 52934891  T
Q  108 attaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattg 159  Q
     ||||||| |||||||||||  |||| ||| ||||||| |||| ||||||||    
T  52934892 gttaattatcgaatcgagttccgaactattgtcaagttggttcagttcattg 52934943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 15822512 - 15822377
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||| || ||||| ||  ||||||||   ||||||||||| |||||||||| ||| |||||| ||| ||||| |||| |||||||||||||||||    
T  15822512 aaacgagtctaattatacgtaattcaagttcggctcatttatttgacgagcttaattttcaactcaagttctactcaattggatcatgaaccaagttcaa 15822413  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttc 140  Q
    ||||  |||||||||||||| ||| |||| ||||||    
T  15822412 cgaaacaattaccgaatcgaatttcgaactattttc 15822377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 27 - 165
Target Start/End: Complemental strand, 26049681 - 26049543
Alignment:
Q  27 ctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagt 126  Q
    ||||||||| | | ||||||||  |||||||||| ||| |||||| ||||||||||||| |||||||||||||||||||   | ||||| |||||||| |    
T  26049681 ctcaagttcgactaatttatttaacgagcttaattttcaactcaagttcgactcatttgattcatgaaccaagttcaacaggtcaattatcgaatcgaat 26049582  T
Q  127 tttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
     |  ||| |||||| |||| ||||||||||||| |||||    
T  26049581 ctcaaactattttcgagttggttcggttcattgccagcc 26049543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 54393606 - 54393446
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||||| | |||| ||||||||   ||| ||||||| ||| |||||| |||  ||||| |||| ||||||||||| |||||||||||||||    
T  54393606 aaacgagtcgaactacatatagttcaagttcggctcaattatttgacgaacttaattttcagctcaagttcggctcatttggtttatgaaccaagttcaa 54393507  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    ||||| ||||  |||||||| ||  ||||  |  || |||| ||||||||||||| |||||    
T  54393506 cgaatcaattgtcgaatcgaattacgaactttaatcgagttggttcggttcattgccagcc 54393446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 33438894 - 33438734
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    |||| |||||||||| | |||| |||| || |  ||| ||| ||| ||| |||||| |||  ||||| ||||||||||||||||||||||||||||||||    
T  33438894 aaacaagtcgaactacatatagttcaactttagctcaattagttgacgaacttaattttcagctcaagttcgactcatttggttcatgaaccaagttcaa 33438795  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    ||||| ||||  |||||||| ||   |||  |  || |||| |||||||||||||||||||    
T  33438794 cgaatcaattgtcgaatcgaattacaaactttaatcgagttggttcggttcattgtcagcc 33438734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 165
Target Start/End: Original strand, 52199426 - 52199566
Alignment:
Q  25 agctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatcga 124  Q
    ||||||||||||  |||||| |||  ||| |||||| |||  ||||| |||  ||| |||||||||||||||||||||||||||||||||  ||||||||    
T  52199426 agctcaagttcagctcatttgtttaacgaacttaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacgaattaattgtcgaatcga 52199525  T
Q  125 gttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    ||    ||| ||| || |||| ||||| |||||||||||||    
T  52199526 gtcccaaactattgtcgagttggttcgattcattgtcagcc 52199566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 116
Target Start/End: Original strand, 5418659 - 5418766
Alignment:
Q  9 gagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaa 108  Q
    ||||||||||||| ||| ||||||||||| ||||||| ||  ||| |||||| ||   ||||| |||||||| |||||||||||||| ||||||||| ||    
T  5418659 gagtcgaactatatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcgactcgtttggttcatgaactaagttcaacaaa 5418758  T
Q  109 ttaattac 116  Q
     |||||||    
T  5418759 ctaattac 5418766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 28242563 - 28242682
Alignment:
Q  8 cgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacga 107  Q
    |||||||||||||| | ||||||||||||  ||||||||||  |||  ||||| |||  ||||| |||  ||||||||||||||||||||| ||||||||    
T  28242563 cgagtcgaactatatacagctcaagttcagatcatttatttaacgaatttaattttcagctcaaattcagctcatttggttcatgaaccaaattcaacga 28242662  T
Q  108 attaattaccgaatcgagtt 127  Q
     ||||||  |||||| ||||    
T  28242663 gttaattgtcgaatcaagtt 28242682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 54432354 - 54432259
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagt 100  Q
    |||||||||||||  |||  || |||||||||| ||||||||||  |||||||||| ||  |||||| |||||||||||| |||||||||||||||    
T  54432354 aaacgagtcgaaccgtactaagttcaagttcaactcatttatttaacgagcttaatttttaactcaagttcgactcatttagttcatgaaccaagt 54432259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 153
Target Start/End: Original strand, 31589615 - 31589747
Alignment:
Q  21 acatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaa 120  Q
    |||||||||||||||||  | |||||||  | | |||||| ||| |||||| || |||| |||||||| ||||||||||| ||| ||||| |||||||||    
T  31589615 acatagctcaagttcaacccgtttatttaacaaacttaattttcaactcaagtttgacttatttggtttatgaaccaagtccaatgaattgattaccgaa 31589714  T
Q  121 tcgagttttgaacaattttcaagttcgttcggt 153  Q
    || | |||||||  |||||  |||| |||||||    
T  31589715 tcaaattttgaattattttggagttggttcggt 31589747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 145
Target Start/End: Complemental strand, 48731000 - 48730860
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    |||||| ||||||||||| ||  | | |||||| |||||||||| ||||| ||||| ||  ||| || || |||| |||||||||||||| |||||| ||    
T  48731000 aaacgaatcgaactatacttaatttatgttcaactcatttatttatcgagtttaattttgcacttaagtttgacttatttggttcatgaatcaagtttaa 48730901  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagtt 145  Q
    ||||||||||| | |||||| | | |||| |||||| ||||    
T  48730900 cgaattaattagcaaatcgaatctcgaactattttcgagtt 48730860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 165
Target Start/End: Original strand, 32689147 - 32689306
Alignment:
Q  6 aacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaac 105  Q
    ||||||||||||||||  |||||||||||||  ||||||| ||  ||| |||||| |||  ||||| | |  ||| || |||||||||||||||||||||    
T  32689147 aacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaac 32689246  T
Q  106 gaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    | ||||  || ||| |||| | | |||| ||  || |||| |||||||||||||||||||    
T  32689247 ggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcagcc 32689306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 164
Target Start/End: Original strand, 26136371 - 26136469
Alignment:
Q  66 actcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagc 164  Q
    |||||| |||| |||| || |||||| ||||||||||||| || |||||| |||||||||| |  ||| ||| ||||||| ||| ||||||||||||||    
T  26136371 actcaagttcggctcacttagttcataaaccaagttcaacaaactaattaacgaatcgagtctcaaactattatcaagttggttgggttcattgtcagc 26136469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 162
Target Start/End: Complemental strand, 1072872 - 1072715
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||| ||||||||| ||| |||||||||| ||||||   ||  | | |||||| |||| |||||  || |||||||||||||||||||  ||| |||    
T  1072872 aaacgaggcgaactatatataactcaagttcagttcattatattaacaaacttaattttcggctcaaactcaactcatttggttcatgaacttagtccaa 1072773  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtca 162  Q
    ||||| ||||| ||| ||||||||  ||   | |||||||||| |||||| |||||||    
T  1072772 cgaatcaattatcgagtcgagtttcaaaatttgttcaagttcgctcggtttattgtca 1072715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 46293376 - 46293216
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    |||||| |||||||||  |||| | |||||||| ||||||| ||  ||| |||||| |||  ||||| |||| ||||||||||||||||||||| |||||    
T  46293376 aaacgaatcgaactatttatagtttaagttcaactcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaaattcaa 46293277  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
       |  ||||  | | |||| |||||||| || ||| ||||  ||||||||||||||||||    
T  46293276 ttgaccaattgtcaagtcgaattttgaactatattcgagttgattcggttcattgtcagcc 46293216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 165
Target Start/End: Complemental strand, 19560856 - 19560777
Alignment:
Q  86 gttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    |||||||||||||||||||||||||||||  ||| |||| ||  |||| || ||| |||| ||||||||||||| |||||    
T  19560856 gttcatgaaccaagttcaacgaattaattgtcgagtcgaattccgaactatattcgagttggttcggttcattgccagcc 19560777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 165
Target Start/End: Original strand, 39135356 - 39135491
Alignment:
Q  30 aagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagtttt 129  Q
    |||||||  ||||||| ||  ||| |||||| |||  ||||| |||| ||||||||||||||||||||||||||| |||  ||||  ||| |||| || |    
T  39135356 aagttcagctcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcaatgaaccaattgtcgagtcgaattat 39135455  T
Q  130 gaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    |||| || ||| |||| |||||||| |||| |||||    
T  39135456 gaactatattcgagttggttcggtttattgccagcc 39135491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 159
Target Start/End: Complemental strand, 39942963 - 39942809
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||| | ||  ||| ||||||||||  |||| |||||  ||| |||||| |||  ||||| |||  ||||||  |||||||||||||||||||    
T  39942963 aaacgagtcgagccatctataactcaagttcagctcatctatttaacgaacttaattttcagctcaagttcagctcattaagttcatgaaccaagttcaa 39942864  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattg 159  Q
    |  ||||||| ||||||||| ||| |||| ||  || |||| |||| ||||||||    
T  39942863 cagattaattgccgaatcgaatttcgaactatactcgagttggttcagttcattg 39942809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 112
Target Start/End: Original strand, 41609866 - 41609972
Alignment:
Q  6 aacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaac 105  Q
    ||||||||||||||||  |||||||||||||  ||||||| ||  ||| |||||| |||  ||||| | |  ||| || |||||||||||||||||||||    
T  41609866 aacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaac 41609965  T
Q  106 gaattaa 112  Q
    | |||||    
T  41609966 ggattaa 41609972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 158
Target Start/End: Original strand, 1674678 - 1674759
Alignment:
Q  77 actcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcatt 158  Q
    ||||||||||||||||||||||||||||| |  |||||   ||||||| || ||||| ||| || |||| ||||||||||||    
T  1674678 actcatttggttcatgaaccaagttcaacaagataattgttgaatcgaattctgaactattgtcgagttggttcggttcatt 1674759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 18074553 - 18074674
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    |||| ||| ||| |||| ||||||||| ||||  ||||||| ||  ||| |||||| |||   |||| ||| |||||||| ||||||||| ||| |||||    
T  18074553 aaacaagttgaattatatatagctcaatttcagctcatttagttaacgaacttaattttcagttcaaattcaactcatttagttcatgaaacaaattcaa 18074652  T
Q  105 cgaattaattaccgaatcgagt 126  Q
    ||||||||||| | ||||||||    
T  18074653 cgaattaattatcaaatcgagt 18074674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 44574503 - 44574663
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||| |||||||||  ||||||||||||   ||||||| |   ||| ||| || ||  |||||| |||  |||||| |||||| |||| ||||||||    
T  44574503 aaacgagccgaactatatgtagctcaagttcggctcatttaataaacgaacttgatttttaactcaagttcagctcattaggttcacgaactaagttcaa 44574602  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    |||||||||| |||| ||||| || |||| || ||| ||||   ||||||||||| |||||    
T  44574603 cgaattaattgccgagtcgagcttcgaactatattcgagttgtctcggttcattgccagcc 44574663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 50965383 - 50965491
Alignment:
Q  8 cgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaa-tattcgactcaatttcgactcatttggttcatgaaccaagttcaacg 106  Q
    |||||||||| ||| ||||||||||||||  ||||||||||  ||| ||||| | |||  ||||| |||  |||||| |||||||||||||| || ||||    
T  50965383 cgagtcgaaccatatatagctcaagttcagctcatttatttaacgaacttaatttttcagctcaaattcagctcattaggttcatgaaccaaatttaacg 50965482  T
Q  107 aattaatta 115  Q
    || ||||||    
T  50965483 aactaatta 50965491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 51068518 - 51068626
Alignment:
Q  8 cgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaa-tattcgactcaatttcgactcatttggttcatgaaccaagttcaacg 106  Q
    |||||||||| ||| ||||||||||||||  ||||||||||  ||| ||||| | |||  ||||| |||  |||||| |||||||||||||| || ||||    
T  51068518 cgagtcgaaccatatatagctcaagttcagctcatttatttaacgaacttaatttttcagctcaaattcagctcattaggttcatgaaccaaatttaacg 51068617  T
Q  107 aattaatta 115  Q
    || ||||||    
T  51068618 aactaatta 51068626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 165
Target Start/End: Original strand, 25253752 - 25253839
Alignment:
Q  78 ctcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    |||||||||||||||||||||||||||| | || |||  ||| |||||||   ||| || ||| |||| ||||||||||||| |||||    
T  25253752 ctcatttggttcatgaaccaagttcaacaagtttattgtcgagtcgagttccaaactatattcgagttggttcggttcattgccagcc 25253839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 165
Target Start/End: Complemental strand, 54432255 - 54432180
Alignment:
Q  90 atgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    ||||||||||| ||| |||  ||||| |||||||||| | |||| |||||| |||| ||||||||||||| |||||    
T  54432255 atgaaccaagtccaatgaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgccagcc 54432180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 165
Target Start/End: Complemental strand, 39469632 - 39469534
Alignment:
Q  67 ctcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    ||||| |||| |||||||| |||||||||||||||||| | |  ||||| |||||||| ||  |||| || ||| |||| |||| ||||||| ||||||    
T  39469632 ctcaagttcggctcatttgattcatgaaccaagttcaatggaccaattatcgaatcgaattacgaactatattcgagttggttcagttcattatcagcc 39469534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 107
Target Start/End: Original strand, 30743622 - 30743651
Alignment:
Q  78 ctcatttggttcatgaaccaagttcaacga 107  Q
    ||||||||||||||||||||||||||||||    
T  30743622 ctcatttggttcatgaaccaagttcaacga 30743651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 124
Target Start/End: Original strand, 45714735 - 45714792
Alignment:
Q  67 ctcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatcga 124  Q
    ||||| ||||||||||||| || ||||| |||||||||||||| ||||  ||||||||    
T  45714735 ctcaagttcgactcatttgatttatgaatcaagttcaacgaatcaattgtcgaatcga 45714792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 109
Target Start/End: Complemental strand, 928 - 826
Alignment:
Q  7 acgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacg 106  Q
    |||||||||| ||||| |||||||||||||| ||||||||||  |||||||||| ||| || ||| ||| ||||||||||||||||||||||||||||||    
T  928 acgagtcgaattatacttagctcaagttcaactcatttatttaacgagcttaattttcaacccaaattcaactcatttggttcatgaaccaagttcaacg 829  T
Q  107 aat 109  Q
    |||    
T  828 aat 826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 7 - 159
Target Start/End: Complemental strand, 32944 - 32794
Alignment:
Q  7 acgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacg 106  Q
    ||||||||||| ||||  || |||||||||||||||||||||  |||||||||| | | |||||| |||||||||||||||   ||||||||||||||||    
T  32944 acgagtcgaaccatactaagttcaagttcaattcatttatttaacgagcttaatttacaactcaagttcgactcatttggt--gtgaaccaagttcaacg 32847  T
Q  107 aattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattg 159  Q
    ||  ||||  |||||||||| | |||| |||||| |||| |||||||||||||    
T  32846 aaccaattgtcgaatcgagtatcgaactattttcgagttggttcggttcattg 32794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 4e-25; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 1091711 - 1091825
Alignment:
Q  12 tcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaatta 111  Q
    ||||||||||| | |||||||||||| |||||| |||| ||| |||||| ||  |||||  |||||||| ||||||||||||| ||||||||||||||||    
T  1091711 tcgaactatacttggctcaagttcaactcatttgtttgacgaacttaattttaaactcaggttcgactcgtttggttcatgaatcaagttcaacgaatta 1091810  T
Q  112 attaccgaatcgagt 126  Q
    |||| ||||||||||    
T  1091811 attatcgaatcgagt 1091825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 165
Target Start/End: Original strand, 3307914 - 3308071
Alignment:
Q  8 cgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacga 107  Q
    |||||||||||||| | |||||||||||   ||||||||||  ||| |||||| |||  ||||| |||| |||||||||||||||||| |||||| ||||    
T  3307914 cgagtcgaactatatacagctcaagttcggctcatttatttaacgaacttaattttctgctcaagttcggctcatttggttcatgaactaagttctacga 3308013  T
Q  108 attaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
     ||||||  |||||||||||  |||| ||| || |||| ||||||||||||| |||||    
T  3308014 gttaattgtcgaatcgagttccgaactattgtcgagttggttcggttcattgccagcc 3308071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 22563983 - 22564100
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    |||||||||||| ||||  ||| ||||||||  |||||| ||||| |||||||||| ||| |||||| ||||| | ||||||||||||||||||||||||    
T  22563983 aaacgagtcgaattatatgtagttcaagttcggttcattcatttgacgagcttaattttcaactcaagttcgatttatttggttcatgaaccaagttcaa 22564082  T
Q  105 cgaattaattaccgaatc 122  Q
    ||||  ||||||||||||    
T  22564083 cgaaacaattaccgaatc 22564100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 159
Target Start/End: Original strand, 43384833 - 43384925
Alignment:
Q  67 ctcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattg 159  Q
    ||||| ||| |||||||||||||||||||||| |||||||||||||||| |||||||| | | |||| |||||| |||| |||||||||||||    
T  43384833 ctcaagttcaactcatttggttcatgaaccaacttcaacgaattaattatcgaatcgaatctcgaactattttcgagttggttcggttcattg 43384925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 43967487 - 43967647
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||||||| ||| ||||||||||| ||||||| ||  ||| |||||| ||   ||||| |||| ||| ||||||||||||||||| |||||    
T  43967487 aaacgagtcgaactatatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaaattcaa 43967586  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    |||| ||||||| || |||||||  ||||  | ||||||||   ||||||||||| |||||    
T  43967587 cgaactaattactgagtcgagttccgaactttgttcaagttgtatcggttcattgccagcc 43967647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 27 - 122
Target Start/End: Complemental strand, 27189223 - 27189128
Alignment:
Q  27 ctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatc 122  Q
    ||||||||||| ||| ||| ||| ||| |||||| |||  ||||| |||||||||||||||||||||||||||||| |||||| ||||| ||||||    
T  27189223 ctcaagttcaactcaattagttgacgaacttaattttcagctcaagttcgactcatttggttcatgaaccaagttcgacgaatcaattatcgaatc 27189128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 127
Target Start/End: Original strand, 34655012 - 34655134
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||||||| ||| |||||||| || ||||||| ||  | | |||||| ||   ||||| |||||||| |||||||||||||| ||||||||    
T  34655012 aaacgagtcgaactatatataactcaagtttaactcatttagttaacaaacttaatctttagctcaagttcgactcgtttggttcatgaactaagttcaa 34655111  T
Q  105 cgaattaattaccgaatcgagtt 127  Q
    | || |||||||||| |||||||    
T  34655112 caaactaattaccgagtcgagtt 34655134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 68 - 165
Target Start/End: Original strand, 39478090 - 39478187
Alignment:
Q  68 tcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    |||| ||| |||||||||||||||||||||||| ||| |||  ||||| |||||||||| | |||| |||||| |||| ||||||||||||| |||||    
T  39478090 tcaagttcaactcatttggttcatgaaccaagtccaatgaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgccagcc 39478187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 165
Target Start/End: Original strand, 453461 - 453620
Alignment:
Q  6 aacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaac 105  Q
    ||||||||||||||||  |||||||||||||| ||||||| ||  ||| |||||| ||| |||||| | |  ||| || |||||||||||||||||||||    
T  453461 aacgagtcgaactatatgtagctcaagttcaactcatttaattaacgaacttaattttcaactcaagtccagctcgttaggttcatgaaccaagttcaac 453560  T
Q  106 gaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    | ||||  || ||| |||| | | |||| ||  || |||| ||||||||||||| |||||    
T  453561 ggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcc 453620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 33280140 - 33279980
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||| ||||| | |||| |||||||||  ||| ||| ||| ||| |||||| ||   ||||  |||| ||||||||||||||||||||||||| |    
T  33280140 aaacgagtctaactacatatagttcaagttcagctcaattagttgacgaacttaattttaagctcatattcggctcatttggttcatgaaccaagttcga 33280041  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcagcc 165  Q
    ||||| ||||| |||||| | ||  ||||  |  || |||| |||||||||||||||||||    
T  33280040 cgaatcaattatcgaatcaaattacgaactttaatcgagttggttcggttcattgtcagcc 33279980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 67 - 162
Target Start/End: Original strand, 12378391 - 12378486
Alignment:
Q  67 ctcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtca 162  Q
    ||||| ||| ||||||||||||| ||||||||||||||||||| ||||| |||| ||| | | | || |||||  |||| ||||||||||||||||    
T  12378391 ctcaagttcaactcatttggttcgtgaaccaagttcaacgaatcaattatcgaaccgaatctcggactatttttgagtttgttcggttcattgtca 12378486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 159
Target Start/End: Original strand, 11161550 - 11161703
Alignment:
Q  6 aacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaac 105  Q
    ||||||||||||||||  |||||||||||||  ||||||| ||  ||| |||||| |||  ||||| | |  ||| || |||||||||||||||||||||    
T  11161550 aacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaac 11161649  T
Q  106 gaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattg 159  Q
    | ||||| || ||| |||| | | |||| ||  ||||||| ||| |||||||||    
T  11161650 ggattaaatatcgagtcgaatgtcgaactataatcaagttggtttggttcattg 11161703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 17865490 - 17865429
Alignment:
Q  66 actcaatttcgactcatttggttcatgaaccaagttcaacgaattaattaccgaatcgagtt 127  Q
    |||||| |||| ||| |||||||||||||||||||| |||||| |||||||||| |||||||    
T  17865490 actcaagttcggctcgtttggttcatgaaccaagttaaacgaactaattaccgagtcgagtt 17865429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 43384811 - 43384850
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcattt 44  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  43384811 aaacgagtcgaactatacatagctcaagttcaactcattt 43384850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 107
Target Start/End: Complemental strand, 9412687 - 9412585
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    |||||||||||| |||| ||| ||||| ||||  |||||||| |  |||  |||||  || |||||| |||  |||||||||||||||||||||||||||    
T  9412687 aaacgagtcgaattatatataactcaaattcagctcatttatgtaacgaatttaattctcaactcaagttcagctcatttggttcatgaaccaagttcaa 9412588  T
Q  105 cga 107  Q
    |||    
T  9412587 cga 9412585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 127
Target Start/End: Original strand, 23181132 - 23181254
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||||| |  ||| |||||||||  ||| ||| ||  ||| |||||| |||   |||| |||| ||||||||||||||||||||| ||| |    
T  23181132 aaacgagtcgaactacatctagttcaagttcagctcaattagtttacgaacttaattttcagttcaagttcggctcatttggttcatgaaccaaattcga 23181231  T
Q  105 cgaattaattaccgaatcgagtt 127  Q
    ||||| ||||  |||||||||||    
T  23181232 cgaatcaattgtcgaatcgagtt 23181254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 28492748 - 28492707
Alignment:
Q  81 atttggttcatgaaccaagttcaacgaattaattaccgaatc 122  Q
    ||||||||||||||||||||| |||||| |||||||||||||    
T  28492748 atttggttcatgaaccaagtttaacgaactaattaccgaatc 28492707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 34516115 - 34516224
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||||| | |||| |||||||||  ||| ||| | | ||| |||||| |||  ||||| |||| ||||||||||| ||||| |||||||||    
T  34516115 aaacgagtcgaactacatatagttcaagttcagctcaattaatcgacgaacttaattttcagctcaagttcggctcatttggttgatgaatcaagttcaa 34516214  T
Q  105 cgaattaatt 114  Q
     |||| ||||    
T  34516215 tgaatcaatt 34516224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 120
Target Start/End: Complemental strand, 43955926 - 43955884
Alignment:
Q  78 ctcatttggttcatgaaccaagttcaacgaattaattaccgaa 120  Q
    ||||||||||||||||||||| || ||||||||||||| ||||    
T  43955926 ctcatttggttcatgaaccaaattaaacgaattaattatcgaa 43955884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 159
Target Start/End: Complemental strand, 51461 - 51311
Alignment:
Q  9 gagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaa 108  Q
    ||||||||||| |||||  |||||||||| ||||||||||  | |||||||| ||  | |||  |||||||||||||||||| |||| ||||||||||||    
T  51461 gagtcgaactacacataattcaagttcaactcatttatttaacaagcttaattttaaaatcacgttcgactcatttggttcacgaactaagttcaacgaa 51362  T
Q  109 ttaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattg 159  Q
    ||| |||||||| ||| | | |||| |||||| || | |||||||||||||    
T  51361 ttatttaccgaaccgaatctcgaactattttcgagctagttcggttcattg 51311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 163
Target Start/End: Original strand, 96257 - 96415
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    |||||||||||| || ||||| ||||||||||| ||||||||||  |||||||||| ||  ||| || || ||||||||||||||| |||  ||||||||    
T  96257 aaacgagtcgaattacacataactcaagttcaactcatttatttaacgagcttaattttgaacttaagttggactcatttggttcacgaattaagttcaa 96356  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcag 163  Q
     |||||| ||| |||| ||| | | |||| |||||| || | |||||||||||||||||    
T  96357 tgaattatttaacgaaccgaatctcgaactattttcgagctagttcggttcattgtcag 96415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 26784 - 26684
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||||||| | |||||| |||||||  ||| ||| ||| ||| |||||| |||  ||||| ||||||||||||| ||||||||||||||||||    
T  26784 aaacgagtcgaactacatatagcttaagttcagctcaattagttgacgaacttaattttcagctcaagttcgactcatttgattcatgaaccaagttcaa 26685  T
Q  105 c 105  Q
    |    
T  26684 c 26684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 7471 - 7352
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||||||||| ||||| || | |||||||||  ||| ||| ||  ||| |||||| |||  ||||| |||| ||||||||||||||||||||||||| |    
T  7471 aaacgagtcgacctatatatggttcaagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcatttggttcatgaaccaagttcga 7372  T
Q  105 cgaattaattaccgaatcga 124  Q
    ||||| ||||| ||||||||    
T  7371 cgaatcaattatcgaatcga 7352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 159
Target Start/End: Original strand, 11446 - 11600
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    |||||||||||| |||| |||| |||| ||||  ||||||| ||  ||| |||||| |||  || || |||| ||||||||||  ||||| |||||||||    
T  11446 aaacgagtcgaattatatatagttcaaattcagctcatttaattaacgaacttaattttcatctgaagttcggctcatttggtatatgaatcaagttcaa 11545  T
Q  105 cgaattaattaccgaatcgagttttgaacaattttcaagttcgttcggttcattg 159  Q
    ||||||||||| ||| || | |||| ||| || ||| |||| |||||||||||||    
T  11546 cgaattaattatcgagtcaaattttaaactatgttcgagttggttcggttcattg 11600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 17208 - 17329
Alignment:
Q  1 aacaaaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagt 100  Q
    |||||||||||| |||||| ||||| ||  ||||||| ||||||||||  |||||||||| ||  | ||||  ||||||||||||||||| |||  ||||    
T  17208 aacaaaacgagttgaactacacataactttagttcaactcatttatttaacgagcttaattttgaattcaagctcgactcatttggttcacgaattaagt 17307  T
Q  101 tcaacgaattaattaccgaatc 122  Q
    |||| | |||| ||||||||||    
T  17308 tcaatggattatttaccgaatc 17329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0954 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 351 - 241
Alignment:
Q  1 aacaaaacgagtcgaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagt 100  Q
    |||||||||||||||||| |  ||| ||||||||||| ||||||| ||  ||| ||||||  |  |||||| |||| || ||| ||||||||||||||||    
T  351 aacaaaacgagtcgaactgtctataactcaagttcaactcatttaattaacgaacttaattcttaactcaagttcggctaattaggttcatgaaccaagt 252  T
Q  101 tcaacgaatta 111  Q
     ||||||||||    
T  251 ccaacgaatta 241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 163
Target Start/End: Original strand, 11376 - 11525
Alignment:
Q  14 gaactatacatagctcaagttcaattcatttatttgtcgagcttaatattcgactcaatttcgactcatttggttcatgaaccaagttcaacgaattaat 113  Q
    |||||||| |||||| ||||||   ||||||||||  ||| |||||| ||  ||| || |||  |||||||||||||||||| |||||| ||||  ||||    
T  11376 gaactatatatagcttaagttcggctcatttatttaacgaacttaatttttaacttaagttcacctcatttggttcatgaactaagttcgacgaggtaat 11475  T
Q  114 taccgaatcgagttttgaacaattttcaagttcgttcggttcattgtcag 163  Q
    |  |||||||||||   ||| ||| || |||| |||||||||||||||||    
T  11476 tgtcgaatcgagttccaaactattatcgagttggttcggttcattgtcag 11525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 104
Target Start/End: Complemental strand, 124582 - 124545
Alignment:
Q  67 ctcaatttcgactcatttggttcatgaaccaagttcaa 104  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  124582 ctcaagttcgactcatttggttcatgaaccaagttcaa 124545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1787 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1787
Description:

Target: scaffold1787; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 28 - 72
Alignment:
Q  5 aaacgagtcgaactatacatagctcaagttcaattcatttatttg 49  Q
    |||||||||||||||| |||| ||||||||| | |||||||||||    
T  28 aaacgagtcgaactatccataactcaagttcgactcatttatttg 72  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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