View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8128_low_13 (Length: 268)

Name: NF8128_low_13
Description: NF8128
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8128_low_13
NF8128_low_13
[»] chr3 (21 HSPs)
chr3 (14-253)||(12033398-12033636)
chr3 (14-251)||(14865711-14865948)
chr3 (14-253)||(17131595-17131834)
chr3 (14-251)||(19235023-19235257)
chr3 (14-116)||(23370458-23370560)
chr3 (47-133)||(51301572-51301658)
chr3 (14-193)||(13302195-13302372)
chr3 (14-193)||(13312851-13313028)
chr3 (56-193)||(13323782-13323920)
chr3 (47-120)||(10389429-10389502)
chr3 (47-120)||(10414518-10414591)
chr3 (47-120)||(10421188-10421261)
chr3 (20-113)||(24933787-24933880)
chr3 (62-200)||(17240513-17240652)
chr3 (62-116)||(9534328-9534382)
chr3 (62-116)||(18929246-18929300)
chr3 (64-116)||(20247791-20247843)
chr3 (64-116)||(24192957-24193009)
chr3 (61-113)||(41455097-41455149)
chr3 (61-116)||(16801467-16801521)
chr3 (62-116)||(14762758-14762812)
[»] scaffold0053 (1 HSPs)
scaffold0053 (14-251)||(79442-79680)
[»] chr1 (10 HSPs)
chr1 (14-252)||(20851085-20851323)
chr1 (14-252)||(20857712-20857950)
chr1 (14-252)||(21706140-21706378)
chr1 (14-253)||(21710682-21710920)
chr1 (20-114)||(20044910-20045004)
chr1 (62-135)||(18712780-18712854)
chr1 (62-116)||(20437024-20437078)
chr1 (62-116)||(32651573-32651627)
chr1 (61-113)||(41112038-41112090)
chr1 (62-116)||(19663517-19663571)
[»] chr8 (8 HSPs)
chr8 (14-252)||(24320623-24320861)
chr8 (62-239)||(29643386-29643564)
chr8 (47-116)||(44477623-44477692)
chr8 (47-116)||(44492781-44492850)
chr8 (62-147)||(18614240-18614327)
chr8 (62-200)||(23482053-23482192)
chr8 (64-116)||(8727735-8727787)
chr8 (61-113)||(23866618-23866670)
[»] chr7 (26 HSPs)
chr7 (14-253)||(20906414-20906652)
chr7 (14-251)||(16090940-16091178)
chr7 (14-251)||(29181061-29181299)
chr7 (14-161)||(2971209-2971356)
chr7 (155-253)||(2966828-2966926)
chr7 (50-233)||(2465246-2465427)
chr7 (14-120)||(14319582-14319688)
chr7 (53-233)||(3857357-3857536)
chr7 (18-120)||(14230777-14230879)
chr7 (47-114)||(31155396-31155463)
chr7 (14-116)||(14567204-14567306)
chr7 (62-116)||(11382871-11382925)
chr7 (62-116)||(11389348-11389402)
chr7 (54-116)||(21230952-21231014)
chr7 (61-116)||(14422985-14423040)
chr7 (62-116)||(16009577-16009631)
chr7 (61-113)||(12590643-12590695)
chr7 (61-113)||(13007435-13007487)
chr7 (60-116)||(20311050-20311106)
chr7 (62-116)||(13679494-13679548)
chr7 (62-116)||(15168176-15168230)
chr7 (61-113)||(12709843-12709895)
chr7 (61-113)||(13122914-13122966)
chr7 (61-113)||(13743712-13743764)
chr7 (64-116)||(16677296-16677348)
chr7 (64-116)||(17651532-17651584)
[»] chr2 (14 HSPs)
chr2 (14-253)||(25180882-25181121)
chr2 (13-252)||(10441-10680)
chr2 (14-120)||(27207672-27207778)
chr2 (14-120)||(26885179-26885284)
chr2 (14-239)||(23168252-23168480)
chr2 (14-239)||(23579509-23579737)
chr2 (62-200)||(23265058-23265197)
chr2 (62-200)||(23280126-23280265)
chr2 (47-113)||(5706009-5706075)
chr2 (62-116)||(6483718-6483772)
chr2 (62-116)||(6487185-6487239)
chr2 (62-116)||(21908360-21908414)
chr2 (61-113)||(26583830-26583882)
chr2 (47-79)||(27366534-27366566)
[»] chr4 (7 HSPs)
chr4 (23-251)||(16146791-16147020)
chr4 (54-239)||(27906142-27906328)
chr4 (64-175)||(14486601-14486713)
chr4 (47-113)||(53483708-53483774)
chr4 (60-116)||(15408140-15408196)
chr4 (61-116)||(11848114-11848169)
chr4 (61-113)||(8045832-8045884)
[»] chr5 (21 HSPs)
chr5 (14-252)||(19236765-19237002)
chr5 (14-252)||(22461020-22461258)
chr5 (14-252)||(22467644-22467882)
chr5 (14-253)||(20772834-20773069)
chr5 (14-253)||(20781609-20781844)
chr5 (14-239)||(24929883-24930105)
chr5 (14-239)||(28909243-28909466)
chr5 (14-239)||(28945638-28945861)
chr5 (14-239)||(28895995-28896218)
chr5 (14-239)||(28924821-28925044)
chr5 (53-230)||(20820105-20820279)
chr5 (53-230)||(20827205-20827379)
chr5 (14-239)||(28889291-28889514)
chr5 (54-239)||(34829962-34830146)
chr5 (62-200)||(18407944-18408083)
chr5 (62-200)||(23111200-23111339)
chr5 (60-116)||(22438746-22438802)
chr5 (61-116)||(38144536-38144591)
chr5 (62-116)||(19512387-19512441)
chr5 (62-116)||(28370055-28370109)
chr5 (61-113)||(23528634-23528686)
[»] scaffold0072 (1 HSPs)
scaffold0072 (14-251)||(49922-50161)
[»] chr6 (25 HSPs)
chr6 (14-252)||(20007900-20008138)
chr6 (14-251)||(9099026-9099260)
chr6 (14-233)||(21364436-21364650)
chr6 (14-233)||(23968418-23968632)
chr6 (14-114)||(11288623-11288721)
chr6 (47-239)||(31252300-31252492)
chr6 (47-114)||(15458492-15458559)
chr6 (47-114)||(15465087-15465154)
chr6 (54-116)||(10986173-10986235)
chr6 (47-116)||(34639972-34640041)
chr6 (47-116)||(34646646-34646715)
chr6 (61-116)||(29614146-29614201)
chr6 (62-116)||(4477858-4477912)
chr6 (62-116)||(23839199-23839253)
chr6 (54-116)||(24512836-24512898)
chr6 (61-113)||(12168366-12168418)
chr6 (61-113)||(19287275-19287327)
chr6 (61-113)||(19785869-19785921)
chr6 (61-113)||(19878459-19878511)
chr6 (61-116)||(930095-930150)
chr6 (61-116)||(18800438-18800493)
chr6 (22-89)||(28288472-28288537)
chr6 (62-114)||(9187498-9187550)
chr6 (61-113)||(19884235-19884287)
chr6 (47-79)||(24563475-24563507)
[»] scaffold0023 (1 HSPs)
scaffold0023 (14-251)||(135304-135540)
[»] scaffold1318 (1 HSPs)
scaffold1318 (14-200)||(1865-2051)
[»] scaffold0348 (1 HSPs)
scaffold0348 (56-251)||(9201-9396)
[»] scaffold0131 (1 HSPs)
scaffold0131 (14-226)||(889-1098)
[»] scaffold1469 (1 HSPs)
scaffold1469 (47-239)||(1234-1424)
[»] scaffold0384 (1 HSPs)
scaffold0384 (20-232)||(16023-16233)
[»] scaffold0127 (1 HSPs)
scaffold0127 (14-200)||(10156-10341)
[»] scaffold0029 (3 HSPs)
scaffold0029 (50-233)||(91191-91374)
scaffold0029 (50-233)||(96917-97100)
scaffold0029 (61-114)||(111885-111938)
[»] scaffold0001 (1 HSPs)
scaffold0001 (14-195)||(492981-493162)
[»] scaffold0609 (1 HSPs)
scaffold0609 (47-239)||(5843-6035)
[»] scaffold0553 (2 HSPs)
scaffold0553 (14-116)||(10148-10250)
scaffold0553 (20-89)||(11042-11111)
[»] scaffold0544 (1 HSPs)
scaffold0544 (14-116)||(1478-1580)
[»] scaffold0720 (1 HSPs)
scaffold0720 (18-120)||(3359-3461)
[»] scaffold0261 (1 HSPs)
scaffold0261 (54-239)||(23562-23748)
[»] scaffold0249 (1 HSPs)
scaffold0249 (47-114)||(13880-13947)
[»] scaffold0183 (1 HSPs)
scaffold0183 (14-114)||(6-104)
[»] scaffold0107 (1 HSPs)
scaffold0107 (54-253)||(40524-40725)
[»] scaffold0034 (1 HSPs)
scaffold0034 (54-239)||(73161-73347)
[»] scaffold0026 (2 HSPs)
scaffold0026 (47-116)||(111686-111755)
scaffold0026 (61-116)||(11850-11905)
[»] scaffold0453 (1 HSPs)
scaffold0453 (57-120)||(10546-10609)
[»] scaffold0222 (1 HSPs)
scaffold0222 (62-200)||(16736-16875)
[»] scaffold0019 (1 HSPs)
scaffold0019 (60-239)||(135349-135530)
[»] scaffold2054 (1 HSPs)
scaffold2054 (61-114)||(717-770)
[»] scaffold0099 (1 HSPs)
scaffold0099 (63-239)||(12833-13019)
[»] scaffold0146 (1 HSPs)
scaffold0146 (62-200)||(13548-13687)
[»] scaffold0004 (1 HSPs)
scaffold0004 (62-135)||(116877-116951)
[»] scaffold0924 (1 HSPs)
scaffold0924 (61-116)||(750-805)
[»] scaffold0461 (1 HSPs)
scaffold0461 (62-200)||(8-147)
[»] scaffold0247 (1 HSPs)
scaffold0247 (61-116)||(11342-11397)
[»] scaffold0154 (1 HSPs)
scaffold0154 (61-116)||(30858-30913)
[»] scaffold0129 (1 HSPs)
scaffold0129 (47-113)||(45260-45326)
[»] scaffold0020 (1 HSPs)
scaffold0020 (62-135)||(101928-102002)
[»] scaffold0796 (2 HSPs)
scaffold0796 (20-113)||(1691-1784)
scaffold0796 (20-113)||(5714-5807)
[»] scaffold0235 (1 HSPs)
scaffold0235 (54-115)||(22585-22646)
[»] scaffold0310 (1 HSPs)
scaffold0310 (60-116)||(17644-17700)
[»] scaffold0025 (1 HSPs)
scaffold0025 (64-116)||(14398-14450)
[»] scaffold0456 (2 HSPs)
scaffold0456 (61-116)||(932-987)
scaffold0456 (61-116)||(8077-8132)
[»] scaffold0090 (1 HSPs)
scaffold0090 (61-116)||(18170-18225)
[»] scaffold1461 (1 HSPs)
scaffold1461 (62-120)||(1485-1543)
[»] scaffold0317 (1 HSPs)
scaffold0317 (62-116)||(1387-1441)
[»] scaffold0124 (1 HSPs)
scaffold0124 (62-116)||(34276-34330)
[»] scaffold1773 (1 HSPs)
scaffold1773 (52-113)||(1181-1242)
[»] scaffold0117 (2 HSPs)
scaffold0117 (61-114)||(1897-1950)
scaffold0117 (61-114)||(8574-8627)
[»] scaffold0058 (1 HSPs)
scaffold0058 (61-113)||(294-346)
[»] scaffold0006 (1 HSPs)
scaffold0006 (61-113)||(50182-50234)


Alignment Details
Target: chr3 (Bit Score: 208; Significance: 1e-114; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 14 - 253
Target Start/End: Original strand, 12033398 - 12033636
Alignment:
Q  14 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    |||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12033398 gagaagaacttaggaactgatttgatgtgctt-ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 12033496  T
Q  114 attaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtact 213  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  12033497 attaatcaattgaactgttcttaaggtaaaattgggaaattaagggttaatgatgattttgaaagaaaaggtataagaatcaggtttataatgttgtact 12033596  T
Q  214 ttgatgattagtatgatttcttaatccatgttgttgatgt 253  Q
    |||||| ||||||||||||||||||| |||||||||||||    
T  12033597 ttgatgtttagtatgatttcttaatctatgttgttgatgt 12033636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 14865948 - 14865711
Alignment:
Q  14 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  14865948 gagaagaacttaggaactgatttgctgtgctatttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaa 14865849  T
Q  114 attaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtact 213  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||    
T  14865848 attaatcaattaaactgttcttaaggtaaaattgggaaaataatggttaatgatgattttgaaagaaaaggtgtaagaagcaggtttataatgttgtact 14865749  T
Q  214 ttgatgattagtatgatttcttaatccatgttgttgat 251  Q
    | ||||||||||||||||||||||||||||||||||||    
T  14865748 tggatgattagtatgatttcttaatccatgttgttgat 14865711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 14 - 253
Target Start/End: Complemental strand, 17131834 - 17131595
Alignment:
Q  14 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17131834 gagaagaacttaggaactgatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 17131735  T
Q  114 attaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtact 213  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  17131734 attaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatgattttgaaagaaaaggtataaggatcaggtttataatgttgtact 17131635  T
Q  214 ttgatgattagtatgatttcttaatccatgttgttgatgt 253  Q
    |||||| ||||||||||||||||||| |||||||||||||    
T  17131634 ttgatgtttagtatgatttcttaatctatgttgttgatgt 17131595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 19235023 - 19235257
Alignment:
Q  14 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg-aa 112  Q
    ||||||| |||||||| ||||||||||  ||  || ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||    
T  19235023 gagaagagcttaggaattgatttgctgcact--ttatctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttctgaaa 19235120  T
Q  113 aattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtac 212  Q
    |||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||| || ||||||| || |||||||||||||| ||||||||||     
T  19235121 aattaatcaatttaactgttcttaaggtaaaattgggaaatttagggttaatgatgattctg-aagaaaatgtgtaagaatcaggtttataatgttgta- 19235218  T
Q  213 tttgatgattagtatgatttcttaatccatgttgttgat 251  Q
    ||||||||||||||||||||| ||||| || ||||||||    
T  19235219 tttgatgattagtatgatttcctaatctatattgttgat 19235257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 14 - 116
Target Start/End: Original strand, 23370458 - 23370560
Alignment:
Q  14 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    ||||||||||||||||| |||||||||||||  |||||| | |||||||||||||||||||||| ||||| |||||| ||||||| ||||||||||||||    
T  23370458 gagaagaacttaggaacggatttgctgtgctttttgtctatacaattctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaa 23370557  T
Q  114 att 116  Q
    |||    
T  23370558 att 23370560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 47 - 133
Target Start/End: Complemental strand, 51301658 - 51301572
Alignment:
Q  47 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttc 133  Q
    ||||||| |||||||||||||||||||| ||||||||| ||||| ||||||||| |||||||||||||||||||||||||| |||||    
T  51301658 ttgtcttcgcaattctaaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaattaatcaattgaattgttc 51301572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 14 - 193
Target Start/End: Original strand, 13302195 - 13302372
Alignment:
Q  14 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    |||| |||| ||||||||||||||||||| |  || |||   ||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||    
T  13302195 gagatgaacctaggaactgatttgctgtgttttttttcta--caattctaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaa 13302292  T
Q  114 attaatcaattgaactgttctt-aaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaat 193  Q
    ||||||||| || | ||||||| ||| ||||| |||| || | |||||| ||||||| || ||||| || ||| |||||||    
T  13302293 attaatcaaatgcattgttcttgaagataaaa-tggggaatttagggttgatgatgacttcgaaaggaatggtgtaagaat 13302372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 193
Target Start/End: Original strand, 13312851 - 13313028
Alignment:
Q  14 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    |||| |||| ||||||||||||||||||| |  || |||   ||||||||||||||||||| ||||||||||||||| ||||||||| |||||| |||||    
T  13312851 gagatgaacctaggaactgatttgctgtgttttttttcta--caattctaaggtaagggtgagattatctttcaataatcataatatgtaatttttgaaa 13312948  T
Q  114 attaatcaattgaactgttctt-aaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaat 193  Q
    ||||||||| || | ||||||| ||| |||||| ||| || | |||||| ||||||| || ||||| || ||| |||||||    
T  13312949 attaatcaaatggattgttcttgaagataaaataggg-aatttagggttgatgatgacttcgaaaggaatggtgtaagaat 13313028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 56 - 193
Target Start/End: Original strand, 13323782 - 13323920
Alignment:
Q  56 caattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt-aaggtaaaattgggaaaa 153  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||| ||||  | ||||||| ||| |||||||||| ||     
T  13323782 caattctaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaattaatcaaattagattgttcttgaagataaaattggg-aat 13323880  T
Q  154 taagggttaatgatgattttgaaagaaaaggtataagaat 193  Q
    | |||||| ||||||| || ||||| || ||| |||||||    
T  13323881 ttagggttgatgatgacttcgaaaggaatggtgtaagaat 13323920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 47 - 120
Target Start/End: Original strand, 10389429 - 10389502
Alignment:
Q  47 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc 120  Q
    |||||||||||||||||||||||||||||||||||||||||||  | ||||| ||||||||||||||| |||||    
T  10389429 ttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatc 10389502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 47 - 120
Target Start/End: Original strand, 10414518 - 10414591
Alignment:
Q  47 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc 120  Q
    |||||||||||||||||||||||||||||||||||||||||||  | ||||| ||||||||||||||| |||||    
T  10414518 ttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatc 10414591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 47 - 120
Target Start/End: Original strand, 10421188 - 10421261
Alignment:
Q  47 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc 120  Q
    |||||||||||||||||||||||||||||||||||||||||||  | ||||| ||||||||||||||| |||||    
T  10421188 ttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatc 10421261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 24933787 - 24933880
Alignment:
Q  20 aacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    ||||||||| ||||||||| ||| ||||| |   | ||||||||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  24933787 aacttaggagctgatttgcggtgttaattcttcctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 24933880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 200
Target Start/End: Original strand, 17240513 - 17240652
Alignment:
Q  62 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt--aaggtaaaattgggaaaataagg 158  Q
    ||||||||||||| || ||||| |||||| || ||||| |||||||||||||||| ||| ||||||| |||||||  ||   |||||||||  ||| |||    
T  17240513 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattgaattgttcttgaaaataaaaattggg--aattagg 17240610  T
Q  159 gttaatgatgattttgaaagaaaaggtataagaatcaggttt 200  Q
    ||| ||| |||||||||||| || ||| ||||||||| ||||    
T  17240611 gttgatgctgattttgaaaggaatggtgtaagaatcatgttt 17240652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 9534382 - 9534328
Alignment:
Q  62 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  9534382 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 9534328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 18929300 - 18929246
Alignment:
Q  62 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    ||||||||||||| || ||||| |||||| |||| ||||||||||||||||||||    
T  18929300 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaatt 18929246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 20247791 - 20247843
Alignment:
Q  64 aggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    ||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  20247791 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 20247843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 24193009 - 24192957
Alignment:
Q  64 aggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    ||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  24193009 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 24192957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 41455097 - 41455149
Alignment:
Q  61 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  41455097 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 41455149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 16801467 - 16801521
Alignment:
Q  61 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    |||||||||||||| || ||||| |||||| |||| ||||||||||||||||||||    
T  16801467 ctaaggtaagggtgagactatctctcaataatcat-atatataatttctgaaaatt 16801521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 14762758 - 14762812
Alignment:
Q  62 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    ||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  14762758 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 14762812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 79442 - 79680
Alignment:
Q  14 gagaagaacttaggaactgattt-gctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaa 112  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  79442 gagaagaacttaggaactgattttgctgtgctatttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaa 79541  T
Q  113 aattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtac 212  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||     
T  79542 aattaatcaattaaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtgtaagaatcaggtttataatgttgtat 79641  T
Q  213 tttgatgattagtatgatttcttaatccatgttgttgat 251  Q
    ||  |||||||||||||||||||||||||||||||||||    
T  79642 ttgaatgattagtatgatttcttaatccatgttgttgat 79680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 199; Significance: 1e-108; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 14 - 252
Target Start/End: Original strand, 20851085 - 20851323
Alignment:
Q  14 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20851085 gagaagaacttaggaactgatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 20851184  T
Q  114 attaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtact 213  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||| ||||||||| || |||||||||    
T  20851185 attaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatgattttgaaagaaaaggtataaggatcaggtttatattgttgtact 20851284  T
Q  214 ttgatgattagtatgatttcttaatccatgttgttgatg 252  Q
    |||||| ||||||||||||||||||| ||||||||||||    
T  20851285 ttgatgtttagtatgatttcttaatctatgttgttgatg 20851323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 14 - 252
Target Start/End: Original strand, 20857712 - 20857950
Alignment:
Q  14 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20857712 gagaagaacttaggaactgatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 20857811  T
Q  114 attaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtact 213  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||| ||||||||| || |||||||||    
T  20857812 attaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatgattttgaaagaaaaggtataaggatcaggtttatattgttgtact 20857911  T
Q  214 ttgatgattagtatgatttcttaatccatgttgttgatg 252  Q
    |||||| |||||||| |||||||||| ||||||||||||    
T  20857912 ttgatgtttagtatgttttcttaatctatgttgttgatg 20857950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 14 - 252
Target Start/End: Complemental strand, 21706378 - 21706140
Alignment:
Q  14 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21706378 gagaagaacttaggaactgatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 21706279  T
Q  114 attaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtact 213  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||| ||||||||| || |||||||||    
T  21706278 attaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatgattttgaaagaaaaggtataaggatcaggtttatattgttgtact 21706179  T
Q  214 ttgatgattagtatgatttcttaatccatgttgttgatg 252  Q
    |||||| |||||||| |||||||||| ||||||||||||    
T  21706178 ttgatgtttagtatgttttcttaatctatgttgttgatg 21706140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 14 - 253
Target Start/End: Complemental strand, 21710920 - 21710682
Alignment:
Q  14 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21710920 gagaagaacttaggaactgatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 21710821  T
Q  114 attaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtact 213  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||| | |||||||||||||||||| ||||||| ||||||||| ||||||| |||     
T  21710820 attaatcaattgaactgttcttaaggtaaaattgggaaatttagggtttaagatgattttgaaagaaaaagtataaggatcaggtttataatgttatac- 21710722  T
Q  214 ttgatgattagtatgatttcttaatccatgttgttgatgt 253  Q
    |||||| ||||||||||| ||||||| |||||||||||||    
T  21710721 ttgatgtttagtatgattccttaatctatgttgttgatgt 21710682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 20 - 114
Target Start/End: Original strand, 20044910 - 20045004
Alignment:
Q  20 aacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 114  Q
    ||||||||| ||||||||||||| ||||| |   | ||||||||||||||||||||||||||| ||||||  || |||||||||| |||||||||    
T  20044910 aacttaggagctgatttgctgtgttaattcttcctacaattctaaggtaagggtgggattatccttcaatgatcttaatatataaattctgaaaa 20045004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 135
Target Start/End: Complemental strand, 18712854 - 18712780
Alignment:
Q  62 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt 135  Q
    ||||||| ||||| || ||||| |||||| ||||| ||||||||||||||||||| ||| ||||||| |||||||    
T  18712854 taaggtatgggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttctt 18712780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 20437024 - 20437078
Alignment:
Q  62 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  20437024 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 20437078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 32651627 - 32651573
Alignment:
Q  62 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    ||||||||||||| || ||||| |||||| ||||| |||||||||||||||||||    
T  32651627 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaatt 32651573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 41112090 - 41112038
Alignment:
Q  61 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  41112090 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 41112038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 19663517 - 19663571
Alignment:
Q  62 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    ||||||||||||| || ||||| || ||| ||||| |||||||||||||||||||    
T  19663517 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaatt 19663571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 195; Significance: 1e-106; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 14 - 252
Target Start/End: Original strand, 24320623 - 24320861
Alignment:
Q  14 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24320623 gagaagaacttaggaactgatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 24320722  T
Q  114 attaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtact 213  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||| | ||||||||| || |||||||||    
T  24320723 attaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatgattttgaaagaaaaggtatagggatcaggtttatattgttgtact 24320822  T
Q  214 ttgatgattagtatgatttcttaatccatgttgttgatg 252  Q
    |||||| ||||||||||||||||||| ||||||||||||    
T  24320823 ttgatgtttagtatgatttcttaatctatgttgttgatg 24320861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 62 - 239
Target Start/End: Original strand, 29643386 - 29643564
Alignment:
Q  62 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttc-ttaaggtaaaattgggaaaataaggg 159  Q
    ||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||| ||||||| ||||| | ||| |||||||| | || ||||||    
T  29643386 taaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaattaatcaaattgaattgttcatgaagataaaattgag-aattaaggg 29643484  T
Q  160 ttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatc 239  Q
    || |||||||||| | ||| |  ||| |||||||  ||||  |  ||||||| |||| || | |||||||||||||||||    
T  29643485 ttgatgatgatttaggaaggattggtgtaagaattgggttaattgtgttgtaatttggtgttcagtatgatttcttaatc 29643564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 44477692 - 44477623
Alignment:
Q  47 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    |||||||  ||||||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  44477692 ttgtcttcacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 44477623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 44492850 - 44492781
Alignment:
Q  47 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    |||||||  ||||||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  44492850 ttgtcttcacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 44492781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 147
Target Start/End: Complemental strand, 18614327 - 18614240
Alignment:
Q  62 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaat-caattgaactgttctt-aaggtaaaattg 147  Q
    ||||||||||||| || ||||| |||||| |||| |||||||||||||||||||| || |||||||| ||||||| ||| ||||||||    
T  18614327 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatccaattgaattgttcttgaagataaaattg 18614240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 200
Target Start/End: Original strand, 23482053 - 23482192
Alignment:
Q  62 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt--aaggtaaaattgggaaaataagg 158  Q
    ||||||||||||| || ||||| |||||| ||||| ||||||||||||||||||| ||| ||||||| |||||||  ||   |||||||||  ||| |||    
T  23482053 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttcttgaaaataaaaattggg--aattagg 23482150  T
Q  159 gttaatgatgattttgaaagaaaaggtataagaatcaggttt 200  Q
    ||| ||| ||||||||||||  | ||| ||||||||| ||||    
T  23482151 gttgatgctgattttgaaagggatggtgtaagaatcatgttt 23482192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 8727735 - 8727787
Alignment:
Q  64 aggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    ||||||||||| |||||||  |||||| ||||||| |||||||||||||||||    
T  8727735 aggtaagggtgagattatccctcaataatcataatctataatttctgaaaatt 8727787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 23866670 - 23866618
Alignment:
Q  61 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| ||||||    
T  23866670 ctaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa 23866618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 192; Significance: 1e-104; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 14 - 253
Target Start/End: Original strand, 20906414 - 20906652
Alignment:
Q  14 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    ||||||||||||||||| ||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20906414 gagaagaacttaggaacggatttgctgagctatttgtccttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 20906513  T
Q  114 attaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtact 213  Q
    |||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  20906514 attaatcaattgaactattcttaaggtaaaattggg-aattaagggttaatgatgattttgaaagaaaaggtataagaatcaagtttataatgttgtact 20906612  T
Q  214 ttgatgattagtatgatttcttaatccatgttgttgatgt 253  Q
    |||||| ||||||||||||||||||| |||||||||||||    
T  20906613 ttgatgtttagtatgatttcttaatctatgttgttgatgt 20906652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 16091178 - 16090940
Alignment:
Q  14 gagaagaacttaggaactgattt-gctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaa 112  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16091178 gagaagaacttaggaactgattttgctgtgctatttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaa 16091079  T
Q  113 aattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtac 212  Q
    | |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||     
T  16091078 agttaatcaattaaactgttcctaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtgtaagaatcaggtttataatgttgtat 16090979  T
Q  213 tttgatgattagtatgatttcttaatccatgttgttgat 251  Q
    ||  |||||||||||||||||||||||||||||||||||    
T  16090978 ttgaatgattagtatgatttcttaatccatgttgttgat 16090940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 29181061 - 29181299
Alignment:
Q  14 gagaagaacttaggaactgattt-gctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaa 112  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  29181061 gagaagaacttaggaactgattttgctgtgctatttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaa 29181160  T
Q  113 aattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtac 212  Q
    |||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||     
T  29181161 aattaatcaattaaactattcttaaggtaaaatttggaaaataagggttaatgatgattttgaaagaaaaggtgtaagaatcaggcttataatgttgtat 29181260  T
Q  213 tttgatgattagtatgatttcttaatccatgttgttgat 251  Q
    ||  |||||||||||||||||||||||||||||||||||    
T  29181261 ttgaatgattagtatgatttcttaatccatgttgttgat 29181299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 14 - 161
Target Start/End: Complemental strand, 2971356 - 2971209
Alignment:
Q  14 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  2971356 gagaagaacttaggaactgatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatttataatttctgaaa 2971257  T
Q  114 attaatcaattgaactgttcttaaggtaaaattgggaaaataagggtt 161  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||    
T  2971256 attaatcaattgaactgttcttaaggtaaaattgggaagataagggtt 2971209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 155 - 253
Target Start/End: Complemental strand, 2966926 - 2966828
Alignment:
Q  155 aagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatccatgttgttgatgt 253  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2966926 aagggttaatgatgtttttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatccatgttgttgatgt 2966828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 50 - 233
Target Start/End: Complemental strand, 2465427 - 2465246
Alignment:
Q  50 tctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattggg 149  Q
    ||||||||||||||||||||||||||||| ||| ||||||| | ||||||||| ||||||||||||||| ||||| ||||||| ||| ||||||| | ||    
T  2465427 tctttgcaattctaaggtaagggtgggatcatccttcaataatgataatatatgatttctgaaaattaagcaatttaactgtttttatggtaaaaattgg 2465328  T
Q  150 aaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttc 233  Q
     |||| ||||||||||   |||||| ||||||| || ||||| | |||||| ||||||| || ||||||||||| |||||||||    
T  2465327 gaaattagggttaatggcaattttg-aagaaaatgtgtaagatttaggtttataatgttata-tttgatgattaatatgatttc 2465246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 120
Target Start/End: Original strand, 14319582 - 14319688
Alignment:
Q  14 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    ||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||  |  |||| ||||||||||||||    
T  14319582 gagaagaacttaggaacggatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatgattttaatgtataatttctgaaa 14319681  T
Q  114 attaatc 120  Q
    |||||||    
T  14319682 attaatc 14319688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 53 - 233
Target Start/End: Original strand, 3857357 - 3857536
Alignment:
Q  53 ttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggt---aaaattggg 149  Q
    |||||||||||||||||||||||||| ||||| ||||| | ||||||||| ||||||||||||||| ||||| ||||||| ||| |||   |||||||||    
T  3857357 ttgcaattctaaggtaagggtgggatcatctt-caataatgataatatatgatttctgaaaattaagcaatttaactgtttttatggtaaaaaaattggg 3857455  T
Q  150 aaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttc 233  Q
     |||| ||||||||||   |||||| ||||||| || ||||| | |||||| |||||||||| ||||||||||| |||||||||    
T  3857456 -aaattagggttaatggcaattttg-aagaaaatgtgtaagatttaggtttataatgttgta-tttgatgattaatatgatttc 3857536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 14230879 - 14230777
Alignment:
Q  18 agaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatta 117  Q
    ||||||||||||| ||||||  |||||  |||||||||||||||||||||||||||||||||||||||||||     |||| ||||||||||||||||||    
T  14230879 agaacttaggaacggatttgtcgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatgaatttaatgtataatttctgaaaatta 14230780  T
Q  118 atc 120  Q
    |||    
T  14230779 atc 14230777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 47 - 114
Target Start/End: Complemental strand, 31155463 - 31155396
Alignment:
Q  47 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 114  Q
    |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||    
T  31155463 ttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaa 31155396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 14567306 - 14567204
Alignment:
Q  14 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    ||||||||||||||||| |||||||||||||  |||||| | ||||||||||||||||||| |  || | ||||||  | |||||||||  |||||||||    
T  14567306 gagaagaacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgaggctaaccttcaatgattataatatatggtttctgaaa 14567207  T
Q  114 att 116  Q
    |||    
T  14567206 att 14567204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 11382871 - 11382925
Alignment:
Q  62 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    ||||||||||||| || ||||| |||||| |||||||||||||||||||||||||    
T  11382871 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaatt 11382925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 11389348 - 11389402
Alignment:
Q  62 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    ||||||||||||| || ||||| |||||| |||||||||||||||||||||||||    
T  11389348 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaatt 11389402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 21230952 - 21231014
Alignment:
Q  54 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    ||||| ||||||||||||||| || ||||| |||||| ||||| |||||||||||||||||||    
T  21230952 tgcaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaatt 21231014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 14423040 - 14422985
Alignment:
Q  61 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  14423040 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 14422985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 16009631 - 16009577
Alignment:
Q  62 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  16009631 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 16009577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 12590643 - 12590695
Alignment:
Q  61 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  12590643 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 12590695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 13007487 - 13007435
Alignment:
Q  61 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  13007487 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 13007435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 20311050 - 20311106
Alignment:
Q  60 tctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    ||||||||||||||| || ||||| |||||| ||||||  |||||||||||||||||    
T  20311050 tctaaggtaagggtgagactatctctcaataatcataacgtataatttctgaaaatt 20311106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 13679548 - 13679494
Alignment:
Q  62 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    ||||||||||||| || |||||||||||  |||| ||||||||||| ||||||||    
T  13679548 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaatt 13679494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 15168230 - 15168176
Alignment:
Q  62 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    ||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  15168230 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 15168176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 12709843 - 12709895
Alignment:
Q  61 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| ||||||    
T  12709843 ctaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa 12709895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 13122914 - 13122966
Alignment:
Q  61 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| ||||||    
T  13122914 ctaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa 13122966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 13743764 - 13743712
Alignment:
Q  61 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| ||||||    
T  13743764 ctaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa 13743712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 16677348 - 16677296
Alignment:
Q  64 aggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    ||||||||||| || ||||| |||||| ||||||| |||||||||| ||||||    
T  16677348 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaatt 16677296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 17651584 - 17651532
Alignment:
Q  64 aggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    ||||||||||| || ||||| |||||| ||||||| |||||||||| ||||||    
T  17651584 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaatt 17651532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 188; Significance: 1e-102; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 14 - 253
Target Start/End: Original strand, 25180882 - 25181121
Alignment:
Q  14 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25180882 gagaagaacttaggaactgatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 25180981  T
Q  114 attaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtact 213  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||   ||||||||| || | |||||||    
T  25180982 attaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatgattttgaaagaaaaggtatattgatcaggtttatatttttgtact 25181081  T
Q  214 ttgatgattagtatgatttcttaatccatgttgttgatgt 253  Q
    |||||| ||||||||||||||||||| |||||||||||||    
T  25181082 ttgatgtttagtatgatttcttaatctatgttgttgatgt 25181121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 13 - 252
Target Start/End: Complemental strand, 10680 - 10441
Alignment:
Q  13 tgagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaa 112  Q
    ||||||| ||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10680 tgagaaggacttaggaactgatttgctgtgctttttgtctttgaaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaa 10581  T
Q  113 aattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtac 212  Q
    ||||||||||||||| |||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||| | || |||||| || ||||||||    
T  10580 aattaatcaattgaattgttcttaaggtaaaattgggaaatttagggttaaggatgattttgaaagaaaaggtatagggataaggtttatattgttgtac 10481  T
Q  213 tttgatgattagtatgatttcttaatccatgttgttgatg 252  Q
    ||||||| ||||||||||||||||||| ||||||||||||    
T  10480 tttgatgtttagtatgatttcttaatctatgttgttgatg 10441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 120
Target Start/End: Original strand, 27207672 - 27207778
Alignment:
Q  14 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    ||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||  |  |||| ||||||||||||||    
T  27207672 gagaagaacttaggaacggatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatgattttaatgtataatttctgaaa 27207771  T
Q  114 attaatc 120  Q
    |||||||    
T  27207772 attaatc 27207778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 26885284 - 26885179
Alignment:
Q  14 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    ||||||||||||||||| |||||| ||||||  |||||| ||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||    
T  26885284 gagaagaacttaggaacggatttgatgtgctttttgtctctgcaattctaaggtaagggtgggattatctttcaataatc-taatgtataatttctgaaa 26885186  T
Q  114 attaatc 120  Q
    |||||||    
T  26885185 attaatc 26885179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 239
Target Start/End: Original strand, 23168252 - 23168480
Alignment:
Q  14 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg-aa 112  Q
    |||||||||||||| || | |||||||||||  |||| | |||||||||||||||||||||||||||||||||| |  ||||||| ||||||||||| ||    
T  23168252 gagaagaacttagggacggttttgctgtgctt-ttgtttctgcaattctaaggtaagggtgggattatctttcattgatcataatgtataatttctgaaa 23168350  T
Q  113 aattaatc-aattgaactgttcttaaggt---aaaattgggaaaataagggt-taatgatgattttgaaagaaaaggtataagaatcaggtttttaatgt 207  Q
    |||||||| ||| |||  ||| | ||| |   ||||||  || ||| ||||| | ||| ||||||||||||||||||| ||||| ||| ||||    |||    
T  23168351 aattaatctaatagaatagttttgaagataaaaaaatt--gagaattagggtatgatgctgattttgaaagaaaaggtgtaagagtcatgtttaatgtgt 23168448  T
Q  208 tgtactttgatgattagtatgatttcttaatc 239  Q
    |||| ||||||| | |||||||||||||||||    
T  23168449 tgtaatttgatgttcagtatgatttcttaatc 23168480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 239
Target Start/End: Original strand, 23579509 - 23579737
Alignment:
Q  14 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg-aa 112  Q
    |||||||||||||| || | |||||||||||  |||| | |||||||||||||||||||||||||||||||||| |  ||||||| ||||||||||| ||    
T  23579509 gagaagaacttagggacggttttgctgtgctt-ttgtttctgcaattctaaggtaagggtgggattatctttcattgatcataatgtataatttctgaaa 23579607  T
Q  113 aattaatc-aattgaactgttcttaaggt---aaaattgggaaaataagggt-taatgatgattttgaaagaaaaggtataagaatcaggtttttaatgt 207  Q
    |||||||| ||| |||  ||| | ||| |   ||||||  || ||| ||||| | ||| ||||||||||||||||||| ||||| ||| ||||    |||    
T  23579608 aattaatctaatagaatagttttgaagataaaaaaatt--gagaattagggtatgatgctgattttgaaagaaaaggtgtaagagtcatgtttaatgtgt 23579705  T
Q  208 tgtactttgatgattagtatgatttcttaatc 239  Q
    |||| ||||||| | |||||||||||||||||    
T  23579706 tgtaatttgatgttcagtatgatttcttaatc 23579737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 200
Target Start/End: Complemental strand, 23265197 - 23265058
Alignment:
Q  62 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt-aaggtaaaattgggaaaataaggg 159  Q
    ||||||||||||| || ||||| |||||| ||||| ||||||||||||||||||| ||| ||||||| ||||||| ||  ||||| |  || ||| ||||    
T  23265197 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttcttgaaaataaaaat-tgagaattaggg 23265099  T
Q  160 ttaatgatgattttgaaagaaaaggtataagaatcaggttt 200  Q
    || ||| |||||||||||| || ||| ||||||||| ||||    
T  23265098 ttgatgctgattttgaaaggaatggtgtaagaatcatgttt 23265058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 200
Target Start/End: Complemental strand, 23280265 - 23280126
Alignment:
Q  62 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt-aaggtaaaattgggaaaataaggg 159  Q
    ||||||||||||| || ||||| |||||| ||||| ||||||||||||||||||| ||| ||||||| ||||||| ||  ||||| |  || ||| ||||    
T  23280265 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttcttgaaaataaaaat-tgagaattaggg 23280167  T
Q  160 ttaatgatgattttgaaagaaaaggtataagaatcaggttt 200  Q
    || ||| |||||||||||| || ||| ||||||||| ||||    
T  23280166 ttgatgctgattttgaaaggaatggtgtaagaatcatgttt 23280126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 113
Target Start/End: Original strand, 5706009 - 5706075
Alignment:
Q  47 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    ||||||| |||||||||||||||||||| || ||||| ||| || ||||||| ||||||| ||||||    
T  5706009 ttgtcttcgcaattctaaggtaagggtgagactatctctcattaatcataatctataattcctgaaa 5706075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 6483772 - 6483718
Alignment:
Q  62 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  6483772 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 6483718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 6487239 - 6487185
Alignment:
Q  62 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  6487239 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 6487185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 21908414 - 21908360
Alignment:
Q  62 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    ||||||||||||| || ||||| |||||| |||| ||||||||||||||||||||    
T  21908414 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaatt 21908360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 26583882 - 26583830
Alignment:
Q  61 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  26583882 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 26583830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 79
Target Start/End: Original strand, 27366534 - 27366566
Alignment:
Q  47 ttgtctttgcaattctaaggtaagggtgggatt 79  Q
    |||||||||||||||||||||||||||| ||||    
T  27366534 ttgtctttgcaattctaaggtaagggtgagatt 27366566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 186; Significance: 1e-101; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 23 - 251
Target Start/End: Original strand, 16146791 - 16147020
Alignment:
Q  23 ttaggaactgattt-gctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatca 121  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16146791 ttaggaactgattttgctgtgctatttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaaattaatca 16146890  T
Q  122 attgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgat 221  Q
    ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||  |||||    
T  16146891 attaaactgttcttaaggtaaaatttggaaaataagggttaatgatgattttgaaagaaaaggtgtaagaatcaggtttataatgttgtatttgaatgat 16146990  T
Q  222 tagtatgatttcttaatccatgttgttgat 251  Q
    ||||||||||||||||||||||||||||||    
T  16146991 tagtatgatttcttaatccatgttgttgat 16147020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 54 - 239
Target Start/End: Complemental strand, 27906328 - 27906142
Alignment:
Q  54 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaat-caattgaactgttctt-aaggtaaaattgggaa 151  Q
    |||||||||||| |||||||||||||||||||||||  ||||||| ||||||||||||||||||||  ||| |||  |||||| ||| |||||||  ||     
T  27906328 tgcaattctaagataagggtgggattatctttcaatgatcataatgtataatttctgaaaattaatataatagaatagttcttgaagataaaatt--gag 27906231  T
Q  152 aataagggt-taatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatc 239  Q
    ||| ||||| | ||| ||||||||||||||||||| ||||||||| ||||    ||||||| ||||||| |  ||||||||||||||||    
T  27906230 aattagggtgtgatgttgattttgaaagaaaaggtgtaagaatcatgtttaatgtgttgtaatttgatgttccgtatgatttcttaatc 27906142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 64 - 175
Target Start/End: Complemental strand, 14486713 - 14486601
Alignment:
Q  64 aggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt-aaggtaaaattgggaaaataagggtt 161  Q
    ||||||||||| || |||| ||||||  ||||||||||||||||||||||||||||| ||||||| ||||||| ||| |||||||||||| || ||||||    
T  14486713 aggtaagggtgagactatccttcaatgatcataatatataatttctgaaaattaatcgaattgaattgttcttgaagataaaattgggaatat-agggtt 14486615  T
Q  162 aatgatgattttga 175  Q
     |||||||||||||    
T  14486614 gatgatgattttga 14486601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 113
Target Start/End: Complemental strand, 53483774 - 53483708
Alignment:
Q  47 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    ||||||| |||||||||||||||||||| || ||||| |||||| ||||||| ||||||| ||||||    
T  53483774 ttgtcttcgcaattctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa 53483708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 15408196 - 15408140
Alignment:
Q  60 tctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    ||||||||||||||| || ||||| |||||| ||||| |||||||||||||||||||    
T  15408196 tctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaatt 15408140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 11848169 - 11848114
Alignment:
Q  61 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| |||||||||    
T  11848169 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 11848114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 8045832 - 8045884
Alignment:
Q  61 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    |||||||||||||| || ||||| || ||| ||||||| ||||||||||||||    
T  8045832 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaa 8045884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 183; Significance: 5e-99; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 14 - 252
Target Start/End: Complemental strand, 19237002 - 19236765
Alignment:
Q  14 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19237002 gagaagaacttaggaactgatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 19236903  T
Q  114 attaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtact 213  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||| ||||||||| || |||||||||    
T  19236902 attaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatgattttgaaagaaaaggtataaggatcaggtttatattgttgtact 19236803  T
Q  214 ttgatgattagtatgatttcttaatccatgttgttgatg 252  Q
    |||| | ||||||||  ||||||||| ||||||||||||    
T  19236802 ttga-gtttagtatgtgttcttaatctatgttgttgatg 19236765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 14 - 252
Target Start/End: Complemental strand, 22461258 - 22461020
Alignment:
Q  14 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg-aa 112  Q
    |||||||||||| |||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  22461258 gagaagaacttaagaactgatttgctgtgccttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 22461159  T
Q  113 aattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtac 212  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||| ||||| |||||||||||||||||||| ||||||||| || ||| ||||    
T  22461158 aattaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatga-tttgaaagaaaaggtataaggatcaggtttatattgtcgtac 22461060  T
Q  213 tttgatgattagtatgatttcttaatccatgttgttgatg 252  Q
    ||||||| |||||||| ||||||| || ||||||||||||    
T  22461059 tttgatgtttagtatgttttcttattctatgttgttgatg 22461020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 14 - 252
Target Start/End: Complemental strand, 22467882 - 22467644
Alignment:
Q  14 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg-aa 112  Q
    |||||||||||| |||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  22467882 gagaagaacttaagaactgatttgctgtgccttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 22467783  T
Q  113 aattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtac 212  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||| ||||| |||||||||||||||||||| ||||||||| || ||| ||||    
T  22467782 aattaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatga-tttgaaagaaaaggtataaggatcaggtttatattgtcgtac 22467684  T
Q  213 tttgatgattagtatgatttcttaatccatgttgttgatg 252  Q
    ||||||| |||||||| ||||||| || ||||||||||||    
T  22467683 tttgatgtttagtatgttttcttattctatgttgttgatg 22467644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 14 - 253
Target Start/End: Complemental strand, 20773069 - 20772834
Alignment:
Q  14 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    ||||||| |||||||| ||||||||||| ||  || ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  20773069 gagaagagcttaggaattgatttgctgtact--ttatctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttctgaaa 20772972  T
Q  114 attaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtact 213  Q
    ||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||| || |||||||||||||| |||||||||| |    
T  20772971 attaatcaatttaactgttcttaaggtaaaattgggaaatttagggttaatgatgattttg-aagaaaatgtgtaagaatcaggtttataatgttgta-t 20772874  T
Q  214 ttgatgattagtatgatttcttaatccatgttgttgatgt 253  Q
    |||||||||||||||||||| || || || ||||||||||    
T  20772873 ttgatgattagtatgatttcctactctatattgttgatgt 20772834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 14 - 253
Target Start/End: Complemental strand, 20781844 - 20781609
Alignment:
Q  14 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    ||||||| |||||||| ||||||||||| ||  || ||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||    
T  20781844 gagaagagcttaggaattgatttgctgtact--ttatctttgcaattctaaggtaagggtgggattatctttcaataattataatatatgatttctgaaa 20781747  T
Q  114 attaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtact 213  Q
    ||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||| || |||||||||||||| |||||||||| |    
T  20781746 attaatcaatttaactgttcttaaggtaaaattgggaaatttagggttaatgatgattttg-aagaaaatgtgtaagaatcaggtttataatgttgta-t 20781649  T
Q  214 ttgatgattagtatgatttcttaatccatgttgttgatgt 253  Q
    |||||||||| ||||||||| || || || ||||||||||    
T  20781648 ttgatgattattatgatttcctactctatattgttgatgt 20781609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 14 - 239
Target Start/End: Original strand, 24929883 - 24930105
Alignment:
Q  14 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    ||||||| |||||||| ||| ||||||  ||  || ||||| |||||||||||||||||||||||||||||||||||||  |||||||| |||||| |||    
T  24929883 gagaagagcttaggaattgacttgctgcact--ttatctttacaattctaaggtaagggtgggattatctttcaatagttctaatatatgatttctaaaa 24929980  T
Q  114 a-ttaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtac 212  Q
    | |||||||||| ||||||||||||||||||||||||||| | |||||||||||||||| || ||| ||| || |||||||||||||| ||||||||||     
T  24929981 aattaatcaatttaactgttcttaaggtaaaattgggaaatttagggttaatgatgattctg-aaggaaatgtgtaagaatcaggtttataatgttgta- 24930078  T
Q  213 tttgatgattagtatgatttcttaatc 239  Q
    ||||||||||||||||||||| |||||    
T  24930079 tttgatgattagtatgatttcctaatc 24930105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 14 - 239
Target Start/End: Original strand, 28909243 - 28909466
Alignment:
Q  14 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    ||||||||| |||||| ||||||||||||||  ||||| |||||||||||||||||||||||||| ||||||||||||| ||| ||||| ||||||||||    
T  28909243 gagaagaacctaggaattgatttgctgtgctt-ttgtcgttgcaattctaaggtaagggtgggatcatctttcaatagtgatattatatgatttctgaaa 28909341  T
Q  114 attaatcaattgaactgttcttaaggt-aaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtac 212  Q
    ||||| | ||| || |||||||||||| |||||||||||||| ||| || |||||||||||| ||||||| |  ||| | |||||||| | | ||||||     
T  28909342 attaaactatttaattgttcttaaggtaaaaattgggaaaattaggtttgatgatgattttg-aagaaaatgcgtaaaattcaggtttatgacgttgta- 28909439  T
Q  213 tttgatgattagtatgatttcttaatc 239  Q
    ||| ||||||||||||||||| |||||    
T  28909440 tttaatgattagtatgatttcctaatc 28909466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 14 - 239
Target Start/End: Original strand, 28945638 - 28945861
Alignment:
Q  14 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    ||||||||| |||||| ||||||||||||||  ||||| |||||||||||||||||||||||||| ||||||||||||| ||| ||||| ||||||||||    
T  28945638 gagaagaacctaggaattgatttgctgtgctt-ttgtcgttgcaattctaaggtaagggtgggatcatctttcaatagtgatattatatgatttctgaaa 28945736  T
Q  114 attaatcaattgaactgttcttaaggt-aaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtac 212  Q
    ||||| | ||| || |||||||||||| |||||||||||||| ||| || |||||||||||| ||||||| |  ||| | |||||||| | | ||||||     
T  28945737 attaaactatttaattgttcttaaggtaaaaattgggaaaattaggtttgatgatgattttg-aagaaaatgcgtaaaattcaggtttatgacgttgta- 28945834  T
Q  213 tttgatgattagtatgatttcttaatc 239  Q
    ||| ||||||||||||||||| |||||    
T  28945835 tttaatgattagtatgatttcctaatc 28945861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 14 - 239
Target Start/End: Original strand, 28895995 - 28896218
Alignment:
Q  14 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    ||||||||| |||||| ||||||||||||||  ||| | |||||||||||||||||||||||||| ||||||||||||| ||| ||||| ||||||||||    
T  28895995 gagaagaacctaggaattgatttgctgtgctt-ttgccgttgcaattctaaggtaagggtgggatcatctttcaatagtgatattatatgatttctgaaa 28896093  T
Q  114 attaatcaattgaactgttcttaaggt-aaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtac 212  Q
    ||||| | ||| || |||||||||||| |||||||||||||| ||| || |||||||||||| ||||||| |  ||| | |||||||| | | ||||||     
T  28896094 attaaactatttaattgttcttaaggtaaaaattgggaaaattaggtttgatgatgattttg-aagaaaatgcgtaaaattcaggtttatgacgttgta- 28896191  T
Q  213 tttgatgattagtatgatttcttaatc 239  Q
    ||| ||||||||||||||||| |||||    
T  28896192 tttaatgattagtatgatttcctaatc 28896218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 14 - 239
Target Start/End: Original strand, 28924821 - 28925044
Alignment:
Q  14 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    ||||||||| |||||| ||||||||||||||  ||| | |||||||||||||||||||||||||| ||||||||||||| ||| ||||| ||||||||||    
T  28924821 gagaagaacctaggaattgatttgctgtgctt-ttgccgttgcaattctaaggtaagggtgggatcatctttcaatagtgatattatatgatttctgaaa 28924919  T
Q  114 attaatcaattgaactgttcttaaggt-aaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtac 212  Q
    ||||| | ||| || |||||||||||| |||||||||||||| ||| || |||||||||||| ||||||| |  ||| | |||||||| | | ||||||     
T  28924920 attaaactatttaattgttcttaaggtaaaaattgggaaaattaggtttgatgatgattttg-aagaaaatgcgtaaaattcaggtttatgacgttgta- 28925017  T
Q  213 tttgatgattagtatgatttcttaatc 239  Q
    ||| ||||||||||||||||| |||||    
T  28925018 tttaatgattagtatgatttcctaatc 28925044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 53 - 230
Target Start/End: Complemental strand, 20820279 - 20820105
Alignment:
Q  53 ttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaa 152  Q
    |||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||  |||||  |||| ||| ||||||||||||||||| |||||    
T  20820279 ttgcaattctaaggtaagggtgggatcatctttcaatagtgttaatatataatttctgatgattaagtaattcaaccgttcttaaggtaaaatt-ggaaa 20820181  T
Q  153 ataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgat 230  Q
    || ||||||||||||||||||| |||| || | |||||| |||||||| |||||||||| ||||||||| ||||||||    
T  20820180 attagggttaatgatgattttg-aagagaatgcataagattcaggtttataatgttgta-tttgatgatgagtatgat 20820105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 53 - 230
Target Start/End: Complemental strand, 20827379 - 20827205
Alignment:
Q  53 ttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaa 152  Q
    |||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||  |||||  |||| ||| ||||||||||||||||| |||||    
T  20827379 ttgcaattctaaggtaagggtgggatcatctttcaatagtgttaatatataatttctgatgattaagtaattcaaccgttcttaaggtaaaatt-ggaaa 20827281  T
Q  153 ataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgat 230  Q
    || ||||||||||||||||||| |||| || | |||||| |||||||| |||||||||| ||||||||| ||||||||    
T  20827280 attagggttaatgatgattttg-aagagaatgcataagattcaggtttataatgttgta-tttgatgatgagtatgat 20827205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 14 - 239
Target Start/End: Original strand, 28889291 - 28889514
Alignment:
Q  14 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    ||||||||| |||||| ||||||||  ||||  ||| | |||||||||||||||||||||||||| ||||||||||||| ||| ||||| ||||||||||    
T  28889291 gagaagaacctaggaattgatttgcattgctt-ttgccgttgcaattctaaggtaagggtgggatcatctttcaatagtgatattatatgatttctgaaa 28889389  T
Q  114 attaatcaattgaactgttcttaaggt-aaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtac 212  Q
    ||||| | ||| || |||||||||||| |||||||||||||| ||| || |||||||||||| ||||||| |  ||| | |||||||| | | ||||||     
T  28889390 attaaactatttaattgttcttaaggtaaaaattgggaaaattaggtttgatgatgattttg-aagaaaatgcgtaaaattcaggtttatgacgttgta- 28889487  T
Q  213 tttgatgattagtatgatttcttaatc 239  Q
    ||| ||||||||||||||||| |||||    
T  28889488 tttaatgattagtatgatttcctaatc 28889514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 54 - 239
Target Start/End: Complemental strand, 34830146 - 34829962
Alignment:
Q  54 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt-aaggtaaaattgggaa 151  Q
    ||||||||||||||||||||||||||||||||||||| |  |||| |||||||||||||||| |||| ||| |||  |||||| ||| |||||||  ||     
T  34830146 tgcaattctaaggtaagggtgggattatctttcaataat-ttaatgtataatttctgaaaatcaatctaatagaatagttcttgaagataaaatt--gag 34830050  T
Q  152 aataagggt-taatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatc 239  Q
    ||| ||||| | ||| |||||||||||| |||| | ||||||||| ||||    ||||||| ||||||||| |||||||||||||||||    
T  34830049 aattagggtatgatgctgattttgaaag-aaagatgtaagaatcatgtttaatgtgttgtaatttgatgatcagtatgatttcttaatc 34829962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 200
Target Start/End: Original strand, 18407944 - 18408083
Alignment:
Q  62 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt--aaggtaaaattgggaaaataagg 158  Q
    ||||||||||||| || ||||| |||||| ||||||||||||||||||||||||| ||| ||||||| |||||||  ||   |||||||||  ||| |||    
T  18407944 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattgatctaattgaattgttcttgaaaataaaaattggg--aattagg 18408041  T
Q  159 gttaatgatgattttgaaagaaaaggtataagaatcaggttt 200  Q
    ||| ||| |||||||||||| || ||| ||||||||| ||||    
T  18408042 gttgatgctgattttgaaaggaatggtgtaagaatcatgttt 18408083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 200
Target Start/End: Original strand, 23111200 - 23111339
Alignment:
Q  62 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt--aaggtaaaattgggaaaataagg 158  Q
    ||||||||||||| || ||||| |||||| ||||| ||||||||||||||||||| ||| ||||||| |||||||  ||   |||||||||  ||| |||    
T  23111200 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttcttgaaaataaaaattggg--aattagg 23111297  T
Q  159 gttaatgatgattttgaaagaaaaggtataagaatcaggttt 200  Q
    ||| ||| ||||||||||||  | ||| ||||||||| ||||    
T  23111298 gttgatgctgattttgaaagggatggtgtaagaatcatgttt 23111339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 22438746 - 22438802
Alignment:
Q  60 tctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    ||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  22438746 tctaaggtaagggtgagactatctctcaataatcataatgtataatttctgaaaatt 22438802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 38144536 - 38144591
Alignment:
Q  61 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  38144536 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 38144591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 19512441 - 19512387
Alignment:
Q  62 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  19512441 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 19512387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 28370055 - 28370109
Alignment:
Q  62 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  28370055 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 28370109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 23528686 - 23528634
Alignment:
Q  61 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  23528686 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 23528634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 176; Significance: 7e-95; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 49922 - 50161
Alignment:
Q  14 gagaagaacttaggaactgattt-gctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaa 112  Q
    ||||||||||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||    
T  49922 gagaagaacttaggaactgattttgttgtgctatttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctaaa 50021  T
Q  113 aattaatcaattgaactgttcttaaggt-aaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgta 211  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||    
T  50022 aattaatcaattaaactgttcttaaggtaaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtgtaagaatcaggtttataatgttata 50121  T
Q  212 ctttgatgattagtatgatttcttaatccatgttgttgat 251  Q
     ||  | |||||||||||||||||||||||||||||||||    
T  50122 tttgaaagattagtatgatttcttaatccatgttgttgat 50161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 168; Significance: 4e-90; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 14 - 252
Target Start/End: Original strand, 20007900 - 20008138
Alignment:
Q  14 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    |||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  20007900 gagaagaacttaggaactcatttgctgtgctt-ttgtctttgcaattctaaggtaagggtgggatcatctttcaatagtcataatatataatttatgaaa 20007998  T
Q  114 a-ttaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtac 212  Q
    | |||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||| ||||||||| || ||||||||    
T  20007999 aattaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatgattttgaaagaaaaggtataaggatcaggtttatattgttgtac 20008098  T
Q  213 tttgatgattagtatgatttcttaatccatgttgttgatg 252  Q
    ||||||| |||||||| |||||||||| || |||||||||    
T  20008099 tttgatgtttagtatgttttcttaatctatattgttgatg 20008138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 9099026 - 9099260
Alignment:
Q  14 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg-aa 112  Q
    ||||||| |||||||| ||||||||||  ||  || ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||    
T  9099026 gagaagagcttaggaattgatttgctgcact--ttatctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttctgaaa 9099123  T
Q  113 aattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtac 212  Q
    |||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||| || ||||||| || |||||||||||||| ||||||||||     
T  9099124 aattaatcaatttaactgttcttaaggtaaaattgggaaatttagggttaatgatgattctg-aagaaaatgtgtaagaatcaggtttataatgttgta- 9099221  T
Q  213 tttgatgattagtatgatttcttaatccatgttgttgat 251  Q
    ||||||||||||||||||||| ||||| || ||||||||    
T  9099222 tttgatgattagtatgatttcctaatctatattgttgat 9099260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 14 - 233
Target Start/End: Original strand, 21364436 - 21364650
Alignment:
Q  14 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    ||||||||| |||||| || |||||||||||  ||||||||||||||| |||||||||||||||||||| |||| || | ||||||||| ||||||||||    
T  21364436 gagaagaacctaggaattgttttgctgtgctt-ttgtctttgcaattcaaaggtaagggtgggattatccttcagtaatgataatatatgatttctgaaa 21364534  T
Q  114 attaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtact 213  Q
    ||||| ||||| ||||||| ||| |||||||||||| |||| ||||||||||   |||||  |||||||  | ||||| | |||||| |||||||||| |    
T  21364535 attaagcaatttaactgtt-ttatggtaaaattggg-aaattagggttaatg-gcatttttgaagaaaatatgtaagacttaggtttataatgttgta-t 21364630  T
Q  214 ttgatgattagtatgatttc 233  Q
    |||||||||| |||||||||    
T  21364631 ttgatgattaatatgatttc 21364650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 14 - 233
Target Start/End: Original strand, 23968418 - 23968632
Alignment:
Q  14 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    ||||||||| |||||| || |||||||||||  ||||||||||||||| |||||||||||||||||||| |||| || | ||||||||| ||||||||||    
T  23968418 gagaagaacctaggaattgttttgctgtgctt-ttgtctttgcaattcaaaggtaagggtgggattatccttcagtaatgataatatatgatttctgaaa 23968516  T
Q  114 attaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtact 213  Q
    ||||| ||||| ||||||| ||| |||||||||||| |||| ||||||||||   |||||  |||||||  | ||||| | |||||| |||||||||| |    
T  23968517 attaagcaatttaactgtt-ttatggtaaaattggg-aaattagggttaatg-gcatttttgaagaaaatatgtaagacttaggtttataatgttgta-t 23968612  T
Q  214 ttgatgattagtatgatttc 233  Q
    |||||||||| |||||||||    
T  23968613 ttgatgattaatatgatttc 23968632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 14 - 114
Target Start/End: Original strand, 11288623 - 11288721
Alignment:
Q  14 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    ||||||| |||||||||||||| |||||| |  ||||||| |||||||||||||||||||||||||||||||||||  || |||||||||||||||||||    
T  11288623 gagaagagcttaggaactgatt-gctgtgttt-ttgtcttggcaattctaaggtaagggtgggattatctttcaatgatcttaatatataatttctgaaa 11288720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 47 - 239
Target Start/End: Complemental strand, 31252492 - 31252300
Alignment:
Q  47 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt-aaggtaaaa 144  Q
    |||||||||||||||||||||||||||| |||||||||| |||  | ||||||||||||||||||||||||||| |||||||  |||||| ||| |||||    
T  31252492 ttgtctttgcaattctaaggtaagggtgagattatcttttaatgattataatatataatttctgaaaattaatctaattgaatagttcttgaagataaaa 31252393  T
Q  145 ttgggaaaataagggt-taatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatc 239  Q
    ||  || ||| ||||| | | | |||||||||||| |||||| ||||||| | ||||    ||||||| ||||||| |  ||||||||||||||||    
T  31252392 tt--gagaattagggtatgaggctgattttgaaag-aaaggtgtaagaattatgtttaacgtgttgtaatttgatgctatgtatgatttcttaatc 31252300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 47 - 114
Target Start/End: Complemental strand, 15458559 - 15458492
Alignment:
Q  47 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 114  Q
    |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||    
T  15458559 ttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaa 15458492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 47 - 114
Target Start/End: Complemental strand, 15465154 - 15465087
Alignment:
Q  47 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 114  Q
    |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||    
T  15465154 ttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaa 15465087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 10986173 - 10986235
Alignment:
Q  54 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    ||||||||||||||||||||| || |||||||||||| ||||||| |||||||||| ||||||    
T  10986173 tgcaattctaaggtaagggtgagactatctttcaataatcataatctataatttctaaaaatt 10986235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 34639972 - 34640041
Alignment:
Q  47 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    ||||||| |||||||||||||||||||| || ||||| |||||| || |||| |||||||||||||||||    
T  34639972 ttgtcttcgcaattctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaatt 34640041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 34646646 - 34646715
Alignment:
Q  47 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    ||||||| |||||||||||||||||||| || ||||| |||||| || |||| |||||||||||||||||    
T  34646646 ttgtcttcgcaattctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaatt 34646715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 29614146 - 29614201
Alignment:
Q  61 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  29614146 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 29614201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 4477912 - 4477858
Alignment:
Q  62 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  4477912 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 4477858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 23839253 - 23839199
Alignment:
Q  62 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  23839253 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 23839199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 24512836 - 24512898
Alignment:
Q  54 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    ||||| |||||||| |||||| || ||||| |||||| ||||| |||||||||||||||||||    
T  24512836 tgcaaatctaaggtgagggtgagactatctctcaataatcatagtatataatttctgaaaatt 24512898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 12168418 - 12168366
Alignment:
Q  61 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  12168418 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 12168366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 19287327 - 19287275
Alignment:
Q  61 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  19287327 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 19287275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 19785869 - 19785921
Alignment:
Q  61 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  19785869 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 19785921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 19878511 - 19878459
Alignment:
Q  61 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  19878511 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 19878459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 930095 - 930150
Alignment:
Q  61 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    |||||||||||||| || ||||| |||||| ||||||| |||| ||||||||||||    
T  930095 ctaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaatt 930150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 18800493 - 18800438
Alignment:
Q  61 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    |||| ||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  18800493 ctaatgtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 18800438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 28288472 - 28288537
Alignment:
Q  22 cttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaat 89  Q
    |||||||||||||| |||||| |  |||||||||||||||||||||||||||| || ||||| |||||    
T  28288472 cttaggaactgatt-gctgtgttt-ttgtctttgcaattctaaggtaagggtgagactatctctcaat 28288537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 114
Target Start/End: Complemental strand, 9187550 - 9187498
Alignment:
Q  62 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 114  Q
    ||||||||||||| || ||||| |||||| || ||||| ||||||||||||||    
T  9187550 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaa 9187498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 19884287 - 19884235
Alignment:
Q  61 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    ||||||| |||||| || ||||| |||||| ||||||| ||||||||||||||    
T  19884287 ctaaggttagggtgagactatctctcaataatcataatctataatttctgaaa 19884235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 79
Target Start/End: Complemental strand, 24563507 - 24563475
Alignment:
Q  47 ttgtctttgcaattctaaggtaagggtgggatt 79  Q
    |||||||||||||||||||||||||||| ||||    
T  24563507 ttgtctttgcaattctaaggtaagggtgagatt 24563475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 135540 - 135304
Alignment:
Q  14 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  135540 gagaagagcttaggaactgatttgctgtgctatttgtctttgcaattctaaggtaagcgtgagattatctttcaatagtcataatatataatttctgaaa 135441  T
Q  114 attaatcaattgaactgttctt-aaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtac 212  Q
    |||||||||||||||||||||| |||||||||||| | || |||||||||||||||||||||||||||||||| |||||||||||||| |  |||||||     
T  135440 attaatcaattgaactgttcttaaaggtaaaattgag-aattaagggttaatgatgattttgaaagaaaaggtgtaagaatcaggtttattgtgttgtaa 135342  T
Q  213 tttgatgattagtatgatttcttaatccatgttgttgat 251  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  135341 tttgatg-ttagtatgatttcttaatctatgttgttgat 135304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 14 - 200
Target Start/End: Original strand, 1865 - 2051
Alignment:
Q  14 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    ||||||||||||||||| |||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1865 gagaagaacttaggaacggatttgctgtgctttttgtctttgcaattgtaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 1964  T
Q  114 attaatcaattgaactgttctt-aaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggttt 200  Q
    |||||||||||||||||||||| || ||||||||||| || |||||||||||||||||||||||||||||||| ||||||| ||||||    
T  1965 attaatcaattgaactgttcttgaaagtaaaattggg-aattaagggttaatgatgattttgaaagaaaaggtgtaagaattaggttt 2051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 56 - 251
Target Start/End: Complemental strand, 9396 - 9201
Alignment:
Q  56 caattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttctt-aaggtaaaattgggaaaat 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| || |    
T  9396 caattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaaagtaaaattggg-aatt 9298  T
Q  155 aagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatccatgttgttgat 251  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||| |  ||||||| ||||||| |||||||||||||| |||| |||||||||||    
T  9297 aagggttaatgatgattttgaaagaaaaggtgtaagaattaggtttattgtgttgtaatttgatgtttagtatgatttctcaatctatgttgttgat 9201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 109; Significance: 7e-55; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 14 - 226
Target Start/End: Complemental strand, 1098 - 889
Alignment:
Q  14 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    ||||||||| |||||| ||||||||||||||  |||||||||||||||||||||||||||||||| |||| |||||||| ||||||||| ||||||||||    
T  1098 gagaagaacctaggaattgatttgctgtgctt-ttgtctttgcaattctaaggtaagggtgggatcatctctcaatagtgataatatatgatttctgaaa 1000  T
Q  114 attaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtact 213  Q
    ||||| ||||| ||||||||||| ||||||||||||||||| ||||||||||  ||||||| ||||||| || ||||| | |||||| ||| |||||  |    
T  999 attaagcaatttaactgttcttatggtaaaattgggaaaattagggttaatggcgattttg-aagaaaatgtgtaagatttaggtttataaagttgt-gt 902  T
Q  214 ttgatgattagta 226  Q
    |||||||||||||    
T  901 ttgatgattagta 889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1469 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold1469
Description:

Target: scaffold1469; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 47 - 239
Target Start/End: Complemental strand, 1424 - 1234
Alignment:
Q  47 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaatt 146  Q
    |||||||||||||||||||||||||||||||||  |||||||||||  ||||||||  |||||||||||||| ||||| |||||||||||||||||||||    
T  1424 ttgtctttgcaattctaaggtaagggtgggatttcctttcaatagtgttaatatatgctttctgaaaattaaacaatttaactgttcttaaggtaaaatt 1325  T
Q  147 gggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatc 239  Q
    |||||||| |||  |||||||||||||| ||||||| |  ||||| ||||||||  |||||| ||  |||||||||||||||||||| |||||    
T  1324 gggaaaattaggtctaatgatgattttg-aagaaaatgcgtaagattcaggtttacaatgttata-attgatgattagtatgatttcctaatc 1234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 20 - 232
Target Start/End: Original strand, 16023 - 16233
Alignment:
Q  20 aacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg-aaaattaa 118  Q
    ||||||||| ||||||||||||| ||||| |   | ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||    
T  16023 aacttaggagctgatttgctgtgttaattcttcctacaattctaaggtaagggtgggattatctttcaatagttataatatatgatttctgaaaaattaa 16122  T
Q  119 tcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgat 218  Q
    |||||| ||||||| ||||| ||||| | || || | ||||||||||||||||||| ||||||| ||  ||||||||||||  | |||||||| ||||||    
T  16123 tcaatttaactgtttttaagataaaaattgg-aatttagggttaatgatgattttg-aagaaaatgtgcaagaatcaggttcatgatgttgta-tttgat 16219  T
Q  219 gattagtatgattt 232  Q
    ||||||||||||||    
T  16220 gattagtatgattt 16233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 14 - 200
Target Start/End: Complemental strand, 10341 - 10156
Alignment:
Q  14 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    ||||||||||||||||| |||||||||||||  |||||| | ||||||||||||||||||| ||||||||| ||||| ||||||||| ||||||||||||    
T  10341 gagaagaacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaa 10242  T
Q  114 attaatcaattgaactgttcttaag-gtaaaattgggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggttt 200  Q
    |||||||||||||| ||||| | ||  ||||||||||  ||| |||||| ||| | ||||||||||  | ||| ||||||||| ||||    
T  10241 attaatcaattgaattgttcatgagaataaaattggg--aattagggttgatgctaattttgaaagggatggtgtaagaatcatgttt 10156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 77; Significance: 8e-36; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 50 - 233
Target Start/End: Original strand, 91191 - 91374
Alignment:
Q  50 tctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggt---aaaatt 146  Q
    ||||||||||||||||||||||||||||| ||||||||||| | ||||||||| ||||||||||||||| ||||| ||||||| ||| |||   ||||||    
T  91191 tctttgcaattctaaggtaagggtgggatcatctttcaataatgataatatatgatttctgaaaattaagcaatttaactgtttttatggtaaaaaaatt 91290  T
Q  147 gggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttc 233  Q
    ||| |||| ||||||||||   |||||| ||||||| || ||||| | |||||| |||||||||| ||||||||||| |||||||||    
T  91291 ggg-aaattagggttaatggcaattttg-aagaaaatgtgtaagatttaggtttataatgttgta-tttgatgattaatatgatttc 91374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 50 - 233
Target Start/End: Original strand, 96917 - 97100
Alignment:
Q  50 tctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggt---aaaatt 146  Q
    ||||||||||||||||||||||||||||| ||||||||||| | ||||||||| ||||||||||||||| ||||| ||||||| ||| |||   ||||||    
T  96917 tctttgcaattctaaggtaagggtgggatcatctttcaataatgataatatatgatttctgaaaattaagcaatttaactgtttttatggtaaaaaaatt 97016  T
Q  147 gggaaaataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttc 233  Q
    ||| |||| ||||||||||   |||||| ||||||| || ||||| | |||||| |||||||||| ||||||||||| |||||||||    
T  97017 ggg-aaattagggttaatggcaattttg-aagaaaatgtgtaagatttaggtttataatgttgta-tttgatgattaatatgatttc 97100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 111938 - 111885
Alignment:
Q  61 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 114  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||||||||||    
T  111938 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 111885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 14 - 195
Target Start/End: Original strand, 492981 - 493162
Alignment:
Q  14 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    ||||||||||||||||| |||||||||||||  |||||| ||||||||||||||||||||| ||||||||||||||| || |||| ||||||||||||||    
T  492981 gagaagaacttaggaacggatttgctgtgctttttgtctctgcaattctaaggtaagggtgagattatctttcaataatc-taatgtataatttctgaaa 493079  T
Q  114 attaatc-aattgaactgttctt-aaggtaaaattgggaaaataagggt-taatgatgattttgaaagaaaaggtataagaatca 195  Q
    ||||||| ||| |||  ||||||  || ||||||   || ||| ||||| ||||| ||||||||||||||||||| |||||||||    
T  493080 attaatctaatggaatagttcttggagataaaat--agagaattagggtataatgctgattttgaaagaaaaggtgtaagaatca 493162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 47 - 239
Target Start/End: Original strand, 5843 - 6035
Alignment:
Q  47 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt-aaggtaaaa 144  Q
    |||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||| |||||||  |||||| ||| |||||    
T  5843 ttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaattaatctaattgaatagttcttgaagataaaa 5942  T
Q  145 ttgggaaaataagggt-taatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatc 239  Q
    ||  || ||| ||||| | | | |||||||||||| |||||| ||||||| | ||||   |||||||| ||||||| |  ||||||||||||||||    
T  5943 tt--gagaattagggtatgaggctgattttgaaag-aaaggtgtaagaattatgtttaacatgttgtaatttgatgttatgtatgatttcttaatc 6035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 67; Significance: 8e-30; HSPs: 2)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 14 - 116
Target Start/End: Original strand, 10148 - 10250
Alignment:
Q  14 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    ||||||||||||||||| |||||||||||||  |||||| | |||||||||||||||||||||| ||||| |||||| ||||||| ||||||||||||||    
T  10148 gagaagaacttaggaacggatttgctgtgctttttgtctatacaattctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaa 10247  T
Q  114 att 116  Q
    |||    
T  10248 att 10250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 11042 - 11111
Alignment:
Q  20 aacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaat 89  Q
    ||||||||| ||||||||||||| ||||| |   |  |||||||||||||||||||||||||| ||||||    
T  11042 aacttaggagctgatttgctgtgttaattcttcctaaaattctaaggtaagggtgggattatccttcaat 11111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 14 - 116
Target Start/End: Original strand, 1478 - 1580
Alignment:
Q  14 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    ||||||||||||||||| |||||||||||||  |||||| | |||||||||||||||||||||| ||||| |||||| ||||||| ||||||||||||||    
T  1478 gagaagaacttaggaacggatttgctgtgctttttgtctatacaattctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaa 1577  T
Q  114 att 116  Q
    |||    
T  1578 att 1580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 3359 - 3461
Alignment:
Q  18 agaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatta 117  Q
    ||||||||||||| ||||||| |||||  ||||||||||||||||||||||||||||  |||||||||||||     |||||||||||||||||||||||    
T  3359 agaacttaggaacggatttgccgtgctttttgtctttgcaattctaaggtaagggtgatattatctttcaatgaatttaatatataatttctgaaaatta 3458  T
Q  118 atc 120  Q
    |||    
T  3459 atc 3461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 54 - 239
Target Start/End: Original strand, 23562 - 23748
Alignment:
Q  54 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt-aaggtaaaattgggaa 151  Q
    |||||||||||||||||||||||||||||||| |||  ||||||| ||||||||||||||||||||| ||  |||  |||||| |||  ||||||  ||     
T  23562 tgcaattctaaggtaagggtgggattatctttgaatgatcataatgtataatttctgaaaattaatctaaaagaatagttcttgaagacaaaatt--gag 23659  T
Q  152 aataagggt-taatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatc 239  Q
    ||| ||||| | ||| ||||||||||||||||| | ||||||||| ||||    ||||||| ||||||| | |||||||||||||||||    
T  23660 aattagggtgtgatgctgattttgaaagaaaagatgtaagaatcatgtttaatgtgttgtaatttgatgttcagtatgatttcttaatc 23748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 47 - 114
Target Start/End: Original strand, 13880 - 13947
Alignment:
Q  47 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 114  Q
    |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||    
T  13880 ttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaa 13947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 114
Target Start/End: Complemental strand, 104 - 6
Alignment:
Q  14 gagaagaacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    ||||||| |||||||| ||| ||||||  ||  || |||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||    
T  104 gagaagagcttaggaattgacttgctgcact--ttatctttgcaattctaaggtaagggtgggattatctttcaatagttctaatatatgatttctgaaa 7  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 54 - 253
Target Start/End: Original strand, 40524 - 40725
Alignment:
Q  54 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaat--taatcaattgaactgttcttaaggtaaaattgggaa 151  Q
    ||||| ||||||||||||||| || ||||| |||||| ||||| ||||||||||||||||||  |  | |  |||| ||||||| || ||||| | || |    
T  40524 tgcaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgttttaacatgaattgttcttgagataaaaattggga 40623  T
Q  152 aataagggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatccatgttgttgat 251  Q
    ||| |||||| ||| |||||||||||| || ||| |||| |||| ||||    ||||||| ||||||| | || |||||||||||||| ||  |||||||    
T  40624 aattagggttgatgctgattttgaaaggaatggtgtaaggatcatgtttaacgtgttgtaatttgatgttcagaatgatttcttaatctataatgttgat 40723  T
Q  252 gt 253  Q
    ||    
T  40724 gt 40725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 239
Target Start/End: Complemental strand, 73347 - 73161
Alignment:
Q  54 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt-aaggtaaaattgggaa 151  Q
    ||||||| | ||||||||||||||||||||||||||  ||||||| |||||||| |||||||||||| ||| | |  | |||| ||| |||||||  ||     
T  73347 tgcaattatgaggtaagggtgggattatctttcaatgatcataatgtataatttatgaaaattaatctaataggatagctcttgaagataaaatt--gag 73250  T
Q  152 aataagggt-taatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatc 239  Q
    ||| ||||| | ||| ||||||||||||||| ||| ||||||||| ||||    ||||||| ||||||| |  ||||||||||||||||    
T  73249 aattagggtgtgatgttgattttgaaagaaacggtgtaagaatcatgtttaatgtgttgtaatttgatgttccgtatgatttcttaatc 73161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 111755 - 111686
Alignment:
Q  47 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    ||||||| |||||||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  111755 ttgtcttcgcaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 111686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 11850 - 11905
Alignment:
Q  61 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  11850 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 11905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 57 - 120
Target Start/End: Original strand, 10546 - 10609
Alignment:
Q  57 aattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc 120  Q
    |||||||||||||| ||||||||||||||||||  || |||| |||||||||||||||||||||    
T  10546 aattctaaggtaagtgtgggattatctttcaatgatcttaatgtataatttctgaaaattaatc 10609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 200
Target Start/End: Complemental strand, 16875 - 16736
Alignment:
Q  62 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt--aaggtaaaattgggaaaataagg 158  Q
    ||||||||||||| || ||||| |||||| ||||| ||||||||||||||||||| ||| ||||||| |||||||  ||   |||||||||  ||| |||    
T  16875 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttcttgaaaataaaaattggg--aattagg 16778  T
Q  159 gttaatgatgattttgaaagaaaaggtataagaatcaggttt 200  Q
    ||| ||| |||||||||||| || ||| ||||||||| ||||    
T  16777 gttgatgctgattttgaaaggaatggtttaagaatcatgttt 16736  T

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Target: scaffold0019 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 239
Target Start/End: Complemental strand, 135530 - 135349
Alignment:
Q  60 tctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaat--taatcaattgaactgttcttaaggtaaaattgggaaaataag 157  Q
    ||||||||||||||| || ||||| |||||| ||||| ||||||||||||||||||  |  | |  |||| ||||||| || ||||| | || |||| ||    
T  135530 tctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgttttaacatgaattgttcttgagataaaaattgggaaattag 135431  T
Q  158 ggttaatgatgattttgaaagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatc 239  Q
    |||| ||| |||||||||||| || ||| |||| |||| ||||    ||||||| ||||||| | || ||||||||||||||    
T  135430 ggttgatgctgattttgaaaggaatggtgtaaggatcatgtttaatgtgttgtaatttgatgttcagaatgatttcttaatc 135349  T

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Target: scaffold2054 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 770 - 717
Alignment:
Q  61 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 114  Q
    |||||||||||||||||||||||||||||  || ||||||||||||||||||||    
T  770 ctaaggtaagggtgggattatctttcaatgatcttaatatataatttctgaaaa 717  T

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Target: scaffold0099 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 63 - 239
Target Start/End: Complemental strand, 13019 - 12833
Alignment:
Q  63 aaggtaagggtgggattatcttt-caatagtcataatatataatttctgaaaa-ttaatcaa---ttgaactgttcttaa-ggtaaaatt--gggaaaat 154  Q
    ||||||||||||||||||||||| |||||||  |||||||| |||||| |||| |||||| |   || |||||||||||| ||||||| |  |||||| |    
T  13019 aaggtaagggtgggattatctttacaatagttctaatatatgatttctaaaaaattaatctaaattttaactgttcttaaaggtaaaaattggggaaatt 12920  T
Q  155 aagggttaatg-atgattttgaaagaaaaggtataagaatc-aggtttttaatgttgtactttgatgattagtatgatttcttaatc 239  Q
     |||||||||| |||||| |||| |||| |   |||||||| |||||| |||||||||| ||  ||||||||||||||||| |||||    
T  12919 tagggttaatgtatgattctgaaggaaatgtgttaagaatctaggtttataatgttgtatttgtatgattagtatgatttcctaatc 12833  T

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Target: scaffold0146 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 200
Target Start/End: Complemental strand, 13687 - 13548
Alignment:
Q  62 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt--aaggtaaaattgggaaaataagg 158  Q
    ||||||||||||| || ||||| |||||| || ||||| |||||||||||||||| ||| ||||||| |||||||  ||   |||||||||  ||| |||    
T  13687 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattgaattgttcttgaaaataaaaattggg--aattagg 13590  T
Q  159 gttaatgatgattttgaaagaaaaggtataagaatcaggttt 200  Q
    ||| ||| |||||||||||| || ||| ||||||||| ||||    
T  13589 gttgatgctgattttgaaaggaatggtgtaagaatcatgttt 13548  T

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Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 135
Target Start/End: Complemental strand, 116951 - 116877
Alignment:
Q  62 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt 135  Q
    ||||||||||||| || ||||| |||||| ||||| ||||||||||||||||||| ||| ||||||| |||||||    
T  116951 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttctt 116877  T

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Target: scaffold0924 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 750 - 805
Alignment:
Q  61 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  750 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 805  T

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Target: scaffold0461 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 200
Target Start/End: Original strand, 8 - 147
Alignment:
Q  62 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt--aaggtaaaattgggaaaataagg 158  Q
    ||||||||||||| || ||||| |||||| || ||||| |||||||||||||||| ||| ||||||| |||||||  ||   |||||||||  ||| |||    
T  8 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattgaattgttcttgaaaataaaaattggg--aattagg 105  T
Q  159 gttaatgatgattttgaaagaaaaggtataagaatcaggttt 200  Q
    |||  || |||||||||||| || ||| ||||||||| ||||    
T  106 gttgttgctgattttgaaaggaatggtgtaagaatcatgttt 147  T

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Target: scaffold0247 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 11397 - 11342
Alignment:
Q  61 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  11397 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 11342  T

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Target: scaffold0154 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 30913 - 30858
Alignment:
Q  61 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  30913 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 30858  T

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Target: scaffold0129 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 113
Target Start/End: Original strand, 45260 - 45326
Alignment:
Q  47 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    ||||||| |||| ||||||||||||||| || ||||| |||||| ||||||| ||||||| ||||||    
T  45260 ttgtcttcgcaaatctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa 45326  T

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Target: scaffold0020 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 135
Target Start/End: Original strand, 101928 - 102002
Alignment:
Q  62 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt 135  Q
    ||||||||||||| || ||||| |||||| ||||| ||||||||| ||||||||| ||| ||||||| |||||||    
T  101928 taaggtaagggtgagactatctctcaataatcatagtatataattcctgaaaattgatctaattgaattgttctt 102002  T

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Target: scaffold0796 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 1691 - 1784
Alignment:
Q  20 aacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    ||||||||| ||||||||||||| ||||| |   | |||  |||||||||||||| || ||||| |||||| ||||||| ||||||| ||||||    
T  1691 aacttaggagctgatttgctgtgttaattcttcctacaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa 1784  T

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Target: scaffold0796; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 5714 - 5807
Alignment:
Q  20 aacttaggaactgatttgctgtgctaattgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    ||||||||| ||||||||||||| ||||| |   | |||  |||||||||||||| || ||||| |||||| ||||||| ||||||| ||||||    
T  5714 aacttaggagctgatttgctgtgttaattcttcctacaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa 5807  T

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Target: scaffold0235 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 22585 - 22646
Alignment:
Q  54 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaat 115  Q
    ||||| || |||||||||||| || ||||| |||||| ||||| ||||||||||||||||||    
T  22585 tgcaaatccaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaat 22646  T

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Target: scaffold0310 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 17700 - 17644
Alignment:
Q  60 tctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    ||||||||||||||| || ||||| ||||||  |||||| |||||||||||||||||    
T  17700 tctaaggtaagggtgagactatctctcaataaccataatgtataatttctgaaaatt 17644  T

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Target: scaffold0025 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 14398 - 14450
Alignment:
Q  64 aggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    ||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  14398 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 14450  T

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Target: scaffold0456 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 987 - 932
Alignment:
Q  61 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    |||||||||||||| || ||||| |||||| ||||||| |||| ||||||||||||    
T  987 ctaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaatt 932  T

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Target: scaffold0456; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 8132 - 8077
Alignment:
Q  61 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    |||||||||||||| || ||||| |||||| ||||||| |||| ||||||||||||    
T  8132 ctaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaatt 8077  T

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Target: scaffold0090 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 18225 - 18170
Alignment:
Q  61 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||| ||||||||    
T  18225 ctaaggtaagggtgagactatctctcaataatcataatctataatttttgaaaatt 18170  T

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Target: scaffold1461 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1461
Description:

Target: scaffold1461; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 120
Target Start/End: Original strand, 1485 - 1543
Alignment:
Q  62 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc 120  Q
    ||||||||||||| ||||||||| ||||  || ||||||  ||||||||||||||||||    
T  1485 taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatc 1543  T

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Target: scaffold0317 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 1441 - 1387
Alignment:
Q  62 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    ||||||||||||| || |||||||||||  |||| ||||||||||| ||||||||    
T  1441 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaatt 1387  T

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Target: scaffold0124 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 34276 - 34330
Alignment:
Q  62 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 116  Q
    ||||||||||||| || ||||| || ||| ||||| |||||||||||||||||||    
T  34276 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaatt 34330  T

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Target: scaffold1773 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 113
Target Start/End: Complemental strand, 1242 - 1181
Alignment:
Q  52 tttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    |||||||  |||||||||||||| || ||||| |||||| ||||||| ||||||| ||||||    
T  1242 tttgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa 1181  T

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Target: scaffold0117 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 1897 - 1950
Alignment:
Q  61 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 114  Q
    |||||||||||||| || ||| | |||||| ||||||| |||||||||||||||    
T  1897 ctaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaa 1950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 8574 - 8627
Alignment:
Q  61 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 114  Q
    |||||||||||||| || ||| | |||||| ||||||| |||||||||||||||    
T  8574 ctaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaa 8627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 346 - 294
Alignment:
Q  61 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    |||||||||||||| || ||||| ||||||  |||||| ||||||||||||||    
T  346 ctaaggtaagggtgagactatctctcaataaccataatctataatttctgaaa 294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 50234 - 50182
Alignment:
Q  61 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 113  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| ||||||    
T  50234 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa 50182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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