View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8127_low_27 (Length: 243)

Name: NF8127_low_27
Description: NF8127
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8127_low_27
NF8127_low_27
[»] chr1 (62 HSPs)
chr1 (3-233)||(29144332-29144550)
chr1 (3-108)||(48450562-48450666)
chr1 (36-108)||(6612178-6612250)
chr1 (36-111)||(46348390-46348465)
chr1 (1-40)||(1486654-1486693)
chr1 (37-98)||(113289-113350)
chr1 (3-40)||(42359401-42359438)
chr1 (36-80)||(18190115-18190159)
chr1 (3-102)||(22881579-22881689)
chr1 (36-123)||(38078668-38078756)
chr1 (36-108)||(41877477-41877549)
chr1 (36-87)||(21378579-21378630)
chr1 (36-87)||(40258940-40258991)
chr1 (34-108)||(398770-398844)
chr1 (30-92)||(31015039-31015101)
chr1 (3-40)||(9828125-9828162)
chr1 (3-40)||(16297233-16297270)
chr1 (3-40)||(40917830-40917867)
chr1 (36-108)||(1486716-1486788)
chr1 (36-112)||(1815233-1815309)
chr1 (36-123)||(3490397-3490484)
chr1 (36-108)||(5927347-5927419)
chr1 (4-40)||(18190061-18190097)
chr1 (39-111)||(18556466-18556538)
chr1 (36-80)||(24577193-24577237)
chr1 (44-124)||(36878425-36878505)
chr1 (3-39)||(40258885-40258921)
chr1 (4-40)||(46940761-46940797)
chr1 (36-108)||(47989478-47989549)
chr1 (5-40)||(113363-113398)
chr1 (4-39)||(5944365-5944400)
chr1 (1-40)||(8117120-8117159)
chr1 (36-79)||(18337338-18337381)
chr1 (36-87)||(22515894-22515945)
chr1 (3-34)||(27965952-27965983)
chr1 (3-78)||(30359398-30359472)
chr1 (39-102)||(31672905-31672968)
chr1 (5-40)||(40181941-40181976)
chr1 (36-107)||(42359456-42359527)
chr1 (5-39)||(1815328-1815362)
chr1 (64-102)||(9103626-9103664)
chr1 (34-108)||(14359527-14359600)
chr1 (3-37)||(21366004-21366038)
chr1 (3-37)||(22515839-22515873)
chr1 (44-102)||(22794093-22794151)
chr1 (3-40)||(1704947-1704984)
chr1 (3-40)||(5898218-5898255)
chr1 (3-40)||(6427545-6427582)
chr1 (3-40)||(6612112-6612149)
chr1 (3-40)||(17831474-17831511)
chr1 (36-93)||(19058863-19058920)
chr1 (3-40)||(19562567-19562604)
chr1 (11-80)||(34298444-34298513)
chr1 (3-40)||(37598901-37598938)
chr1 (36-80)||(1704999-1705043)
chr1 (44-108)||(5898281-5898345)
chr1 (36-80)||(8010294-8010338)
chr1 (12-40)||(9690234-9690262)
chr1 (4-40)||(16164257-16164293)
chr1 (4-40)||(17778623-17778659)
chr1 (36-80)||(28273095-28273139)
chr1 (3-39)||(47989579-47989615)
[»] chr5 (44 HSPs)
chr5 (1-108)||(14674249-14674358)
chr5 (36-124)||(21576752-21576841)
chr5 (36-101)||(24906308-24906373)
chr5 (1-80)||(15405027-15405106)
chr5 (36-153)||(21191063-21191181)
chr5 (36-102)||(17177030-17177096)
chr5 (36-112)||(39698517-39698593)
chr5 (36-102)||(31084309-31084375)
chr5 (37-111)||(43001777-43001851)
chr5 (36-101)||(6247609-6247674)
chr5 (36-120)||(7997173-7997258)
chr5 (3-40)||(17088361-17088398)
chr5 (3-39)||(15382556-15382592)
chr5 (36-108)||(21522730-21522802)
chr5 (36-108)||(21533296-21533368)
chr5 (36-107)||(19579682-19579753)
chr5 (36-87)||(42893361-42893412)
chr5 (1-39)||(38464323-38464361)
chr5 (36-124)||(8419990-8420079)
chr5 (3-40)||(14873592-14873629)
chr5 (3-40)||(21191008-21191045)
chr5 (3-40)||(39268550-39268587)
chr5 (36-108)||(6326304-6326376)
chr5 (7-39)||(7677787-7677819)
chr5 (36-108)||(13287406-13287478)
chr5 (64-108)||(19552578-19552622)
chr5 (3-39)||(19820340-19820376)
chr5 (36-87)||(41633736-41633787)
chr5 (66-108)||(36642799-36642841)
chr5 (3-37)||(39698625-39698659)
chr5 (3-40)||(17593675-17593712)
chr5 (4-33)||(19579789-19579818)
chr5 (3-40)||(21576697-21576734)
chr5 (3-40)||(23015936-23015973)
chr5 (3-40)||(31084398-31084435)
chr5 (3-40)||(35017113-35017150)
chr5 (2-39)||(39342513-39342550)
chr5 (3-40)||(43564951-43564988)
chr5 (4-40)||(2436981-2437017)
chr5 (4-44)||(15410390-15410430)
chr5 (3-39)||(17123119-17123154)
chr5 (3-39)||(21194075-21194111)
chr5 (41-93)||(27932230-27932282)
chr5 (36-108)||(37328851-37328923)
[»] chr6 (56 HSPs)
chr6 (36-123)||(12696290-12696376)
chr6 (36-99)||(7977837-7977900)
chr6 (3-108)||(426490-426593)
chr6 (3-102)||(7938102-7938207)
chr6 (36-102)||(10770681-10770747)
chr6 (36-102)||(16766683-16766749)
chr6 (4-100)||(17341634-17341735)
chr6 (38-111)||(17841598-17841671)
chr6 (36-101)||(31959146-31959211)
chr6 (37-108)||(17435179-17435250)
chr6 (36-108)||(9107377-9107449)
chr6 (36-108)||(16833288-16833360)
chr6 (4-95)||(25207757-25207846)
chr6 (36-108)||(34595114-34595186)
chr6 (36-124)||(1191707-1191796)
chr6 (41-123)||(5970120-5970202)
chr6 (36-83)||(6327525-6327572)
chr6 (37-108)||(8776981-8777052)
chr6 (41-123)||(31429015-31429097)
chr6 (4-93)||(7801132-7801220)
chr6 (3-40)||(8389420-8389457)
chr6 (3-40)||(9025457-9025494)
chr6 (36-109)||(28152078-28152150)
chr6 (3-40)||(31959220-31959257)
chr6 (36-108)||(8365526-8365598)
chr6 (36-108)||(23771559-23771630)
chr6 (4-40)||(28152168-28152204)
chr6 (36-80)||(28715303-28715347)
chr6 (36-80)||(31384928-31384972)
chr6 (5-40)||(9107313-9107348)
chr6 (4-38)||(3209471-3209505)
chr6 (44-102)||(7265608-7265666)
chr6 (44-90)||(7569183-7569229)
chr6 (6-40)||(8365463-8365497)
chr6 (64-102)||(12868710-12868748)
chr6 (2-40)||(21924902-21924940)
chr6 (36-93)||(1681753-1681810)
chr6 (39-108)||(3398599-3398667)
chr6 (37-102)||(6349745-6349810)
chr6 (3-40)||(7248439-7248476)
chr6 (3-40)||(8776920-8776957)
chr6 (11-40)||(16766778-16766807)
chr6 (3-40)||(17327602-17327639)
chr6 (3-40)||(17841541-17841578)
chr6 (1-34)||(26178628-26178661)
chr6 (3-40)||(31385000-31385037)
chr6 (3-40)||(34595204-34595241)
chr6 (36-80)||(6898288-6898332)
chr6 (4-40)||(7930371-7930407)
chr6 (4-40)||(9027237-9027273)
chr6 (36-80)||(9522899-9522943)
chr6 (44-120)||(9658848-9658923)
chr6 (3-39)||(10339066-10339102)
chr6 (46-114)||(10842506-10842574)
chr6 (36-80)||(15489739-15489783)
chr6 (3-39)||(32978851-32978887)
[»] chr4 (47 HSPs)
chr4 (37-118)||(11596360-11596442)
chr4 (36-118)||(30298916-30298999)
chr4 (36-118)||(30327784-30327867)
chr4 (36-108)||(21945483-21945555)
chr4 (3-125)||(22440569-22440695)
chr4 (36-102)||(34306811-34306876)
chr4 (3-40)||(23292938-23292975)
chr4 (36-108)||(23292993-23293065)
chr4 (36-90)||(29205442-29205496)
chr4 (37-87)||(51701259-51701309)
chr4 (3-40)||(28084594-28084631)
chr4 (3-39)||(715557-715593)
chr4 (3-39)||(752883-752919)
chr4 (36-108)||(2361982-2362054)
chr4 (64-108)||(12628620-12628664)
chr4 (36-80)||(28964255-28964299)
chr4 (36-87)||(3947773-3947824)
chr4 (4-39)||(16184902-16184937)
chr4 (37-108)||(19482648-19482719)
chr4 (4-39)||(29205539-29205574)
chr4 (36-87)||(38847019-38847070)
chr4 (37-108)||(40481617-40481687)
chr4 (36-118)||(12895123-12895204)
chr4 (42-119)||(14465088-14465166)
chr4 (36-102)||(16303273-16303339)
chr4 (37-126)||(27706185-27706274)
chr4 (3-37)||(28964200-28964234)
chr4 (3-37)||(53381542-53381576)
chr4 (3-40)||(3712465-3712502)
chr4 (3-40)||(3947713-3947750)
chr4 (2-39)||(5922542-5922579)
chr4 (36-81)||(6485618-6485663)
chr4 (4-37)||(12895227-12895260)
chr4 (3-40)||(18513187-18513224)
chr4 (2-39)||(21945574-21945611)
chr4 (3-40)||(24343583-24343620)
chr4 (3-40)||(30094083-30094120)
chr4 (3-40)||(30982819-30982856)
chr4 (3-40)||(32910633-32910670)
chr4 (36-124)||(49430990-49431078)
chr4 (3-40)||(49431096-49431133)
chr4 (3-39)||(8423670-8423706)
chr4 (36-108)||(14126118-14126190)
chr4 (4-40)||(19482749-19482785)
chr4 (4-40)||(21873315-21873351)
chr4 (4-40)||(21929176-21929212)
chr4 (36-80)||(54580030-54580074)
[»] chr3 (57 HSPs)
chr3 (36-124)||(25775471-25775561)
chr3 (36-102)||(10268493-10268559)
chr3 (36-108)||(3610613-3610685)
chr3 (37-101)||(4987299-4987363)
chr3 (36-108)||(15796301-15796373)
chr3 (36-108)||(55401055-55401127)
chr3 (3-40)||(4987232-4987269)
chr3 (3-40)||(34185064-34185101)
chr3 (34-122)||(14216859-14216946)
chr3 (34-122)||(14222988-14223075)
chr3 (3-87)||(21256960-21257044)
chr3 (36-123)||(21479083-21479170)
chr3 (36-108)||(28917981-28918053)
chr3 (4-40)||(40052382-40052418)
chr3 (3-39)||(40993287-40993323)
chr3 (3-125)||(11658779-11658903)
chr3 (36-111)||(20503443-20503517)
chr3 (36-87)||(26508111-26508162)
chr3 (36-110)||(10954930-10955004)
chr3 (36-114)||(55212937-55213015)
chr3 (3-40)||(15999962-15999999)
chr3 (39-108)||(26492215-26492284)
chr3 (3-40)||(27505321-27505358)
chr3 (3-40)||(55401145-55401182)
chr3 (36-108)||(8587028-8587100)
chr3 (66-114)||(10318071-10318119)
chr3 (3-39)||(20503536-20503572)
chr3 (36-108)||(24205048-24205120)
chr3 (4-40)||(25775577-25775613)
chr3 (36-108)||(35312034-35312106)
chr3 (36-87)||(1509540-1509591)
chr3 (3-99)||(11610510-11610616)
chr3 (3-93)||(14979176-14979256)
chr3 (1-40)||(21720842-21720881)
chr3 (36-87)||(51206360-51206411)
chr3 (3-41)||(1509636-1509674)
chr3 (6-40)||(10955022-10955056)
chr3 (1-80)||(12083911-12083992)
chr3 (36-110)||(14209092-14209165)
chr3 (1-39)||(28812597-28812635)
chr3 (3-40)||(1509604-1509641)
chr3 (3-40)||(3163983-3164020)
chr3 (44-93)||(8039850-8039899)
chr3 (34-102)||(14747547-14747616)
chr3 (3-40)||(24204993-24205030)
chr3 (3-40)||(28918073-28918110)
chr3 (40-93)||(34910312-34910365)
chr3 (3-40)||(41961591-41961628)
chr3 (3-39)||(3631755-3631791)
chr3 (36-80)||(4990974-4991018)
chr3 (4-40)||(7171571-7171607)
chr3 (36-108)||(8383237-8383309)
chr3 (3-39)||(8789500-8789536)
chr3 (36-108)||(14829670-14829741)
chr3 (4-40)||(21211364-21211400)
chr3 (4-40)||(25074865-25074901)
chr3 (36-80)||(49651793-49651837)
[»] chr7 (42 HSPs)
chr7 (36-108)||(13770671-13770743)
chr7 (36-108)||(24105658-24105730)
chr7 (3-108)||(18215149-18215265)
chr7 (36-102)||(24339628-24339694)
chr7 (3-40)||(5409783-5409820)
chr7 (36-101)||(7438693-7438758)
chr7 (37-102)||(25481888-25481953)
chr7 (3-44)||(32287415-32287456)
chr7 (36-108)||(27945021-27945093)
chr7 (36-108)||(43027476-43027548)
chr7 (36-114)||(9408341-9408420)
chr7 (3-40)||(598278-598315)
chr7 (3-40)||(6490786-6490823)
chr7 (3-40)||(9778575-9778612)
chr7 (3-40)||(14729773-14729810)
chr7 (3-123)||(30813778-30813904)
chr7 (3-40)||(43027416-43027453)
chr7 (36-108)||(11061083-11061155)
chr7 (36-80)||(21880160-21880204)
chr7 (4-40)||(24105748-24105784)
chr7 (5-37)||(24339726-24339758)
chr7 (36-80)||(26033468-26033512)
chr7 (3-39)||(40287314-40287350)
chr7 (36-108)||(43249973-43250045)
chr7 (1-40)||(21864878-21864917)
chr7 (1-40)||(40131949-40131988)
chr7 (36-102)||(5409843-5409909)
chr7 (36-102)||(21930615-21930680)
chr7 (109-155)||(24105629-24105675)
chr7 (3-40)||(1433529-1433566)
chr7 (3-40)||(13770766-13770803)
chr7 (36-93)||(28155565-28155622)
chr7 (3-40)||(29763141-29763178)
chr7 (4-40)||(32093967-32094004)
chr7 (3-40)||(43250074-43250111)
chr7 (4-40)||(3294257-3294293)
chr7 (36-80)||(3991332-3991376)
chr7 (3-35)||(8842291-8842323)
chr7 (36-80)||(19213811-19213855)
chr7 (3-39)||(21880223-21880259)
chr7 (42-102)||(23191882-23191942)
chr7 (4-40)||(38804502-38804538)
[»] chr2 (46 HSPs)
chr2 (36-123)||(21374706-21374794)
chr2 (36-108)||(15972853-15972925)
chr2 (36-108)||(30404857-30404929)
chr2 (3-111)||(39323241-39323345)
chr2 (6-112)||(34221478-34221580)
chr2 (36-111)||(37558954-37559029)
chr2 (36-108)||(21624246-21624319)
chr2 (3-40)||(37419824-37419861)
chr2 (3-39)||(2438671-2438707)
chr2 (36-108)||(6940235-6940307)
chr2 (36-108)||(18421943-18422015)
chr2 (36-108)||(20539681-20539753)
chr2 (3-108)||(19536373-19536477)
chr2 (23-125)||(12940930-12941030)
chr2 (36-102)||(18841020-18841086)
chr2 (44-114)||(28677883-28677953)
chr2 (44-114)||(30527610-30527680)
chr2 (3-40)||(19942335-19942372)
chr2 (36-108)||(23058449-23058522)
chr2 (3-40)||(26769592-26769629)
chr2 (3-40)||(38117111-38117148)
chr2 (37-102)||(38117167-38117232)
chr2 (44-108)||(16069269-16069333)
chr2 (3-39)||(18840965-18841001)
chr2 (3-39)||(23058396-23058432)
chr2 (36-80)||(30717537-30717581)
chr2 (68-112)||(34994015-34994059)
chr2 (3-80)||(42832244-42832327)
chr2 (43-90)||(1886892-1886939)
chr2 (36-87)||(2438726-2438777)
chr2 (36-87)||(11223870-11223921)
chr2 (64-111)||(19580316-19580363)
chr2 (44-126)||(28412312-28412394)
chr2 (3-40)||(14996171-14996208)
chr2 (36-108)||(14996230-14996303)
chr2 (3-40)||(15657945-15657982)
chr2 (3-40)||(37559047-37559084)
chr2 (64-117)||(37986751-37986803)
chr2 (3-40)||(42511334-42511371)
chr2 (36-80)||(4882703-4882747)
chr2 (4-40)||(10535698-10535734)
chr2 (3-39)||(11223805-11223841)
chr2 (4-40)||(12224293-12224329)
chr2 (36-80)||(12668430-12668474)
chr2 (36-108)||(20473302-20473374)
chr2 (36-108)||(36756351-36756423)
[»] scaffold0103 (2 HSPs)
scaffold0103 (37-111)||(51788-51862)
scaffold0103 (3-40)||(51893-51930)
[»] scaffold0027 (1 HSPs)
scaffold0027 (3-108)||(46662-46764)
[»] scaffold0018 (2 HSPs)
scaffold0018 (36-123)||(192256-192342)
scaffold0018 (36-108)||(178825-178898)
[»] chr8 (50 HSPs)
chr8 (3-88)||(8798805-8798890)
chr8 (38-102)||(30271300-30271364)
chr8 (36-123)||(24669399-24669485)
chr8 (37-111)||(36450762-36450836)
chr8 (39-108)||(4673435-4673504)
chr8 (3-40)||(22943301-22943338)
chr8 (1-45)||(8343032-8343076)
chr8 (36-108)||(18170489-18170561)
chr8 (36-108)||(18634057-18634129)
chr8 (36-108)||(20873049-20873121)
chr8 (36-108)||(22197749-22197821)
chr8 (37-101)||(22595981-22596045)
chr8 (36-108)||(22651956-22652028)
chr8 (36-108)||(29510311-29510383)
chr8 (34-102)||(30077392-30077460)
chr8 (1-40)||(8343397-8343436)
chr8 (36-87)||(25566842-25566893)
chr8 (1-40)||(36450704-36450743)
chr8 (36-87)||(41831947-41831998)
chr8 (3-93)||(27213542-27213632)
chr8 (36-93)||(4298893-4298950)
chr8 (3-36)||(17751730-17751763)
chr8 (3-36)||(17760717-17760750)
chr8 (3-40)||(22652057-22652094)
chr8 (3-40)||(29510245-29510282)
chr8 (39-100)||(31556985-31557045)
chr8 (36-80)||(4948660-4948704)
chr8 (36-108)||(8343296-8343368)
chr8 (37-101)||(24727760-24727826)
chr8 (36-107)||(44067497-44067568)
chr8 (37-91)||(7442842-7442896)
chr8 (1-35)||(13436920-13436954)
chr8 (36-102)||(13436971-13437037)
chr8 (3-37)||(15816070-15816104)
chr8 (36-102)||(15816136-15816202)
chr8 (36-102)||(25192354-25192420)
chr8 (3-40)||(5813662-5813699)
chr8 (3-40)||(20679347-20679384)
chr8 (1-30)||(25566910-25566939)
chr8 (3-40)||(40064032-40064069)
chr8 (3-40)||(40332261-40332298)
chr8 (3-40)||(44067597-44067634)
chr8 (36-80)||(2572063-2572107)
chr8 (1-37)||(4673364-4673400)
chr8 (36-80)||(8342980-8343024)
chr8 (1-33)||(16641919-16641951)
chr8 (3-39)||(24205760-24205796)
chr8 (39-87)||(28642409-28642457)
chr8 (7-39)||(44462151-44462183)
chr8 (7-39)||(44469684-44469716)
[»] scaffold0223 (1 HSPs)
scaffold0223 (36-108)||(20152-20224)
[»] scaffold0136 (2 HSPs)
scaffold0136 (36-108)||(3856-3928)
scaffold0136 (3-39)||(3790-3826)
[»] scaffold0004 (3 HSPs)
scaffold0004 (36-112)||(92783-92859)
scaffold0004 (36-101)||(123612-123680)
scaffold0004 (3-39)||(92893-92929)
[»] scaffold0652 (2 HSPs)
scaffold0652 (36-102)||(469-535)
scaffold0652 (3-40)||(414-451)
[»] scaffold0722 (1 HSPs)
scaffold0722 (37-102)||(7040-7105)
[»] scaffold0085 (1 HSPs)
scaffold0085 (7-115)||(25971-26079)
[»] scaffold0053 (1 HSPs)
scaffold0053 (36-108)||(8778-8850)
[»] scaffold0021 (1 HSPs)
scaffold0021 (36-108)||(130462-130534)
[»] scaffold0050 (1 HSPs)
scaffold0050 (36-87)||(70279-70330)
[»] scaffold0019 (1 HSPs)
scaffold0019 (3-40)||(71806-71843)
[»] scaffold0003 (1 HSPs)
scaffold0003 (3-40)||(241675-241712)
[»] scaffold0793 (1 HSPs)
scaffold0793 (3-39)||(4833-4869)
[»] scaffold0066 (1 HSPs)
scaffold0066 (41-93)||(33375-33427)
[»] scaffold0007 (1 HSPs)
scaffold0007 (36-108)||(225275-225347)
[»] scaffold0361 (1 HSPs)
scaffold0361 (38-93)||(14525-14580)
[»] scaffold0246 (1 HSPs)
scaffold0246 (37-108)||(19556-19626)
[»] scaffold0171 (1 HSPs)
scaffold0171 (36-123)||(23386-23472)
[»] scaffold0025 (1 HSPs)
scaffold0025 (36-86)||(23771-23822)
[»] scaffold0128 (1 HSPs)
scaffold0128 (3-49)||(32765-32811)
[»] scaffold0009 (1 HSPs)
scaffold0009 (3-37)||(188473-188507)
[»] scaffold0086 (1 HSPs)
scaffold0086 (3-40)||(3009-3046)
[»] scaffold0306 (1 HSPs)
scaffold0306 (40-108)||(13380-13448)
[»] scaffold0152 (1 HSPs)
scaffold0152 (40-108)||(21879-21947)
[»] scaffold0049 (1 HSPs)
scaffold0049 (36-80)||(63781-63825)
[»] scaffold0022 (1 HSPs)
scaffold0022 (44-108)||(90823-90887)
[»] scaffold0011 (1 HSPs)
scaffold0011 (36-80)||(17756-17800)


Alignment Details
Target: chr1 (Bit Score: 158; Significance: 3e-84; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 3 - 233
Target Start/End: Original strand, 29144332 - 29144550
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 102  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||    
T  29144332 gacactcttcggattaggcgtgttccggtgtcggacacttgtaattacactgcattatctatttttttcaaattattagctgtgtcggcgtatcagtgtc 29144431  T
Q  103 agtgtccgtgtctgtgtccgtgtcgtatctgtatccgtatccatgcttcataggtgtcaaccaagcttttattttgtactacttaggcagtagttttttc 202  Q
    |||||            ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  29144432 agtgt------------ccgtgtcgtatctgtgtccgtatccatgcttcatagatgtcaaccaagcttttattttgtactacttaggcagtagttttttc 29144519  T
Q  203 ctctttatatcagaaccttctctctctgcta 233  Q
    ||||||||||||||||||||||||| |||||    
T  29144520 ctctttatatcagaaccttctctctgtgcta 29144550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 108
Target Start/End: Original strand, 48450562 - 48450666
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 102  Q
    ||||||||||||||||| ||||||| | |||| ||||||||||||||||||  ||||| | ||||||||||||||||| |||||||||||| ||||||||    
T  48450562 gacactcctcggattagacgtgtcctg-tgtccgacacttgtaattacactaaattatgttattttttcaaattattagctgtgttggcgtgtcagtgtc 48450660  T
Q  103 agtgtc 108  Q
     |||||    
T  48450661 cgtgtc 48450666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 6612178 - 6612250
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||| | ||||| ||| |||| |||||    
T  6612178 gacacttgtaattacactgaattatgtaattttttcaaattattaactgtatcggcgtgtcattgtccgtgtc 6612250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 111
Target Start/End: Original strand, 46348390 - 46348465
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgt 111  Q
    ||||||||||||||||||  ||||| | ||||||||||||||||| |||||| ||||| |||||||| ||||||||    
T  46348390 gacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgt 46348465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 1486654 - 1486693
Alignment:
Q  1 cagacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  1486654 cagacactcctcggattaggcgtgtcccggtgtcggacac 1486693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 113350 - 113289
Alignment:
Q  37 acacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcag 98  Q
    |||||||||||||||||| ||||| | ||||||||||||||||| |||||| ||||| ||||    
T  113350 acacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcag 113289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 42359401 - 42359438
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  42359401 gacactcctcggattaggcgtgtcccggtgtcggacac 42359438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 18190115 - 18190159
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattatta 80  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||    
T  18190115 gacacttgtaattacactgaattatgtaattttttcaaattatta 18190159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 22881579 - 22881689
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcg-----------gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggc 91  Q
    ||||||||||||||||| |||||||||||||||           ||||||||||||||||||  ||||| | |||||||||||||||||  ||||| |||    
T  22881579 gacactcctcggattagacgtgtcccggtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggc 22881678  T
Q  92 gtatcagtgtc 102  Q
    || ||||||||    
T  22881679 gtgtcagtgtc 22881689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 38078668 - 38078756
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtcc-gtgtctgtgtccgt 123  Q
    |||||||||||||||| || ||||| | ||||||||||||||||| |||||| | ||| |||||||  |||||| ||||| ||||||||    
T  38078668 gacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcgacgtgtcagtgttcgtgtccggtgtccgtgtccgt 38078756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 41877477 - 41877549
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||||||||||||||  ||||| ||||||| ||||||||||| | |||| |||||| ||||||| |||||    
T  41877477 gacacttgtaattacactaaattatgtaattttctcaaattattagcggtgtcggcgtaccagtgtctgtgtc 41877549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 21378630 - 21378579
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgt 87  Q
    ||||||||||||||||||| ||||| |||||||||||| |||||| ||||||    
T  21378630 gacacttgtaattacactgaattatgtaattttttcaatttattagctgtgt 21378579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 40258940 - 40258991
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgt 87  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||| |||||    
T  40258940 gacacttgtaattacactgaattatgtgattttttcaaattattaattgtgt 40258991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 108
Target Start/End: Original strand, 398770 - 398844
Alignment:
Q  34 cggacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||| | ||||||||||| ||||| | ||||||||||||||||| | |||| ||||| |||||||| |||||    
T  398770 cggacacctataattacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtc 398844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 92
Target Start/End: Complemental strand, 31015101 - 31015039
Alignment:
Q  30 gtgtcggacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcg 92  Q
    ||||| ||||||||||||||||||| ||||| | ||||| ||||||||||| |||||| ||||    
T  31015101 gtgtccgacacttgtaattacactgaattatgtgattttctcaaattattagctgtgtaggcg 31015039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 9828162 - 9828125
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  9828162 gacactcctcggattagacgtgtcccggtgtcggacac 9828125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 16297233 - 16297270
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  16297233 gacactcctcggattaggcgtgtcctggtgtcggacac 16297270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 40917867 - 40917830
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||| |||||||||||||||||||||||||||||||||    
T  40917867 gacagtcctcggattaggcgtgtcccggtgtcggacac 40917830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 1486716 - 1486788
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||| ||||||||||| ||||| | ||||||||||||||||| ||||||  |||| ||||| || |||||    
T  1486716 gacacttataattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtatccgtgtc 1486788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 1815309 - 1815233
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgtg 112  Q
    ||||||||||||||||||| ||||| | ||||||| |||| ||||  ||||| ||||| |||||||| || ||||||    
T  1815309 gacacttgtaattacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatccgtg 1815233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 3490397 - 3490484
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtcc-gtgtctgtgtccgt 123  Q
    ||||||||||||||||||| || || || |||| ||||||||||| | |||| ||||| |||||||| |||||| |||||||| |||||    
T  3490397 gacacttgtaattacactgaataatgtagttttctcaaattattagcagtgtcggcgtgtcagtgtc-gtgtccggtgtctgtatccgt 3490484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 5927347 - 5927419
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    |||||||||||||||| |  ||||| | ||||||||||||||||| | ||||| |||| |||||||| |||||    
T  5927347 gacacttgtaattacattaaattatatgattttttcaaattattagcagtgttagcgtgtcagtgtccgtgtc 5927419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 18190061 - 18190097
Alignment:
Q  4 acactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||||||||| |||||||||||||||||||    
T  18190061 acactcctcggattaggtgtgtcccggtgtcggacac 18190097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 18556466 - 18556538
Alignment:
Q  39 acttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgt 111  Q
    ||||||||||||| |  ||||| | || |||||||||||||| |||||| ||||| |||||||| ||||||||    
T  18556466 acttgtaattacattaaattatgtgatattttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgt 18556538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 24577193 - 24577237
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattatta 80  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||    
T  24577193 gacacttgtaattacactgaattatgtgattttttcaaattatta 24577237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 124
Target Start/End: Complemental strand, 36878505 - 36878425
Alignment:
Q  44 taattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgtgtctgtgtccgtg 124  Q
    ||||||||||| ||||| | ||||| ||||||||||| | |||| ||||| ||||||||  |||||||||| || ||||||    
T  36878505 taattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtctatgtccgtgtccgtatccgtg 36878425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 40258885 - 40258921
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggaca 39  Q
    ||||||||||||||||||||||||| |||||||||||    
T  40258885 gacactcctcggattaggcgtgtcctggtgtcggaca 40258921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 46940761 - 46940797
Alignment:
Q  4 acactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||||||||||||||||||| ||||||||||||||    
T  46940761 acactcctcggattaggcgtgttccggtgtcggacac 46940797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 47989549 - 47989478
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||||||||||||||| ||||| | ||||||| |||||||| | ||||| ||||| |||||||| |||||    
T  47989549 gacacttgtaattacactgaattatgtgatttttttaaattatt-attgtgtcggcgtgtcagtgtctgtgtc 47989478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 40
Target Start/End: Complemental strand, 113398 - 113363
Alignment:
Q  5 cactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||||||||||||||||||||| ||||||    
T  113398 cactcctcggattaggcgtgtcccggtgttggacac 113363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 5944400 - 5944365
Alignment:
Q  4 acactcctcggattaggcgtgtcccggtgtcggaca 39  Q
    |||||||||||||||||||| |||||||||||||||    
T  5944400 acactcctcggattaggcgtatcccggtgtcggaca 5944365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 8117159 - 8117120
Alignment:
Q  1 cagacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||| |||||||||||||||||||||| ||||||||||    
T  8117159 cagacattcctcggattaggcgtgtcccgatgtcggacac 8117120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 18337381 - 18337338
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattatt 79  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||    
T  18337381 gacacttgtaattacactgaattatgtgattttttcaaattatt 18337338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 22515894 - 22515945
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgt 87  Q
    ||||||||||||||||||  ||||| | ||||||||||||||||| ||||||    
T  22515894 gacacttgtaattacactaaattatgtgattttttcaaattattagctgtgt 22515945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 34
Target Start/End: Original strand, 27965952 - 27965983
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtc 34  Q
    ||||||||||||||||||||||||||||||||    
T  27965952 gacactcctcggattaggcgtgtcccggtgtc 27965983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 30359472 - 30359398
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacacttgtaattacactgcattatctaattttttcaaattat 78  Q
    |||||||||| |||| ||||||||||| |||| |||||||| | |||||||  ||||| | |||||||||||||||    
T  30359472 gacactcctcagatttggcgtgtcccgttgtc-gacacttgcagttacactaaattatgtgattttttcaaattat 30359398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 102
Target Start/End: Original strand, 31672905 - 31672968
Alignment:
Q  39 acttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 102  Q
    |||||||||||||||| ||||  | ||||||||||||||||| |||||| || || ||||||||    
T  31672905 acttgtaattacactgaattaagtgattttttcaaattattagctgtgtcggtgtgtcagtgtc 31672968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 40
Target Start/End: Complemental strand, 40181976 - 40181941
Alignment:
Q  5 cactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||||||||||||||||||||| ||||||    
T  40181976 cactcctcggattaggcgtgtcccggtgtaggacac 40181941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 42359456 - 42359527
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgt 107  Q
    ||||||||||||||||||| ||| | | |||||||||||||||||  |||||  |||| |||||||| ||||    
T  42359456 gacacttgtaattacactgaattttgtgattttttcaaattattagatgtgtcagcgtgtcagtgtccgtgt 42359527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 39
Target Start/End: Complemental strand, 1815362 - 1815328
Alignment:
Q  5 cactcctcggattaggcgtgtcccggtgtcggaca 39  Q
    |||||||| ||||||||||||||||||||||||||    
T  1815362 cactcctcagattaggcgtgtcccggtgtcggaca 1815328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 102
Target Start/End: Complemental strand, 9103664 - 9103626
Alignment:
Q  64 attttttcaaattattaactgtgttggcgtatcagtgtc 102  Q
    |||||||||||||||||||||||| ||||| ||||||||    
T  9103664 attttttcaaattattaactgtgtcggcgtgtcagtgtc 9103626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 108
Target Start/End: Original strand, 14359527 - 14359600
Alignment:
Q  34 cggacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||||||||||||||||  ||||| | ||||| ||||||||||| |||||| ||||| || ||||| |||||    
T  14359527 cggacacttgtaattacactaaattatgtgatttt-tcaaattattagctgtgtcggcgtgtccgtgtctgtgtc 14359600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 37
Target Start/End: Original strand, 21366004 - 21366038
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcgga 37  Q
    |||||||||||||||||||||||| ||||||||||    
T  21366004 gacactcctcggattaggcgtgtctcggtgtcgga 21366038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 37
Target Start/End: Original strand, 22515839 - 22515873
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcgga 37  Q
    |||||||||||||||||||||||| ||||||||||    
T  22515839 gacactcctcggattaggcgtgtctcggtgtcgga 22515873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 102
Target Start/End: Original strand, 22794093 - 22794151
Alignment:
Q  44 taattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 102  Q
    ||||||||||| ||||| | ||||||||||||||||| | |||||| ||| ||||||||    
T  22794093 taattacactgtattatgtcattttttcaaattattatccgtgttgacgtgtcagtgtc 22794151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 1704947 - 1704984
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  1704947 gacactccttggattaggcgtgtctcggtgtcggacac 1704984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 5898218 - 5898255
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  5898218 gacactcctcggattagacgtgtcccggtgttggacac 5898255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 6427582 - 6427545
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||| || |||||||||||||||||||||||||||    
T  6427582 gacactcatcagattaggcgtgtcccggtgtcggacac 6427545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 6612112 - 6612149
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||| ||||||||||||||| ||||||||||||    
T  6612112 gacactccttggattaggcgtgtcctggtgtcggacac 6612149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 17831474 - 17831511
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||||||  |||||||||||||||||||||||||||    
T  17831474 gacactcctaagattaggcgtgtcccggtgtcggacac 17831511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 19058863 - 19058920
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgt 93  Q
    ||||||||||||||||||| ||||| | || |||| ||||||||| |||||| |||||    
T  19058863 gacacttgtaattacactgaattatgttatctttttaaattattagctgtgtcggcgt 19058920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 19562567 - 19562604
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||||||||||||||| ||||||| |||||||||||    
T  19562567 gacactcctcggattaggtgtgtccctgtgtcggacac 19562604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 34298513 - 34298444
Alignment:
Q  11 tcggattaggcgtgtcccggtgtcggacacttgtaattacactgcattatctaattttttcaaattatta 80  Q
    ||||| ||||||| || |||||||||| || | ||||||||||| ||||| | ||||| |||||||||||    
T  34298513 tcggaataggcgtatctcggtgtcggatacgtataattacactgaattatgtgattttctcaaattatta 34298444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 37598938 - 37598901
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  37598938 gacactcctcggattaggcgtgtcccattgtcggacac 37598901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 1704999 - 1705043
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattatta 80  Q
    ||||||||||||||| ||| ||||| | |||||||||||||||||    
T  1704999 gacacttgtaattaccctgaattatgtgattttttcaaattatta 1705043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 5898281 - 5898345
Alignment:
Q  44 taattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||||||| ||||| | ||||||||| ||||||| | |||| ||||| |||||||| |||||    
T  5898281 taattacactgaattatgtgattttttcagattattagcggtgtcggcgtctcagtgtctgtgtc 5898345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 8010294 - 8010338
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattatta 80  Q
    ||||||| |||||| |||| ||||| |||||||||||||||||||    
T  8010294 gacacttataattatactgaattatataattttttcaaattatta 8010338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 40
Target Start/End: Original strand, 9690234 - 9690262
Alignment:
Q  12 cggattaggcgtgtcccggtgtcggacac 40  Q
    |||||||||||||||||||||||||||||    
T  9690234 cggattaggcgtgtcccggtgtcggacac 9690262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 16164257 - 16164293
Alignment:
Q  4 acactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  16164257 acactcttcggattaggcgtgtcctggtgtcggacac 16164293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 17778659 - 17778623
Alignment:
Q  4 acactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||| |||||||||||| ||||||||||||||||||    
T  17778659 acacttctcggattaggcatgtcccggtgtcggacac 17778623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 28273095 - 28273139
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattatta 80  Q
    ||||||||||||||||||| ||||| | |||||||||||| ||||    
T  28273095 gacacttgtaattacactgaattatatgattttttcaaatgatta 28273139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 47989615 - 47989579
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggaca 39  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  47989615 gacactcctcggattaggcgtgtcccgatgtcagaca 47989579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 14674358 - 14674249
Alignment:
Q  1 cagacactcctcggattaggcgtgtcccgg--tgtcggacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcag 98  Q
    |||||||||||||||||||| ||||| |||  |||| ||||||||||||||||||  ||||| | ||||||||||||||||| |||||| ||||| ||||    
T  14674358 cagacactcctcggattaggtgtgtctcggcctgtccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcag 14674259  T
Q  99 tgtcagtgtc 108  Q
    |||| |||||    
T  14674258 tgtccgtgtc 14674249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 21576752 - 21576841
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtcc-gtgtctgtgtccgtg 124  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||| ||||||||||||||||||||  |||||| |||||||| ||||||    
T  21576752 gacacttgtaattacactgaattatgtgattttttcaaattattagctgtgttggcgtatcagtgttcgtgtccagtgtctgtatccgtg 21576841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 24906308 - 24906373
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgt 101  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||| |||||||||||| |||||||    
T  24906308 gacacttgtaattacactgaattatgtcattttttcaaattattatctgtgttggcgtgtcagtgt 24906373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 15405027 - 15405106
Alignment:
Q  1 cagacactcctcggattaggcgtgtcccggtgtcggacacttgtaattacactgcattatctaattttttcaaattatta 80  Q
    |||||||||||||||||| || ||||| | ||| ||||||||||||||||| || ||||| | |||||||||||||||||    
T  15405027 cagacactcctcggattaagcatgtcctgatgttggacacttgtaattacattgaattatatgattttttcaaattatta 15405106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 153
Target Start/End: Original strand, 21191063 - 21191181
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgtgt-ctgtgtccgtgt-cgtatctg 133  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||| |||||| ||| | |||||||| |||| ||||| | ||||| |||| |||||  |    
T  21191063 gacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcatgtcagtgtccgtgt-cgtgtccggtgtcagtgtccgtattcg 21191161  T
Q  134 tatccgtatccatgcttcat 153  Q
    ||||||||||| ||||||||    
T  21191162 tatccgtatccgtgcttcat 21191181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 17177030 - 17177096
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 102  Q
    |||||||||||||||| || ||| | | ||||||||||||||||| |||||||||||||||||||||    
T  17177030 gacacttgtaattacaatgaattttttgattttttcaaattattagctgtgttggcgtatcagtgtc 17177096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 39698593 - 39698517
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgtg 112  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||| ||||||  |||| |||||||| || ||||||    
T  39698593 gacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtgtccgtatccgtg 39698517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 31084375 - 31084309
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 102  Q
    |||||||||||||||| || ||||| | ||||||||||||||||| |||||| ||||| ||||||||    
T  31084375 gacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 31084309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 111
Target Start/End: Complemental strand, 43001851 - 43001777
Alignment:
Q  37 acacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgt 111  Q
    |||||||||||||||||| ||||| ||||||||||||||||||| | |||| | | | |||||||| ||||||||    
T  43001851 acacttgtaattacactgaattatgtaattttttcaaattattagcagtgtcgacatgtcagtgtccgtgtccgt 43001777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 6247674 - 6247609
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgt 101  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||  ||||| ||||| |||||||    
T  6247674 gacacttgtaattacactgaattatgtgattttttcaaattattagatgtgtcggcgtgtcagtgt 6247609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 120
Target Start/End: Original strand, 7997173 - 7997258
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtg-tcagtgtccgtgtctgtgtc 120  Q
    ||||||| ||||||||||| ||||| | ||||| ||||||||||| | |||||||||| |||||| || || ||||||||||||||    
T  7997173 gacacttataattacactgtattatatcattttctcaaattattatccgtgttggcgtgtcagtgttcggtatccgtgtctgtgtc 7997258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 17088398 - 17088361
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17088398 gacactcctcggattaggcgtgtcccggtgtcggacac 17088361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 15382592 - 15382556
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggaca 39  Q
    |||||||||||||||||||||||||||||||||||||    
T  15382592 gacactcctcggattaggcgtgtcccggtgtcggaca 15382556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 21522802 - 21522730
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    |||| |||||||||||||| ||||| | ||||||| ||||||||| |||||| ||||| |||||||| |||||    
T  21522802 gacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtc 21522730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 21533368 - 21533296
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    |||| |||||||||||||| ||||| | ||||||| ||||||||| |||||| ||||| |||||||| |||||    
T  21533368 gacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtc 21533296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 19579753 - 19579682
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgt 107  Q
    ||||||||||||| ||||  ||||| | ||||| ||||||||||| |||||| |||||||||||||| ||||    
T  19579753 gacacttgtaattgcactaaattatgtgattttctcaaattattagctgtgtcggcgtatcagtgtccgtgt 19579682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 42893412 - 42893361
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgt 87  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||| ||||||    
T  42893412 gacacttgtaattacactggattatgtgattttttcaaattattagctgtgt 42893361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 38464323 - 38464361
Alignment:
Q  1 cagacactcctcggattaggcgtgtcccggtgtcggaca 39  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  38464323 cagacactcctcggattaggtgtgtcccggtgtcggaca 38464361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 8420079 - 8419990
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgt-cagtgtccgtgtctgtgtccgtg 124  Q
    |||||||||||||||| || ||||| | ||||||||||||||||| || ||| ||||| ||| ||| | ||||||||||| || ||||||    
T  8420079 gacacttgtaattacattgaattatgttattttttcaaattattagctatgtcggcgtgtcattgtccggtgtccgtgtccgtatccgtg 8419990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 14873629 - 14873592
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  14873629 gacactcctcggattaggcgtgtcccggtgttggacac 14873592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 21191008 - 21191045
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||||||||||||||||||||||||| |||||||||    
T  21191008 gacactcctcggattaggcgtgtcccggagtcggacac 21191045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 39268550 - 39268587
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||||||||||||||||||||||| |||||||||||    
T  39268550 gacactcctcggattaggcgtgtcccagtgtcggacac 39268587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 6326304 - 6326376
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||||||||||||||| ||||| ||||||| |||||||| || |  ||| ||||| |||||||| |||||    
T  6326304 gacacttgtaattacactgaattatgtaattttctcaaattactagcgatgtcggcgtgtcagtgtccgtgtc 6326376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 7677819 - 7677787
Alignment:
Q  7 ctcctcggattaggcgtgtcccggtgtcggaca 39  Q
    |||||||||||||||||||||||||||||||||    
T  7677819 ctcctcggattaggcgtgtcccggtgtcggaca 7677787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 13287406 - 13287478
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    |||||||||| |||||||| ||||| | ||||||||||||||||| |||||| | ||| | |||||| |||||    
T  13287406 gacacttgtagttacactgaattatgtgattttttcaaattattatctgtgtcgacgtgttagtgtccgtgtc 13287478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 19552578 - 19552622
Alignment:
Q  64 attttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    |||||||||||||||||||||||| ||||| |||||||| |||||    
T  19552578 attttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtc 19552622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 19820340 - 19820376
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggaca 39  Q
    |||||||||| ||||||||||||||||||||||||||    
T  19820340 gacactcctctgattaggcgtgtcccggtgtcggaca 19820376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 41633787 - 41633736
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgt 87  Q
    |||| |||||||||||||| ||||| ||| ||||||||||||||| ||||||    
T  41633787 gacatttgtaattacactgaattatgtaaatttttcaaattattagctgtgt 41633736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Original strand, 36642799 - 36642841
Alignment:
Q  66 tttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    |||||||||||||||||||||| ||||| |||||||| |||||    
T  36642799 tttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtc 36642841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 37
Target Start/End: Complemental strand, 39698659 - 39698625
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcgga 37  Q
    |||||||||||||||||||||||| ||||||||||    
T  39698659 gacactcctcggattaggcgtgtctcggtgtcgga 39698625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 17593675 - 17593712
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||||||||||||| |||||||||||||| ||||||    
T  17593675 gacactcctcggattaagcgtgtcccggtgttggacac 17593712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 33
Target Start/End: Complemental strand, 19579818 - 19579789
Alignment:
Q  4 acactcctcggattaggcgtgtcccggtgt 33  Q
    ||||||||||||||||||||||||||||||    
T  19579818 acactcctcggattaggcgtgtcccggtgt 19579789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 21576697 - 21576734
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||||||||||||||||||||||| ||||| |||||    
T  21576697 gacactcctcggattaggcgtgtcccagtgtcagacac 21576734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 23015936 - 23015973
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  23015936 gacactcctcggattaggcgtgtcccaatgtcggacac 23015973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 31084435 - 31084398
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  31084435 gacactcctcggattaggcatgtcccagtgtcggacac 31084398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 35017150 - 35017113
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||||||||||||||||||| ||| ||||||    
T  35017150 gacactcctcggattaggcgtgtcccgatgttggacac 35017113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 39342550 - 39342513
Alignment:
Q  2 agacactcctcggattaggcgtgtcccggtgtcggaca 39  Q
    |||||||||| |||||||||||||||||||||| ||||    
T  39342550 agacactccttggattaggcgtgtcccggtgtctgaca 39342513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 43564988 - 43564951
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||| ||||||||||||||||||||| |||||||||    
T  43564988 gacacttctcggattaggcgtgtcccggcgtcggacac 43564951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 2437017 - 2436981
Alignment:
Q  4 acactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||||||||||||||||||||  ||||||||||||    
T  2437017 acactcctcggattaggcgtgtcttggtgtcggacac 2436981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 15410390 - 15410430
Alignment:
Q  4 acactcctcggattaggcgtgtcccggtgtcggacacttgt 44  Q
    ||||||||||| |||| ||||||||||||| ||||||||||    
T  15410390 acactcctcggcttagacgtgtcccggtgttggacacttgt 15410430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 17123154 - 17123119
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggaca 39  Q
    |||||||||||||||||||||||||| ||||||||||    
T  17123154 gacactcctcggattaggcgtgtccc-gtgtcggaca 17123119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 21194075 - 21194111
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggaca 39  Q
    |||||||||||||||||||||| ||||||||| ||||    
T  21194075 gacactcctcggattaggcgtgccccggtgtctgaca 21194111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 27932282 - 27932230
Alignment:
Q  41 ttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgt 93  Q
    |||||||||||||| ||||| ||||||| ||||||||||| | |||| |||||    
T  27932282 ttgtaattacactgaattatgtaattttctcaaattattagcggtgtcggcgt 27932230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 37328851 - 37328923
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||| ||||||||||||| ||| | | |||||| |||||||||  |||||| || ||||||||||| |||||    
T  37328851 gacacatgtaattacactgaattttgtgatttttacaaattatttgctgtgtcggtgtatcagtgtccgtgtc 37328923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 6e-21; HSPs: 56)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 36 - 123
Target Start/End: Complemental strand, 12696376 - 12696290
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgtgtctgtgtccgt 123  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||| |||||| ||||| |||||||| |||| |||||| ||||||||    
T  12696376 gacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgt-cgtgtccgtgtccgt 12696290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 7977837 - 7977900
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagt 99  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||| |||||| ||||| |||||    
T  7977837 gacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagt 7977900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 108
Target Start/End: Original strand, 426490 - 426593
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 102  Q
    |||||||||| ||||||||||||||  |   | |||||||||||||||| |  ||||| | |||||||||||||||||||||||| ||||| ||||||||    
T  426490 gacactcctcagattaggcgtgtcc--gacaccgacacttgtaattacatttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtc 426587  T
Q  103 agtgtc 108  Q
     |||||    
T  426588 cgtgtc 426593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 7938207 - 7938102
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac------ttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatc 96  Q
    |||||||||||||| ||||||||| |||||||||||||      || ||||||||||  ||||| | ||||||||||||||||| |||||| ||||| ||    
T  7938207 gacactcctcggatcaggcgtgtctcggtgtcggacaccgacacttataattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtc 7938108  T
Q  97 agtgtc 102  Q
    ||||||    
T  7938107 agtgtc 7938102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 10770681 - 10770747
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 102  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||  ||||||||||| ||||||||    
T  10770681 gacacttgtaattacactgaattatgtgattttttcaaattattagttgtgttggcgtgtcagtgtc 10770747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 16766749 - 16766683
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 102  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||| |||||| ||||| ||||||||    
T  16766749 gacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 16766683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 17341634 - 17341735
Alignment:
Q  4 acactcctcggattaggcgtgtcccgg-----tgtcggacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcag 98  Q
    |||||||||||||||||||||||| ||     |||| ||||||| ||||||||||| ||||| | ||||| ||||||||||||| |||| ||||| ||||    
T  17341634 acactcctcggattaggcgtgtcctggtattatgtctgacacttataattacactgaattatgtgattttatcaaattattaacggtgtcggcgtgtcag 17341733  T
Q  99 tg 100  Q
    ||    
T  17341734 tg 17341735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 38 - 111
Target Start/End: Original strand, 17841598 - 17841671
Alignment:
Q  38 cacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgt 111  Q
    ||||||||||||||||  ||||| | ||||||||||||||||| |||||| ||||| |||||||| ||||||||    
T  17841598 cacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgt 17841671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 31959211 - 31959146
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgt 101  Q
    ||||||||||||||||||||||||| | ||||||||||||||||| |||||  ||||| |||||||    
T  31959211 gacacttgtaattacactgcattatgtgattttttcaaattattagctgtgacggcgtgtcagtgt 31959146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 37 - 108
Target Start/End: Complemental strand, 17435250 - 17435179
Alignment:
Q  37 acacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    |||||||||||||||||| ||||| ||||||||| ||||||||| || ||| | |||||||||||| |||||    
T  17435250 acacttgtaattacactgaattatgtaattttttaaaattattagctatgtcgacgtatcagtgtccgtgtc 17435179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 9107377 - 9107449
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||||||||||||||| ||| | | ||||||||||||||||| |||||| ||||| | |||||| |||||    
T  9107377 gacacttgtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtc 9107449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 16833360 - 16833288
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||||||||||||||| | ||| | |||||||||||||||||  ||||| ||||| |||||||| |||||    
T  16833360 gacacttgtaattacactgaagtatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtctgtgtc 16833288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 25207846 - 25207757
Alignment:
Q  4 acactcctcggattaggcgtgtcccggtgtcggacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtat 95  Q
    |||||||||  |||||||||||||||||||||||||||  |||||| |||| ||||  ||| ||| ||||||||||| | |||| |||||||    
T  25207846 acactcctcatattaggcgtgtcccggtgtcggacact--taattatactgaattacgtaactttctcaaattattagcggtgtcggcgtat 25207757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 34595186 - 34595114
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||  ||||| ||||| ||| |||| |||||    
T  34595186 gacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcattgtccgtgtc 34595114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 1191707 - 1191796
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttg--gcgtatcagtgtcagtgtccgtgtctgtgtccgtg 124  Q
    ||||||||||||||||||| ||| | | | ||||||||||||||| |||||| |  |||| || ||||||||||||||||| |||||||||    
T  1191707 gacacttgtaattacactgaattttgtgaatttttcaaattattagctgtgtcggcgcgtgtccgtgtcagtgtccgtgtc-gtgtccgtg 1191796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 123
Target Start/End: Original strand, 5970120 - 5970202
Alignment:
Q  41 ttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtcc-gtgtctgtgtccgt 123  Q
    |||||||||||||| ||||| | |||||||||||||||||||||||| | ||| || |||||| ||||| ||||| ||||||||    
T  5970120 ttgtaattacactgaattatgtgattttttcaaattattaactgtgtcgacgtgtccgtgtca-tgtccggtgtccgtgtccgt 5970202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 6327525 - 6327572
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaact 83  Q
    ||||||||||||||||||  ||||| ||||||||||||||||||||||    
T  6327525 gacacttgtaattacacttaattatataattttttcaaattattaact 6327572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 108
Target Start/End: Original strand, 8776981 - 8777052
Alignment:
Q  37 acacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    |||||||||||||||||| ||| | | |||||||||||||||||  ||||| ||||| |||||||| |||||    
T  8776981 acacttgtaattacactgaattttgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtc 8777052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 123
Target Start/End: Original strand, 31429015 - 31429097
Alignment:
Q  41 ttgtaattacactgcattatctaattttttc-aaattattaactgtgttggcgtatcagtgtcagtgtccgtgtctgtgtccgt 123  Q
    |||||||||||||| ||||| | |||||||  ||||||||| ||| || ||||| |||||||||||||||||||||| ||||||    
T  31429015 ttgtaattacactgaattatgtgattttttttaaattattagctgggt-ggcgtgtcagtgtcagtgtccgtgtctgggtccgt 31429097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 7801132 - 7801220
Alignment:
Q  4 acactcctcggattaggcgtgtcccggtgtcggacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgt 93  Q
    |||||| |||||||||||||||||||    || |||||||||||||| ||| ||||| | |||||||||||||||||  ||||| |||||    
T  7801132 acactcttcggattaggcgtgtcccgacaccg-acacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggcgt 7801220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 8389420 - 8389457
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||||||||||||||| |||||||||||||||||||    
T  8389420 gacactcctcggattaggtgtgtcccggtgtcggacac 8389457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 9025457 - 9025494
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||| |||||||||||||||||||||||||||||||    
T  9025457 gacacttctcggattaggcgtgtcccggtgtcggacac 9025494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 109
Target Start/End: Complemental strand, 28152150 - 28152078
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtcc 109  Q
    ||||||||||||||||||| ||||| | |||||| |||||||||| || ||| ||||| |||||||| ||||||    
T  28152150 gacacttgtaattacactgaattatgtgattttt-caaattattagctttgtcggcgtgtcagtgtccgtgtcc 28152078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 31959257 - 31959220
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||||||||||||||| |||||||||||||||||||    
T  31959257 gacactcctcggattaggtgtgtcccggtgtcggacac 31959220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 8365526 - 8365598
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||||||||||||| | ||||| | || ||||||||||||||  ||||| ||||| |||||||| |||||    
T  8365526 gacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtccgtgtc 8365598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 23771630 - 23771559
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    |||| |||||||||||||| | ||| ||||||||| |||||||||||||||| ||||| || ||||| |||||    
T  23771630 gacatttgtaattacactgaagtatataatttttt-aaattattaactgtgtcggcgtgtccgtgtccgtgtc 23771559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 28152204 - 28152168
Alignment:
Q  4 acactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||||||||||||||| ||||||||||||||||||    
T  28152204 acactcctcggattaggcctgtcccggtgtcggacac 28152168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 28715347 - 28715303
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattatta 80  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||    
T  28715347 gacacttgtaattacactgaattatgtcattttttcaaattatta 28715303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 31384972 - 31384928
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattatta 80  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||    
T  31384972 gacacttgtaattacactgaattatgtgattttttcaaattatta 31384928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 40
Target Start/End: Original strand, 9107313 - 9107348
Alignment:
Q  5 cactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||||||||||||| |||||||||||||||||||    
T  9107313 cactcctcggattaggtgtgtcccggtgtcggacac 9107348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 3209505 - 3209471
Alignment:
Q  4 acactcctcggattaggcgtgtcccggtgtcggac 38  Q
    |||||||||||||||||||||||| ||||||||||    
T  3209505 acactcctcggattaggcgtgtccgggtgtcggac 3209471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 102
Target Start/End: Original strand, 7265608 - 7265666
Alignment:
Q  44 taattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 102  Q
    ||||||||||| ||||| | ||||| ||||||||||| | |||||||||| ||||||||    
T  7265608 taattacactgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtc 7265666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 90
Target Start/End: Original strand, 7569183 - 7569229
Alignment:
Q  44 taattacactgcattatctaattttttcaaattattaactgtgttgg 90  Q
    ||||||||||| ||||| ||||||| ||||||||||| |||||||||    
T  7569183 taattacactgaattatgtaattttctcaaattattatctgtgttgg 7569229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 40
Target Start/End: Original strand, 8365463 - 8365497
Alignment:
Q  6 actcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||||||||||||||| |||||||||||    
T  8365463 actcctcggattaggcgtgtcccagtgtcggacac 8365497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 102
Target Start/End: Original strand, 12868710 - 12868748
Alignment:
Q  64 attttttcaaattattaactgtgttggcgtatcagtgtc 102  Q
    |||||||||||||||||||||||| ||||| ||||||||    
T  12868710 attttttcaaattattaactgtgtcggcgtgtcagtgtc 12868748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 40
Target Start/End: Original strand, 21924902 - 21924940
Alignment:
Q  2 agacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  21924902 agacgctcctcggattaggcgtgtcccggtgtccgacac 21924940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 1681810 - 1681753
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgt 93  Q
    ||||||||||||||||||| ||||  | |||||||||||||||||  ||||| |||||    
T  1681810 gacacttgtaattacactgaattacgtgattttttcaaattattagttgtgtcggcgt 1681753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 108
Target Start/End: Complemental strand, 3398667 - 3398599
Alignment:
Q  39 acttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    |||| ||||||||||| ||||| | |||||| |||||||||| |||||| ||||| |||||||| |||||    
T  3398667 acttataattacactgaattatatgattttt-caaattattagctgtgtcggcgtgtcagtgtccgtgtc 3398599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 6349745 - 6349810
Alignment:
Q  37 acacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 102  Q
    |||| |||||||||| || ||||| |||||||||||||||||||| | ||| ||| ||||| ||||    
T  6349745 acacatgtaattacaatgaattatgtaattttttcaaattattaattatgtcggcatatcaatgtc 6349810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 7248476 - 7248439
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  7248476 gacactcctcggatttgacgtgtcccggtgtcggacac 7248439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 8776920 - 8776957
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  8776920 gacactcctcggattaggtgtgtctcggtgtcggacac 8776957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 40
Target Start/End: Complemental strand, 16766807 - 16766778
Alignment:
Q  11 tcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||||||||||||||||||||||    
T  16766807 tcggattaggcgtgtcccggtgtcggacac 16766778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 17327602 - 17327639
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||||||||||||||||||||||| ||||| |||||    
T  17327602 gacactcctcggattaggcgtgtccctgtgtcagacac 17327639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 17841541 - 17841578
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||||||||||||||||||||| | |||||||||||    
T  17841541 gacactcctcggattaggcgtgtctcagtgtcggacac 17841578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 26178628 - 26178661
Alignment:
Q  1 cagacactcctcggattaggcgtgtcccggtgtc 34  Q
    |||||||||||| |||||||||||||||||||||    
T  26178628 cagacactcctccgattaggcgtgtcccggtgtc 26178661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 31385037 - 31385000
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||| ||||||||||||||||||||| ||||||    
T  31385037 gacactccttggattaggcgtgtcccggtgtaggacac 31385000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 34595241 - 34595204
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  34595241 gacactcctcggattaggtgtgtcccggtgtcagacac 34595204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 6898288 - 6898332
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattatta 80  Q
    ||||||||||||||||||  ||||| |||||| ||||||||||||    
T  6898288 gacacttgtaattacacttaattatgtaatttgttcaaattatta 6898332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 7930407 - 7930371
Alignment:
Q  4 acactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  7930407 acactcctcgaattaggcgtgtcctggtgtcggacac 7930371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 9027273 - 9027237
Alignment:
Q  4 acactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||||| ||||||| ||||||||||||||||||||    
T  9027273 acactccttggattagccgtgtcccggtgtcggacac 9027237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 9522943 - 9522899
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattatta 80  Q
    ||||||||||||||||||| ||||| | ||||||| |||||||||    
T  9522943 gacacttgtaattacactgaattatgtgatttttttaaattatta 9522899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 9658923 - 9658848
Alignment:
Q  44 taattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgtgtctgtgtc 120  Q
    ||||||||||| ||||| | ||||| | ||||||||| | |||| ||||| |||||||| |||| ||||||||||||    
T  9658923 taattacactgaattatgtgattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgt-cgtgtctgtgtc 9658848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 10339066 - 10339102
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggaca 39  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  10339066 gacactcctccgattaggcgtgtcccagtgtcggaca 10339102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 114
Target Start/End: Complemental strand, 10842574 - 10842506
Alignment:
Q  46 attacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgtgtc 114  Q
    ||||||||  ||||| | ||||||||||||||||| | |||| ||||| || |||||| ||||||||||    
T  10842574 attacactaaattatgtgattttttcaaattattagcggtgtcggcgtgtccgtgtcaatgtccgtgtc 10842506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 15489739 - 15489783
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattatta 80  Q
    |||||||||||||||| || ||| | |||||||||||||||||||    
T  15489739 gacacttgtaattacattgaattgtgtaattttttcaaattatta 15489783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 32978851 - 32978887
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggaca 39  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  32978851 gacactccttggattagacgtgtcccggtgtcggaca 32978887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 2e-20; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 11596360 - 11596442
Alignment:
Q  37 acacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc-agtgtccgtgtctgtg 118  Q
    |||||||||||||||||| ||||| | ||||||||||||||||| || ||||||||||||||||||  |||||||||||||||    
T  11596360 acacttgtaattacactgaattatgtgattttttcaaattattagctttgttggcgtatcagtgtctggtgtccgtgtctgtg 11596442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 30298999 - 30298916
Alignment:
Q  36 gacacttgtaattacactgcattatctaatttttt-caaattattaactgtgttggcgtatcagtgtcagtgtccgtgtctgtg 118  Q
    ||||||||||||||||||| ||||| | ||||||| |||||||||| |||||| ||||| |||||||| |||||||| ||||||    
T  30298999 gacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgtatctgtg 30298916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 30327867 - 30327784
Alignment:
Q  36 gacacttgtaattacactgcattatctaatttttt-caaattattaactgtgttggcgtatcagtgtcagtgtccgtgtctgtg 118  Q
    ||||||||||||||||||| ||||| | ||||||| |||||||||| |||||| ||||| |||||||| |||||||| ||||||    
T  30327867 gacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgtatctgtg 30327784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 21945555 - 21945483
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||| |||||| ||| | |||||||| |||||    
T  21945555 gacacttgtaattacactgaattatgtcattttttcaaattattagctgtgtcggcatgtcagtgtctgtgtc 21945483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 125
Target Start/End: Original strand, 22440569 - 22440695
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcgga-----cacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatca 97  Q
    |||||||||||||||||||||||||  ||||||||     ||| | ||||||||||| ||||| | ||||| ||||||||||||| |||| |  ||||||    
T  22440569 gacactcctcggattaggcgtgtcctagtgtcggacacgtcacatataattacactgaattatgtgattttctcaaattattaacggtgtcgatgtatca 22440668  T
Q  98 gtgtcagtgtccgtgtctgtgtccgtgt 125  Q
    |||||  ||| ||||||||| |||||||    
T  22440669 gtgtccatgt-cgtgtctgtatccgtgt 22440695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 34306811 - 34306876
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 102  Q
    |||||||||||||||||| |||||||| | |||||||||||||||  ||||| ||||||||||||||    
T  34306811 gacacttgtaattacactacattatctga-tttttcaaattattagttgtgtcggcgtatcagtgtc 34306876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 23292938 - 23292975
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  23292938 gacactcctcggattaggcgtgtcccggtgtcggacac 23292975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 23292993 - 23293065
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    |||||||||||||| |||| ||||| | ||||||||||||||||| |||||| ||||| ||| |||| |||||    
T  23292993 gacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtc 23293065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 90
Target Start/End: Complemental strand, 29205496 - 29205442
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttgg 90  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||| | |||||||    
T  29205496 gacacttgtaattacactgaattatgtgattttttcaaattattagccgtgttgg 29205442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 51701309 - 51701259
Alignment:
Q  37 acacttgtaattacactgcattatctaattttttcaaattattaactgtgt 87  Q
    |||||||||||||||||  ||||| ||||||||||||||||||| ||||||    
T  51701309 acacttgtaattacactcaattatgtaattttttcaaattattagctgtgt 51701259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 28084631 - 28084594
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||||||||||||||||||||||| |||||||||||    
T  28084631 gacactcctcggattaggcgtgtcccagtgtcggacac 28084594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 715557 - 715593
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggaca 39  Q
    |||||||||||||||||||||||||| ||||||||||    
T  715557 gacactcctcggattaggcgtgtccctgtgtcggaca 715593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 752883 - 752919
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggaca 39  Q
    |||||||||||||||||||||||||| ||||||||||    
T  752883 gacactcctcggattaggcgtgtccctgtgtcggaca 752919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 2361982 - 2362054
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||| ||||||||||  ||||| ||||||||||||||||||| |||||| || || ||| ||||| ||||    
T  2361982 gacacttttaattacactaaattatgtaattttttcaaattattagctgtgtcggtgtgtcaatgtcaatgtc 2362054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 108
Target Start/End: Original strand, 12628620 - 12628664
Alignment:
Q  64 attttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    |||||||||||||||||||||||| ||| | ||||||||||||||    
T  12628620 attttttcaaattattaactgtgtcggcatgtcagtgtcagtgtc 12628664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 28964255 - 28964299
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattatta 80  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||    
T  28964255 gacacttgtaattacactgaattatgtgattttttcaaattatta 28964299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 3947773 - 3947824
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgt 87  Q
    ||||||||||||||||||| |||||   ||||||||||||||||| ||||||    
T  3947773 gacacttgtaattacactgaattatgcgattttttcaaattattagctgtgt 3947824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 16184937 - 16184902
Alignment:
Q  4 acactcctcggattaggcgtgtcccggtgtcggaca 39  Q
    ||||||||||||||||||||||||| ||||||||||    
T  16184937 acactcctcggattaggcgtgtcccagtgtcggaca 16184902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 108
Target Start/End: Complemental strand, 19482719 - 19482648
Alignment:
Q  37 acacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    |||||||||||||||| | ||||| | || ||||||||||||||  ||||| ||||| |||||||| |||||    
T  19482719 acacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtctgtgtc 19482648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 29205574 - 29205539
Alignment:
Q  4 acactcctcggattaggcgtgtcccggtgtcggaca 39  Q
    ||||||||||||||||||||||||| ||||||||||    
T  29205574 acactcctcggattaggcgtgtcccagtgtcggaca 29205539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 38847019 - 38847070
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgt 87  Q
    ||||||||||||||||||| || || | ||||||||||||||||| ||||||    
T  38847019 gacacttgtaattacactgaataatatgattttttcaaattattagctgtgt 38847070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 108
Target Start/End: Complemental strand, 40481687 - 40481617
Alignment:
Q  37 acacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    |||||||||||||||||| ||||| | |||||| ||||||||||  ||| | ||||| ||||||||||||||    
T  40481687 acacttgtaattacactgaattatgtgattttt-caaattattagttgtatcggcgtgtcagtgtcagtgtc 40481617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 12895123 - 12895204
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgtgtctgtg 118  Q
    |||||||||||||||  || ||||| | ||||||||||||||||| |||| | ||||| || ||||| |||||||| ||||||    
T  12895123 gacacttgtaattactttgaattatgtgattttttcaaattattagctgtttcggcgtgtc-gtgtccgtgtccgtatctgtg 12895204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 119
Target Start/End: Original strand, 14465088 - 14465166
Alignment:
Q  42 tgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtcc-gtgtctgtgt 119  Q
    |||||||||| || ||||| | |||||||||||||||||  |||||| | || |||||||| |||||| ||||||||||    
T  14465088 tgtaattacattgaattatgtgattttttcaaattattaggtgtgttagagtgtcagtgtctgtgtccggtgtctgtgt 14465166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 16303273 - 16303339
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 102  Q
    ||||||||||||||||||  ||||| | ||||||||||| ||||| || ||| ||||| ||||||||    
T  16303273 gacacttgtaattacactaaattatatcattttttcaaaatattatctttgtcggcgtgtcagtgtc 16303339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 126
Target Start/End: Original strand, 27706185 - 27706274
Alignment:
Q  37 acacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgtgtct-gtgtccgtgtc 126  Q
    |||||||||||||||||  ||||| | ||||||| |||||||||| ||||| | ||| ||||||||  ||| ||||||| |||||||||||    
T  27706185 acacttgtaattacactaaattatgtgatttttttaaattattaattgtgtcgacgtgtcagtgtccctgt-cgtgtctggtgtccgtgtc 27706274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 37
Target Start/End: Original strand, 28964200 - 28964234
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcgga 37  Q
    |||||||||||||||||||||||||| ||||||||    
T  28964200 gacactcctcggattaggcgtgtcccagtgtcgga 28964234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 37
Target Start/End: Original strand, 53381542 - 53381576
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcgga 37  Q
    |||||||||||||||||| ||||||||||||||||    
T  53381542 gacactcctcggattaggtgtgtcccggtgtcgga 53381576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 3712465 - 3712502
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  3712465 gacactcctcagattagccgtgtcccggtgtcggacac 3712502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 3947713 - 3947750
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||||||||||||||| |||||| ||||||||||||    
T  3947713 gacactcctcggattaggtgtgtcctggtgtcggacac 3947750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 5922542 - 5922579
Alignment:
Q  2 agacactcctcggattaggcgtgtcccggtgtcggaca 39  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  5922542 agacactcctcagattaggcgtgtcccagtgtcggaca 5922579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 6485618 - 6485663
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaa 81  Q
    ||||||||||||||||||  ||||| | ||||||||||||||||||    
T  6485618 gacacttgtaattacactaaattatgtgattttttcaaattattaa 6485663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 12895227 - 12895260
Alignment:
Q  4 acactcctcggattaggcgtgtcccggtgtcgga 37  Q
    |||||||||||||||||||||||||| |||||||    
T  12895227 acactcctcggattaggcgtgtcccgatgtcgga 12895260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 18513187 - 18513224
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||||||| |||||||||||||| ||||||||||||    
T  18513187 gacactcctcagattaggcgtgtcctggtgtcggacac 18513224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 21945611 - 21945574
Alignment:
Q  2 agacactcctcggattaggcgtgtcccggtgtcggaca 39  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  21945611 agacactcctcggattaggcgtgttgcggtgtcggaca 21945574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 24343620 - 24343583
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||||||| || ||||||||||||||||||||||||    
T  24343620 gacactcctcagaataggcgtgtcccggtgtcggacac 24343583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 30094120 - 30094083
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  30094120 gacactcttcggattaggcgtgtcccggtgtccgacac 30094083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 30982819 - 30982856
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||| | ||||||||||||||||||||||||||||    
T  30982819 gacactctttggattaggcgtgtcccggtgtcggacac 30982856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 32910670 - 32910633
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  32910670 gacactcctcggattaggcgtgtcatggtgtcggacac 32910633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 49431078 - 49430990
Alignment:
Q  36 gacacttgtaattacactgcattatctaatttttt-caaattattaactgtgttggcgtatcagtgtcagtgtccgtgtctgtgtccgtg 124  Q
    ||||||| ||||||||||| ||||| | ||||||| |||||||||| |||||| ||||| ||| |||| | || |||||| |||||||||    
T  49431078 gacacttttaattacactgaattatgtgatttttttcaaattattagctgtgtcggcgtgtcactgtccgagt-cgtgtccgtgtccgtg 49430990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 49431133 - 49431096
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||||||||||| |||||||||||||||| ||||||    
T  49431133 gacactcctcggataaggcgtgtcccggtgttggacac 49431096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 8423670 - 8423706
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggaca 39  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  8423670 gacacttctccgattaggcgtgtcccggtgtcggaca 8423706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 14126118 - 14126190
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||| ||||||||||| ||||| | | ||| ||||||||||||| |||| ||||| | |||||| |||||    
T  14126118 gacacttataattacactgaattatgtgactttatcaaattattaacagtgtcggcgtgttagtgtctgtgtc 14126190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 19482785 - 19482749
Alignment:
Q  4 acactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  19482785 acactcctcggattaggtgtgtcccagtgtcggacac 19482749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 21873315 - 21873351
Alignment:
Q  4 acactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||||| ||||||| ||||||||||||||||||||    
T  21873315 acactccttggattagacgtgtcccggtgtcggacac 21873351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 21929176 - 21929212
Alignment:
Q  4 acactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||||| ||||||| ||||||||||||||||||||    
T  21929176 acactccttggattagacgtgtcccggtgtcggacac 21929212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 54580030 - 54580074
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattatta 80  Q
    ||||||| ||||||||||| ||||| | |||||||||||||||||    
T  54580030 gacacttataattacactgaattatgtgattttttcaaattatta 54580074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 2e-20; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 25775561 - 25775471
Alignment:
Q  36 gacacttgtaattacactgcattatctaatt-ttttcaaattattaactgtgttggcgtatcagtgt-cagtgtccgtgtctgtgtccgtg 124  Q
    ||||||||||||||||||| ||||| | ||| ||||||||||||||| ||||||||||| ||||||| |||||||||||||||| ||||||    
T  25775561 gacacttgtaattacactgaattatgtgattattttcaaattattaaatgtgttggcgtgtcagtgtccagtgtccgtgtctgtctccgtg 25775471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 10268493 - 10268559
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 102  Q
    ||||||||||||||||||  ||||| | |||||||||||||||||||||||| ||||| ||||||||    
T  10268493 gacacttgtaattacactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtc 10268559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 3610685 - 3610613
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    |||||| ||||||||||||  |||| | ||||||| |||||||||||||||||||||| |||||||| |||||    
T  3610685 gacactggtaattacactgagttatgttatttttttaaattattaactgtgttggcgtgtcagtgtctgtgtc 3610613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 4987299 - 4987363
Alignment:
Q  37 acacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgt 101  Q
    |||||||||||||||||| ||||| | ||||||||||||||||| |||||| ||||| |||||||    
T  4987299 acacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 4987363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 15796301 - 15796373
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    |||| |||||||||||||| ||||| | |||||||||||||||||||||||| ||||| ||| |||| |||||    
T  15796301 gacaattgtaattacactgaattatatgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtc 15796373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 55401127 - 55401055
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||||||||||||||  ||||| | |||||||||||||||||  ||||| |||||||||||||| |||||    
T  55401127 gacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtatcagtgtccgtgtc 55401055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 4987232 - 4987269
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  4987232 gacactcctcggattaggcgtgtcccggtgtcggacac 4987269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 34185064 - 34185101
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  34185064 gacactcctcggattaggcgtgtcccggtgtcggacac 34185101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 122
Target Start/End: Complemental strand, 14216946 - 14216859
Alignment:
Q  34 cggacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgtgtctgtgtccg 122  Q
    ||||||||||||||||||||| ||||| | || |||| |||||||||  ||||| | ||| |||||||| |||| ||||||||||||||    
T  14216946 cggacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtccgtgt-cgtgtctgtgtccg 14216859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 122
Target Start/End: Complemental strand, 14223075 - 14222988
Alignment:
Q  34 cggacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgtgtctgtgtccg 122  Q
    ||||||||||||||||||||| ||||| | || |||| |||||||||  ||||| | ||| |||||||| |||| ||||||||||||||    
T  14223075 cggacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtccgtgt-cgtgtctgtgtccg 14222988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 21256960 - 21257044
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacacttgtaattacactgcattatctaattttttcaaattattaactgtgt 87  Q
    |||||||||||||||||| ||||||  |   | |||||||||||||| |||| ||||| | ||||||||||||||||| ||||||    
T  21256960 gacactcctcggattaggtgtgtccacgataccgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgt 21257044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 123
Target Start/End: Complemental strand, 21479170 - 21479083
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtcc-gtgtctgtgtccgt 123  Q
    |||||| |||||||||||| ||| | | ||||||||||||||||| |||||| ||||| |||||||| |||||| ||||| ||||||||    
T  21479170 gacactagtaattacactgaattgtgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc-gtgtccggtgtccgtgtccgt 21479083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 28918053 - 28917981
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||| || ||| ||||| ||||| || |||||    
T  28918053 gacacttgtaattacactgaattatgtgattttttcaaattattagctatgtcggcgtgtcagtttccgtgtc 28917981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 40052418 - 40052382
Alignment:
Q  4 acactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||||||||||||||||||||||||||||||||||    
T  40052418 acactcctcggattaggcgtgtcccggtgtcggacac 40052382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 40993287 - 40993323
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggaca 39  Q
    |||||||||||||||||||||||||||||||||||||    
T  40993287 gacactcctcggattaggcgtgtcccggtgtcggaca 40993323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 125
Target Start/End: Complemental strand, 11658903 - 11658779
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcg---gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagt 99  Q
    ||||||||||| ||||| |||||||||||||||   ||||| | |||| |||||| |||||   ||||| |||||||||||||  |||||| || |||||    
T  11658903 gacactcctcgaattagacgtgtcccggtgtcgatcgacacatataatcacactgaattatgcgattttctcaaattattaacgatgttggtgtgtcagt 11658804  T
Q  100 gtcagtgtccgtgtctgtgtccgtgt 125  Q
    ||| |||| |||||| ||||| ||||    
T  11658803 gtctgtgt-cgtgtccgtgtctgtgt 11658779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 111
Target Start/End: Complemental strand, 20503517 - 20503443
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgt 111  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||   ||||| ||||| |||||||| ||||||||    
T  20503517 gacacttgtaattacactgaattatgtcattttttcaaattatttgttgtgtcggcgtgtcagtgtc-gtgtccgt 20503443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 26508162 - 26508111
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgt 87  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||| ||||||    
T  26508162 gacacttgtaattacactgaattatgtgattttttcaaattattagctgtgt 26508111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 110
Target Start/End: Complemental strand, 10955004 - 10954930
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccg 110  Q
    ||||||||| ||||||||| ||||| | |||||||||||||||||  ||||| ||||| |||||||  |||||||    
T  10955004 gacacttgtgattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgttcgtgtccg 10954930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 114
Target Start/End: Complemental strand, 55213015 - 55212937
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgtgtc 114  Q
    ||||||||||||| ||||  ||||| | ||||||| |||||||||||||||| ||| ||||| |||| ||||| |||||    
T  55213015 gacacttgtaattgcactaaattatgtgattttttaaaattattaactgtgtcggcatatcactgtctgtgtcagtgtc 55212937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 15999962 - 15999999
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  15999962 gacactccttggattaggcgtgtcccggtgtcggacac 15999999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 108
Target Start/End: Original strand, 26492215 - 26492284
Alignment:
Q  39 acttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    |||||||||||||||| ||| | | ||||||||||||||||| || ||| ||||| |||||||| |||||    
T  26492215 acttgtaattacactgaattgtatgattttttcaaattattagctctgtcggcgtgtcagtgtccgtgtc 26492284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 27505358 - 27505321
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  27505358 gacactcctcggattaggcatgtcccggtgtcggacac 27505321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 55401182 - 55401145
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||||||||||||||||||||| |||||||||||||    
T  55401182 gacactcctcggattaggcgtgtctcggtgtcggacac 55401145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 8587028 - 8587100
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||||||||||||||  ||||| | |||||||||||||| ||  ||||| ||||| |||||||| |||||    
T  8587028 gacacttgtaattacacttaattatgtgattttttcaaattactagatgtgtcggcgtgtcagtgtccgtgtc 8587100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 114
Target Start/End: Original strand, 10318071 - 10318119
Alignment:
Q  66 tttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgtgtc 114  Q
    ||||||||||||||| |||||| ||||| |||||||| |||||||||||    
T  10318071 tttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgtgtc 10318119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 20503572 - 20503536
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggaca 39  Q
    |||||||||||||||||||||||||||||||| ||||    
T  20503572 gacactcctcggattaggcgtgtcccggtgtcagaca 20503536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 24205048 - 24205120
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||| ||||||||||| ||||| | ||||| ||||||||||| | |||| ||||| |||||||| |||||    
T  24205048 gacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtc 24205120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 25775613 - 25775577
Alignment:
Q  4 acactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||||||||||||||||||||| ||||||||||||    
T  25775613 acactcctcggattaggcgtgtcctggtgtcggacac 25775577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 35312106 - 35312034
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||||||||||||||| ||||| |||  |||| |||||||||| ||||| | | |||||||||| |||||    
T  35312106 gacacttgtaattacactgaattatgtaacatttttaaattattaaatgtgtcgacatatcagtgtccgtgtc 35312034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 1509591 - 1509540
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgt 87  Q
    ||||||||||||||||||  ||||| | ||||||||||||||||| ||||||    
T  1509591 gacacttgtaattacactaaattatgtgattttttcaaattattagctgtgt 1509540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 11610616 - 11610510
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcg----------gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcg 92  Q
    |||||||||| |||||||||||||||| |||||          ||||||||||| ||||||| ||||| | ||||||| ||||||||| | |||||||||    
T  11610616 gacactcctcagattaggcgtgtcccgatgtcggacacgacttgacacttgtaactacactgaattatgtgatttttttaaattattagcggtgttggcg 11610517  T
Q  93 tatcagt 99  Q
    | |||||    
T  11610516 tgtcagt 11610510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 14979256 - 14979176
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgt 93  Q
    |||||||||||| |||||||||||||||||||          |||||||||| ||||| | ||||||||||||||||| |||||| |||||    
T  14979256 gacactcctcgggttaggcgtgtcccggtgtc----------aattacactgaattatgtgattttttcaaattattagctgtgtcggcgt 14979176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 21720881 - 21720842
Alignment:
Q  1 cagacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||| ||||||||| ||||||||||||||||||||    
T  21720881 cagacactcatcggattagacgtgtcccggtgtcggacac 21720842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 51206360 - 51206411
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgt 87  Q
    |||||||||| |||||||| ||||| | ||||||||||||||||| ||||||    
T  51206360 gacacttgtatttacactgaattatgtgattttttcaaattattagctgtgt 51206411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 1509674 - 1509636
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacact 41  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  1509674 gacactcctccgattaggcgtgtaccggtgtcggacact 1509636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 40
Target Start/End: Complemental strand, 10955056 - 10955022
Alignment:
Q  6 actcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||||||||||||||| |||||||||||    
T  10955056 actcctcggattaggcgtgtcccagtgtcggacac 10955022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 12083992 - 12083911
Alignment:
Q  1 cagacactcctcggattaggcgtgtcccggtgtcg--gacacttgtaattacactgcattatctaattttttcaaattatta 80  Q
    |||||||||||| ||||||||  |||| ||||||   ||||||||||||||||||| ||||| || |||| |||| ||||||    
T  12083992 cagacactcctcagattaggcacgtccaggtgtcactgacacttgtaattacactgaattatgtagttttctcaatttatta 12083911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 110
Target Start/End: Complemental strand, 14209165 - 14209092
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccg 110  Q
    ||||||||||||||||||| ||||| | ||||||| |||||||||  ||||| ||||| || ||||| |||||||    
T  14209165 gacacttgtaattacactgaattatgtgattttttaaaattattagttgtgtcggcgtgtc-gtgtctgtgtccg 14209092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 28812635 - 28812597
Alignment:
Q  1 cagacactcctcggattaggcgtgtcccggtgtcggaca 39  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  28812635 cagacactcctcggattaggcgtgtcctgctgtcggaca 28812597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 1509641 - 1509604
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  1509641 gacactcctccgattaggcgtgtaccggtgtcggacac 1509604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 3163983 - 3164020
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  3163983 gacactcctcgaattaggcgtgtctcggtgtcggacac 3164020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 8039850 - 8039899
Alignment:
Q  44 taattacactgcattatctaattttttcaaattattaactgtgttggcgt 93  Q
    ||||||||||| ||||| ||||||| ||||||||||| | ||||||||||    
T  8039850 taattacactgaattatataattttctcaaattattagcggtgttggcgt 8039899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 102
Target Start/End: Complemental strand, 14747616 - 14747547
Alignment:
Q  34 cggacacttgtaattacactgcattatctaatttttt-caaattattaactgtgttggcgtatcagtgtc 102  Q
    ||||| ||||||||||||||  ||||| | ||||||| |||||||||| |||||| ||||| ||||||||    
T  14747616 cggacccttgtaattacactaaattatgtgatttttttcaaattattagctgtgtcggcgtgtcagtgtc 14747547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 24204993 - 24205030
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||| ||||||||||||| ||||||||||||    
T  24204993 gacactcctcgaattaggcgtgtcctggtgtcggacac 24205030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 28918110 - 28918073
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  28918110 gacactccttggattaggcgtgtcccagtgtcggacac 28918073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 34910365 - 34910312
Alignment:
Q  40 cttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgt 93  Q
    ||||||||||||||| ||||| | |||||||||||||||||  ||||| |||||    
T  34910365 cttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgt 34910312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 41961591 - 41961628
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||| ||||||||||||||||||| |||||||||||    
T  41961591 gacacttctcggattaggcgtgtcccagtgtcggacac 41961628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 3631791 - 3631755
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggaca 39  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  3631791 gacactcctcggactaggcgtgtcctggtgtcggaca 3631755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 4990974 - 4991018
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattatta 80  Q
    ||||||||||||||||||| ||||| ||||||| ||||| |||||    
T  4990974 gacacttgtaattacactgaattatgtaattttctcaaactatta 4991018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 7171607 - 7171571
Alignment:
Q  4 acactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||||| |||||||||||||| |||||||||||||    
T  7171607 acactccttggattaggcgtgtcgcggtgtcggacac 7171571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 8383309 - 8383237
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||| ||||||||||| ||||| | ||||| ||||||||||| | |||| ||||| ||| |||| |||||    
T  8383309 gacacttataattacactgaattatatgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtc 8383237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 8789500 - 8789536
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggaca 39  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  8789500 gacactcctcggattaggcgtgtctcggtgtccgaca 8789536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 14829741 - 14829670
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    |||||||||||||||  || ||||| | |||||| |||||||||| |||||| ||||| |||||||| |||||    
T  14829741 gacacttgtaattaccatgaattatgtgattttt-caaattattagctgtgtcggcgtgtcagtgtctgtgtc 14829670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 21211400 - 21211364
Alignment:
Q  4 acactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  21211400 acactcctcggattaggagtgtcccagtgtcggacac 21211364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 25074901 - 25074865
Alignment:
Q  4 acactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  25074901 acactcctcggattaggtgtgtcccagtgtcggacac 25074865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 49651793 - 49651837
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattatta 80  Q
    |||||||||||||||| || ||||| | |||||||||||||||||    
T  49651793 gacacttgtaattacagtgaattatgtgattttttcaaattatta 49651837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 4e-19; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 13770743 - 13770671
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||||||||||||||| ||||| ||||||||| ||||||||| |||||| |||||||||||||| |||||    
T  13770743 gacacttgtaattacactgaattatgtaatttttttaaattattagctgtgtcggcgtatcagtgtccgtgtc 13770671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 24105730 - 24105658
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||||||||||||||| || ||  |||||||||||||||||| |||||| ||||| |||||||| |||||    
T  24105730 gacacttgtaattacactgaatcatgcaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 24105658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 108
Target Start/End: Original strand, 18215149 - 18215265
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggaca-----------cttgtaattacactgcattatctaattttttcaaattattaactgtgttggc 91  Q
    |||||||||| ||||||||||||||||||||||||||           ||||||| ||||||||||||| | ||||||||||||||||| ||| || |||    
T  18215149 gacactcctcagattaggcgtgtcccggtgtcggacacgacaccgacacttgtaactacactgcattatgtgattttttcaaattattagctgcgtcggc 18215248  T
Q  92 gtatcagtgtcagtgtc 108  Q
    || | |||||| |||||    
T  18215249 gtgttagtgtccgtgtc 18215265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 24339694 - 24339628
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 102  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||| |||||| ||||| ||| ||||    
T  24339694 gacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcaatgtc 24339628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 5409783 - 5409820
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  5409783 gacactcctcggattaggcgtgtcccggtgtcggacac 5409820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 7438758 - 7438693
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgt 101  Q
    |||||||||||||||| || ||||| | |||||||||||||||||||||||| ||| | |||||||    
T  7438758 gacacttgtaattacattgaattatgtgattttttcaaattattaactgtgtcggcatgtcagtgt 7438693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 102
Target Start/End: Complemental strand, 25481953 - 25481888
Alignment:
Q  37 acacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 102  Q
    |||||||||||||||||| ||||| | ||||||||||||||||| |||||| ||||| ||| ||||    
T  25481953 acacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtc 25481888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 32287415 - 32287456
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacacttgt 44  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  32287415 gacactcctcggattaggtgtgtcccggtgtcggacacttgt 32287456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 27945093 - 27945021
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||||||||||||||| ||||| ||||||| |||||||||||   |||| ||||| |||||||| |||||    
T  27945093 gacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtc 27945021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 43027476 - 43027548
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    |||||||||| |||||||||||||| | ||||||||||||||||| ||| || | ||| |||||||| |||||    
T  43027476 gacacttgtatttacactgcattatgtgattttttcaaattattagctgggtcgccgtgtcagtgtccgtgtc 43027548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 114
Target Start/End: Original strand, 9408341 - 9408420
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc-agtgtccgtgtc 114  Q
    ||||||||||||||||||  ||||| | |||||||||||||||||| ||||| || || ||||||||  |||||||||||    
T  9408341 gacacttgtaattacactaaattatgtgattttttcaaattattaattgtgtcggtgtgtcagtgtctggtgtccgtgtc 9408420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 598315 - 598278
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||| |||||||||||||||||||||||||||||||    
T  598315 gacacttctcggattaggcgtgtcccggtgtcggacac 598278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 6490823 - 6490786
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||||||||||||| |||||||||||||||||||||    
T  6490823 gacactcctcggattaagcgtgtcccggtgtcggacac 6490786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 9778612 - 9778575
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  9778612 gacactccttggattaggcgtgtcccggtgtcggacac 9778575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 14729810 - 14729773
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||||||||||||| |||||||||||||||||||||    
T  14729810 gacactcctcggattaagcgtgtcccggtgtcggacac 14729773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 123
Target Start/End: Complemental strand, 30813904 - 30813778
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacact-------tgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtat 95  Q
    ||||||||||||||||||||||| | | ||||||||||        ||||||||||||| ||||| ||||||| ||||||||||| |  ||| || ||||    
T  30813904 gacactcctcggattaggcgtgttctgatgtcggacacgcaacacctgtaattacactgaattatgtaattttctcaaattattagcaatgtcggagtat 30813805  T
Q  96 cagtgtcagtgtccgtgtctgtgtccgt 123  Q
    ||||||| || | ||||| |||||||||    
T  30813804 cagtgtctgtct-cgtgtatgtgtccgt 30813778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 43027416 - 43027453
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  43027416 gacactcatcggattaggcgtgtcccggtgtcggacac 43027453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 11061083 - 11061155
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    |||||||||||||| |||  ||||| | ||||||||||||||||| |||||| || || |||||||| |||||    
T  11061083 gacacttgtaattatactaaattatgtgattttttcaaattattagctgtgtcggtgtgtcagtgtccgtgtc 11061155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 21880204 - 21880160
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattatta 80  Q
    ||||||||||||||||||| ||||| ||||||| |||||||||||    
T  21880204 gacacttgtaattacactgaattatgtaattttctcaaattatta 21880160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 24105784 - 24105748
Alignment:
Q  4 acactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||| |||||||||||||||||||||||||    
T  24105784 acactcctcgggttaggcgtgtcccggtgtcggacac 24105748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 24339758 - 24339726
Alignment:
Q  5 cactcctcggattaggcgtgtcccggtgtcgga 37  Q
    |||||||||||||||||||||||||||||||||    
T  24339758 cactcctcggattaggcgtgtcccggtgtcgga 24339726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 26033468 - 26033512
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattatta 80  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||    
T  26033468 gacacttgtaattacactgaattatgtgattttttcaaattatta 26033512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 40287314 - 40287350
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggaca 39  Q
    ||||||||||||||||||| |||||||||||||||||    
T  40287314 gacactcctcggattaggcatgtcccggtgtcggaca 40287350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 43250045 - 43249973
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||| ||||||||||| ||||| | ||||| ||||||||||| | |||| ||||| |||||||| |||||    
T  43250045 gacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtc 43249973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 21864917 - 21864878
Alignment:
Q  1 cagacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||||| ||||| ||||||||||||||||||||    
T  21864917 cagacactcctcgaattagacgtgtcccggtgtcggacac 21864878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 40131949 - 40131988
Alignment:
Q  1 cagacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||||||||||| |||||||| |||||||||||    
T  40131949 cagacactcctcggattagacgtgtccctgtgtcggacac 40131988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 5409843 - 5409909
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 102  Q
    ||||||||||||| ||||| ||||| | ||||||||||||||||| |||| |  |||| ||||||||    
T  5409843 gacacttgtaattgcactgaattatgtgattttttcaaattattagctgtatcagcgtgtcagtgtc 5409909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 21930680 - 21930615
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 102  Q
    |||||||||||||| | || ||||||||||||||| ||||||||| ||| || ||||| ||||||||    
T  21930680 gacacttgtaattaaaatgaattatctaatttttt-aaattattagctgagtcggcgtgtcagtgtc 21930615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 155
Target Start/End: Complemental strand, 24105675 - 24105629
Alignment:
Q  109 cgtgtctgtgtccgtgtcgtatctgtatccgtatccatgcttcatag 155  Q
    |||||| ||||||||||||| || |||||||||||| ||||||||||    
T  24105675 cgtgtcagtgtccgtgtcgtgtccgtatccgtatccgtgcttcatag 24105629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 1433566 - 1433529
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||||||||| ||||||| ||||||||||||    
T  1433566 gacactcctcggattagacgtgtcctggtgtcggacac 1433529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 13770803 - 13770766
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||| ||||||||||||||| ||||||||||||||    
T  13770803 gacactcttcggattaggcgtgttccggtgtcggacac 13770766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 28155622 - 28155565
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgt 93  Q
    ||||||||||||||||| | ||||| ||||||| ||||||||||| | |||| |||||    
T  28155622 gacacttgtaattacaccgaattatgtaattttctcaaattattagcggtgtcggcgt 28155565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 29763141 - 29763178
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||||||||||||||||| | ||||||||||    
T  29763141 gacactcctcggattaggcgtgtcctgatgtcggacac 29763178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 32093967 - 32094004
Alignment:
Q  4 acactcctcggattaggcgtgt-cccggtgtcggacac 40  Q
    |||||||||||||||||||||| |||||||||||||||    
T  32093967 acactcctcggattaggcgtgtccccggtgtcggacac 32094004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 43250111 - 43250074
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||| ||||||||||||| ||||||||||||    
T  43250111 gacactcctcgaattaggcgtgtcctggtgtcggacac 43250074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 3294257 - 3294293
Alignment:
Q  4 acactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  3294257 acactcttcggattaggcgtgtcccggtgttggacac 3294293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 3991376 - 3991332
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattatta 80  Q
    |||||||||||||| |||| ||||| | |||||||||||||||||    
T  3991376 gacacttgtaattatactgaattatgtgattttttcaaattatta 3991332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 8842291 - 8842323
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcg 35  Q
    ||||||||| |||||||||||||||||||||||    
T  8842291 gacactccttggattaggcgtgtcccggtgtcg 8842323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 19213855 - 19213811
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattatta 80  Q
    |||||||||| |||||||||||||| | ||||||| |||||||||    
T  19213855 gacacttgtatttacactgcattatgtgattttttaaaattatta 19213811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 21880259 - 21880223
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggaca 39  Q
    |||||| |||||||||||||||||| |||||||||||    
T  21880259 gacacttctcggattaggcgtgtcctggtgtcggaca 21880223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 102
Target Start/End: Complemental strand, 23191942 - 23191882
Alignment:
Q  42 tgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 102  Q
    ||||||||||||| | ||| | ||||| ||||||||||| | |||| ||||||||||||||    
T  23191942 tgtaattacactgaaatatgtgattttctcaaattattagcggtgtcggcgtatcagtgtc 23191882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 38804502 - 38804538
Alignment:
Q  4 acactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||||||||||||||| |||||||| |||||||||    
T  38804502 acactcctcggattaggcatgtcccggcgtcggacac 38804538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 4e-19; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 21374706 - 21374794
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtcc-gtgtctgtgtccgt 123  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||| |||||| ||||| | |||||| |||||| ||||| ||||||||    
T  21374706 gacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtccggtgtccgtgtccgt 21374794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 15972925 - 15972853
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||||||||||||||| ||| | |||||||||||||||||||| ||||| ||||| |||||||| |||||    
T  15972925 gacacttgtaattacactgaattgtgtaattttttcaaattattaattgtgtcggcgtgtcagtgtccgtgtc 15972853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 30404857 - 30404929
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||||| |||| ||||| |||||||| |||||    
T  30404857 gacacttgtaattacactgaattatgtgattttttcaaattattaaccgtgtcggcgtgtcagtgtccgtgtc 30404929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 39323345 - 39323241
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 102  Q
    |||||||||| |||||||| ||||| ||||    |||||||||||||||||| ||||| ||||||| ||||||||||| | |||| | ||| ||||||||    
T  39323345 gacactcctcagattaggcctgtccaggtg----acacttgtaattacactgaattatgtaattttgtcaaattattagcggtgtcgacgtttcagtgtc 39323250  T
Q  103 agtgtccgt 111  Q
     ||||||||    
T  39323249 cgtgtccgt 39323241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 112
Target Start/End: Original strand, 34221478 - 34221580
Alignment:
Q  6 actcctcggattaggcgtgtcccggtgtcggacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagt 105  Q
    ||||||||||||||||||||||||    | ||||||||||||| ||  | ||||| || |||||||||||||||| |||||| ||| ||||||| || ||    
T  34221478 actcctcggattaggcgtgtcccg----ccgacacttgtaattgcatagaattatgtatttttttcaaattattagctgtgtcggcatatcagtatccgt 34221573  T
Q  106 gtccgtg 112  Q
    |||||||    
T  34221574 gtccgtg 34221580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 111
Target Start/End: Complemental strand, 37559029 - 37558954
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgt 111  Q
    |||||||||||||||| || ||||| | |||||| |||||||||| |||||| ||||| |||||||| ||||||||    
T  37559029 gacacttgtaattacattgaattatgtgatttttacaaattattagctgtgtcggcgtgtcagtgtccgtgtccgt 37558954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 21624319 - 21624246
Alignment:
Q  36 gacacttgtaattacactgcattat-ctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||||||||||||||| ||||| ||| |||||| ||||||||| |||||| ||||| |||||||| |||||    
T  21624319 gacacttgtaattacactgaattatgctatttttttaaaattattagctgtgtcggcgtgtcagtgtctgtgtc 21624246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 37419861 - 37419824
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  37419861 gacactcctcggattaggcgtgtcccggtgtcggacac 37419824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 2438671 - 2438707
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggaca 39  Q
    |||||||||||||||||||||||||||||||||||||    
T  2438671 gacactcctcggattaggcgtgtcccggtgtcggaca 2438707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 6940307 - 6940235
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||||||||||||||  ||||| ||| ||||| ||||||||| |||||| ||||| |||||||| |||||    
T  6940307 gacacttgtaattacacttaattatgtaactttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtc 6940235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 18422015 - 18421943
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||||||||||||||| ||||| | || |||| |||||||||| ||||| ||||| |||||||| |||||    
T  18422015 gacacttgtaattacactgaattatgtgatatttttaaattattaattgtgtcggcgtgtcagtgtccgtgtc 18421943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 20539681 - 20539753
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||||||||||||||  ||||| | ||||||||||||||||| |||||| | ||| |||||||| |||||    
T  20539681 gacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcgacgtgtcagtgtccgtgtc 20539753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 108
Target Start/End: Original strand, 19536373 - 19536477
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacacttgtaattacactgcattatct-aattttttcaaattattaactgtgttggcgtatcagtgt 101  Q
    |||||||||||||||||||||||||  |   | ||||||||||||||||||| ||||| | | ||||||||||||||||  ||||| ||||| ||| |||    
T  19536373 gacactcctcggattaggcgtgtcc--gacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagttgtgtcggcgtgtcattgt 19536470  T
Q  102 cagtgtc 108  Q
    | |||||    
T  19536471 ccgtgtc 19536477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 12940930 - 12941030
Alignment:
Q  23 tgtcccggtgtcggacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgtgtctgtgtccg 122  Q
    |||||| |||||| ||| |||||||||||||| ||||| | |||||||||||||||||  |||||   ||| |||||||| |||| ||||||||| ||||    
T  12940930 tgtccctgtgtcg-acatttgtaattacactgaattatatgattttttcaaattattagttgtgtcaacgtgtcagtgtccgtgt-cgtgtctgtatccg 12941027  T
Q  123 tgt 125  Q
    |||    
T  12941028 tgt 12941030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 18841020 - 18841086
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 102  Q
    ||||||||||||||||||  ||||| |||||||||||||||||||  |||||  |||| ||||||||    
T  18841020 gacacttgtaattacacttaattatgtaattttttcaaattattagttgtgtcagcgtgtcagtgtc 18841086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 114
Target Start/End: Complemental strand, 28677953 - 28677883
Alignment:
Q  44 taattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgtgtc 114  Q
    ||||||||||| ||||| | ||||||||||||||||| | |||| |||||  ||||||||||||| |||||    
T  28677953 taattacactgaattatgtgattttttcaaattattagcggtgtcggcgttccagtgtcagtgtcagtgtc 28677883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 30527610 - 30527680
Alignment:
Q  44 taattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgtgtc 114  Q
    ||||||||||  ||||| | ||||| ||||||||||||| |||| || || ||||||||||||||||||||    
T  30527610 taattacactaaattatatgattttctcaaattattaacagtgtgggtgtgtcagtgtcagtgtccgtgtc 30527680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 19942372 - 19942335
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||||||||||||||||||||||||||||| |||||    
T  19942372 gacactcctcggattaggcgtgtcccggtgtcagacac 19942335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 23058449 - 23058522
Alignment:
Q  36 gacacttgtaattacactgcattatctaatttt-ttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||||||||||||||| ||||| | ||||| ||||||||||||| ||||| ||||| ||| |||| |||||    
T  23058449 gacacttgtaattacactggattatgtgatttttttcaaattattaattgtgtgggcgtgtcactgtccgtgtc 23058522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 26769629 - 26769592
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||||||||||||||||||||||| |||||||||||    
T  26769629 gacactcctcggattaggcgtgtcccagtgtcggacac 26769592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 38117111 - 38117148
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  38117111 gacacccctcggattaggcgtgtcccggtgtcggacac 38117148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 38117167 - 38117232
Alignment:
Q  37 acacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 102  Q
    |||||||||||||||| | | ||| | ||||||||||||||||| |||||| ||||| ||||||||    
T  38117167 acacttgtaattacaccgaagtatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 38117232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 16069269 - 16069333
Alignment:
Q  44 taattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||||||| ||||| | ||||||| ||||||||||| |||| ||||| |||||||| |||||    
T  16069269 taattacactgaattatatgatttttttaaattattaacggtgtcggcgtgtcagtgtccgtgtc 16069333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 18840965 - 18841001
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggaca 39  Q
    |||||||||||||||||| ||||||||||||||||||    
T  18840965 gacactcctcggattaggtgtgtcccggtgtcggaca 18841001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 23058396 - 23058432
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggaca 39  Q
    |||||| ||||||||||||||||||||||||||||||    
T  23058396 gacacttctcggattaggcgtgtcccggtgtcggaca 23058432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 30717537 - 30717581
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattatta 80  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||    
T  30717537 gacacttgtaattacactgaattatgtgattttttcaaattatta 30717581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 34994015 - 34994059
Alignment:
Q  68 tttcaaattattaactgtgttggcgtatcagtgtcagtgtccgtg 112  Q
    ||||||||||||| | ||||||||||||||||||| |||||||||    
T  34994015 tttcaaattattagcggtgttggcgtatcagtgtccgtgtccgtg 34994059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 42832244 - 42832327
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcg------gacacttgtaattacactgcattatctaattttttcaaattatta 80  Q
    ||||||||| |||||||||||||||||| ||||      ||||||| ||||||||||| | ||| ||||||| |||||||||||    
T  42832244 gacactccttggattaggcgtgtcccggagtcggacaccgacacttataattacactgaaatatgtaattttctcaaattatta 42832327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 90
Target Start/End: Original strand, 1886892 - 1886939
Alignment:
Q  43 gtaattacactgcattatctaattttttcaaattattaactgtgttgg 90  Q
    ||||||||| || ||||| ||| |||||||||||||||||||||||||    
T  1886892 gtaattacattgaattatgtaaatttttcaaattattaactgtgttgg 1886939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 2438726 - 2438777
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgt 87  Q
    ||||||||||||||||||| ||||| | ||||||| ||||||||| ||||||    
T  2438726 gacacttgtaattacactgaattatgtgattttttgaaattattagctgtgt 2438777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 11223870 - 11223921
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgt 87  Q
    ||||||||||||||||||| ||||| | ||||||||||| ||||| ||||||    
T  11223870 gacacttgtaattacactgaattatgttattttttcaaaatattagctgtgt 11223921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 111
Target Start/End: Original strand, 19580316 - 19580363
Alignment:
Q  64 attttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgt 111  Q
    |||||||||||||||||||||||  || ||||||||||| ||||||||    
T  19580316 attttttcaaattattaactgtgacggtgtatcagtgtccgtgtccgt 19580363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 28412394 - 28412312
Alignment:
Q  44 taattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgtgtct-gtgtccgtgtc 126  Q
    ||||||||||| ||||| | ||||| ||||||||||||| |||||| ||| | |||||| |||| ||||||| |||||||||||    
T  28412394 taattacactgaattatgtgattttatcaaattattaacggtgttgacgtgttagtgtccgtgt-cgtgtctggtgtccgtgtc 28412312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 14996171 - 14996208
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||||||||||||||| |||||||| |||||    
T  14996171 gacactcctcggattaggcgtgttccggtgtcagacac 14996208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 14996230 - 14996303
Alignment:
Q  36 gacacttgtaattacactgcattatctaatttt-ttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||||||||||||||  ||||| | ||||| |||||||||||| |||||| ||| | |||||||| |||||    
T  14996230 gacacttgtaattacactaaattatatgatttttttcaaattattagctgtgtcggcttgtcagtgtccgtgtc 14996303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 15657982 - 15657945
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||||| |||||||||||||| |||||||||    
T  15657982 gacactcctcggactaggcgtgtcccggcgtcggacac 15657945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 37559084 - 37559047
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  37559084 gacactcctcggattaagcgtgtaccggtgtcggacac 37559047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 117
Target Start/End: Complemental strand, 37986803 - 37986751
Alignment:
Q  64 attttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgtgtctgt 117  Q
    ||||||||||||||||| |||||| ||||| |||||||| ||||||| ||||||    
T  37986803 attttttcaaattattatctgtgtcggcgtgtcagtgtc-gtgtccgagtctgt 37986751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 42511334 - 42511371
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  42511334 gacactcctcggattagccgtgtccctgtgtcggacac 42511371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 4882703 - 4882747
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattatta 80  Q
    ||||||||||||||||||| ||||| | |||||||||||| ||||    
T  4882703 gacacttgtaattacactgaattatatcattttttcaaataatta 4882747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 10535698 - 10535734
Alignment:
Q  4 acactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||||||||||||||||||||| |||||| |||||    
T  10535698 acactcctcggattaggcgtgtcctggtgtcagacac 10535734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 11223805 - 11223841
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggaca 39  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  11223805 gacactcctcagattaggcgtgtcccggtgtcagaca 11223841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 12224329 - 12224293
Alignment:
Q  4 acactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||||| |||||||||||||||| |||||||||||    
T  12224329 acactccttggattaggcgtgtcccagtgtcggacac 12224293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 12668430 - 12668474
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattatta 80  Q
    ||||||| ||||||||||| ||||| | |||||||||||||||||    
T  12668430 gacacttataattacactgaattatgtcattttttcaaattatta 12668474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 20473374 - 20473302
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||||||||||||||| ||||| | | ||||| |||||||||  ||||| ||| | |||||||| |||||    
T  20473374 gacacttgtaattacactgaattatatgagttttttaaattattagttgtgtcggcatgtcagtgtctgtgtc 20473302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 36756351 - 36756423
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||| ||||||||||| ||||| | |||| ||||||||||||  ||||| | ||| |||||||| |||||    
T  36756351 gacacttataattacactgaattatgttatttcttcaaattattagttgtgtcgacgtgtcagtgtctgtgtc 36756423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 37 - 111
Target Start/End: Complemental strand, 51862 - 51788
Alignment:
Q  37 acacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgt 111  Q
    |||||||||||||||||| ||||| | ||||||||||||||||| |||||| ||||| |||||||| ||||||||    
T  51862 acacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgt 51788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 51930 - 51893
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||| |||||||||||||||||||||||||| ||||||    
T  51930 gacattcctcggattaggcgtgtcccggtgttggacac 51893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 108
Target Start/End: Complemental strand, 46764 - 46662
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 102  Q
    ||||||||||||||||||||||||   |   | |||| |||||||||||||| ||||| | |||||||||||||||||||||||| ||||| ||| ||||    
T  46764 gacactcctcggattaggcgtgtc---gacaccgacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtcggcgtgtcattgtc 46668  T
Q  103 agtgtc 108  Q
     |||||    
T  46667 cgtgtc 46662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 192256 - 192342
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgtgtctgtgtccgt 123  Q
    ||||||||||||||||| | ||||| ||||||| ||||||||||||| |||| ||||| |||||||| || | |||||||||||||||    
T  192256 gacacttgtaattacaccgaattatgtaattttctcaaattattaacggtgtcggcgtgtcagtgtccgtat-cgtgtctgtgtccgt 192342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 178825 - 178898
Alignment:
Q  36 gacacttgtaattacactgcattatc-taattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||||||||||||||| |||||  | |||||||||||||||||  ||||| ||||| |||||||| |||||    
T  178825 gacacttgtaattacactgaattatgatgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtc 178898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 8798805 - 8798890
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacacttgtaattacactgcattatctaattttttcaaattattaactgtgtt 88  Q
    ||||||||| ||||||||||||| |||||||||||||| | |||||| | || ||||| | ||||| ||||||||||||| |||||    
T  8798805 gacactccttggattaggcgtgttccggtgtcggacacatataattatattgaattatgttattttctcaaattattaacagtgtt 8798890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 102
Target Start/End: Original strand, 30271300 - 30271364
Alignment:
Q  38 cacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 102  Q
    ||||||||||||||||||||||| | |||||||||||| |||| |||||| ||||| ||||||||    
T  30271300 cacttgtaattacactgcattatgtgattttttcaaatgattagctgtgtcggcgtgtcagtgtc 30271364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 123
Target Start/End: Complemental strand, 24669485 - 24669399
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgtgtctgtgtccgt 123  Q
    ||||||||||||||||||| ||||| ||||||  ||||||||||||| ||||  |||| |||||||| |||| |||||| ||||||||    
T  24669485 gacacttgtaattacactgaattatgtaatttcctcaaattattaacggtgtcagcgtgtcagtgtctgtgt-cgtgtccgtgtccgt 24669399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 111
Target Start/End: Original strand, 36450762 - 36450836
Alignment:
Q  37 acacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgt 111  Q
    |||||||||||||||||| ||| | | |||||||||||||||||  ||||| ||||| |||||||| ||||||||    
T  36450762 acacttgtaattacactgaattctgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtccgt 36450836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 108
Target Start/End: Original strand, 4673435 - 4673504
Alignment:
Q  39 acttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    |||||||||||||||| ||| | | ||||||||||||||||| |||||| ||||| |||||||| |||||    
T  4673435 acttgtaattacactgaattttatgattttttcaaattattatctgtgtcggcgtgtcagtgtctgtgtc 4673504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 22943301 - 22943338
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||||||||||||||||||||||||||||||    
T  22943301 gacactcctcggattaggcgtgtcccggtgtcggacac 22943338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 8343076 - 8343032
Alignment:
Q  1 cagacactcctcggattaggcgtgtcccggtgtcggacacttgta 45  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||    
T  8343076 cagacactcttcggattaggcgtgtcccggtgtcggacacatgta 8343032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 18170489 - 18170561
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    |||| ||||||||||| || ||||| ||||||||||||||| |||| ||||| ||||| |||||||| |||||    
T  18170489 gacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgtgtc 18170561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 18634057 - 18634129
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    |||| ||||||||||| || ||||| ||||||||||||||| |||| ||||| ||||| |||||||| |||||    
T  18634057 gacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgtgtc 18634129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 20873121 - 20873049
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||||||||||||||  ||||| | ||||||||||||||||| || ||| ||||| |||||||| |||||    
T  20873121 gacacttgtaattacactaaattatgtgattttttcaaattattatctatgtcggcgtgtcagtgtccgtgtc 20873049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 22197749 - 22197821
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||||||||||||||  ||||| | | ||||||||||||||| |||||||||||| | |||||| |||||    
T  22197749 gacacttgtaattacactaaattatgtgaatttttcaaattattagctgtgttggcgtgttagtgtctgtgtc 22197821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 22596045 - 22595981
Alignment:
Q  37 acacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgt 101  Q
    |||||||||||||||||| ||||| | ||||||| ||||||||| |||||| ||||| |||||||    
T  22596045 acacttgtaattacactgaattatgttatttttttaaattattagctgtgtcggcgtgtcagtgt 22595981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 22652028 - 22651956
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    |||||||||||||| | || ||||| | ||||||||||||||||| |||||| ||||| |||||||| |||||    
T  22652028 gacacttgtaattatattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 22651956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 29510311 - 29510383
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    |||||||||||||| |||| ||| | | ||||||||||||||||| |||||| ||||| |||||||| |||||    
T  29510311 gacacttgtaattatactgaattttgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 29510383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 102
Target Start/End: Original strand, 30077392 - 30077460
Alignment:
Q  34 cggacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 102  Q
    ||||||||||||||||||||| ||||| | || |||||||||||||| ||| |||||||| || |||||    
T  30077392 cggacacttgtaattacactgaattatgtgatgttttcaaattattagctgcgttggcgtgtccgtgtc 30077460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 8343436 - 8343397
Alignment:
Q  1 cagacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  8343436 cagacactcttcggattaggcgtgtcccggtgtcggacac 8343397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 25566893 - 25566842
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgt 87  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||| ||||||    
T  25566893 gacacttgtaattacactgaattatgtgattttttcaaattattagctgtgt 25566842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 36450704 - 36450743
Alignment:
Q  1 cagacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  36450704 cagacactcctcggattaggcgtgtcctggtgtcggacac 36450743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 41831947 - 41831998
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgt 87  Q
    |||||||||| |||||||| ||||| | ||||||||||||||||||||||||    
T  41831947 gacacttgtagttacactgaattatgtgattttttcaaattattaactgtgt 41831998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 27213632 - 27213542
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgt 93  Q
    |||||| |||||||||| |||||||||||||| ||||| | |||||||| || ||||| | ||||| | ||||||||| | |||| |||||    
T  27213632 gacacttctcggattagccgtgtcccggtgtccgacacatataattacagtgaattatgtgattttctgaaattattagcagtgtcggcgt 27213542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 4298893 - 4298950
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgt 93  Q
    |||||||||||||||| |  ||||| | |||||||||||||||||||||||| |||||    
T  4298893 gacacttgtaattacattaaattatgtgattttttcaaattattaactgtgtcggcgt 4298950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 36
Target Start/End: Complemental strand, 17751763 - 17751730
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcgg 36  Q
    ||||||||||||||||||||||||||||||||||    
T  17751763 gacactcctcggattaggcgtgtcccggtgtcgg 17751730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 36
Target Start/End: Complemental strand, 17760750 - 17760717
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcgg 36  Q
    ||||||||||||||||||||||||||||||||||    
T  17760750 gacactcctcggattaggcgtgtcccggtgtcgg 17760717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 22652094 - 22652057
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  22652094 gacactcctcggattagacgtgtcccggtgtcggacac 22652057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 29510245 - 29510282
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||||||||||||||| |||||||||||||||||||    
T  29510245 gacactcctcggattaggtgtgtcccggtgtcggacac 29510282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 100
Target Start/End: Complemental strand, 31557045 - 31556985
Alignment:
Q  39 acttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtg 100  Q
    |||||||||||||||| ||||| | |||||| ||||||||||||||||| ||||| ||||||    
T  31557045 acttgtaattacactgaattatgtgattttt-caaattattaactgtgtcggcgtgtcagtg 31556985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 4948704 - 4948660
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattatta 80  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||    
T  4948704 gacacttgtaattacactgaattatgtgattttttcaaattatta 4948660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 8343368 - 8343296
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||||||||||||||  ||||| | ||||||||||||||||| || ||| || || || |||||||||||    
T  8343368 gacacttgtaattacactaaattatgtgattttttcaaattattagctatgtcggtgtgtcggtgtcagtgtc 8343296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 24727760 - 24727826
Alignment:
Q  37 acacttgtaattacactgcattatctaa--ttttttcaaattattaactgtgttggcgtatcagtgt 101  Q
    ||||||| |||||||||||||||| |||  ||||||||||||||||  ||||||| ||| |||||||    
T  24727760 acacttgaaattacactgcattatgtaattttttttcaaattattagttgtgttgacgtgtcagtgt 24727826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 44067568 - 44067497
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgt 107  Q
    ||||||| ||||||||||| ||||| | ||||| ||||||||||| | |||| ||||| |||||||| ||||    
T  44067568 gacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtcggtgt 44067497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 91
Target Start/End: Complemental strand, 7442896 - 7442842
Alignment:
Q  37 acacttgtaattacactgcattatctaattttttcaaattattaactgtgttggc 91  Q
    |||||||||||||||||| ||||| ||||||| | ||||||||| | ||||||||    
T  7442896 acacttgtaattacactgaattatgtaattttatgaaattattagcggtgttggc 7442842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 13436920 - 13436954
Alignment:
Q  1 cagacactcctcggattaggcgtgtcccggtgtcg 35  Q
    ||||||||||| |||||||||||||||||||||||    
T  13436920 cagacactccttggattaggcgtgtcccggtgtcg 13436954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 13436971 - 13437037
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 102  Q
    ||||||||| |||||  || ||||| | ||||||||||||||||| |||||| ||||| ||||||||    
T  13436971 gacacttgttattaccatgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 13437037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 37
Target Start/End: Original strand, 15816070 - 15816104
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcgga 37  Q
    |||||| ||||||||||||||||||||||||||||    
T  15816070 gacacttctcggattaggcgtgtcccggtgtcgga 15816104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 15816136 - 15816202
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 102  Q
    ||||||| ||||||||||  ||||| | |||||||||||||||||  ||||| ||||| ||||||||    
T  15816136 gacacttataattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtc 15816202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 25192354 - 25192420
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 102  Q
    ||||||| |||||| |||| ||||| | | ||||||||||||||| |||||| ||||| ||||||||    
T  25192354 gacacttataattatactgaattatgtcactttttcaaattattagctgtgtcggcgtgtcagtgtc 25192420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 5813699 - 5813662
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  5813699 gacactcctccaattaggcgtgtcccggtgtcggacac 5813662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 20679347 - 20679384
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||||||||| | |||||||||||||||||||||||    
T  20679347 gacactcctcggttaaggcgtgtcccggtgtcggacac 20679384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 25566939 - 25566910
Alignment:
Q  1 cagacactcctcggattaggcgtgtcccgg 30  Q
    ||||||||||||||||||||||||||||||    
T  25566939 cagacactcctcggattaggcgtgtcccgg 25566910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 40064069 - 40064032
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||||||||||||||  |||||||||||||||||||    
T  40064069 gacactcctcggattagatgtgtcccggtgtcggacac 40064032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 40332298 - 40332261
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  40332298 gacactcctcggattaggcgcgtcccggtgtgggacac 40332261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 44067634 - 44067597
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||| ||||||||||||| ||||||||||||    
T  44067634 gacactcctcgaattaggcgtgtcctggtgtcggacac 44067597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 2572063 - 2572107
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattatta 80  Q
    ||||||||||||||||||  ||||| | |||||||||||||||||    
T  2572063 gacacttgtaattacactaaattatgtgattttttcaaattatta 2572107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 4673364 - 4673400
Alignment:
Q  1 cagacactcctcggattaggcgtgtcccggtgtcgga 37  Q
    ||||||||||| ||||||||||||| |||||||||||    
T  4673364 cagacactccttggattaggcgtgttccggtgtcgga 4673400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 8343024 - 8342980
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattatta 80  Q
    ||||||||||||||||||  ||||| | |||||||||||||||||    
T  8343024 gacacttgtaattacactaaattatgtgattttttcaaattatta 8342980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 16641919 - 16641951
Alignment:
Q  1 cagacactcctcggattaggcgtgtcccggtgt 33  Q
    |||||||||||||||||||| ||||||||||||    
T  16641919 cagacactcctcggattaggtgtgtcccggtgt 16641951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 24205760 - 24205796
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggaca 39  Q
    ||||||||||||||||||||||| |||||||| ||||    
T  24205760 gacactcctcggattaggcgtgttccggtgtcagaca 24205796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 28642457 - 28642409
Alignment:
Q  39 acttgtaattacactgcattatctaattttttcaaattattaactgtgt 87  Q
    ||||||| |||||||| ||||| ||| ||||||||||||||||| ||||    
T  28642457 acttgtagttacactgaattatgtaaatttttcaaattattaaccgtgt 28642409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 44462151 - 44462183
Alignment:
Q  7 ctcctcggattaggcgtgtcccggtgtcggaca 39  Q
    ||||||||||||| |||||||||||||||||||    
T  44462151 ctcctcggattagacgtgtcccggtgtcggaca 44462183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 44469684 - 44469716
Alignment:
Q  7 ctcctcggattaggcgtgtcccggtgtcggaca 39  Q
    ||||||||||||| |||||||||||||||||||    
T  44469684 ctcctcggattagacgtgtcccggtgtcggaca 44469716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 20224 - 20152
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||| |||||| ||||| ||| |||| |||||    
T  20224 gacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtc 20152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 3856 - 3928
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||||||||||||||| ||||| | ||||||| ||||||||||| |||| ||| |||||||||| |||||    
T  3856 gacacttgtaattacactgaattatgtgatttttttaaattattaaccgtgtcggcatatcagtgtctgtgtc 3928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 3790 - 3826
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggaca 39  Q
    |||||||||||||||||||||||| || |||||||||    
T  3790 gacactcctcggattaggcgtgtctcgatgtcggaca 3826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 92859 - 92783
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgtg 112  Q
    ||||||||||||||||||| ||||| ||||||| ||||||||||| | |||| ||||| |||||||| || ||||||    
T  92859 gacacttgtaattacactgaattatgtaattttctcaaattattagcggtgtcggcgtgtcagtgtccgtatccgtg 92783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 123680 - 123612
Alignment:
Q  36 gacacttgtaattacactgcattatctaatt---ttttcaaattattaactgtgttggcgtatcagtgt 101  Q
    ||||||||||||||||||| ||||| | |||   |||| ||||||||| |||||||||||| |||||||    
T  123680 gacacttgtaattacactgaattatgtgattctttttttaaattattagctgtgttggcgtgtcagtgt 123612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 92929 - 92893
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggaca 39  Q
    ||||||||||||||||||||||||| |||||| ||||    
T  92929 gacactcctcggattaggcgtgtccaggtgtccgaca 92893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 469 - 535
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 102  Q
    ||||||||||||||||||| ||| | | ||||||||||||||||| | |||| ||||||||||||||    
T  469 gacacttgtaattacactgaattttgtgattttttcaaattattagcagtgtcggcgtatcagtgtc 535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 414 - 451
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||||||||||||||| |||||||||||||||||||    
T  414 gacactcctcggattaggtgtgtcccggtgtcggacac 451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 7040 - 7105
Alignment:
Q  37 acacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtc 102  Q
    ||||||||||||| |||  ||||| ||||||||||||||||||| |||||| | ||||||||||||    
T  7040 acacttgtaattatactaaattatgtaattttttcaaattattagctgtgtcgacgtatcagtgtc 7105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 115
Target Start/End: Complemental strand, 26079 - 25971
Alignment:
Q  7 ctcctcggattaggcgtgtcccggtgtcggacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtg 106  Q
    |||||| | |||||||||||||| |||||||||| | | ||| ||||| || || | ||||| ||| ||||||| |  ||| || |||||||||||||||    
T  26079 ctcctcagcttaggcgtgtcccgatgtcggacacctatgattgcactgaatcatgtcattttctcacattattatcgatgtcggtgtatcagtgtcagtg 25980  T
Q  107 tccgtgtct 115  Q
    |||||||||    
T  25979 tccgtgtct 25971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 8850 - 8778
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||||||||||||||  || || | ||||||||||||||||| |||||| ||||| |||||||| |||||    
T  8850 gacacttgtaattacactaaataatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 8778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 130534 - 130462
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||||||||||||||| ||||| | ||||||||||| |||||||||||| ||| | ||| |||| |||||    
T  130534 gacacttgtaattacactgaattatgtgattttttcaaactattaactgtgtcggcttgtcattgtccgtgtc 130462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 70330 - 70279
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgt 87  Q
    ||||||| ||||||||||| ||||| | ||||||||||||||||||||||||    
T  70330 gacacttataattacactgaattatgttattttttcaaattattaactgtgt 70279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 71843 - 71806
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  71843 gacactcctcggattagtcgtgtcccggtgtcggacac 71806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 241712 - 241675
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    |||||| |||||||||||||||||||||||||||||||    
T  241712 gacacttctcggattaggcgtgtcccggtgtcggacac 241675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 4833 - 4869
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggaca 39  Q
    |||||||||||||||||||||||||| ||||||||||    
T  4833 gacactcctcggattaggcgtgtccctgtgtcggaca 4869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 33375 - 33427
Alignment:
Q  41 ttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgt 93  Q
    |||||||||||||| ||||| | ||||||||||||||||| |||||| |||||    
T  33375 ttgtaattacactgaattatgttattttttcaaattattagctgtgtcggcgt 33427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 225275 - 225347
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||| |||||||| || ||||| | ||||| ||||||||||| |||||| ||||| |||||||| |||||    
T  225275 gacacttataattacattgtattatgtcattttctcaaattattatctgtgtcggcgtgtcagtgtccgtgtc 225347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 93
Target Start/End: Complemental strand, 14580 - 14525
Alignment:
Q  38 cacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgt 93  Q
    ||||||||||||||||| ||||| | |||||||||||||||||  ||||| |||||    
T  14580 cacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgt 14525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 108
Target Start/End: Complemental strand, 19626 - 19556
Alignment:
Q  37 acacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    |||||||||||||||||| ||||| | |||||| ||||||||||  ||| | ||||| ||||||||||||||    
T  19626 acacttgtaattacactgaattatgtgattttt-caaattattagttgtatcggcgtgtcagtgtcagtgtc 19556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 123
Target Start/End: Complemental strand, 23472 - 23386
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtccgtgtctgtgtccgt 123  Q
    ||||||| ||||||||||| ||||| | |||||||  | |||||| |||||| ||||| |||||||| |||| |||||| ||||||||    
T  23472 gacacttataattacactgaattatgtgatttttttgagttattatctgtgtcggcgtgtcagtgtctgtgt-cgtgtccgtgtccgt 23386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 86
Target Start/End: Complemental strand, 23822 - 23771
Alignment:
Q  36 gacacttgtaattacactgcattatct-aattttttcaaattattaactgtg 86  Q
    ||||||||||||||||||| ||||| | | ||||||||||||||||||||||    
T  23822 gacacttgtaattacactgaattatgtgatttttttcaaattattaactgtg 23771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 32811 - 32765
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacacttgtaatta 49  Q
    |||||||||||||||| | ||||||||||||||||||| | ||||||    
T  32811 gacactcctcggattatgtgtgtcccggtgtcggacacatataatta 32765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 37
Target Start/End: Complemental strand, 188507 - 188473
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcgga 37  Q
    ||||||||||||||||||||||||| |||||||||    
T  188507 gacactcctcggattaggcgtgtcctggtgtcgga 188473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 3046 - 3009
Alignment:
Q  3 gacactcctcggattaggcgtgtcccggtgtcggacac 40  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  3046 gacactcctcggattaggcgtgttccggtgtcgaacac 3009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 13448 - 13380
Alignment:
Q  40 cttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||||| ||||| ||||| | ||||| |||||||||||  ||||| ||||| |||||||| |||||    
T  13448 cttgtaattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtc 13380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 108
Target Start/End: Original strand, 21879 - 21947
Alignment:
Q  40 cttgtaattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||||| ||||| ||||| | ||||| |||||||||||  ||||| ||||| |||||||| |||||    
T  21879 cttgtaattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtc 21947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 63825 - 63781
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattatta 80  Q
    ||||||||||||| ||||| ||||| ||||||| |||||||||||    
T  63825 gacacttgtaattgcactgaattatgtaattttctcaaattatta 63781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 90887 - 90823
Alignment:
Q  44 taattacactgcattatctaattttttcaaattattaactgtgttggcgtatcagtgtcagtgtc 108  Q
    ||||||||||| ||||| | ||||| ||||||||||||  ||||||| || |||||||| |||||    
T  90887 taattacactgaattatatgattttctcaaattattaatggtgttggtgtgtcagtgtctgtgtc 90823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 17756 - 17800
Alignment:
Q  36 gacacttgtaattacactgcattatctaattttttcaaattatta 80  Q
    ||||||||||||||||||  ||||| | |||||||||||||||||    
T  17756 gacacttgtaattacactaaattatgtgattttttcaaattatta 17800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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