View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8129_high_6 (Length: 329)
Name: NF8129_high_6
Description: NF8129
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8129_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 3 - 310
Target Start/End: Complemental strand, 10342961 - 10342654
Alignment:
| Q |
3 |
ggactccgagggttacgttgtcattgcttccatgggagaaagaatcaagaagtatggtaccaagatgatcttgagcatgtttgttgttgtaatgaacacc |
102 |
Q |
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| T |
10342961 |
ggacaccgagggttacgttgtcattgcttccatggaagaaagaatcaagaagaatggcaccaagatgatcttgagcatgtttgctgttgtaatgaacacc |
10342862 |
T |
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| Q |
103 |
aacggaaacgactttgtaagagacgtcgagccaatatttagggtttaaaacgttgagggtaacatcccattcagcagatattctagagctgtttatattg |
202 |
Q |
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| T |
10342861 |
tacggaaacgactttgtaagagacgtcgagccaatatttagggtttaaaacgttgagggtaacatcccattcagcagatattctagagctgtttatattg |
10342762 |
T |
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| Q |
203 |
agagagtagagggaagctgatgaaacttcaaactttgggatgacatggggtaaagtggggaggtgtagagtcatacaggggaggtgtaaagtaaagccaa |
302 |
Q |
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| T |
10342761 |
agagagtagagggaagctgatgaaacttcaaactttgggatgacatggggtaatgtggggaggtgtagagttatacgggggaggtgtaaagtaaagccaa |
10342662 |
T |
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| Q |
303 |
tgatgaag |
310 |
Q |
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| T |
10342661 |
tgatgaag |
10342654 |
T |
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