View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8127_low_21 (Length: 275)

Name: NF8127_low_21
Description: NF8127
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8127_low_21
NF8127_low_21
[»] chr1 (10 HSPs)
chr1 (1-259)||(30970990-30971248)
chr1 (37-182)||(37530141-37530286)
chr1 (37-182)||(32353715-32353860)
chr1 (43-182)||(48073856-48073995)
chr1 (66-152)||(14119371-14119458)
chr1 (93-176)||(37139600-37139683)
chr1 (61-166)||(20795261-20795366)
chr1 (37-182)||(38231264-38231409)
chr1 (69-166)||(44929829-44929926)
chr1 (61-133)||(49265406-49265478)
[»] chr2 (14 HSPs)
chr2 (31-259)||(31774184-31774412)
chr2 (36-256)||(38233127-38233343)
chr2 (66-179)||(22052207-22052320)
chr2 (37-182)||(26681458-26681603)
chr2 (37-182)||(31594131-31594276)
chr2 (37-182)||(33547449-33547594)
chr2 (61-177)||(26490695-26490811)
chr2 (54-176)||(36803495-36803617)
chr2 (63-179)||(9949708-9949824)
chr2 (93-145)||(37139316-37139368)
chr2 (61-154)||(11234906-11234999)
chr2 (61-145)||(3119581-3119665)
chr2 (61-145)||(32244044-32244128)
chr2 (37-182)||(43627075-43627221)
[»] chr3 (9 HSPs)
chr3 (79-259)||(48974303-48974482)
chr3 (125-259)||(48893888-48894021)
chr3 (37-182)||(25873530-25873675)
chr3 (63-145)||(14868229-14868311)
chr3 (37-182)||(2813918-2814063)
chr3 (37-182)||(23601350-23601495)
chr3 (61-145)||(20198537-20198621)
chr3 (61-145)||(10867314-10867398)
chr3 (63-154)||(27497367-27497458)
[»] chr8 (11 HSPs)
chr8 (82-259)||(22358391-22358567)
chr8 (36-256)||(31216908-31217125)
chr8 (63-145)||(11394790-11394872)
chr8 (61-176)||(43254168-43254283)
chr8 (73-182)||(39483194-39483303)
chr8 (66-109)||(412812-412855)
chr8 (96-155)||(30261292-30261351)
chr8 (66-182)||(16421456-16421572)
chr8 (79-154)||(12218477-12218552)
chr8 (69-142)||(35405361-35405434)
chr8 (84-177)||(43613529-43613622)
[»] chr5 (11 HSPs)
chr5 (66-145)||(15500093-15500172)
chr5 (37-182)||(6264616-6264761)
chr5 (31-182)||(34858105-34858256)
chr5 (63-177)||(34480538-34480652)
chr5 (63-145)||(8571544-8571626)
chr5 (81-165)||(6020332-6020416)
chr5 (63-134)||(17737781-17737852)
chr5 (63-145)||(19513909-19513991)
chr5 (82-133)||(31862219-31862270)
chr5 (63-145)||(4399491-4399573)
chr5 (93-145)||(3199601-3199653)
[»] chr6 (3 HSPs)
chr6 (37-182)||(8873244-8873389)
chr6 (66-182)||(23347913-23348029)
chr6 (81-176)||(4406595-4406690)
[»] chr7 (11 HSPs)
chr7 (81-180)||(968063-968162)
chr7 (37-109)||(3104553-3104625)
chr7 (66-145)||(3632417-3632496)
chr7 (61-176)||(31025941-31026056)
chr7 (63-145)||(19728101-19728183)
chr7 (43-182)||(13439630-13439769)
chr7 (37-182)||(28326933-28327078)
chr7 (73-109)||(12379179-12379215)
chr7 (69-111)||(30385848-30385890)
chr7 (61-166)||(42565422-42565527)
chr7 (61-133)||(13554620-13554692)
[»] chr4 (9 HSPs)
chr4 (37-182)||(55298200-55298345)
chr4 (37-152)||(33313006-33313121)
chr4 (48-182)||(23873905-23874039)
chr4 (87-177)||(42169487-42169577)
chr4 (60-145)||(9993279-9993364)
chr4 (66-182)||(12776654-12776770)
chr4 (63-133)||(42953937-42954007)
chr4 (97-166)||(10426351-10426420)
chr4 (61-154)||(37615174-37615267)
[»] scaffold0287 (1 HSPs)
scaffold0287 (66-145)||(13589-13668)
[»] scaffold0029 (1 HSPs)
scaffold0029 (31-179)||(135048-135196)
[»] scaffold0002 (2 HSPs)
scaffold0002 (31-179)||(312875-313023)
scaffold0002 (31-179)||(328329-328477)


Alignment Details
Target: chr1 (Bit Score: 223; Significance: 1e-123; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 30970990 - 30971248
Alignment:
Q  1 ttgtggggcatgatcgcaataatcaattggttaacaatgttattactcccattccctgtctgcttgataagattaagttattgtctttaggttggctgaa 100  Q
    ||||| ||||||| ||||||| || |||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  30970990 ttgtgtggcatgagcgcaatagtcgattgtttaacaatgtttttactcccattccctgtctgctttataagattaagttattgtctttaggttggctgca 30971089  T
Q  101 agctaaaaatgtcatttttacttttggaactcagcagtggtggtctagccctttaacttgcttgggtataggctaatgttttgatttgctgggttactta 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  30971090 agctaaaaatgtcatttttacttttggaactcagcagtggtggtctagccctttaacttgcttgggtataggctaatgttttgatttgctgggttacttg 30971189  T
Q  201 tgttttatgttctctttgtatacttttggtaatctctaaggcacatcttgtgctttatt 259  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30971190 tgttttatgttctctttgtatacttttggtaatctctaaggcacatcttgtgctttatt 30971248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 182
Target Start/End: Complemental strand, 37530286 - 37530141
Alignment:
Q  37 atgttattactcccattccctgtctgcttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagca 136  Q
    ||||| |||| ||||| || ||| | ||||||||| |||||||  |||||||||||||||||||||||||||| |  |  |||  |||||||||||||||    
T  37530286 atgttgttacccccatcccttgtttacttgataaggttaagttgatgtctttaggttggctgaaagctaaaaaagctacctttgtttttggaactcagca 37530187  T
Q  137 gtggtggtctagccctttaacttgcttgggtataggctaatgtttt 182  Q
    ||||||||| |||||| |   ||| |||| ||| ||||||||||||    
T  37530186 gtggtggtcaagccctcttgtttgtttggatattggctaatgtttt 37530141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 37 - 182
Target Start/End: Original strand, 32353715 - 32353860
Alignment:
Q  37 atgttattactcccattccctgtctgcttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagca 136  Q
    ||||| |||| ||||| || ||| | ||||||||||||||| | |||||| |||||||| ||||||||||||| |  |  |||  |||||| ||||||||    
T  32353715 atgttgttacccccatcccttgtttacttgataagattaagctgttgtctctaggttggttgaaagctaaaaaagctacctttgtttttgggactcagca 32353814  T
Q  137 gtggtggtctagccctttaacttgcttgggtataggctaatgtttt 182  Q
    ||||||||| |||||| |   ||| |||||||| ||||||||||||    
T  32353815 gtggtggtcaagccctcttgtttgtttgggtattggctaatgtttt 32353860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 182
Target Start/End: Original strand, 48073856 - 48073995
Alignment:
Q  43 ttactcccattccctgtctgcttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtg 142  Q
    |||| ||||| |||||| | ||||||||| ||||| | |||||| |||||||| ||||||||||||| |  |  |||  |||||| ||||||||||||||    
T  48073856 ttacccccatcccctgtttacttgataaggttaagctgttgtctctaggttggttgaaagctaaaaaagctacctttgtttttgggactcagcagtggtg 48073955  T
Q  143 gtctagccctttaacttgcttgggtataggctaatgtttt 182  Q
    ||| |||||| |   ||| |||||||| |||||| |||||    
T  48073956 gtcaagccctcttgtttgtttgggtattggctaaggtttt 48073995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 152
Target Start/End: Complemental strand, 14119458 - 14119371
Alignment:
Q  66 gataagattaagttattgtcttt-aggttggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtctagccct 152  Q
    |||||||||||| | |||||||| ||||||||||||||||||||| || |  |||  ||| | |||||||||||||||||| ||||||    
T  14119458 gataagattaagatgttgtcttttaggttggctgaaagctaaaaaagttacctttgttttcgaaactcagcagtggtggtcaagccct 14119371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 176
Target Start/End: Original strand, 37139600 - 37139683
Alignment:
Q  93 tggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtctagccctttaacttgcttgggtataggctaa 176  Q
    ||||||||||| |||||||| || |||   ||||| || |||  ||||||||| |||||||||||||| |||||||| ||||||    
T  37139600 tggctgaaagccaaaaatgttatgtttgtgtttggcacgcagaggtggtggtcaagccctttaacttgtttgggtattggctaa 37139683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 61 - 166
Target Start/End: Complemental strand, 20795366 - 20795261
Alignment:
Q  61 tgcttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtctagccctttaacttg 160  Q
    |||||||||| |||||||| || || ||||  ||||| |||||||||||||||| ||||  |||||||| |||   |||||||||  | |||||| ||||    
T  20795366 tgcttgataaaattaagttgttatcgttagtgtggcttaaagctaaaaatgtcacttttgtttttggaagtcatatgtggtggtcatgtcctttagcttg 20795267  T
Q  161 cttggg 166  Q
     |||||    
T  20795266 tttggg 20795261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 182
Target Start/End: Complemental strand, 38231409 - 38231264
Alignment:
Q  37 atgttattactcccattccctgtctgcttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagca 136  Q
    ||||| |||| ||||| || ||| | || |||||||||||| | |||||| |||||||| ||||||||||||| |  |  ||   |||||| ||||| ||    
T  38231409 atgttgttacccccatcccttgtttactagataagattaagctgttgtctctaggttggttgaaagctaaaaaagctaccttcgtttttgggactcatca 38231310  T
Q  137 gtggtggtctagccctttaacttgcttgggtataggctaatgtttt 182  Q
    |||||||||  ||||| |   ||| |||||||| ||||||||||||    
T  38231309 gtggtggtcacgccctcttgtttgtttgggtattggctaatgtttt 38231264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 44929926 - 44929829
Alignment:
Q  69 aagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtctagccctttaacttgcttggg 166  Q
    ||||||||||  || |||||||  ||||||||||||| ||| ||||| |||  |||||| ||||||  ||||||||| || |||||  ||||||||||    
T  44929926 aagattaagtcgttatctttagtgtggctgaaagctataaaagtcatgtttgtttttggtactcagatgtggtggtcaagtcctttggcttgcttggg 44929829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 133
Target Start/End: Original strand, 49265406 - 49265478
Alignment:
Q  61 tgcttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactca 133  Q
    |||||||||| |||||||| || || ||||  ||||| ||||||||||||| || ||||  ||||||||||||    
T  49265406 tgcttgataaaattaagttgttatcattagtgtggcttaaagctaaaaatgccacttttgtttttggaactca 49265478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 138; Significance: 3e-72; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 31 - 259
Target Start/End: Complemental strand, 31774412 - 31774184
Alignment:
Q  31 ttaacaatgttattactcccattccctgtctgcttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaac 130  Q
    |||| |||||||||||||||||||||||| ||||||||||| ||||| | ||||||||||| | ||||||||||||||||| ||||||||||| ||||||    
T  31774412 ttaaaaatgttattactcccattccctgtttgcttgataaggttaagatgttgtctttaggattgctgaaagctaaaaatgccatttttacttatggaac 31774313  T
Q  131 tcagcagtggtggtctagccctttaacttgcttgggtataggctaatgttttgatttgctgggttacttatgttttatg-ttctctttgtatacttttgg 229  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||| ||| |||| | || ||||||||||||||||||||    
T  31774312 tcagcagtggtggtctagccctttaacttgcttgggtataggctaatg-tttcttttgctgggttccttgtgttatttgtttctctttgtatacttttgg 31774214  T
Q  230 taatctctaaggcacatcttgtgctttatt 259  Q
    || |  ||||||||||| ||||||||||||    
T  31774213 tagtagctaaggcacattttgtgctttatt 31774184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 36 - 256
Target Start/End: Original strand, 38233127 - 38233343
Alignment:
Q  36 aatgttattactcccattccctgtctgcttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagc 135  Q
    |||||||||||| ||||||||||| ||||||||||| ||||| |||||||||| || |||||||||| |||||||| |||||||| || |||||||||||    
T  38233127 aatgttattacttccattccctgtttgcttgataaggttaagatattgtctttgggatggctgaaagttaaaaatgccatttttatttatggaactcagc 38233226  T
Q  136 agtggtggtctagccctttaacttgcttgggtataggctaatgttttgatttgctgggttacttatgttttatg-ttctctttgtatacttttggtaatc 234  Q
    ||||||| ||||||||||||| ||| ||||||||||||||||| |||| |||||||| |  |  ||||| | || |||||||||||||    ||||| ||    
T  38233227 agtggtgctctagccctttaatttgtttgggtataggctaatg-tttgttttgctggatgcccgatgttctctgtttctctttgtata----tggtagtc 38233321  T
Q  235 tctaaggcacatcttgtgcttt 256  Q
    ||||||||||||||||||||||    
T  38233322 tctaaggcacatcttgtgcttt 38233343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 66 - 179
Target Start/End: Complemental strand, 22052320 - 22052207
Alignment:
Q  66 gataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtctagccctttaacttgcttgg 165  Q
    |||||||||||||| ||||||||||||||||| ||||||||||| |  | ||||  |||||||||||||||||||||||| |||||| |   ||| ||||    
T  22052320 gataagattaagttgttgtctttaggttggcttaaagctaaaaaagctacttttgtttttggaactcagcagtggtggtcaagccctcttgtttgtttgg 22052221  T
Q  166 gtataggctaatgt 179  Q
    |||| |||||||||    
T  22052220 gtattggctaatgt 22052207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 182
Target Start/End: Complemental strand, 26681603 - 26681458
Alignment:
Q  37 atgttattactcccattccctgtctgcttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagca 136  Q
    ||||| |||| ||||| || ||| | ||||||||| ||||||| ||||||||||||||||||||||||||||| |  |  |||  |||||||||||| ||    
T  26681603 atgttgttacccccatcccttgtttacttgataaggttaagttgttgtctttaggttggctgaaagctaaaaaagctacctttgtttttggaactcaaca 26681504  T
Q  137 gtggtggtctagccctttaacttgcttgggtataggctaatgtttt 182  Q
    ||||||||| | |||| |   ||| |||||||| ||||||||||||    
T  26681503 gtggtggtcaaaccctcttgtttgtttgggtattggctaatgtttt 26681458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 182
Target Start/End: Complemental strand, 31594276 - 31594131
Alignment:
Q  37 atgttattactcccattccctgtctgcttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagca 136  Q
    ||||| |||| ||||| || ||| | ||||||||| |||| ||  |||||||||||||||||||||||||||| |  |  |||  |||||||||||||||    
T  31594276 atgttgttacccccatcccttgtttacttgataaggttaaattgatgtctttaggttggctgaaagctaaaaaagctacctttgtttttggaactcagca 31594177  T
Q  137 gtggtggtctagccctttaacttgcttgggtataggctaatgtttt 182  Q
    ||||||||| |||||| |   ||| |||||||| ||||||||||||    
T  31594176 gtggtggtcaagccctcttgtttgtttgggtattggctaatgtttt 31594131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 182
Target Start/End: Complemental strand, 33547594 - 33547449
Alignment:
Q  37 atgttattactcccattccctgtctgcttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagca 136  Q
    ||||| |||| ||||| |||||| | ||||||||| ||||| | |||||| |||||||| ||||||||||||| |  |  |||  |||||| ||||||||    
T  33547594 atgttgttacccccatcccctgtttacttgataaggttaagctgttgtctctaggttggttgaaagctaaaaaagctacctttgtttttgggactcagca 33547495  T
Q  137 gtggtggtctagccctttaacttgcttgggtataggctaatgtttt 182  Q
    ||||||||| |||||| |   ||| |||||||| |||||| |||||    
T  33547494 gtggtggtcaagccctcttgtttgtttgggtattggctaaggtttt 33547449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 177
Target Start/End: Original strand, 26490695 - 26490811
Alignment:
Q  61 tgcttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtctagccctttaacttg 160  Q
    |||||||||||||||| || || ||||| |  ||||||||||||||||| ||||| |||   ||||| |||||| |||||| ||| ||||||||  ||||    
T  26490695 tgcttgataagattaaattgttatctttggcatggctgaaagctaaaaaagtcatgtttgtatttggtactcagaagtggtagtcaagccctttggcttg 26490794  T
Q  161 cttgggtataggctaat 177  Q
     |||||||| |||||||    
T  26490795 tttgggtattggctaat 26490811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 176
Target Start/End: Complemental strand, 36803617 - 36803495
Alignment:
Q  54 ccctgtctgcttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtctagccctt 153  Q
    ||||||||| | |||||  |||| || || || ||||||||||||||||| ||||||||||| |||  |||||| || |||  ||||||||| ||| |||    
T  36803617 ccctgtctgttagataaagttaaattgttatcattaggttggctgaaagcaaaaaatgtcatgtttgtttttggcacgcagaggtggtggtcaagctctt 36803518  T
Q  154 taacttgcttgggtataggctaa 176  Q
    ||||||| |||| ||| ||||||    
T  36803517 taacttgtttggatattggctaa 36803495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 63 - 179
Target Start/End: Original strand, 9949708 - 9949824
Alignment:
Q  63 cttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtctagccctttaacttgct 162  Q
    ||||||||| |||||||  |||||||||||||||| ||||||||||| |  |  |||  |||||  ||||||||||||||||| |||||| |   ||| |    
T  9949708 cttgataaggttaagttgatgtctttaggttggctaaaagctaaaaaagctacctttgtttttgacactcagcagtggtggtcaagccctcttgtttgtt 9949807  T
Q  163 tgggtataggctaatgt 179  Q
    ||||||| |||||||||    
T  9949808 tgggtattggctaatgt 9949824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 145
Target Start/End: Complemental strand, 37139368 - 37139316
Alignment:
Q  93 tggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtc 145  Q
    |||||||||||||||||||||||||||  |||||||||||||  |||||||||    
T  37139368 tggctgaaagctaaaaatgtcatttttgtttttggaactcagatgtggtggtc 37139316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 154
Target Start/End: Original strand, 11234906 - 11234999
Alignment:
Q  61 tgcttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtctagcccttt 154  Q
    |||||||||| |||||||| || || ||||  |||||||||||||||||| | | ||||  |||||||||||||  ||||||||| || |||||    
T  11234906 tgcttgataaaattaagttgttatcgttagtgtggctgaaagctaaaaatataacttttgtttttggaactcagatgtggtggtcaagtccttt 11234999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 145
Target Start/End: Complemental strand, 3119665 - 3119581
Alignment:
Q  61 tgcttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtc 145  Q
    |||||||||| |||||||| || || ||||  |||| |||||||||||||| || ||||  |||||||||||||  |||||||||    
T  3119665 tgcttgataaaattaagttgttatcgttagtgtggcggaaagctaaaaatgccacttttgtttttggaactcagatgtggtggtc 3119581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 145
Target Start/End: Original strand, 32244044 - 32244128
Alignment:
Q  61 tgcttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtc 145  Q
    |||||||||| |||||||| || || ||||  ||||||||||||||||||| || ||||  ||||| |||||||  |||||||||    
T  32244044 tgcttgataaaattaagttgttatcgttagcgtggctgaaagctaaaaatgccacttttgtttttgaaactcagatgtggtggtc 32244128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 182
Target Start/End: Complemental strand, 43627221 - 43627075
Alignment:
Q  37 atgttattactcccattccctgtctgcttgataagattaagttattgtctttaggttggctgaaagcta-aaaatgtcatttttacttttggaactcagc 135  Q
    ||||| |||| ||||| || ||| | || |||||||||||| | |||||| |||||||| ||||||||| |||| |  |  |||  |||||| |||||||    
T  43627221 atgttgttacccccatcccttgtttactagataagattaagctgttgtctctaggttggttgaaagctaaaaaaagctacatttgtttttgggactcagc 43627122  T
Q  136 agtggtggtctagccctttaacttgcttgggtataggctaatgtttt 182  Q
    |||||||||| | |||| |   ||| |||||||| ||||||||||||    
T  43627121 agtggtggtcaaaccctcttgtttgtttgggtattggctaatgtttt 43627075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 137; Significance: 1e-71; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 79 - 259
Target Start/End: Complemental strand, 48974482 - 48974303
Alignment:
Q  79 tattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtctagccctttaacttgcttgggtataggctaatg 178  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  48974482 tattgtctttaggttggctgaaaactaaaaatgccatttttacttttggaactcagcagtggtggtctagtccgttaacttgcttgggtataggctaatg 48974383  T
Q  179 ttttgatttgctgggttacttatgttttatgttctctttgtatacttttggtaatctctaaggcacatcttgtgctttatt 259  Q
     |||| ||||||||||||||| |||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  48974382 -tttgctttgctgggttacttgtgttttctgttctctttgtacacttttgataatctctaaggcacatcttgtgctttatt 48974303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 125 - 259
Target Start/End: Complemental strand, 48894021 - 48893888
Alignment:
Q  125 tggaactcagcagtggtggtctagccctttaacttgcttgggtataggctaatgttttgatttgctgggttacttatgttttatgttctctttgtatact 224  Q
    |||||||||| |||| |||||||| ||||||||||| |||||||||||||||||||| | ||||||||||| ||| | || | |||||||||||||||||    
T  48894021 tggaactcagtagtgatggtctagtcctttaacttgtttgggtataggctaatgttt-gttttgctgggttccttgtattatctgttctctttgtatact 48893923  T
Q  225 tttggtaatctctaaggcacatcttgtgctttatt 259  Q
    ||||||| |||||||| |||||||| |||||||||    
T  48893922 tttggtagtctctaagtcacatcttttgctttatt 48893888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 37 - 182
Target Start/End: Original strand, 25873530 - 25873675
Alignment:
Q  37 atgttattactcccattccctgtctgcttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagca 136  Q
    ||||| |||| ||||| || ||| | ||||||||| |||||||  |||||||||||||||||||||||||||| |  || |||  |||||||||||||||    
T  25873530 atgttgttacccccatcccgtgtttacttgataaggttaagttgatgtctttaggttggctgaaagctaaaaaagctatctttgtttttggaactcagca 25873629  T
Q  137 gtggtggtctagccctttaacttgcttgggtataggctaatgtttt 182  Q
    ||||||||| | |||| |   ||| |||||||| ||||||||||||    
T  25873630 gtggtggtcaaaccctcttgtttgtttgggtattggctaatgtttt 25873675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 63 - 145
Target Start/End: Original strand, 14868229 - 14868311
Alignment:
Q  63 cttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtc 145  Q
    |||||||| |||| ||| || ||||||| |||||||||||||||||||| || ||||  |||||||||||||  |||||||||    
T  14868229 cttgataaaattatgttgttatctttagcttggctgaaagctaaaaatgccacttttgtttttggaactcagatgtggtggtc 14868311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 182
Target Start/End: Original strand, 2813918 - 2814063
Alignment:
Q  37 atgttattactcccattccctgtctgcttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagca 136  Q
    ||||| |||| ||||| || ||| | || |||||||||||||| |||||| |||||||| ||||||||||||| |  |  |||  |||||| ||||||||    
T  2813918 atgttgttacccccatcccttgtttactagataagattaagttgttgtctctaggttggttgaaagctaaaaaagctacctttgtttttgggactcagca 2814017  T
Q  137 gtggtggtctagccctttaacttgcttgggtataggctaatgtttt 182  Q
     ||||||||  ||||| |   ||| |||||||| ||||||||||||    
T  2814018 atggtggtcatgccctcttgtttgtttgggtattggctaatgtttt 2814063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 182
Target Start/End: Complemental strand, 23601495 - 23601350
Alignment:
Q  37 atgttattactcccattccctgtctgcttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagca 136  Q
    ||||| |||| ||||| || ||| | || |||||||||||| |  ||||| |||||||| ||||||||||||| |  || |||  |||||| ||||| ||    
T  23601495 atgttgttacccccatcccttgtttactagataagattaagctgctgtctctaggttggttgaaagctaaaaaagctatctttgtttttgggactcaaca 23601396  T
Q  137 gtggtggtctagccctttaacttgcttgggtataggctaatgtttt 182  Q
    ||||||||| |||||| |   ||| |||||||| ||||||||||||    
T  23601395 gtggtggtcaagccctcttgtttgtttgggtattggctaatgtttt 23601350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 145
Target Start/End: Original strand, 20198537 - 20198621
Alignment:
Q  61 tgcttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtc 145  Q
    |||||||||| |||||||| || || ||||  |||||||||||||||||| ||| ||||  |||||||||||||  |||||||||    
T  20198537 tgcttgataaaattaagttgttatcgttagtgtggctgaaagctaaaaatatcacttttgtttttggaactcagatgtggtggtc 20198621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 145
Target Start/End: Complemental strand, 10867398 - 10867314
Alignment:
Q  61 tgcttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtc 145  Q
    |||||||||| |||||||| || || ||||  ||||||||||||||||||  || ||||  |||||||||||||  |||||||||    
T  10867398 tgcttgataaaattaagttgttatcgttagcgtggctgaaagctaaaaataccacttttgtttttggaactcagatgtggtggtc 10867314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 154
Target Start/End: Complemental strand, 27497458 - 27497367
Alignment:
Q  63 cttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtctagcccttt 154  Q
    |||||||| |||||||| || || ||||  ||||||||||||||||||| || ||||  |||||||| ||||  ||||||||| || |||||    
T  27497458 cttgataaaattaagttgttatcgttagtgtggctgaaagctaaaaatgccacttttgtttttggaattcagatgtggtggtcaagtccttt 27497367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 118; Significance: 3e-60; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 82 - 259
Target Start/End: Complemental strand, 22358567 - 22358391
Alignment:
Q  82 tgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtctagccctttaacttgcttgggtataggctaatgttt 181  Q
    |||||||||| ||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  22358567 tgtctttaggatggctgaaagctaaacatgccatttttacttatggaactcagcagtggtggtctagccctttaacttgcttgggtataggctaatg-tt 22358469  T
Q  182 tgatttgctgggttacttatgttttatgttctctttgtatacttttggtaatctctaaggcacatcttgtgctttatt 259  Q
    || | ||||||||| ||| |||| | |||| ||||||||||||||||||| ||||||||| |||||||||||||||||    
T  22358468 tgttatgctgggttccttgtgttatctgttttctttgtatacttttggtagtctctaaggtacatcttgtgctttatt 22358391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 36 - 256
Target Start/End: Original strand, 31216908 - 31217125
Alignment:
Q  36 aatgttattactcccattccctgtctgcttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagc 135  Q
    ||||| |||| ||||||| ||||| ||||||| ||| | ||| | ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  31216908 aatgtaattattcccatttcctgtttgcttgaaaaggtcaagatgttgtctttaggttggctaaaagctaaaaatgtcatttttacttatggaactcagc 31217007  T
Q  136 agtggtggtctagccctttaacttgcttgggtataggctaatgttttgatttgctgggttacttatgttttatgttctctttgtatacttttggtaatct 235  Q
    | ||||||||||||||||||||||| ||||| |||||||||||  ||| | || ||| ||  || || ||| |||| ||||||| ||||||||||| |||    
T  31217008 aatggtggtctagccctttaacttgtttgggcataggctaatg--ttgttatgttggattctttgtg-tttctgttatctttgtgtacttttggtagtct 31217104  T
Q  236 ctaaggcacatcttgtgcttt 256  Q
    |||||||||| ||||||||||    
T  31217105 ctaaggcacaccttgtgcttt 31217125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 63 - 145
Target Start/End: Original strand, 11394790 - 11394872
Alignment:
Q  63 cttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtc 145  Q
    |||||||| |||||||| || |||||||  |||||||||||||||||| ||| ||||| |||||||||||||  |||||||||    
T  11394790 cttgataaaattaagttgttatctttagtgtggctgaaagctaaaaatatcacttttatttttggaactcagatgtggtggtc 11394872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 176
Target Start/End: Original strand, 43254168 - 43254283
Alignment:
Q  61 tgcttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtctagccctttaacttg 160  Q
    |||||||||| ||||| || || || ||||  ||||||||||||||||||| || ||||  |||||||||||||  ||||||||| || ||||| |||||    
T  43254168 tgcttgataaaattaaattgttatcgttagtgtggctgaaagctaaaaatgccacttttgtttttggaactcagatgtggtggtcaagtcctttgacttg 43254267  T
Q  161 cttgggtataggctaa 176  Q
     ||||| || ||||||    
T  43254268 tttgggcattggctaa 43254283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 182
Target Start/End: Original strand, 39483194 - 39483303
Alignment:
Q  73 ttaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtctagccctttaacttgcttgggtatagg 172  Q
    |||||||  ||||| |||| ||||||||||||||||| |||| ||||| |||||| ||||||   |||||||| ||||||||| | || ||||| ||||     
T  39483194 ttaagttgatgtctctagggtggctgaaagctaaaaaagtcacttttatttttggtactcagacttggtggtcgagccctttagcatgtttgggcataga 39483293  T
Q  173 ctaatgtttt 182  Q
    || |||||||    
T  39483294 cttatgtttt 39483303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 412812 - 412855
Alignment:
Q  66 gataagattaagttattgtctttaggttggctgaaagctaaaaa 109  Q
    ||||||||||||||  ||||||||||||||||||||||||||||    
T  412812 gataagattaagttgctgtctttaggttggctgaaagctaaaaa 412855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 155
Target Start/End: Complemental strand, 30261351 - 30261292
Alignment:
Q  96 ctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtctagcccttta 155  Q
    |||||||||||||||||||| |||  |||||| |||||| |||||||||| |||||||||    
T  30261351 ctgaaagctaaaaatgtcatatttgtttttggtactcagtagtggtggtcaagcccttta 30261292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 16421456 - 16421572
Alignment:
Q  66 gataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtctagccctttaacttgcttgg 165  Q
    |||||||||||| |  | ||| |||||||| ||||||||||||| |  |  |||  |||||||||||||||||||||||| |||||| |   ||| ||||    
T  16421456 gataagattaagctgctatctctaggttggttgaaagctaaaaaagctacctttgtttttggaactcagcagtggtggtcaagccctcttgtttgtttgg 16421555  T
Q  166 gtataggctaatgtttt 182  Q
    |||| ||||||| ||||    
T  16421556 gtattggctaatatttt 16421572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 79 - 154
Target Start/End: Original strand, 12218477 - 12218552
Alignment:
Q  79 tattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtctagcccttt 154  Q
    ||||||| ||||||||| ||||||||| ||| |  || |||| |||||| |||||||||||||||||  |||||||    
T  12218477 tattgtccttaggttggttgaaagctagaaaagctatctttatttttggtactcagcagtggtggtcatgcccttt 12218552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 35405434 - 35405361
Alignment:
Q  69 aagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtg 142  Q
    |||||||||  |||||||||||||||||| ||||||||||| |  |  |||  |||||||| ||||||||||||    
T  35405434 aagattaagacattgtctttaggttggctaaaagctaaaaaagctacctttgtttttggaattcagcagtggtg 35405361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 177
Target Start/End: Original strand, 43613529 - 43613622
Alignment:
Q  84 tctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtctagccctttaacttgcttgggtataggctaat 177  Q
    |||| ||| |||||||| |||||||||| ||| ||||  | ||| || |||  ||||||||||||||||||| ||||  |||| ||||||||||    
T  43613529 tcttcagggtggctgaaggctaaaaatgccatgtttatgtatggcacccagatgtggtggtctagccctttagcttgtctgggcataggctaat 43613622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 7e-21; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 66 - 145
Target Start/End: Original strand, 15500093 - 15500172
Alignment:
Q  66 gataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtc 145  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |  | ||||  ||||||||||||||||||||||||    
T  15500093 gataagattaagttattgtctttaggttggcttaaagctaaaaaagctacttttgtttttggaactcagcagtggtggtc 15500172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 182
Target Start/End: Original strand, 6264616 - 6264761
Alignment:
Q  37 atgttattactcccattccctgtctgcttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagca 136  Q
    ||||| |||| ||||| || ||| | ||| ||||| ||||||| ||||||||||||||| ||||||||||||| |  | ||||  |||||||||||||||    
T  6264616 atgttgttacccccatcccttgtttactttataaggttaagttgttgtctttaggttggttgaaagctaaaaaagctacttttgtttttggaactcagca 6264715  T
Q  137 gtggtggtctagccctttaacttgcttgggtataggctaatgtttt 182  Q
    ||||||||| | |||| |   ||| |||||||| ||||||||||||    
T  6264716 gtggtggtcaaaccctcttgtttgtttgggtattggctaatgtttt 6264761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 182
Target Start/End: Original strand, 34858105 - 34858256
Alignment:
Q  31 ttaacaatgttattactcccattccctgtctgcttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaac 130  Q
    ||||| ||||| |||| || || |||||| | ||||||||||||||| | |||||| |||||||| ||||||||||||| |  |  |||  |||||| ||    
T  34858105 ttaaccatgttgttacccctatcccctgtttacttgataagattaagctgttgtctctaggttggttgaaagctaaaaaagctacctttgtttttgggac 34858204  T
Q  131 tcagcagtggtggtctagccctttaacttgcttgggtataggctaatgtttt 182  Q
    ||||||||||||||| |||||| |   ||| |||||||| |||||| |||||    
T  34858205 tcagcagtggtggtcaagccctcttgtttgtttgggtattggctaaggtttt 34858256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 63 - 177
Target Start/End: Complemental strand, 34480652 - 34480538
Alignment:
Q  63 cttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtctagccctttaacttgct 162  Q
    ||||||||| |||||||  |||||||||||||||||||||||||||| |  |  |||  |||||| ||||||||||||||||| |||||| |   ||| |    
T  34480652 cttgataaggttaagttgatgtctttaggttggctgaaagctaaaaaagctacctttgtttttggcactcagcagtggtggtcaagccctcttgtttgtt 34480553  T
Q  163 tgggtataggctaat 177  Q
    ||||||| |||||||    
T  34480552 tgggtattggctaat 34480538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 63 - 145
Target Start/End: Complemental strand, 8571626 - 8571544
Alignment:
Q  63 cttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtc 145  Q
    |||||||| |||||||| || |||||||  ||||||||||||||||||| || ||||  |||||||||||||  |||||||||    
T  8571626 cttgataaaattaagttgttatctttagcgtggctgaaagctaaaaatgccacttttgtttttggaactcagatgtggtggtc 8571544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 165
Target Start/End: Complemental strand, 6020416 - 6020332
Alignment:
Q  81 ttgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtctagccctttaacttgcttgg 165  Q
    |||||||||||||||||||||||||||||    | |||||||||||||||| |  | |||||||| ||||||||| |||| ||||    
T  6020416 ttgtctttaggttggctgaaagctaaaaaatctacttttacttttggaacttaagaatggtggtcgagccctttagcttgtttgg 6020332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 134
Target Start/End: Complemental strand, 17737852 - 17737781
Alignment:
Q  63 cttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcag 134  Q
    |||||||| |||||||| || |||||||  ||||||||||||||||||| || ||||  |||||||||||||    
T  17737852 cttgataaaattaagttgttatctttagcgtggctgaaagctaaaaatgccacttttgtttttggaactcag 17737781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 145
Target Start/End: Original strand, 19513909 - 19513991
Alignment:
Q  63 cttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtc 145  Q
    |||||||| |||||||| || |||||||  |||||||| |||||||||| || ||||  |||||||||||||  |||||||||    
T  19513909 cttgataaaattaagttgttatctttagcgtggctgaaggctaaaaatgccacttttgtttttggaactcagatgtggtggtc 19513991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 133
Target Start/End: Complemental strand, 31862270 - 31862219
Alignment:
Q  82 tgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactca 133  Q
    |||||||||| |||||||||||||||||||||| ||||  |||||| |||||    
T  31862270 tgtctttaggatggctgaaagctaaaaatgtcacttttgtttttggtactca 31862219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 145
Target Start/End: Complemental strand, 4399573 - 4399491
Alignment:
Q  63 cttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtc 145  Q
    |||||||| |||||||| || |||||||   |||||||||||||||| | || ||||  |||||||||||||  |||||||||    
T  4399573 cttgataaaattaagttgttatctttagcgcggctgaaagctaaaaaagccacttttgtttttggaactcagatgtggtggtc 4399491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 3199601 - 3199653
Alignment:
Q  93 tggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtc 145  Q
    ||||||||||||||||||| || ||||  |||||||||||||  |||||||||    
T  3199601 tggctgaaagctaaaaatgccacttttgtttttggaactcagatgtggtggtc 3199653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 182
Target Start/End: Original strand, 8873244 - 8873389
Alignment:
Q  37 atgttattactcccattccctgtctgcttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagca 136  Q
    ||||| |||| ||||| || ||| | ||||||||| |||||||  |||||||||||||||||||||||||||| |  |  |||  |||||||||||| ||    
T  8873244 atgttgttacccccatcccttgtttacttgataaggttaagttgatgtctttaggttggctgaaagctaaaaaagctacctttgtttttggaactcaaca 8873343  T
Q  137 gtggtggtctagccctttaacttgcttgggtataggctaatgtttt 182  Q
    ||||||||| |||||| |   ||| |||||||| ||||||||||||    
T  8873344 gtggtggtcaagccctcttgtttgtttgggtattggctaatgtttt 8873389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 23347913 - 23348029
Alignment:
Q  66 gataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtctagccctttaacttgcttgg 165  Q
    |||||||||||||| |||||| |||||||| ||||||||||||| |  |  |||  |||||| |||||||||||||||||  ||||| |   ||| ||||    
T  23347913 gataagattaagttgttgtctctaggttggttgaaagctaaaaaagctacctttgtttttgggactcagcagtggtggtcacgccctcttgtttgtttgg 23348012  T
Q  166 gtataggctaatgtttt 182  Q
    |||| | ||||||||||    
T  23348013 gtattgactaatgtttt 23348029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 176
Target Start/End: Complemental strand, 4406690 - 4406595
Alignment:
Q  81 ttgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtctagccctttaacttgcttgggtataggctaa 176  Q
    |||||||||||||||||||||||||| || | ||  |||  |||||| ||||||  ||||| ||| ||||||||| |||| ||||| |||||||||    
T  4406690 ttgtctttaggttggctgaaagctaagaaagccacatttggttttggtactcagaggtggtagtcgagccctttagcttgtttgggcataggctaa 4406595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 81 - 180
Target Start/End: Complemental strand, 968162 - 968063
Alignment:
Q  81 ttgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtctagccctttaacttgcttgggtataggctaatgtt 180  Q
    ||||||||||| || ||||||||||||||   ||||||||||| ||||||||| || |||||||| | |||||||||||| ||||| |||||| ||||||    
T  968162 ttgtctttaggatgactgaaagctaaaaaaaccatttttacttatggaactcaacaatggtggtcaaaccctttaacttgtttgggcataggccaatgtt 968063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 3104625 - 3104553
Alignment:
Q  37 atgttattactcccattccctgtctgcttgataagattaagttattgtctttaggttggctgaaagctaaaaa 109  Q
    ||||||| ||||||||||| ||| |||| || ||| ||||| | |||||||||||||||||||||||||||||    
T  3104625 atgttataactcccattccatgtttgctagacaaggttaagatgttgtctttaggttggctgaaagctaaaaa 3104553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 145
Target Start/End: Complemental strand, 3632496 - 3632417
Alignment:
Q  66 gataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtc 145  Q
    |||||||||||| | ||||||||||||| | ||||||||||||| || || |||  |||||| |||||||||||||||||    
T  3632496 gataagattaagctgttgtctttaggttagttgaaagctaaaaaagttatctttgtttttgggactcagcagtggtggtc 3632417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 176
Target Start/End: Original strand, 31025941 - 31026056
Alignment:
Q  61 tgcttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtctagccctttaacttg 160  Q
    |||||||||| |||||||| || || ||||  ||||||||||||||||||| || ||||  |||||||||||||  ||||||||| || |||||  ||||    
T  31025941 tgcttgataatattaagttgttatcgttagtgtggctgaaagctaaaaatgccacttttgtttttggaactcagatgtggtggtcaagtcctttggcttg 31026040  T
Q  161 cttgggtataggctaa 176  Q
     ||||| || ||||||    
T  31026041 tttgggcattggctaa 31026056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 63 - 145
Target Start/End: Complemental strand, 19728183 - 19728101
Alignment:
Q  63 cttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtc 145  Q
    |||||||| |||||||| || |||||||  ||||||||||||||||||| || ||||  |||||||||||||  |||||||||    
T  19728183 cttgataaaattaagttgttatctttagcgtggctgaaagctaaaaatgccacttttgtttttggaactcagatgtggtggtc 19728101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 182
Target Start/End: Complemental strand, 13439769 - 13439630
Alignment:
Q  43 ttactcccattccctgtctgcttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtg 142  Q
    |||| ||||| |||||| | ||||||||| ||||| | |||||| |||||||| ||||||||||||| |  |  |||  |||||| ||||||||||| ||    
T  13439769 ttacccccatcccctgtttacttgataaggttaagctgttgtctctaggttggttgaaagctaaaaaagctacctttgtttttgggactcagcagtgttg 13439670  T
Q  143 gtctagccctttaacttgcttgggtataggctaatgtttt 182  Q
    ||| |||||| |   ||| |||||||| |||||| |||||    
T  13439669 gtcaagccctcttgtttgtttgggtattggctaaggtttt 13439630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 182
Target Start/End: Complemental strand, 28327078 - 28326933
Alignment:
Q  37 atgttattactcccattccctgtctgcttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagca 136  Q
    ||||| |||| ||||| || ||| | || |||||||||||| |  ||||| |||||||| ||||||||||||| |  || |||  |||||| ||||||||    
T  28327078 atgttgttacccccatcccttgtttactagataagattaagctgctgtctctaggttggttgaaagctaaaaaagctatatttgtttttgggactcagca 28326979  T
Q  137 gtggtggtctagccctttaacttgcttgggtataggctaatgtttt 182  Q
    |||| |||| | |||| |   ||| |||||||| ||||||||||||    
T  28326978 gtggcggtcaaaccctcttgtttgtttgggtattggctaatgtttt 28326933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 109
Target Start/End: Original strand, 12379179 - 12379215
Alignment:
Q  73 ttaagttattgtctttaggttggctgaaagctaaaaa 109  Q
    ||||||| |||||||||||||||||||||||||||||    
T  12379179 ttaagttgttgtctttaggttggctgaaagctaaaaa 12379215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 111
Target Start/End: Complemental strand, 30385890 - 30385848
Alignment:
Q  69 aagattaagttattgtctttaggttggctgaaagctaaaaatg 111  Q
    ||||||||||| |||||| |||||||| |||||||||||||||    
T  30385890 aagattaagttgttgtctctaggttggttgaaagctaaaaatg 30385848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 61 - 166
Target Start/End: Complemental strand, 42565527 - 42565422
Alignment:
Q  61 tgcttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtctagccctttaacttg 160  Q
    |||||||||| |||||||| || || ||||  ||||| ||||||||||||| || ||||  ||||||||||||   |||||||||  | |||||| ||||    
T  42565527 tgcttgataaaattaagttgttatcgttagtgtggcttaaagctaaaaatgccacttttgtttttggaactcatatgtggtggtcatgtcctttagcttg 42565428  T
Q  161 cttggg 166  Q
     |||||    
T  42565427 tttggg 42565422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 133
Target Start/End: Original strand, 13554620 - 13554692
Alignment:
Q  61 tgcttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactca 133  Q
    |||||||||| |||||||| || || ||||  ||||| ||||||||||||| || ||||  ||||||||||||    
T  13554620 tgcttgataaaattaagttgttatcgttagtgtggcttaaagctaaaaatgccacttttgtttttggaactca 13554692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 3e-17; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 37 - 182
Target Start/End: Complemental strand, 55298345 - 55298200
Alignment:
Q  37 atgttattactcccattccctgtctgcttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagca 136  Q
    ||||| |||| || || |||||| | ||||||||||||||||| |||||| |||||||| ||||||||||||| |  |  |||  |||||| ||||||||    
T  55298345 atgttgttacccctatcccctgtttacttgataagattaagttgttgtctctaggttggttgaaagctaaaaaagctacctttgtttttgggactcagca 55298246  T
Q  137 gtggtggtctagccctttaacttgcttgggtataggctaatgtttt 182  Q
    ||||||||| |||||| |   ||| |||||||| |||||| |||||    
T  55298245 gtggtggtcaagccctcttgtttgtttgggtattggctaaggtttt 55298200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 37 - 152
Target Start/End: Complemental strand, 33313121 - 33313006
Alignment:
Q  37 atgttattactcccattccctgtctgcttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagca 136  Q
    ||||| |||||||||| || ||| | || |||||||||||| |  |||||||||||||| |||||| |||||| || | ||||  |||||| ||||||||    
T  33313121 atgttgttactcccatcccttgtttactagataagattaagctgctgtctttaggttggttgaaagttaaaaaagttacttttgtttttgggactcagca 33313022  T
Q  137 gtggtggtctagccct 152  Q
    ||||||||| ||||||    
T  33313021 gtggtggtcaagccct 33313006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 182
Target Start/End: Original strand, 23873905 - 23874039
Alignment:
Q  48 cccattccctgtctgcttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtcta 147  Q
    ||||| |||||| | ||||||||||||||| | |||||| |||||||| ||||||||||||| |  |  |||  |||||| ||||||||||||||||| |    
T  23873905 cccatcccctgtttacttgataagattaagctgttgtctctaggttggttgaaagctaaaaaagctacctttgtttttgggactcagcagtggtggtcaa 23874004  T
Q  148 gccctttaacttgcttgggtataggctaatgtttt 182  Q
    ||||| |   ||| |||||||| |||||| |||||    
T  23874005 gccctcttgtttgtttgggtattggctaaggtttt 23874039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 177
Target Start/End: Original strand, 42169487 - 42169577
Alignment:
Q  87 ttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtctagccctttaacttgcttgggtataggctaat 177  Q
    ||||||||||||||||| ||| ||||||| |||  |||||| || |||  ||||||||| ||||||||| |||| |||| ||| |||||||    
T  42169487 ttaggttggctgaaagcaaaagatgtcatgtttgtttttggcacgcagaggtggtggtcaagccctttagcttgtttggctattggctaat 42169577  T

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Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 145
Target Start/End: Original strand, 9993279 - 9993364
Alignment:
Q  60 ctgcttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtc 145  Q
    ||||||||||| |||||||| || || |||   ||||||||| |||||||||||| ||||  |||||||||||||  |||||||||    
T  9993279 ctgcttgataaaattaagttgttatcgttatagtggctgaaaactaaaaatgtcacttttgtttttggaactcagatgtggtggtc 9993364  T

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Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 182
Target Start/End: Original strand, 12776654 - 12776770
Alignment:
Q  66 gataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtctagccctttaacttgcttgg 165  Q
    |||||||||||| |  ||||| |||||||| ||||||||||||  |  |  |||  |||||| ||||||||||||||||| |||||| |   ||| ||||    
T  12776654 gataagattaagctgctgtctctaggttggttgaaagctaaaagagctacctttgtttttgggactcagcagtggtggtcaagccctcttgtttgtttgg 12776753  T
Q  166 gtataggctaatgtttt 182  Q
    |||| ||||||||||||    
T  12776754 gtattggctaatgtttt 12776770  T

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Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 133
Target Start/End: Original strand, 42953937 - 42954007
Alignment:
Q  63 cttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactca 133  Q
    |||||||| |||||||| || |||||||  |||||||||| |||||||| || ||||  ||||||||||||    
T  42953937 cttgataaaattaagttgttatctttagcgtggctgaaagataaaaatgccacttttgtttttggaactca 42954007  T

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Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 10426351 - 10426420
Alignment:
Q  97 tgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtctagccctttaacttgcttggg 166  Q
    |||||||||||||||||| ||||| |||| ||||||||  ||||||||| || ||| | ||||| |||||    
T  10426351 tgaaagctaaaaatgtcacttttattttttgaactcagatgtggtggtcaagtcctatgacttgtttggg 10426420  T

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Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 61 - 154
Target Start/End: Complemental strand, 37615267 - 37615174
Alignment:
Q  61 tgcttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtctagcccttt 154  Q
    |||||||||| |||||||| || || ||||   ||||||||| |||||||| || ||||  |||||||||||||  ||||||||| || |||||    
T  37615267 tgcttgataaaattaagttgttatcgttagtgcggctgaaagttaaaaatgccacttttgtttttggaactcagatgtggtggtcaagtccttt 37615174  T

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Target: scaffold0287 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 145
Target Start/End: Original strand, 13589 - 13668
Alignment:
Q  66 gataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaactcagcagtggtggtc 145  Q
    |||||||||||| | ||||||||||||| | ||||||||||||| || || |||  |||||| |||||||||||||||||    
T  13589 gataagattaagctgttgtctttaggttagttgaaagctaaaaaagttatctttgtttttgggactcagcagtggtggtc 13668  T

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Target: scaffold0029 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 179
Target Start/End: Original strand, 135048 - 135196
Alignment:
Q  31 ttaacaatgttattactcccattccctgtctgcttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaac 130  Q
    |||| ||||| || |||||||||||| || || | |||||| | ||| | ||||| |||| |||| |||| |||||||| |  | ||||   ||||| ||    
T  135048 ttaataatgtaataactcccattccccgtttgttagataaggtcaagatgttgtccttagcttggttgaaggctaaaaaagctacttttgtgtttggtac 135147  T
Q  131 tcagcagtggtggtctagccctttaacttgcttgggtataggctaatgt 179  Q
    |||||||||||||||| ||||| | |  || ||||||||||||| ||||    
T  135148 tcagcagtggtggtcttgccctctcatgtgtttgggtataggctgatgt 135196  T

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Target: scaffold0002 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 179
Target Start/End: Original strand, 312875 - 313023
Alignment:
Q  31 ttaacaatgttattactcccattccctgtctgcttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaac 130  Q
    |||| ||||| || |||||||||||| || || | |||||| | ||| | ||||| |||| |||| |||| |||||||| |  | ||||   ||||| ||    
T  312875 ttaataatgtaataactcccattccccgtttgttagataaggtcaagatgttgtccttagcttggttgaaggctaaaaaagctacttttgtgtttggtac 312974  T
Q  131 tcagcagtggtggtctagccctttaacttgcttgggtataggctaatgt 179  Q
    |||||||||||||||| ||||| | |  || ||||||||||||| ||||    
T  312975 tcagcagtggtggtcttgccctctcatgtgtttgggtataggctgatgt 313023  T

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Target: scaffold0002; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 179
Target Start/End: Original strand, 328329 - 328477
Alignment:
Q  31 ttaacaatgttattactcccattccctgtctgcttgataagattaagttattgtctttaggttggctgaaagctaaaaatgtcatttttacttttggaac 130  Q
    |||| ||||| || |||||||||||| || || | |||||| | ||| | ||||| |||| |||| |||| |||||||| |  | ||||   ||||| ||    
T  328329 ttaataatgtaataactcccattccccgtttgttagataaggtcaagatgttgtccttagcttggttgaaggctaaaaaagctacttttgtgtttggtac 328428  T
Q  131 tcagcagtggtggtctagccctttaacttgcttgggtataggctaatgt 179  Q
    |||||||||||||||| ||||| | |  || ||||||||||||| ||||    
T  328429 tcagcagtggtggtcttgccctctcatgtgtttgggtataggctgatgt 328477  T

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