View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8127_high_2 (Length: 816)

Name: NF8127_high_2
Description: NF8127
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8127_high_2
NF8127_high_2
[»] chr6 (5 HSPs)
chr6 (18-804)||(2386010-2386795)
chr6 (582-630)||(24333044-24333092)
chr6 (583-624)||(3525236-3525277)
chr6 (585-626)||(4308887-4308928)
chr6 (585-622)||(31776191-31776228)
[»] chr2 (6 HSPs)
chr2 (584-626)||(37276854-37276896)
chr2 (585-626)||(37419586-37419627)
chr2 (584-626)||(1830149-1830191)
chr2 (584-630)||(15370241-15370287)
chr2 (586-623)||(40059381-40059418)
chr2 (586-623)||(40085281-40085318)
[»] chr4 (8 HSPs)
chr4 (583-616)||(28615454-28615487)
chr4 (583-626)||(679401-679444)
chr4 (583-630)||(41433481-41433528)
chr4 (585-628)||(53034718-53034761)
chr4 (584-626)||(22662169-22662211)
chr4 (584-626)||(22666648-22666690)
chr4 (583-624)||(27043747-27043788)
chr4 (585-618)||(52428782-52428815)
[»] chr3 (4 HSPs)
chr3 (583-624)||(25447162-25447203)
chr3 (583-624)||(36507009-36507050)
chr3 (583-625)||(47903997-47904039)
chr3 (587-624)||(26911703-26911740)
[»] chr8 (2 HSPs)
chr8 (587-630)||(39551130-39551173)
chr8 (583-616)||(10727464-10727497)
[»] chr7 (4 HSPs)
chr7 (583-630)||(28691753-28691800)
chr7 (583-630)||(41040271-41040318)
chr7 (587-624)||(9210933-9210970)
chr7 (583-624)||(37064385-37064426)
[»] chr5 (3 HSPs)
chr5 (587-634)||(18286893-18286940)
chr5 (584-626)||(3280654-3280696)
chr5 (583-624)||(32197845-32197886)
[»] chr1 (4 HSPs)
chr1 (591-630)||(4200340-4200379)
chr1 (584-634)||(37241739-37241788)
chr1 (585-626)||(6292602-6292643)
chr1 (583-616)||(30013996-30014029)


Alignment Details
Target: chr6 (Bit Score: 743; Significance: 0; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 743; E-Value: 0
Query Start/End: Original strand, 18 - 804
Target Start/End: Original strand, 2386010 - 2386795
Alignment:
Q  18 agtaatttcacaatggaagcatttcaatgcagattctttaatacttttaaacattttcgtgaaaggcttcttatcttgaagatcatcatcatcttgttct 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2386010 agtaatttcacaatggaagcatttcaatgcagattctttaatacttttaaacattttcgtgaaaggctttttatcttgaagatcatcatcatcttgttct 2386109  T
Q  118 ttatacgaatatatagagcttccactagagaaaatcaagatagaaagaagcatcgaaatcgcaggtatagcaaaccctattacccaaccaaatgtatctt 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2386110 ttatacgaatatatagagcttccactagagaaaatcaagatagaaagaagcatcgaaatcgcaggtatcgcaaaccctattacccaaccaaatgtatctt 2386209  T
Q  218 ggatgtaagacatgactgttacacccattaggcttccagcacaaacaccaaaataccaccattgaaagaaaagtgcttttttgttgctacttgtatcatc 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2386210 ggatgtaagacatgactgttacacccattaggcttccagcacaaacaccaaaataccaccattgaaagaaaagtgcttttttgttgctacttgtatcatc 2386309  T
Q  318 tgtgttactacaaggtagttcttcatcttcaccaagttgatcagctccaaaggcttgtagagatggattatatccaccttggcctaatgagattaaatag 417  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2386310 tgtgttactacaaggtagttcttcatcttcaccaagttgatcagctccaaaggcttgtagagatggattatatccaccttggcctaatgagattaaatag 2386409  T
Q  418 agagataatgaaagaaatgaagatgacattgatctgtttttgtgatgccatgatcttgctagggctgttgttgtcaatgctgcaagtccctataggaaga 517  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2386410 agagataatgaaagaaatgaagatgacattgatctgtttttgtgatgccatgatcttgctagggctgttgttgtcaatgctgcaagtccctataggaaga 2386509  T
Q  518 aaacacaagaaaaaatgtcaataactagtgaagaaaaagttgaatattcaaattaacagtaactttctgtttggattgacttatttaagtttatctactg 617  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  2386510 aaacacaagaaaaaatgtcaataactagtgaagaaaaagttgaatattcaaattaacagtaactttctgtttggattgacttatttaagtttatctacag 2386609  T
Q  618 atataagcatttgcgagcctttttgagaatatacagaaacagcttaaaaaatatccatgtgtagttttcagcttactttcataagccctcaaggactagc 717  Q
    | |  ||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||    
T  2386610 a-aacagcatttgcgagcctttttgagaatatacagaaacagcttaaaaaatgtccattcgtagttttcagcttactttcataagccctcaaggactagc 2386708  T
Q  718 ttatgataacatcttatatgaattgtgtgtttctcaaattagtagcattgtcgttgtgtcagtgtctgtgtcgtgtatgatgtccat 804  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  2386709 ttatgataacatcttatatgaattgtgtgtttctcaaattagtagcattgtcgttgtgtcagtgtctgtgtcgtgtctgatgtccat 2386795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 582 - 630
Target Start/End: Complemental strand, 24333092 - 24333044
Alignment:
Q  582 ttctgtttggattgacttatttaagtttatctactgatataagcatttg 630  Q
    |||||||||||||||| ||||| ||||||| |||||| |||||||||||    
T  24333092 ttctgtttggattgacatatttcagtttatgtactgacataagcatttg 24333044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 583 - 624
Target Start/End: Complemental strand, 3525277 - 3525236
Alignment:
Q  583 tctgtttggattgacttatttaagtttatctactgatataag 624  Q
    |||||||||||||||| ||||||||||||||| ||| |||||    
T  3525277 tctgtttggattgactaatttaagtttatctagtgacataag 3525236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 585 - 626
Target Start/End: Complemental strand, 4308928 - 4308887
Alignment:
Q  585 tgtttggattgacttatttaagtttatctactgatataagca 626  Q
    ||||||||||| ||||||| |||||||||||||| |||||||    
T  4308928 tgtttggattggcttatttgagtttatctactgacataagca 4308887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 585 - 622
Target Start/End: Original strand, 31776191 - 31776228
Alignment:
Q  585 tgtttggattgacttatttaagtttatctactgatata 622  Q
    ||||||||||||||||||| || |||||||||||||||    
T  31776191 tgtttggattgacttatttgagcttatctactgatata 31776228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.0000000003; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 584 - 626
Target Start/End: Complemental strand, 37276896 - 37276854
Alignment:
Q  584 ctgtttggattgacttatttaagtttatctactgatataagca 626  Q
    |||||||||| |||||||||||||||||||||| |||||||||    
T  37276896 ctgtttggatcgacttatttaagtttatctactaatataagca 37276854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 585 - 626
Target Start/End: Original strand, 37419586 - 37419627
Alignment:
Q  585 tgtttggattgacttatttaagtttatctactgatataagca 626  Q
    ||||||||||||||||||| |||||||||||| |||||||||    
T  37419586 tgtttggattgacttatttgagtttatctacttatataagca 37419627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 584 - 626
Target Start/End: Complemental strand, 1830191 - 1830149
Alignment:
Q  584 ctgtttggattgacttatttaagtttatctactgatataagca 626  Q
    |||||||||||||||||||| ||||||| |||||| |||||||    
T  1830191 ctgtttggattgacttatttgagtttatttactgacataagca 1830149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 584 - 630
Target Start/End: Original strand, 15370241 - 15370287
Alignment:
Q  584 ctgtttggattgacttatttaagtttatctactgatataagcatttg 630  Q
    |||||||||||||||||||| || ||||||||||  |||||||||||    
T  15370241 ctgtttggattgacttatttgagcttatctactggcataagcatttg 15370287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 586 - 623
Target Start/End: Original strand, 40059381 - 40059418
Alignment:
Q  586 gtttggattgacttatttaagtttatctactgatataa 623  Q
    |||||||||||||||||| |||||||||||||| ||||    
T  40059381 gtttggattgacttatttgagtttatctactgacataa 40059418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 586 - 623
Target Start/End: Original strand, 40085281 - 40085318
Alignment:
Q  586 gtttggattgacttatttaagtttatctactgatataa 623  Q
    |||||||||||||||||| |||||||||||||| ||||    
T  40085281 gtttggattgacttatttgagtttatctactgacataa 40085318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.000000001; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 583 - 616
Target Start/End: Complemental strand, 28615487 - 28615454
Alignment:
Q  583 tctgtttggattgacttatttaagtttatctact 616  Q
    ||||||||||||||||||||||||||||||||||    
T  28615487 tctgtttggattgacttatttaagtttatctact 28615454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 626
Target Start/End: Complemental strand, 679444 - 679401
Alignment:
Q  583 tctgtttggattgacttatttaagtttatctactgatataagca 626  Q
    |||||||| |||||||||||| ||||||||||||| ||||||||    
T  679444 tctgtttgaattgacttatttgagtttatctactggtataagca 679401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 630
Target Start/End: Complemental strand, 41433528 - 41433481
Alignment:
Q  583 tctgtttggattgacttatttaagtttatctactgatataagcatttg 630  Q
    |||||||| |||||||||||| ||||||||| |||| |||||||||||    
T  41433528 tctgtttgaattgacttatttgagtttatctcctgacataagcatttg 41433481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 585 - 628
Target Start/End: Original strand, 53034718 - 53034761
Alignment:
Q  585 tgtttggattgacttatttaagtttatctactgatataagcatt 628  Q
    ||||||| ||||||||||| || |||||||||||||||||||||    
T  53034718 tgtttggtttgacttatttgagcttatctactgatataagcatt 53034761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 584 - 626
Target Start/End: Original strand, 22662169 - 22662211
Alignment:
Q  584 ctgtttggattgacttatttaagtttatctactgatataagca 626  Q
    |||||||||||||||||||| |||||||||||| | |||||||    
T  22662169 ctgtttggattgacttatttgagtttatctactaacataagca 22662211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 584 - 626
Target Start/End: Original strand, 22666648 - 22666690
Alignment:
Q  584 ctgtttggattgacttatttaagtttatctactgatataagca 626  Q
    |||||||||||||||||||| |||||||||||| | |||||||    
T  22666648 ctgtttggattgacttatttgagtttatctactaacataagca 22666690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 583 - 624
Target Start/End: Original strand, 27043747 - 27043788
Alignment:
Q  583 tctgtttggattgacttatttaagtttatctactgatataag 624  Q
    ||||||||||||||||||||| || ||||||||||| |||||    
T  27043747 tctgtttggattgacttatttgagcttatctactgacataag 27043788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 585 - 618
Target Start/End: Complemental strand, 52428815 - 52428782
Alignment:
Q  585 tgtttggattgacttatttaagtttatctactga 618  Q
    ||||||||||||||||||| ||||||||||||||    
T  52428815 tgtttggattgacttatttgagtttatctactga 52428782  T

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Target: chr3 (Bit Score: 34; Significance: 0.000000001; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 583 - 624
Target Start/End: Original strand, 25447162 - 25447203
Alignment:
Q  583 tctgtttggattgacttatttaagtttatctactgatataag 624  Q
    ||||||||||||||||||||| |||||||||||||| |||||    
T  25447162 tctgtttggattgacttatttgagtttatctactgacataag 25447203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 583 - 624
Target Start/End: Original strand, 36507009 - 36507050
Alignment:
Q  583 tctgtttggattgacttatttaagtttatctactgatataag 624  Q
    ||||||||||||| ||||||| ||||||||||||||||||||    
T  36507009 tctgtttggattggcttatttgagtttatctactgatataag 36507050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 583 - 625
Target Start/End: Original strand, 47903997 - 47904039
Alignment:
Q  583 tctgtttggattgacttatttaagtttatctactgatataagc 625  Q
    ||||||||||||||||||||| ||||||||  |||||||||||    
T  47903997 tctgtttggattgacttatttgagtttatcctctgatataagc 47904039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 587 - 624
Target Start/End: Complemental strand, 26911740 - 26911703
Alignment:
Q  587 tttggattgacttatttaagtttatctactgatataag 624  Q
    ||||||||||||||||| |||||||||||||| |||||    
T  26911740 tttggattgacttatttgagtttatctactgacataag 26911703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 32; Significance: 0.00000002; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 587 - 630
Target Start/End: Original strand, 39551130 - 39551173
Alignment:
Q  587 tttggattgacttatttaagtttatctactgatataagcatttg 630  Q
    ||||||||||||||||| || |||||||| ||||||||||||||    
T  39551130 tttggattgacttatttgagattatctacggatataagcatttg 39551173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 583 - 616
Target Start/End: Complemental strand, 10727497 - 10727464
Alignment:
Q  583 tctgtttggattgacttatttaagtttatctact 616  Q
    ||||||||||||||||||||| ||||||||||||    
T  10727497 tctgtttggattgacttatttgagtttatctact 10727464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 32; Significance: 0.00000002; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 630
Target Start/End: Original strand, 28691753 - 28691800
Alignment:
Q  583 tctgtttggattgacttatttaagtttatctactgatataagcatttg 630  Q
    ||||||||||||||||||||| ||||||||| || | |||||||||||    
T  28691753 tctgtttggattgacttatttgagtttatctgctaacataagcatttg 28691800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 630
Target Start/End: Complemental strand, 41040318 - 41040271
Alignment:
Q  583 tctgtttggattgacttatttaagtttatctactgatataagcatttg 630  Q
    |||||||| ||||| |||||| |||||||||||||||||||| |||||    
T  41040318 tctgtttgaattgatttatttgagtttatctactgatataagtatttg 41040271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 587 - 624
Target Start/End: Complemental strand, 9210970 - 9210933
Alignment:
Q  587 tttggattgacttatttaagtttatctactgatataag 624  Q
    ||||||||||||||||| || |||||||||||||||||    
T  9210970 tttggattgacttatttgagcttatctactgatataag 9210933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 583 - 624
Target Start/End: Original strand, 37064385 - 37064426
Alignment:
Q  583 tctgtttggattgacttatttaagtttatctactgatataag 624  Q
    ||||||||||||||||||||| |  |||||||||||||||||    
T  37064385 tctgtttggattgacttatttgatcttatctactgatataag 37064426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 32; Significance: 0.00000002; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 587 - 634
Target Start/End: Complemental strand, 18286940 - 18286893
Alignment:
Q  587 tttggattgacttatttaagtttatctactgatataagcatttgcgag 634  Q
    |||||||||| |||||  |||||||||||| |||||||||||||||||    
T  18286940 tttggattgaattattcgagtttatctactaatataagcatttgcgag 18286893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 584 - 626
Target Start/End: Original strand, 3280654 - 3280696
Alignment:
Q  584 ctgtttggattgacttatttaagtttatctactgatataagca 626  Q
    ||||||||||||||||||||||  |||||||||||| ||||||    
T  3280654 ctgtttggattgacttatttaaacttatctactgatttaagca 3280696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 583 - 624
Target Start/End: Complemental strand, 32197886 - 32197845
Alignment:
Q  583 tctgtttggattgacttatttaagtttatctactgatataag 624  Q
    ||||||||||||||||| ||| |||||||||||||| |||||    
T  32197886 tctgtttggattgacttttttgagtttatctactgacataag 32197845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 32; Significance: 0.00000002; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 591 - 630
Target Start/End: Complemental strand, 4200379 - 4200340
Alignment:
Q  591 gattgacttatttaagtttatctactgatataagcatttg 630  Q
    ||||||||||||| ||||||| ||||||||||||||||||    
T  4200379 gattgacttattttagtttatatactgatataagcatttg 4200340  T

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Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 584 - 634
Target Start/End: Original strand, 37241739 - 37241788
Alignment:
Q  584 ctgtttggattgacttatttaagtttatctactgatataagcatttgcgag 634  Q
    ||||||||||||||||||||||| ||||||||||  ||||||| |||||||    
T  37241739 ctgtttggattgacttatttaagcttatctactg-cataagcacttgcgag 37241788  T

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Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 585 - 626
Target Start/End: Complemental strand, 6292643 - 6292602
Alignment:
Q  585 tgtttggattgacttatttaagtttatctactgatataagca 626  Q
    ||||||||||||||||||| || ||||||||||| |||||||    
T  6292643 tgtttggattgacttatttgagcttatctactgacataagca 6292602  T

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Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 583 - 616
Target Start/End: Original strand, 30013996 - 30014029
Alignment:
Q  583 tctgtttggattgacttatttaagtttatctact 616  Q
    ||||||||||||||||||||| ||||||||||||    
T  30013996 tctgtttggattgacttatttgagtttatctact 30014029  T

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