View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8125_low_14 (Length: 235)
Name: NF8125_low_14
Description: NF8125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8125_low_14 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 13 - 235
Target Start/End: Complemental strand, 12140344 - 12140122
Alignment:
| Q |
13 |
ataacttcatcaaaagtaacagtttattgggatttttggtacgtgtaaataaccttaaaacaacaactatacaagaatttattagctcatgtataagcct |
112 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
12140344 |
ataacttcatcaaaagtaacagtttattgggatttttggtacgtgtaaatacacttaaaacaacaactatacaagaatttattagctcatgtataagctt |
12140245 |
T |
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| Q |
113 |
atgatctaccctcctattcgttgccagtttcgcaagcctatgatcatagacaaacattatccatattaaaagttctgttcagaaatttaccctgatcagc |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12140244 |
atgatctaccctcctattcgttgccagtttcgcaagcctatgatcatagacatacattatccatattaaaagttctgttcagaaatttaccctgatcagc |
12140145 |
T |
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| Q |
213 |
agctaacgaatccgagcttgatt |
235 |
Q |
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||||||||||||||||||||||| |
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| T |
12140144 |
agctaacgaatccgagcttgatt |
12140122 |
T |
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