View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8130_low_12 (Length: 302)

Name: NF8130_low_12
Description: NF8130
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8130_low_12
NF8130_low_12
[»] chr3 (26 HSPs)
chr3 (1-300)||(12033430-12033728)
chr3 (1-300)||(17131503-17131801)
chr3 (1-300)||(14865617-14865915)
chr3 (4-299)||(19235057-19235351)
chr3 (1-87)||(51301572-51301658)
chr3 (10-105)||(13302235-13302331)
chr3 (10-76)||(13323782-13323848)
chr3 (1-74)||(10389429-10389502)
chr3 (1-74)||(10414518-10414591)
chr3 (1-74)||(10421188-10421261)
chr3 (10-105)||(13312891-13312987)
chr3 (216-299)||(13302439-13302521)
chr3 (216-299)||(13313095-13313177)
chr3 (216-299)||(13323987-13324069)
chr3 (1-70)||(23370491-23370560)
chr3 (10-67)||(24933823-24933880)
chr3 (16-70)||(9534328-9534382)
chr3 (16-89)||(17240513-17240587)
chr3 (16-70)||(18929246-18929300)
chr3 (18-70)||(20247791-20247843)
chr3 (18-70)||(24192957-24193009)
chr3 (15-67)||(41455097-41455149)
chr3 (15-70)||(16801467-16801521)
chr3 (16-70)||(14762758-14762812)
chr3 (253-299)||(51301366-51301412)
chr3 (258-299)||(17240753-17240794)
[»] scaffold0053 (1 HSPs)
scaffold0053 (1-300)||(79476-79774)
[»] chr4 (9 HSPs)
chr4 (1-300)||(16146816-16147114)
chr4 (18-128)||(14486602-14486713)
chr4 (8-73)||(27906263-27906328)
chr4 (1-67)||(53483708-53483774)
chr4 (14-70)||(15408140-15408196)
chr4 (15-70)||(11848114-11848169)
chr4 (168-299)||(15407911-15408041)
chr4 (15-67)||(8045832-8045884)
chr4 (273-301)||(14486431-14486459)
[»] chr1 (13 HSPs)
chr1 (1-300)||(21710590-21710887)
chr1 (1-300)||(20851118-20851416)
chr1 (1-300)||(20857745-20858043)
chr1 (1-300)||(21706047-21706345)
chr1 (10-68)||(20044946-20045004)
chr1 (16-89)||(18712780-18712854)
chr1 (16-70)||(20437024-20437078)
chr1 (253-299)||(32651345-32651391)
chr1 (16-70)||(32651573-32651627)
chr1 (168-293)||(19663670-19663794)
chr1 (15-67)||(41112038-41112090)
chr1 (16-70)||(19663517-19663571)
chr1 (256-301)||(18712570-18712615)
[»] chr7 (27 HSPs)
chr7 (1-300)||(16090846-16091144)
chr7 (1-300)||(20906447-20906743)
chr7 (1-300)||(29181095-29181393)
chr7 (139-300)||(2966736-2966898)
chr7 (1-115)||(2971209-2971323)
chr7 (4-300)||(2465135-2465427)
chr7 (1-68)||(31155396-31155463)
chr7 (1-74)||(14319615-14319688)
chr7 (7-98)||(3857357-3857447)
chr7 (1-74)||(14230777-14230850)
chr7 (181-299)||(21231125-21231242)
chr7 (16-70)||(11382871-11382925)
chr7 (16-70)||(11389348-11389402)
chr7 (8-70)||(21230952-21231014)
chr7 (15-70)||(14422985-14423040)
chr7 (16-70)||(16009577-16009631)
chr7 (168-299)||(3857516-3857647)
chr7 (15-67)||(12590643-12590695)
chr7 (15-67)||(13007435-13007487)
chr7 (14-70)||(20311050-20311106)
chr7 (16-70)||(13679494-13679548)
chr7 (16-70)||(15168176-15168230)
chr7 (15-67)||(12709843-12709895)
chr7 (15-67)||(13122914-13122966)
chr7 (15-67)||(13743712-13743764)
chr7 (18-70)||(16677296-16677348)
chr7 (18-70)||(17651532-17651584)
[»] scaffold0072 (1 HSPs)
scaffold0072 (1-299)||(49956-50254)
[»] chr8 (10 HSPs)
chr8 (1-300)||(24320656-24320954)
chr8 (16-299)||(29643386-29643668)
chr8 (1-70)||(44477623-44477692)
chr8 (1-70)||(44492781-44492850)
chr8 (16-101)||(18614240-18614327)
chr8 (16-89)||(23482053-23482127)
chr8 (18-70)||(8727735-8727787)
chr8 (216-299)||(25111750-25111833)
chr8 (253-299)||(14056799-14056845)
chr8 (15-67)||(23866618-23866670)
[»] chr2 (14 HSPs)
chr2 (1-300)||(10348-10646)
chr2 (1-261)||(25180915-25181174)
chr2 (1-74)||(26885179-26885251)
chr2 (1-74)||(27207705-27207778)
chr2 (8-68)||(23168291-23168351)
chr2 (8-68)||(23579548-23579608)
chr2 (16-89)||(23265123-23265197)
chr2 (16-89)||(23280191-23280265)
chr2 (1-67)||(5706009-5706075)
chr2 (16-70)||(6483718-6483772)
chr2 (16-70)||(6487185-6487239)
chr2 (16-70)||(21908360-21908414)
chr2 (15-67)||(26583830-26583882)
chr2 (1-33)||(27366534-27366566)
[»] chr5 (28 HSPs)
chr5 (1-300)||(22460927-22461225)
chr5 (1-300)||(19236672-19236969)
chr5 (1-300)||(22467551-22467849)
chr5 (4-300)||(20772742-20773035)
chr5 (4-300)||(20781517-20781810)
chr5 (4-299)||(24929917-24930211)
chr5 (7-128)||(20820159-20820279)
chr5 (7-128)||(20827259-20827379)
chr5 (1-128)||(28909275-28909403)
chr5 (1-128)||(28945670-28945798)
chr5 (7-128)||(28889329-28889451)
chr5 (7-128)||(28896033-28896155)
chr5 (7-128)||(28924859-28924981)
chr5 (16-89)||(18407944-18408018)
chr5 (8-74)||(34830081-34830146)
chr5 (16-89)||(23111200-23111274)
chr5 (14-70)||(22438746-22438802)
chr5 (15-70)||(38144536-38144591)
chr5 (16-70)||(19512387-19512441)
chr5 (16-70)||(28370055-28370109)
chr5 (15-67)||(23528634-23528686)
chr5 (168-300)||(28889488-28889619)
chr5 (168-300)||(28896192-28896323)
chr5 (168-300)||(28909440-28909571)
chr5 (168-300)||(28925018-28925149)
chr5 (172-300)||(28931136-28931263)
chr5 (168-300)||(28945835-28945966)
chr5 (253-299)||(23111436-23111482)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-300)||(135211-135507)
[»] chr6 (28 HSPs)
chr6 (1-300)||(20007932-20008231)
chr6 (4-299)||(9099060-9099354)
chr6 (1-300)||(21364468-21364762)
chr6 (1-300)||(23968450-23968744)
chr6 (1-68)||(15458492-15458559)
chr6 (1-68)||(15465087-15465154)
chr6 (1-101)||(31252390-31252492)
chr6 (1-68)||(11288654-11288721)
chr6 (168-299)||(29097637-29097770)
chr6 (8-70)||(10986173-10986235)
chr6 (1-70)||(34639972-34640041)
chr6 (1-70)||(34646646-34646715)
chr6 (181-299)||(9187268-9187384)
chr6 (221-299)||(24513048-24513126)
chr6 (15-70)||(29614146-29614201)
chr6 (16-70)||(4477858-4477912)
chr6 (16-70)||(23839199-23839253)
chr6 (8-70)||(24512836-24512898)
chr6 (15-67)||(12168366-12168418)
chr6 (15-67)||(19287275-19287327)
chr6 (15-67)||(19785869-19785921)
chr6 (15-67)||(19878459-19878511)
chr6 (15-70)||(930095-930150)
chr6 (15-70)||(18800438-18800493)
chr6 (1-43)||(28288495-28288537)
chr6 (16-68)||(9187498-9187550)
chr6 (15-67)||(19884235-19884287)
chr6 (1-33)||(24563475-24563507)
[»] scaffold0348 (1 HSPs)
scaffold0348 (10-301)||(9107-9396)
[»] scaffold1469 (1 HSPs)
scaffold1469 (1-301)||(1128-1424)
[»] scaffold1318 (1 HSPs)
scaffold1318 (1-128)||(1898-2025)
[»] scaffold0131 (2 HSPs)
scaffold0131 (1-128)||(939-1066)
scaffold0131 (200-300)||(771-870)
[»] scaffold0384 (1 HSPs)
scaffold0384 (10-300)||(16059-16346)
[»] scaffold0029 (3 HSPs)
scaffold0029 (4-300)||(91191-91486)
scaffold0029 (4-300)||(96917-97212)
scaffold0029 (15-68)||(111885-111938)
[»] scaffold0609 (1 HSPs)
scaffold0609 (1-101)||(5843-5945)
[»] scaffold0127 (2 HSPs)
scaffold0127 (1-87)||(10222-10308)
scaffold0127 (253-297)||(10016-10060)
[»] scaffold0249 (1 HSPs)
scaffold0249 (1-68)||(13880-13947)
[»] scaffold0183 (1 HSPs)
scaffold0183 (4-68)||(6-70)
[»] scaffold0261 (1 HSPs)
scaffold0261 (8-74)||(23562-23628)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-74)||(493014-493086)
[»] scaffold0720 (1 HSPs)
scaffold0720 (1-74)||(3388-3461)
[»] scaffold0553 (2 HSPs)
scaffold0553 (1-70)||(10181-10250)
scaffold0553 (11-43)||(11079-11111)
[»] scaffold0544 (1 HSPs)
scaffold0544 (1-70)||(1511-1580)
[»] scaffold0026 (2 HSPs)
scaffold0026 (1-70)||(111686-111755)
scaffold0026 (15-70)||(11850-11905)
[»] scaffold0453 (1 HSPs)
scaffold0453 (11-74)||(10546-10609)
[»] scaffold0034 (1 HSPs)
scaffold0034 (8-74)||(73281-73347)
[»] scaffold2054 (1 HSPs)
scaffold2054 (15-68)||(717-770)
[»] scaffold0222 (2 HSPs)
scaffold0222 (16-89)||(16801-16875)
scaffold0222 (256-299)||(16593-16636)
[»] scaffold0107 (2 HSPs)
scaffold0107 (8-70)||(40524-40586)
scaffold0107 (160-284)||(40677-40800)
[»] scaffold0004 (1 HSPs)
scaffold0004 (16-89)||(116877-116951)
[»] scaffold0019 (2 HSPs)
scaffold0019 (14-70)||(135474-135530)
scaffold0019 (168-299)||(135245-135375)
[»] scaffold0924 (1 HSPs)
scaffold0924 (15-70)||(750-805)
[»] scaffold0247 (1 HSPs)
scaffold0247 (15-70)||(11342-11397)
[»] scaffold0235 (2 HSPs)
scaffold0235 (216-299)||(22792-22875)
scaffold0235 (8-69)||(22585-22646)
[»] scaffold0154 (1 HSPs)
scaffold0154 (15-70)||(30858-30913)
[»] scaffold0124 (2 HSPs)
scaffold0124 (168-295)||(34429-34555)
scaffold0124 (16-70)||(34276-34330)
[»] scaffold0461 (2 HSPs)
scaffold0461 (16-89)||(8-82)
scaffold0461 (216-295)||(207-286)
[»] scaffold0146 (1 HSPs)
scaffold0146 (16-89)||(13613-13687)
[»] scaffold0129 (1 HSPs)
scaffold0129 (1-67)||(45260-45326)
[»] scaffold0020 (1 HSPs)
scaffold0020 (16-89)||(101928-102002)
[»] scaffold0310 (1 HSPs)
scaffold0310 (14-70)||(17644-17700)
[»] scaffold0025 (1 HSPs)
scaffold0025 (18-70)||(14398-14450)
[»] scaffold0456 (2 HSPs)
scaffold0456 (15-70)||(932-987)
scaffold0456 (15-70)||(8077-8132)
[»] scaffold0090 (1 HSPs)
scaffold0090 (15-70)||(18170-18225)
[»] scaffold0085 (1 HSPs)
scaffold0085 (265-300)||(3921-3956)
[»] scaffold1461 (1 HSPs)
scaffold1461 (16-74)||(1485-1543)
[»] scaffold0317 (1 HSPs)
scaffold0317 (16-70)||(1387-1441)
[»] scaffold1773 (1 HSPs)
scaffold1773 (6-67)||(1181-1242)
[»] scaffold0117 (2 HSPs)
scaffold0117 (15-68)||(1897-1950)
scaffold0117 (15-68)||(8574-8627)
[»] scaffold0796 (2 HSPs)
scaffold0796 (15-67)||(1732-1784)
scaffold0796 (15-67)||(5755-5807)
[»] scaffold0099 (1 HSPs)
scaffold0099 (17-68)||(12967-13019)
[»] scaffold0058 (1 HSPs)
scaffold0058 (15-67)||(294-346)
[»] scaffold0006 (1 HSPs)
scaffold0006 (15-67)||(50182-50234)


Alignment Details
Target: chr3 (Bit Score: 230; Significance: 1e-127; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 12033430 - 12033728
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaatt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12033430 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaatt 12033529  T
Q  101 gggaaaataagggttaatgatgattttgnnnnnnnnngggtataagaatcaggttt-taatgtcgtactttgatgattagtatgatttcttaatccatgt 199  Q
    |||||| |||||||||||||||||||||          |||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||| ||||    
T  12033530 gggaaattaagggttaatgatgattttgaaagaaaa--ggtataagaatcaggtttataatgttgtactttgatgtttagtatgatttcttaatctatgt 12033627  T
Q  200 tgttgatgttgatcgtaattggaatgaaaatagaatatgatggatgaattttggaagttttgtatgaatgcttgaatgagctgaattgttgttgttgatg 299  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  12033628 tgttgatgttgatcgtaattgaattgaaaatagaatatgatggatgaattttggaagttttgtatgaatgcttgaatgggctgaattgttgttgttgatg 12033727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 300
Target Start/End: Complemental strand, 17131801 - 17131503
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaatt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17131801 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaatt 17131702  T
Q  101 gggaaaataagggttaatgatgattttgnnnnnnnnngggtataagaatcaggttt-taatgtcgtactttgatgattagtatgatttcttaatccatgt 199  Q
    |||||| | |||||||| ||||||||||          |||||||| ||||||||| |||||| ||||||||||| ||||||||||||||||||| ||||    
T  17131701 gggaaatttagggttaaggatgattttgaaagaaaa--ggtataaggatcaggtttataatgttgtactttgatgtttagtatgatttcttaatctatgt 17131604  T
Q  200 tgttgatgttgatcgtaattggaatgaaaatagaatatgatggatgaattttggaagttttgtatgaatgcttgaatgagctgaattgttgttgttgatg 299  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||    
T  17131603 tgttgatgttgattgtaattggaatgaaaatagaatatgatggatgaattttggaagctttgcatgaatgcttaaatgagctgaattgttgttgttgatg 17131504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 300
Target Start/End: Complemental strand, 14865915 - 14865617
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  14865915 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaaattaatcaattaaactgttcttaaggtaaaatt 14865816  T
Q  101 gggaaaataagggttaatgatgattttgnnnnnnnnngggtataagaatcaggttt-taatgtcgtactttgatgattagtatgatttcttaatccatgt 199  Q
    |||||||||| |||||||||||||||||          ||| |||||| ||||||| |||||| |||||| |||||||||||||||||||||||||||||    
T  14865815 gggaaaataatggttaatgatgattttgaaagaaaa--ggtgtaagaagcaggtttataatgttgtacttggatgattagtatgatttcttaatccatgt 14865718  T
Q  200 tgttgatgttgatcgtaattggaatgaaaatagaatatgatggatgaattttggaagttttgtatgaatgcttgaatgagctgaattgttgttgttgatg 299  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||    
T  14865717 tgttgatattgatcgtaattgaaatgaaaatagaatatgatggatgaattttggaagttctgtatgaatgcttgattgggctgaattgttgttgttgatg 14865618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 4 - 299
Target Start/End: Original strand, 19235057 - 19235351
Alignment:
Q  4 tctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg-aaaattaatcaattgaactgttcttaaggtaaaattgg 102  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||    
T  19235057 tctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttctgaaaaattaatcaatttaactgttcttaaggtaaaattgg 19235156  T
Q  103 gaaaataagggttaatgatgattttgnnnnnnnnngggtataagaatcaggttt-taatgtcgtactttgatgattagtatgatttcttaatccatgttg 201  Q
    |||| | |||||||||||||||| ||           || |||||||||||||| |||||| ||| ||||||||||||||||||||| ||||| || |||    
T  19235157 gaaatttagggttaatgatgattctgaagaaaat---gtgtaagaatcaggtttataatgttgta-tttgatgattagtatgatttcctaatctatattg 19235252  T
Q  202 ttgatgttgatcgtaa-ttggaatgaaaatagaatatgatggatgaattttggaagttttgtatgaatgcttgaatgagctgaattgttgttgttgatg 299  Q
    ||||| |||||| ||| ||||| ||||||||||||||||| ||||||||||||||||| || ||||||| |||| ||   | |||||||||||||||||    
T  19235253 ttgatattgatcataatttggagtgaaaatagaatatgatagatgaattttggaagttctgaatgaatgtttgattggagttaattgttgttgttgatg 19235351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 51301658 - 51301572
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttc 87  Q
    ||||||| |||||||||||||||||||| ||||||||| ||||| ||||||||| |||||||||||||||||||||||||| |||||    
T  51301658 ttgtcttcgcaattctaaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaattaatcaattgaattgttc 51301572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 10 - 105
Target Start/End: Original strand, 13302235 - 13302331
Alignment:
Q  10 caattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttctt-aaggtaaaattgggaa 105  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||| || | ||||||| ||| |||||| |||||    
T  13302235 caattctaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaattaatcaaatgcattgttcttgaagataaaatggggaa 13302331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 76
Target Start/End: Original strand, 13323782 - 13323848
Alignment:
Q  10 caattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaa 76  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||    
T  13323782 caattctaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaattaatcaa 13323848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 10389429 - 10389502
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc 74  Q
    |||||||||||||||||||||||||||||||||||||||||||  | ||||| ||||||||||||||| |||||    
T  10389429 ttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatc 10389502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 10414518 - 10414591
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc 74  Q
    |||||||||||||||||||||||||||||||||||||||||||  | ||||| ||||||||||||||| |||||    
T  10414518 ttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatc 10414591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 10421188 - 10421261
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc 74  Q
    |||||||||||||||||||||||||||||||||||||||||||  | ||||| ||||||||||||||| |||||    
T  10421188 ttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatc 10421261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 105
Target Start/End: Original strand, 13312891 - 13312987
Alignment:
Q  10 caattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttctt-aaggtaaaattgggaa 105  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||| |||||| |||||||||||||| || | ||||||| ||| |||||| |||||    
T  13312891 caattctaaggtaagggtgagattatctttcaataatcataatatgtaatttttgaaaattaatcaaatggattgttcttgaagataaaatagggaa 13312987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 216 - 299
Target Start/End: Original strand, 13302439 - 13302521
Alignment:
Q  216 aattggaatgaaaatagaatatgatggatgaattttggaagttttgtatgaatgcttgaatgagctgaattgttgttgttgatg 299  Q
    ||||||||||||| ||||||||| ||||||||||  ||||||||||||||| |||| |||||  ||||||||||||||||||||    
T  13302439 aattggaatgaaattagaatatgttggatgaattg-ggaagttttgtatgattgctagaatgctctgaattgttgttgttgatg 13302521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 216 - 299
Target Start/End: Original strand, 13313095 - 13313177
Alignment:
Q  216 aattggaatgaaaatagaatatgatggatgaattttggaagttttgtatgaatgcttgaatgagctgaattgttgttgttgatg 299  Q
    ||||||||||||| ||||||||| ||||||||||  ||||||||||||||| |||| |||||  ||||||||||||||||||||    
T  13313095 aattggaatgaaattagaatatgttggatgaattg-ggaagttttgtatgattgctagaatgctctgaattgttgttgttgatg 13313177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 216 - 299
Target Start/End: Original strand, 13323987 - 13324069
Alignment:
Q  216 aattggaatgaaaatagaatatgatggatgaattttggaagttttgtatgaatgcttgaatgagctgaattgttgttgttgatg 299  Q
    ||||||||||||| ||||||||| ||||||||||  ||||||||||||||| |||| |||||  ||||||||||||||||||||    
T  13323987 aattggaatgaaattagaatatgttggatgaattg-ggaagttttgtatgattgctagaatgctctgaattgttgttgttgatg 13324069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 23370491 - 23370560
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    |||||| | |||||||||||||||||||||| ||||| |||||| ||||||| |||||||||||||||||    
T  23370491 ttgtctatacaattctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaatt 23370560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 24933823 - 24933880
Alignment:
Q  10 caattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 67  Q
    ||||||||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  24933823 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 24933880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 9534382 - 9534328
Alignment:
Q  16 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  9534382 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 9534328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 17240513 - 17240587
Alignment:
Q  16 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt 89  Q
    ||||||||||||| || ||||| |||||| || ||||| |||||||||||||||| ||| ||||||| |||||||    
T  17240513 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattgaattgttctt 17240587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 18929300 - 18929246
Alignment:
Q  16 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    ||||||||||||| || ||||| |||||| |||| ||||||||||||||||||||    
T  18929300 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaatt 18929246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 20247791 - 20247843
Alignment:
Q  18 aggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    ||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  20247791 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 20247843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 24193009 - 24192957
Alignment:
Q  18 aggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    ||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  24193009 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 24192957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 41455097 - 41455149
Alignment:
Q  15 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 67  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  41455097 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 41455149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 16801467 - 16801521
Alignment:
Q  15 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    |||||||||||||| || ||||| |||||| |||| ||||||||||||||||||||    
T  16801467 ctaaggtaagggtgagactatctctcaataatcat-atatataatttctgaaaatt 16801521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 14762758 - 14762812
Alignment:
Q  16 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    ||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  14762758 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 14762812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 299
Target Start/End: Complemental strand, 51301412 - 51301366
Alignment:
Q  253 gaagttttgtatgaatgcttgaatgagctgaattgttgttgttgatg 299  Q
    |||||||||| ||| |||| |||||| ||||||||||||||||||||    
T  51301412 gaagttttgtttgattgctagaatgatctgaattgttgttgttgatg 51301366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 299
Target Start/End: Original strand, 17240753 - 17240794
Alignment:
Q  258 tttgtatgaatgcttgaatgagctgaattgttgttgttgatg 299  Q
    ||||||||| |||| |||||| ||||||||||||||||||||    
T  17240753 tttgtatgattgctagaatgatctgaattgttgttgttgatg 17240794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 206; Significance: 1e-112; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 79476 - 79774
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  79476 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaaattaatcaattaaactgttcttaaggtaaaatt 79575  T
Q  101 gggaaaataagggttaatgatgattttgnnnnnnnnngggtataagaatcaggttt-taatgtcgtactttgatgattagtatgatttcttaatccatgt 199  Q
    ||||||||||||||||||||||||||||          ||| |||||||||||||| |||||| ||| ||  ||||||||||||||||||||||||||||    
T  79576 gggaaaataagggttaatgatgattttgaaagaaaa--ggtgtaagaatcaggtttataatgttgtatttgaatgattagtatgatttcttaatccatgt 79673  T
Q  200 tgttgatgttgatcgtaattggaatgaaaatagaatatgatggatgaattttggaagttttgtatgaatgcttgaatgagctgaattgttgttgttgatg 299  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||| |||||||||||    
T  79674 tgttgatattgatcgtaattgaaatgaaaatagaatatgatggatgaattttggaagttctgtatgaatgcttgattgggctgaattgatgttgttgatg 79773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 202; Significance: 1e-110; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 16146816 - 16147114
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  16146816 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaaattaatcaattaaactgttcttaaggtaaaatt 16146915  T
Q  101 gggaaaataagggttaatgatgattttgnnnnnnnnngggtataagaatcaggttt-taatgtcgtactttgatgattagtatgatttcttaatccatgt 199  Q
     |||||||||||||||||||||||||||          ||| |||||||||||||| |||||| ||| ||  ||||||||||||||||||||||||||||    
T  16146916 tggaaaataagggttaatgatgattttgaaagaaaa--ggtgtaagaatcaggtttataatgttgtatttgaatgattagtatgatttcttaatccatgt 16147013  T
Q  200 tgttgatgttgatcgtaattggaatgaaaatagaatatgatggatgaattttggaagttttgtatgaatgcttgaatgagctgaattgttgttgttgatg 299  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||| |||||||||||    
T  16147014 tgttgatattgatcgtaattgaaatgaaaatagaatatgatggatgaattttggaagttctgtatgaatgcttgattgggctgaattgatgttgttgatg 16147113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 14486713 - 14486602
Alignment:
Q  18 aggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt-aaggtaaaattgggaaaataagggtt 115  Q
    ||||||||||| || |||| ||||||  ||||||||||||||||||||||||||||| ||||||| ||||||| ||| |||||||||||| || ||||||    
T  14486713 aggtaagggtgagactatccttcaatgatcataatatataatttctgaaaattaatcgaattgaattgttcttgaagataaaattgggaatat-agggtt 14486615  T
Q  116 aatgatgattttg 128  Q
     ||||||||||||    
T  14486614 gatgatgattttg 14486602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 27906328 - 27906263
Alignment:
Q  8 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaat 73  Q
    |||||||||||| |||||||||||||||||||||||  ||||||| ||||||||||||||||||||    
T  27906328 tgcaattctaagataagggtgggattatctttcaatgatcataatgtataatttctgaaaattaat 27906263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 53483774 - 53483708
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 67  Q
    ||||||| |||||||||||||||||||| || ||||| |||||| ||||||| ||||||| ||||||    
T  53483774 ttgtcttcgcaattctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa 53483708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 15408196 - 15408140
Alignment:
Q  14 tctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    ||||||||||||||| || ||||| |||||| ||||| |||||||||||||||||||    
T  15408196 tctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaatt 15408140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 11848169 - 11848114
Alignment:
Q  15 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| |||||||||    
T  11848169 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 11848114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 168 - 299
Target Start/End: Complemental strand, 15408041 - 15407911
Alignment:
Q  168 tttgatgattagtatgatttcttaatccatgttgttgatgttgatcgtaattggaatgaaaatagaatatgatggatgaattttggaagttttgtatgaa 267  Q
    ||||||| | || |||||||||||||| ||  ||||| ||| ||||  |||| |||||||| ||||||  | ||||| ||||   ||||||||||||||     
T  15408041 tttgatgttcagaatgatttcttaatctataatgttgctgt-gatcagaatttgaatgaaattagaatcggttggataaattggagaagttttgtatgat 15407943  T
Q  268 tgcttgaatgagctgaattgttgttgttgatg 299  Q
    || | |||||| ||||||||||||| ||||||    
T  15407942 tgttagaatgatctgaattgttgtttttgatg 15407911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 8045832 - 8045884
Alignment:
Q  15 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 67  Q
    |||||||||||||| || ||||| || ||| ||||||| ||||||||||||||    
T  8045832 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaa 8045884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 301
Target Start/End: Complemental strand, 14486459 - 14486431
Alignment:
Q  273 gaatgagctgaattgttgttgttgatgtc 301  Q
    |||||||||||||||||||||||||||||    
T  14486459 gaatgagctgaattgttgttgttgatgtc 14486431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 195; Significance: 1e-106; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 300
Target Start/End: Complemental strand, 21710887 - 21710590
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaatt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21710887 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaatt 21710788  T
Q  101 gggaaaataagggttaatgatgattttgnnnnnnnnngggtataagaatcaggttt-taatgtcgtactttgatgattagtatgatttcttaatccatgt 199  Q
    |||||| | |||||| | ||||||||||           ||||||| ||||||||| ||||||  ||| |||||| ||||||||||| ||||||| ||||    
T  21710787 gggaaatttagggtttaagatgattttgaaagaaaaa--gtataaggatcaggtttataatgttatac-ttgatgtttagtatgattccttaatctatgt 21710691  T
Q  200 tgttgatgttgatcgtaattggaatgaaaatagaatatgatggatgaattttggaagttttgtatgaatgcttgaatgagctgaattgttgttgttgatg 299  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  21710690 tgttgatgttgatcataattggaatgaaaatagaatatgatggatgaattttggaagctttgtatgaatgcttgaatgggctgaattgttgttgttgatg 21710591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 20851118 - 20851416
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaatt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20851118 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaatt 20851217  T
Q  101 gggaaaataagggttaatgatgattttgnnnnnnnnngggtataagaatcaggttt-taatgtcgtactttgatgattagtatgatttcttaatccatgt 199  Q
    |||||| | |||||||| ||||||||||          |||||||| ||||||||| || ||| ||||||||||| ||||||||||||||||||| ||||    
T  20851218 gggaaatttagggttaaggatgattttgaaagaaaa--ggtataaggatcaggtttatattgttgtactttgatgtttagtatgatttcttaatctatgt 20851315  T
Q  200 tgttgatgttgatcgtaattggaatgaaaatagaatatgatggatgaattttggaagttttgtatgaatgcttgaatgagctgaattgttgttgttgatg 299  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||  ||| ||||||||||||||||   |||||| |||||||||||    
T  20851316 tgttgatgctgatcgtaattggaatgaaaatagaatatgatgaatgaattttggaagccttgcatgaatgcttgaatgaatagaattgatgttgttgatg 20851415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 20857745 - 20858043
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaatt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20857745 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaatt 20857844  T
Q  101 gggaaaataagggttaatgatgattttgnnnnnnnnngggtataagaatcaggttt-taatgtcgtactttgatgattagtatgatttcttaatccatgt 199  Q
    |||||| | |||||||| ||||||||||          |||||||| ||||||||| || ||| ||||||||||| |||||||| |||||||||| ||||    
T  20857845 gggaaatttagggttaaggatgattttgaaagaaaa--ggtataaggatcaggtttatattgttgtactttgatgtttagtatgttttcttaatctatgt 20857942  T
Q  200 tgttgatgttgatcgtaattggaatgaaaatagaatatgatggatgaattttggaagttttgtatgaatgcttgaatgagctgaattgttgttgttgatg 299  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||  ||| ||||||||||||||||   |||||| |||||||||||    
T  20857943 tgttgatgctgatcgtaattggaatgaaaatagaatatgatgaatgaattttggaagccttgcatgaatgcttgaatgaatagaattgatgttgttgatg 20858042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 300
Target Start/End: Complemental strand, 21706345 - 21706047
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaatt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21706345 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaatt 21706246  T
Q  101 gggaaaataagggttaatgatgattttgnnnnnnnnngggtataagaatcaggttt-taatgtcgtactttgatgattagtatgatttcttaatccatgt 199  Q
    |||||| | |||||||| ||||||||||          |||||||| ||||||||| || ||| ||||||||||| |||||||| |||||||||| ||||    
T  21706245 gggaaatttagggttaaggatgattttgaaagaaaa--ggtataaggatcaggtttatattgttgtactttgatgtttagtatgttttcttaatctatgt 21706148  T
Q  200 tgttgatgttgatcgtaattggaatgaaaatagaatatgatggatgaattttggaagttttgtatgaatgcttgaatgagctgaattgttgttgttgatg 299  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||  ||| ||||||||||||||||   |||||| |||||||||||    
T  21706147 tgttgatgctgatcgtaattggaatgaaaatagaatatgatgaatgaattttggaagccttgcatgaatgcttgaatgaatagaattgatgttgttgatg 21706048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 68
Target Start/End: Original strand, 20044946 - 20045004
Alignment:
Q  10 caattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 68  Q
    ||||||||||||||||||||||||||| ||||||  || |||||||||| |||||||||    
T  20044946 caattctaaggtaagggtgggattatccttcaatgatcttaatatataaattctgaaaa 20045004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 18712854 - 18712780
Alignment:
Q  16 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt 89  Q
    ||||||| ||||| || ||||| |||||| ||||| ||||||||||||||||||| ||| ||||||| |||||||    
T  18712854 taaggtatgggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttctt 18712780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 20437024 - 20437078
Alignment:
Q  16 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  20437024 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 20437078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 299
Target Start/End: Complemental strand, 32651391 - 32651345
Alignment:
Q  253 gaagttttgtatgaatgcttgaatgagctgaattgttgttgttgatg 299  Q
    |||||||||||||| |||| |||||| ||||||||||||||||||||    
T  32651391 gaagttttgtatgattgctagaatgatctgaattgttgttgttgatg 32651345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 32651627 - 32651573
Alignment:
Q  16 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    ||||||||||||| || ||||| |||||| ||||| |||||||||||||||||||    
T  32651627 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaatt 32651573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 293
Target Start/End: Original strand, 19663670 - 19663794
Alignment:
Q  168 tttgatgattagtatgatttcttaatccatgttgttgatgttgatcgtaattggaatgaaaatagaatatgatggatgaattttggaagttttgtatgaa 267  Q
    ||||||| | || |||||||||||||| ||  ||||| ||| ||||  ||||||||||||| |||||| || ||||| ||||   |||||||||| |||     
T  19663670 tttgatgttcagaatgatttcttaatctataatgttgctgt-gatcagaattggaatgaaattagaatctgttggataaattggagaagttttgtgtgat 19663768  T
Q  268 tgcttgaatgagctgaattgttgttg 293  Q
    || | |||||| ||||||||||||||    
T  19663769 tgttagaatgatctgaattgttgttg 19663794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 41112090 - 41112038
Alignment:
Q  15 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 67  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  41112090 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 41112038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 19663517 - 19663571
Alignment:
Q  16 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    ||||||||||||| || ||||| || ||| ||||| |||||||||||||||||||    
T  19663517 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaatt 19663571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 301
Target Start/End: Complemental strand, 18712615 - 18712570
Alignment:
Q  256 gttttgtatgaatgcttgaatgagctgaattgttgttgttgatgtc 301  Q
    ||||||||||| |||| |||||| | ||||||||||||||||||||    
T  18712615 gttttgtatgattgctagaatgatcagaattgttgttgttgatgtc 18712570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 194; Significance: 1e-105; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 300
Target Start/End: Complemental strand, 16091144 - 16090846
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||| ||||||||||||    
T  16091144 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaagttaatcaattaaactgttcctaaggtaaaatt 16091045  T
Q  101 gggaaaataagggttaatgatgattttgnnnnnnnnngggtataagaatcaggttt-taatgtcgtactttgatgattagtatgatttcttaatccatgt 199  Q
    ||||||||||||||||||||||||||||          ||| |||||||||||||| |||||| ||| ||  ||||||||||||||||||||||||||||    
T  16091044 gggaaaataagggttaatgatgattttgaaagaaaa--ggtgtaagaatcaggtttataatgttgtatttgaatgattagtatgatttcttaatccatgt 16090947  T
Q  200 tgttgatgttgatcgtaattggaatgaaaatagaatatgatggatgaattttggaagttttgtatgaatgcttgaatgagctgaattgttgttgttgatg 299  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||| || ||||||||| |||||||||||    
T  16090946 tgttgatattgatcgtaattgaaatgaaaatagaatatgatggatgaattttggaagttctgaatgaatgcttgattgggctgaattgatgttgttgatg 16090847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 20906447 - 20906743
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaatt 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  20906447 ttgtccttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactattcttaaggtaaaatt 20906546  T
Q  101 gggaaaataagggttaatgatgattttgnnnnnnnnngggtataagaatcaggttt-taatgtcgtactttgatgattagtatgatttcttaatccatgt 199  Q
    |||||  |||||||||||||||||||||          ||||||||||||| |||| |||||| ||||||||||| ||||||||||||||||||| ||||    
T  20906547 gggaat-taagggttaatgatgattttgaaagaaaa--ggtataagaatcaagtttataatgttgtactttgatgtttagtatgatttcttaatctatgt 20906643  T
Q  200 tgttgatgttgatcgtaattggaatgaaaatagaatatgatggatgaattttggaagttttgtatgaatgcttgaatgagctgaattgttgttgttgatg 299  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| ||  ||||||||||| ||||||||||||| |||||||||||||||||||||    
T  20906644 tgttgatgttgatcgtaattgaaatgaaaatagaatatgatggatgaa-ttgagaagttttgtaagaatgcttgaatgggctgaattgttgttgttgatg 20906742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 29181095 - 29181393
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||    
T  29181095 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaaattaatcaattaaactattcttaaggtaaaatt 29181194  T
Q  101 gggaaaataagggttaatgatgattttgnnnnnnnnngggtataagaatcagg-ttttaatgtcgtactttgatgattagtatgatttcttaatccatgt 199  Q
     |||||||||||||||||||||||||||          ||| ||||||||||| || |||||| ||| ||  ||||||||||||||||||||||||||||    
T  29181195 tggaaaataagggttaatgatgattttgaaagaaaa--ggtgtaagaatcaggcttataatgttgtatttgaatgattagtatgatttcttaatccatgt 29181292  T
Q  200 tgttgatgttgatcgtaattggaatgaaaatagaatatgatggatgaattttggaagttttgtatgaatgcttgaatgagctgaattgttgttgttgatg 299  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||| |||||||||||    
T  29181293 tgttgatattgatcgtaattgaaatgaaaatagaatatgatggatgaattttggaagttctgtatgaatgcttgattgggctgaattgatgttgttgatg 29181392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 139 - 300
Target Start/End: Complemental strand, 2966898 - 2966736
Alignment:
Q  139 ggtataagaatcaggtttt-aatgtcgtactttgatgattagtatgatttcttaatccatgttgttgatgttgatcgtaattggaatgaaaatagaatat 237  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2966898 ggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatccatgttgttgatgttgatcgtaattggaatgaaaatagaatat 2966799  T
Q  238 gatggatgaattttggaagttttgtatgaatgcttgaatgagctgaattgttgttgttgatgt 300  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  2966798 gatggatgaattttggaagttttgtatgaatgcttgaatgggctgaattgttgttgttgatgt 2966736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 2971323 - 2971209
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  2971323 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatttataatttctgaaaattaatcaattgaactgttcttaaggtaaaatt 2971224  T
Q  101 gggaaaataagggtt 115  Q
    ||||| |||||||||    
T  2971223 gggaagataagggtt 2971209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 300
Target Start/End: Complemental strand, 2465427 - 2465135
Alignment:
Q  4 tctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattggg 103  Q
    ||||||||||||||||||||||||||||| ||| ||||||| | ||||||||| ||||||||||||||| ||||| ||||||| ||| ||||||| | ||    
T  2465427 tctttgcaattctaaggtaagggtgggatcatccttcaataatgataatatatgatttctgaaaattaagcaatttaactgtttttatggtaaaaattgg 2465328  T
Q  104 aaaataagggttaatgatgattttgnnnnnnnnngggtataagaatcaggttt-taatgtcgtactttgatgattagtatgatttcttaatccatgttgt 202  Q
     |||| ||||||||||   ||||||           || ||||| | |||||| ||||||  || ||||||||||| ||||||||| || ||  | ||||    
T  2465327 gaaattagggttaatggcaattttgaagaaaat---gtgtaagatttaggtttataatgttata-tttgatgattaatatgatttcctactctgtattgt 2465232  T
Q  203 tgatgttgatcgtaattggaatgaaaatagaatatgatggatgaa-ttttggaagttttgtatgaatgcttgaatgagctgaattgttgttgttgatgt 300  Q
    ||||||||||| ||||||| |||||  |||||||| ||||||||| ||||| ||||| || ||||||| |||| |    ||||||||||||||||||||    
T  2465231 tgatgttgatcataattgg-atgaaggtagaatataatggatgaagttttgaaagttctgaatgaatg-ttgatttgaatgaattgttgttgttgatgt 2465135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 31155463 - 31155396
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 68  Q
    |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||    
T  31155463 ttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaa 31155396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 14319615 - 14319688
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc 74  Q
    |||||||||||||||||||||||||||||||||||||||||||  |  |||| |||||||||||||||||||||    
T  14319615 ttgtctttgcaattctaaggtaagggtgggattatctttcaatgattttaatgtataatttctgaaaattaatc 14319688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 3857357 - 3857447
Alignment:
Q  7 ttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaa 98  Q
    |||||||||||||||||||||||||| ||||| ||||| | ||||||||| ||||||||||||||| ||||| ||||||| ||| |||||||    
T  3857357 ttgcaattctaaggtaagggtgggatcatctt-caataatgataatatatgatttctgaaaattaagcaatttaactgtttttatggtaaaa 3857447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 14230850 - 14230777
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc 74  Q
    |||||||||||||||||||||||||||||||||||||||||||     |||| |||||||||||||||||||||    
T  14230850 ttgtctttgcaattctaaggtaagggtgggattatctttcaatgaatttaatgtataatttctgaaaattaatc 14230777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 21231125 - 21231242
Alignment:
Q  181 atgatttcttaatccatgttgttgatgttgatcgtaattggaatgaaaatagaatatgatggatgaattttggaagttttgtatgaatgcttgaatgagc 280  Q
    |||||||||||||| ||  ||||| ||| ||||  |||| |||||||| |||||| || ||||| ||||   |||||||||||||| |||| |||||| |    
T  21231125 atgatttcttaatctataatgttgttgt-gatcagaatttgaatgaaattagaatctgttggataaattggagaagttttgtatgattgctagaatgatc 21231223  T
Q  281 tgaattgttgttgttgatg 299  Q
    |||||||||||||||||||    
T  21231224 tgaattgttgttgttgatg 21231242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 11382871 - 11382925
Alignment:
Q  16 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    ||||||||||||| || ||||| |||||| |||||||||||||||||||||||||    
T  11382871 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaatt 11382925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 11389348 - 11389402
Alignment:
Q  16 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    ||||||||||||| || ||||| |||||| |||||||||||||||||||||||||    
T  11389348 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaatt 11389402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 21230952 - 21231014
Alignment:
Q  8 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    ||||| ||||||||||||||| || ||||| |||||| ||||| |||||||||||||||||||    
T  21230952 tgcaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaatt 21231014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 14423040 - 14422985
Alignment:
Q  15 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  14423040 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 14422985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 16009631 - 16009577
Alignment:
Q  16 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  16009631 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 16009577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 299
Target Start/End: Original strand, 3857516 - 3857647
Alignment:
Q  168 tttgatgattagtatgatttcttaatccatgttgttgatgttgatcgtaattggaatgaaaatagaatatgatggatgaa-ttttggaagttttgtatga 266  Q
    ||||||||||| ||||||||| || ||  | ||||||||||||||  ||||||| |||||  |||||||| || |||||| ||||| ||||| || ||||    
T  3857516 tttgatgattaatatgatttcctactctgtattgttgatgttgattataattgg-atgaaggtagaatataatagatgaagttttgaaagttctgaatga 3857614  T
Q  267 atgcttgaatgagctgaattgttgttgttgatg 299  Q
    ||| |||| |    |||||||||||||||||||    
T  3857615 atgtttgatttgaatgaattgttgttgttgatg 3857647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 12590643 - 12590695
Alignment:
Q  15 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 67  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  12590643 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 12590695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 13007487 - 13007435
Alignment:
Q  15 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 67  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  13007487 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 13007435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 20311050 - 20311106
Alignment:
Q  14 tctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    ||||||||||||||| || ||||| |||||| ||||||  |||||||||||||||||    
T  20311050 tctaaggtaagggtgagactatctctcaataatcataacgtataatttctgaaaatt 20311106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 13679548 - 13679494
Alignment:
Q  16 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    ||||||||||||| || |||||||||||  |||| ||||||||||| ||||||||    
T  13679548 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaatt 13679494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 15168230 - 15168176
Alignment:
Q  16 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    ||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  15168230 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 15168176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 12709843 - 12709895
Alignment:
Q  15 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 67  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| ||||||    
T  12709843 ctaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa 12709895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 13122914 - 13122966
Alignment:
Q  15 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 67  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| ||||||    
T  13122914 ctaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa 13122966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 13743764 - 13743712
Alignment:
Q  15 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 67  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| ||||||    
T  13743764 ctaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa 13743712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 16677348 - 16677296
Alignment:
Q  18 aggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    ||||||||||| || ||||| |||||| ||||||| |||||||||| ||||||    
T  16677348 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaatt 16677296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 17651584 - 17651532
Alignment:
Q  18 aggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    ||||||||||| || ||||| |||||| ||||||| |||||||||| ||||||    
T  17651584 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaatt 17651532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 299
Target Start/End: Original strand, 49956 - 50254
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggt-aaaat 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||| |||||    
T  49956 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctaaaaattaatcaattaaactgttcttaaggtaaaaat 50055  T
Q  100 tgggaaaataagggttaatgatgattttgnnnnnnnnngggtataagaatcaggttt-taatgtcgtactttgatgattagtatgatttcttaatccatg 198  Q
    |||||||||||||||||||||||||||||          ||| |||||||||||||| ||||||  || ||  | |||||||||||||||||||||||||    
T  50056 tgggaaaataagggttaatgatgattttgaaagaaaa--ggtgtaagaatcaggtttataatgttatatttgaaagattagtatgatttcttaatccatg 50153  T
Q  199 ttgttgatgttgatcgtaattggaatgaaaatagaatatgatggatgaattttggaagttttgtatgaatgcttgaatgagctgaattgttgttgttgat 298  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||| ||||||||||    
T  50154 ttgttgatattgatcgtaattgaaatgaaaatagaatatgatggatgaattttggaagttctgtatgaatgcttgattgggctgaattgatgttgttgat 50253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 186; Significance: 1e-101; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 24320656 - 24320954
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaatt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24320656 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaatt 24320755  T
Q  101 gggaaaataagggttaatgatgattttgnnnnnnnnngggtataagaatcaggttt-taatgtcgtactttgatgattagtatgatttcttaatccatgt 199  Q
    |||||| | |||||||| ||||||||||          |||||| | ||||||||| || ||| ||||||||||| ||||||||||||||||||| ||||    
T  24320756 gggaaatttagggttaaggatgattttgaaagaaaa--ggtatagggatcaggtttatattgttgtactttgatgtttagtatgatttcttaatctatgt 24320853  T
Q  200 tgttgatgttgatcgtaattggaatgaaaatagaatatgatggatgaattttggaagttttgtatgaatgcttgaatgagctgaattgttgttgttgatg 299  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||  ||| ||||||||||||||||   |||||| |||||||||||    
T  24320854 tgttgatgctgatcgtaattggaatgaaaatagaatatgatgaatgaattttggaagccttgcatgaatgcttgaatgaatagaattgatgttgttgatg 24320953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 16 - 299
Target Start/End: Original strand, 29643386 - 29643668
Alignment:
Q  16 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaa-ttgaactgttctt-aaggtaaaattgggaaaataaggg 113  Q
    ||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||| ||||| ||||| | ||| |||||||| |||  ||||||    
T  29643386 taaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaattaatcaaattgaattgttcatgaagataaaattgagaat-taaggg 29643484  T
Q  114 ttaatgatgattttgnnnnnnnnngggtataagaatcaggttt-taatgtcgtactttgatgattagtatgatttcttaatccatgttgttgatgttgat 212  Q
    || |||||||||| |          ||| |||||||  ||||  |  ||| ||| |||| || | ||||||||||||||||| ||  |||||||  ||||    
T  29643485 ttgatgatgatttaggaaggatt--ggtgtaagaattgggttaattgtgttgtaatttggtgttcagtatgatttcttaatctataatgttgattgtgat 29643582  T
Q  213 cgtaattggaatgaaaatagaatatgatggatgaattttggaagttttgtatgaatgcttgaatgagctgaattgttgttgttgatg 299  Q
    |  ||||||||||||||||||||||| |||||||||| | |||||||||||||| |||| |||||  |||||||||||||| |||||    
T  29643583 cagaattggaatgaaaatagaatatgttggatgaattgt-gaagttttgtatgattgctagaatgctctgaattgttgttgatgatg 29643668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 44477692 - 44477623
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    |||||||  ||||||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  44477692 ttgtcttcacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 44477623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 44492850 - 44492781
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    |||||||  ||||||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  44492850 ttgtcttcacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 44492781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 18614327 - 18614240
Alignment:
Q  16 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaat-caattgaactgttctt-aaggtaaaattg 101  Q
    ||||||||||||| || ||||| |||||| |||| |||||||||||||||||||| || |||||||| ||||||| ||| ||||||||    
T  18614327 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatccaattgaattgttcttgaagataaaattg 18614240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 23482053 - 23482127
Alignment:
Q  16 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt 89  Q
    ||||||||||||| || ||||| |||||| ||||| ||||||||||||||||||| ||| ||||||| |||||||    
T  23482053 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttctt 23482127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 8727735 - 8727787
Alignment:
Q  18 aggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    ||||||||||| |||||||  |||||| ||||||| |||||||||||||||||    
T  8727735 aggtaagggtgagattatccctcaataatcataatctataatttctgaaaatt 8727787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 216 - 299
Target Start/End: Complemental strand, 25111833 - 25111750
Alignment:
Q  216 aattggaatgaaaatagaatatgatggatgaattttggaagttttgtatgaatgcttgaatgagctgaattgttgttgttgatg 299  Q
    |||| |||||||| ||||||  | ||||| ||||   |||||||||||||| || | |||||| ||||||||||||||||||||    
T  25111833 aatttgaatgaaattagaatcggttggataaattggagaagttttgtatgattgttggaatgatctgaattgttgttgttgatg 25111750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 299
Target Start/End: Original strand, 14056799 - 14056845
Alignment:
Q  253 gaagttttgtatgaatgcttgaatgagctgaattgttgttgttgatg 299  Q
    |||||||||||||| || | |||||| ||||||||||||||||||||    
T  14056799 gaagttttgtatgattgttagaatgatctgaattgttgttgttgatg 14056845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 23866670 - 23866618
Alignment:
Q  15 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 67  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| ||||||    
T  23866670 ctaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa 23866618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 186; Significance: 1e-101; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 300
Target Start/End: Complemental strand, 10646 - 10348
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaatt 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10646 ttgtctttgaaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaattgttcttaaggtaaaatt 10547  T
Q  101 gggaaaataagggttaatgatgattttgnnnnnnnnngggtataagaatcaggttt-taatgtcgtactttgatgattagtatgatttcttaatccatgt 199  Q
    |||||| | |||||||| ||||||||||          |||||| | || |||||| || ||| ||||||||||| ||||||||||||||||||| ||||    
T  10546 gggaaatttagggttaaggatgattttgaaagaaaa--ggtatagggataaggtttatattgttgtactttgatgtttagtatgatttcttaatctatgt 10449  T
Q  200 tgttgatgttgatcgtaattggaatgaaaatagaatatgatggatgaattttggaagttttgtatgaatgcttgaatgagctgaattgttgttgttgatg 299  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| | |||||| |||||||||||    
T  10448 tgttgatgctgatcgtaattggaatgaaaatagaatatgatggatgaattttggaagctttgcatgaatgcttgaatgaaccgaattgatgttgttgatg 10349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 25180915 - 25181174
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaatt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25180915 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaatt 25181014  T
Q  101 gggaaaataagggttaatgatgattttgnnnnnnnnngggtataagaatcaggttt-taatgtcgtactttgatgattagtatgatttcttaatccatgt 199  Q
    |||||| | |||||||| ||||||||||          ||||||   ||||||||| || | | ||||||||||| ||||||||||||||||||| ||||    
T  25181015 gggaaatttagggttaaggatgattttgaaagaaaa--ggtatattgatcaggtttatatttttgtactttgatgtttagtatgatttcttaatctatgt 25181112  T
Q  200 tgttgatgttgatcgtaattggaatgaaaatagaatatgatggatgaattttggaagttttg 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25181113 tgttgatgttgatcgtaattggaatgaaaatagaatatgatggatgaattttggaagctttg 25181174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 26885251 - 26885179
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc 74  Q
    |||||| ||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||    
T  26885251 ttgtctctgcaattctaaggtaagggtgggattatctttcaataatc-taatgtataatttctgaaaattaatc 26885179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 27207705 - 27207778
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc 74  Q
    |||||||||||||||||||||||||||||||||||||||||||  |  |||| |||||||||||||||||||||    
T  27207705 ttgtctttgcaattctaaggtaagggtgggattatctttcaatgattttaatgtataatttctgaaaattaatc 27207778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 23168291 - 23168351
Alignment:
Q  8 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 68  Q
    |||||||||||||||||||||||||||||||||| |  ||||||| |||||||||||||||    
T  23168291 tgcaattctaaggtaagggtgggattatctttcattgatcataatgtataatttctgaaaa 23168351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 23579548 - 23579608
Alignment:
Q  8 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 68  Q
    |||||||||||||||||||||||||||||||||| |  ||||||| |||||||||||||||    
T  23579548 tgcaattctaaggtaagggtgggattatctttcattgatcataatgtataatttctgaaaa 23579608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 23265197 - 23265123
Alignment:
Q  16 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt 89  Q
    ||||||||||||| || ||||| |||||| ||||| ||||||||||||||||||| ||| ||||||| |||||||    
T  23265197 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttctt 23265123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 23280265 - 23280191
Alignment:
Q  16 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt 89  Q
    ||||||||||||| || ||||| |||||| ||||| ||||||||||||||||||| ||| ||||||| |||||||    
T  23280265 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttctt 23280191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 5706009 - 5706075
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 67  Q
    ||||||| |||||||||||||||||||| || ||||| ||| || ||||||| ||||||| ||||||    
T  5706009 ttgtcttcgcaattctaaggtaagggtgagactatctctcattaatcataatctataattcctgaaa 5706075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 6483772 - 6483718
Alignment:
Q  16 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  6483772 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 6483718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 6487239 - 6487185
Alignment:
Q  16 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  6487239 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 6487185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 21908414 - 21908360
Alignment:
Q  16 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    ||||||||||||| || ||||| |||||| |||| ||||||||||||||||||||    
T  21908414 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaatt 21908360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 26583882 - 26583830
Alignment:
Q  15 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 67  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  26583882 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 26583830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 27366534 - 27366566
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggatt 33  Q
    |||||||||||||||||||||||||||| ||||    
T  27366534 ttgtctttgcaattctaaggtaagggtgagatt 27366566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 172; Significance: 2e-92; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 300
Target Start/End: Complemental strand, 22461225 - 22460927
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg-aaaattaatcaattgaactgttcttaaggtaaaat 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  22461225 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaaattaatcaattgaactgttcttaaggtaaaat 22461126  T
Q  100 tgggaaaataagggttaatgatgattttgnnnnnnnnngggtataagaatcaggttt-taatgtcgtactttgatgattagtatgatttcttaatccatg 198  Q
    ||||||| | |||||||| ||||||||            |||||||| ||||||||| || ||||||||||||||| |||||||| ||||||| || |||    
T  22461125 tgggaaatttagggttaaggatgattt---gaaagaaaaggtataaggatcaggtttatattgtcgtactttgatgtttagtatgttttcttattctatg 22461029  T
Q  199 ttgttgatgttgatcgtaattggaatgaaaatagaatatgatggatgaattttggaagttttgtatgaatgcttgaatgagctgaattgttgttgttgat 298  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||  ||| ||||||||||||||||   |||||| ||||||||||    
T  22461028 ttgttgatgctgatcgtaattggaatgaaaatagaatatgatgaatgaattttggaagccttgcatgaatgcttgaatgaatagaattgatgttgttgat 22460929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 1 - 300
Target Start/End: Complemental strand, 19236969 - 19236672
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaatt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19236969 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaatt 19236870  T
Q  101 gggaaaataagggttaatgatgattttgnnnnnnnnngggtataagaatcaggttt-taatgtcgtactttgatgattagtatgatttcttaatccatgt 199  Q
    |||||| | |||||||| ||||||||||          |||||||| ||||||||| || ||| ||||||||| | ||||||||  ||||||||| ||||    
T  19236869 gggaaatttagggttaaggatgattttgaaagaaaa--ggtataaggatcaggtttatattgttgtactttga-gtttagtatgtgttcttaatctatgt 19236773  T
Q  200 tgttgatgttgatcgtaattggaatgaaaatagaatatgatggatgaattttggaagttttgtatgaatgcttgaatgagctgaattgttgttgttgatg 299  Q
    |||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||  ||| ||||||||||||||||   |||||| |||||||||||    
T  19236772 tgttgatgctgatcgtaattggaatgaaaatagagtatgatgaatgaattttggaagccttgcatgaatgcttgaatgaatagaattgatgttgttgatg 19236673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 1 - 300
Target Start/End: Complemental strand, 22467849 - 22467551
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg-aaaattaatcaattgaactgttcttaaggtaaaat 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  22467849 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaaattaatcaattgaactgttcttaaggtaaaat 22467750  T
Q  100 tgggaaaataagggttaatgatgattttgnnnnnnnnngggtataagaatcaggttt-taatgtcgtactttgatgattagtatgatttcttaatccatg 198  Q
    ||||||| | |||||||| ||||||||            |||||||| ||||||||| || ||||||||||||||| |||||||| ||||||| || |||    
T  22467749 tgggaaatttagggttaaggatgattt---gaaagaaaaggtataaggatcaggtttatattgtcgtactttgatgtttagtatgttttcttattctatg 22467653  T
Q  199 ttgttgatgttgatcgtaattggaatgaaaatagaatatgatggatgaattttggaagttttgtatgaatgcttgaatgagctgaattgttgttgttgat 298  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||  ||| |||||| |||||||||   |||||| ||||||||||    
T  22467652 ttgttgatgctgatcgtaattggaatgaaaatagaatatgatgaatgaattttggaagccttgcatgaattcttgaatgaatagaattgatgttgttgat 22467553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 4 - 300
Target Start/End: Complemental strand, 20773035 - 20772742
Alignment:
Q  4 tctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattggg 103  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  20773035 tctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttctgaaaattaatcaatttaactgttcttaaggtaaaattggg 20772936  T
Q  104 aaaataagggttaatgatgattttgnnnnnnnnngggtataagaatcaggttt-taatgtcgtactttgatgattagtatgatttcttaatccatgttgt 202  Q
    ||| | |||||||||||||||||||           || |||||||||||||| |||||| ||| ||||||||||||||||||||| || || || ||||    
T  20772935 aaatttagggttaatgatgattttgaagaaaat---gtgtaagaatcaggtttataatgttgta-tttgatgattagtatgatttcctactctatattgt 20772840  T
Q  203 tgatgttgatcgtaattggaatgaaaatagaatatgatggatgaa-ttttggaagttttgtatgaatgcttgaatgagctgaattgttgttgttgatgt 300  Q
    ||||||||||| ||||||| |||||| |||||||| ||||||||| ||||||||||| || ||||||| |||| ||   | ||||||||||||||||||    
T  20772839 tgatgttgatcataattgg-atgaaagtagaatataatggatgaagttttggaagttctgaatgaatgtttgattggagttaattgttgttgttgatgt 20772742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 4 - 300
Target Start/End: Complemental strand, 20781810 - 20781517
Alignment:
Q  4 tctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattggg 103  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  20781810 tctttgcaattctaaggtaagggtgggattatctttcaataattataatatatgatttctgaaaattaatcaatttaactgttcttaaggtaaaattggg 20781711  T
Q  104 aaaataagggttaatgatgattttgnnnnnnnnngggtataagaatcaggttt-taatgtcgtactttgatgattagtatgatttcttaatccatgttgt 202  Q
    ||| | |||||||||||||||||||           || |||||||||||||| |||||| ||| ||||||||||| ||||||||| || || || ||||    
T  20781710 aaatttagggttaatgatgattttgaagaaaat---gtgtaagaatcaggtttataatgttgta-tttgatgattattatgatttcctactctatattgt 20781615  T
Q  203 tgatgttgatcgtaattggaatgaaaatagaatatgatggatgaa-ttttggaagttttgtatgaatgcttgaatgagctgaattgttgttgttgatgt 300  Q
    ||||||||||| ||||||| |||||| |||||||| ||||||||| ||||||||||| || ||||||| |||| ||   | ||||||||||||||||||    
T  20781614 tgatgttgatcataattgg-atgaaagtagaatataatggatgaagttttggaagttctgaatgaatgtttgattggagttaattgttgttgttgatgt 20781517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 4 - 299
Target Start/End: Original strand, 24929917 - 24930211
Alignment:
Q  4 tctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa-ttaatcaattgaactgttcttaaggtaaaattgg 102  Q
    ||||| |||||||||||||||||||||||||||||||||||||  |||||||| |||||| |||| |||||||||| |||||||||||||||||||||||    
T  24929917 tctttacaattctaaggtaagggtgggattatctttcaatagttctaatatatgatttctaaaaaattaatcaatttaactgttcttaaggtaaaattgg 24930016  T
Q  103 gaaaataagggttaatgatgattttgnnnnnnnnngggtataagaatcaggttt-taatgtcgtactttgatgattagtatgatttcttaatccatgttg 201  Q
    |||| | |||||||||||||||| ||           || |||||||||||||| |||||| ||| ||||||||||||||||||||| ||||| ||  ||    
T  24930017 gaaatttagggttaatgatgattctgaaggaaat---gtgtaagaatcaggtttataatgttgta-tttgatgattagtatgatttcctaatctataatg 24930112  T
Q  202 ttgatgttgatcgtaa-ttggaatgaaaatagaatatgatggatgaattttggaagttttgtatgaatgcttgaatgagctgaattgttgttgttgatg 299  Q
    ||||| |||||| ||| ||||| ||||||||||||||||| ||||||| ||||||||| || ||||||| |||| ||   | |||||||||||||||||    
T  24930113 ttgatattgatcataatttggagtgaaaatagaatatgatagatgaatgttggaagttctgaatgaatgtttgattggagttaattgttgttgttgatg 24930211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 20820279 - 20820159
Alignment:
Q  7 ttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaa 106  Q
    |||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||  |||||  |||| ||| ||||||||||||||||| |||||    
T  20820279 ttgcaattctaaggtaagggtgggatcatctttcaatagtgttaatatataatttctgatgattaagtaattcaaccgttcttaaggtaaaatt-ggaaa 20820181  T
Q  107 ataagggttaatgatgattttg 128  Q
    || |||||||||||||||||||    
T  20820180 attagggttaatgatgattttg 20820159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 20827379 - 20827259
Alignment:
Q  7 ttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaa 106  Q
    |||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||  |||||  |||| ||| ||||||||||||||||| |||||    
T  20827379 ttgcaattctaaggtaagggtgggatcatctttcaatagtgttaatatataatttctgatgattaagtaattcaaccgttcttaaggtaaaatt-ggaaa 20827281  T
Q  107 ataagggttaatgatgattttg 128  Q
    || |||||||||||||||||||    
T  20827280 attagggttaatgatgattttg 20827259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 28909275 - 28909403
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggt-aaaat 99  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||| ||| ||||| ||||||||||||||| | ||| || |||||||||||| |||||    
T  28909275 ttgtcgttgcaattctaaggtaagggtgggatcatctttcaatagtgatattatatgatttctgaaaattaaactatttaattgttcttaaggtaaaaat 28909374  T
Q  100 tgggaaaataagggttaatgatgattttg 128  Q
    ||||||||| ||| || ||||||||||||    
T  28909375 tgggaaaattaggtttgatgatgattttg 28909403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 28945670 - 28945798
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggt-aaaat 99  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||| ||| ||||| ||||||||||||||| | ||| || |||||||||||| |||||    
T  28945670 ttgtcgttgcaattctaaggtaagggtgggatcatctttcaatagtgatattatatgatttctgaaaattaaactatttaattgttcttaaggtaaaaat 28945769  T
Q  100 tgggaaaataagggttaatgatgattttg 128  Q
    ||||||||| ||| || ||||||||||||    
T  28945770 tgggaaaattaggtttgatgatgattttg 28945798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 28889329 - 28889451
Alignment:
Q  7 ttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggt-aaaattgggaa 105  Q
    |||||||||||||||||||||||||| ||||||||||||| ||| ||||| ||||||||||||||| | ||| || |||||||||||| |||||||||||    
T  28889329 ttgcaattctaaggtaagggtgggatcatctttcaatagtgatattatatgatttctgaaaattaaactatttaattgttcttaaggtaaaaattgggaa 28889428  T
Q  106 aataagggttaatgatgattttg 128  Q
    ||| ||| || ||||||||||||    
T  28889429 aattaggtttgatgatgattttg 28889451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 28896033 - 28896155
Alignment:
Q  7 ttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggt-aaaattgggaa 105  Q
    |||||||||||||||||||||||||| ||||||||||||| ||| ||||| ||||||||||||||| | ||| || |||||||||||| |||||||||||    
T  28896033 ttgcaattctaaggtaagggtgggatcatctttcaatagtgatattatatgatttctgaaaattaaactatttaattgttcttaaggtaaaaattgggaa 28896132  T
Q  106 aataagggttaatgatgattttg 128  Q
    ||| ||| || ||||||||||||    
T  28896133 aattaggtttgatgatgattttg 28896155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 28924859 - 28924981
Alignment:
Q  7 ttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggt-aaaattgggaa 105  Q
    |||||||||||||||||||||||||| ||||||||||||| ||| ||||| ||||||||||||||| | ||| || |||||||||||| |||||||||||    
T  28924859 ttgcaattctaaggtaagggtgggatcatctttcaatagtgatattatatgatttctgaaaattaaactatttaattgttcttaaggtaaaaattgggaa 28924958  T
Q  106 aataagggttaatgatgattttg 128  Q
    ||| ||| || ||||||||||||    
T  28924959 aattaggtttgatgatgattttg 28924981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 18407944 - 18408018
Alignment:
Q  16 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt 89  Q
    ||||||||||||| || ||||| |||||| ||||||||||||||||||||||||| ||| ||||||| |||||||    
T  18407944 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattgatctaattgaattgttctt 18408018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 34830146 - 34830081
Alignment:
Q  8 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc 74  Q
    ||||||||||||||||||||||||||||||||||||| |  |||| |||||||||||||||| ||||    
T  34830146 tgcaattctaaggtaagggtgggattatctttcaataat-ttaatgtataatttctgaaaatcaatc 34830081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 23111200 - 23111274
Alignment:
Q  16 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt 89  Q
    ||||||||||||| || ||||| |||||| ||||| ||||||||||||||||||| ||| ||||||| |||||||    
T  23111200 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttctt 23111274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 22438746 - 22438802
Alignment:
Q  14 tctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    ||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  22438746 tctaaggtaagggtgagactatctctcaataatcataatgtataatttctgaaaatt 22438802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 38144536 - 38144591
Alignment:
Q  15 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  38144536 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 38144591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 19512441 - 19512387
Alignment:
Q  16 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  19512441 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 19512387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 28370055 - 28370109
Alignment:
Q  16 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  28370055 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 28370109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 23528686 - 23528634
Alignment:
Q  15 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 67  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  23528686 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 23528634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 300
Target Start/End: Original strand, 28889488 - 28889619
Alignment:
Q  168 tttgatgattagtatgatttcttaatccatgttgttgatgttgatcgtaattggaatgaaaatagaatatgatggatgaattttggaagttttgtatgaa 267  Q
    ||| ||||||||||||||||| |||||  | | | || |||||||| |||||||| |||||| || || | ||| |||||||| |||  || ||||||||    
T  28889488 tttaatgattagtatgatttcctaatctgtatcgctgttgttgatcataattgga-tgaaaagagcatgttatgtatgaatttgggattttctgtatgaa 28889586  T
Q  268 tgcttgaatgagctgaattgttgttgttgatgt 300  Q
    ||| ||| || |||| |||||||||||| ||||    
T  28889587 tgcctgattgggctggattgttgttgttaatgt 28889619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 300
Target Start/End: Original strand, 28896192 - 28896323
Alignment:
Q  168 tttgatgattagtatgatttcttaatccatgttgttgatgttgatcgtaattggaatgaaaatagaatatgatggatgaattttggaagttttgtatgaa 267  Q
    ||| ||||||||||||||||| |||||  | | | || |||||||| |||||||| |||||| || || | ||| |||||||| |||  || ||||||||    
T  28896192 tttaatgattagtatgatttcctaatctgtatcgctgttgttgatcataattgga-tgaaaagagcatgttatgtatgaatttgggattttctgtatgaa 28896290  T
Q  268 tgcttgaatgagctgaattgttgttgttgatgt 300  Q
    ||| ||| || |||| |||||||||||| ||||    
T  28896291 tgcctgattgggctggattgttgttgttaatgt 28896323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 300
Target Start/End: Original strand, 28909440 - 28909571
Alignment:
Q  168 tttgatgattagtatgatttcttaatccatgttgttgatgttgatcgtaattggaatgaaaatagaatatgatggatgaattttggaagttttgtatgaa 267  Q
    ||| ||||||||||||||||| |||||  | | | || |||||||| |||||||| |||||| || || | ||| |||||||| |||  || ||||||||    
T  28909440 tttaatgattagtatgatttcctaatctgtatcgctgttgttgatcataattgga-tgaaaagagcatgttatgtatgaatttgggattttctgtatgaa 28909538  T
Q  268 tgcttgaatgagctgaattgttgttgttgatgt 300  Q
    ||| ||| || |||| |||||||||||| ||||    
T  28909539 tgcctgattgggctggattgttgttgttaatgt 28909571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 300
Target Start/End: Original strand, 28925018 - 28925149
Alignment:
Q  168 tttgatgattagtatgatttcttaatccatgttgttgatgttgatcgtaattggaatgaaaatagaatatgatggatgaattttggaagttttgtatgaa 267  Q
    ||| ||||||||||||||||| |||||  | | | || |||||||| |||||||| |||||| || || | ||| |||||||| |||  || ||||||||    
T  28925018 tttaatgattagtatgatttcctaatctgtatcgctgttgttgatcataattgga-tgaaaagagcatgttatgtatgaatttgggattttctgtatgaa 28925116  T
Q  268 tgcttgaatgagctgaattgttgttgttgatgt 300  Q
    ||| ||| || |||| |||||||||||| ||||    
T  28925117 tgcctgattgggctggattgttgttgttaatgt 28925149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 300
Target Start/End: Original strand, 28931136 - 28931263
Alignment:
Q  172 atgattagtatgatttcttaatccatgttgttgatgttgatcgtaattggaatgaaaatagaatatgatggatgaattttggaagttttgtatgaatgct 271  Q
    ||||||||||||||||| |||||  | | | || |||||||| |||||||| |||||| || || | ||| |||||||| |||  || |||||||||||     
T  28931136 atgattagtatgatttcctaatctgtatcgctgttgttgatcataattgga-tgaaaagagcatgttatgtatgaatttgggattttctgtatgaatgcc 28931234  T
Q  272 tgaatgagctgaattgttgttgttgatgt 300  Q
    ||| || |||| |||||||||||| ||||    
T  28931235 tgattgggctggattgttgttgttaatgt 28931263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 300
Target Start/End: Original strand, 28945835 - 28945966
Alignment:
Q  168 tttgatgattagtatgatttcttaatccatgttgttgatgttgatcgtaattggaatgaaaatagaatatgatggatgaattttggaagttttgtatgaa 267  Q
    ||| ||||||||||||||||| |||||  | | | || |||||||| |||||||| |||||| || || | ||| |||||||| |||  || ||||||||    
T  28945835 tttaatgattagtatgatttcctaatctgtatcgctgttgttgatcataattgga-tgaaaagagcatgttatgtatgaatttgggattttctgtatgaa 28945933  T
Q  268 tgcttgaatgagctgaattgttgttgttgatgt 300  Q
    ||| ||| || |||| |||||||||||| ||||    
T  28945934 tgcctgattgggctggattgttgttgttaatgt 28945966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 299
Target Start/End: Original strand, 23111436 - 23111482
Alignment:
Q  253 gaagttttgtatgaatgcttgaatgagctgaattgttgttgttgatg 299  Q
    |||||||||||||| |||| |||||  ||||||||||||||||||||    
T  23111436 gaagttttgtatgattgctagaatggtctgaattgttgttgttgatg 23111482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 163; Significance: 4e-87; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 300
Target Start/End: Complemental strand, 135507 - 135211
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttctt-aaggtaaaat 99  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  135507 ttgtctttgcaattctaaggtaagcgtgagattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaaggtaaaat 135408  T
Q  100 tgggaaaataagggttaatgatgattttgnnnnnnnnngggtataagaatcaggttt-taatgtcgtactttgatgattagtatgatttcttaatccatg 198  Q
    || | || |||||||||||||||||||||          ||| |||||||||||||| |  ||| ||| ||||||| ||||||||||||||||||| |||    
T  135407 tgag-aattaagggttaatgatgattttgaaagaaaa--ggtgtaagaatcaggtttattgtgttgtaatttgatg-ttagtatgatttcttaatctatg 135312  T
Q  199 ttgttgatgttgatcgtaattggaatgaaaatagaatatgatggatgaattttggaagttttgtatgaatgcttgaatgagctgaattgttgttgttgat 298  Q
    ||||||||  |||||  |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||    
T  135311 ttgttgatcgtgatcaaaattggaatgaaaatagaatatgatggatgaa-ttgggaagttttgtatgaatgcttgaatgggctgaattgttgttgttgat 135213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 163; Significance: 4e-87; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 20007932 - 20008231
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg-aaaattaatcaattgaactgttcttaaggtaaaat 99  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  20007932 ttgtctttgcaattctaaggtaagggtgggatcatctttcaatagtcataatatataatttatgaaaaattaatcaattgaactgttcttaaggtaaaat 20008031  T
Q  100 tgggaaaataagggttaatgatgattttgnnnnnnnnngggtataagaatcaggttt-taatgtcgtactttgatgattagtatgatttcttaatccatg 198  Q
    ||||||| | |||||||| ||||||||||          |||||||| ||||||||| || ||| ||||||||||| |||||||| |||||||||| ||     
T  20008032 tgggaaatttagggttaaggatgattttgaaagaaaa--ggtataaggatcaggtttatattgttgtactttgatgtttagtatgttttcttaatctata 20008129  T
Q  199 ttgttgatgttgatcgtaattggaatgaaaatagaatatgatggatgaattttggaagttttgtatgaatgcttgaatgagctgaattgttgttgttgat 298  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||  ||| ||||||||||||||||   |||||| ||||||||||    
T  20008130 ttgttgatgctgatcgtaattggaatgaaaatagaatatgatgaatgaattttagaagccttgcatgaatgcttgaatgaatagaattgatgttgttgat 20008229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 4 - 299
Target Start/End: Original strand, 9099060 - 9099354
Alignment:
Q  4 tctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg-aaaattaatcaattgaactgttcttaaggtaaaattgg 102  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||    
T  9099060 tctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttctgaaaaattaatcaatttaactgttcttaaggtaaaattgg 9099159  T
Q  103 gaaaataagggttaatgatgattttgnnnnnnnnngggtataagaatcaggttt-taatgtcgtactttgatgattagtatgatttcttaatccatgttg 201  Q
    |||| | |||||||||||||||| ||           || |||||||||||||| |||||| ||| ||||||||||||||||||||| ||||| || |||    
T  9099160 gaaatttagggttaatgatgattctgaagaaaat---gtgtaagaatcaggtttataatgttgta-tttgatgattagtatgatttcctaatctatattg 9099255  T
Q  202 ttgatgttgatcgtaa-ttggaatgaaaatagaatatgatggatgaattttggaagttttgtatgaatgcttgaatgagctgaattgttgttgttgatg 299  Q
    ||||| |||||| ||| ||||| ||||||||||||||||| ||||||||||||||||| || ||||||| |||| ||   | |||||||||||||||||    
T  9099256 ttgatattgatcataatttggagtgaaaatagaatatgatagatgaattttggaagttctgaatgaatgtttgattggagttaattgttgttgttgatg 9099354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 21364468 - 21364762
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaatt 100  Q
    ||||||||||||||| |||||||||||||||||||| |||| || | ||||||||| ||||||||||||||| ||||| ||||||| ||| |||||||||    
T  21364468 ttgtctttgcaattcaaaggtaagggtgggattatccttcagtaatgataatatatgatttctgaaaattaagcaatttaactgtt-ttatggtaaaatt 21364566  T
Q  101 gggaaaataagggttaatgatgattttgnnnnnnnnngggtataagaatcaggttt-taatgtcgtactttgatgattagtatgatttcttaatccatgt 199  Q
    ||| |||| ||||||||||    |||||            | ||||| | |||||| |||||| ||| ||||||||||| ||||||||| || ||  | |    
T  21364567 ggg-aaattagggttaatggcatttttgaagaaaata---tgtaagacttaggtttataatgttgta-tttgatgattaatatgatttcctactctgtat 21364661  T
Q  200 tgttgatgttgatcgtaattggaatgaaaatagaatatgatggatgaa-ttttggaagttttgtatgaatgcttgaatgagctgaattgttgttgttgat 298  Q
    |||||||||||||| ||||||| |||||  |||||||| ||||||||| ||||| ||||| || ||||||| |||| |    ||||||||||||||||||    
T  21364662 tgttgatgttgatcataattgg-atgaaggtagaatataatggatgaagttttgaaagttctgaatgaatgtttgatttgaatgaattgttgttgttgat 21364760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 23968450 - 23968744
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaatt 100  Q
    ||||||||||||||| |||||||||||||||||||| |||| || | ||||||||| ||||||||||||||| ||||| ||||||| ||| |||||||||    
T  23968450 ttgtctttgcaattcaaaggtaagggtgggattatccttcagtaatgataatatatgatttctgaaaattaagcaatttaactgtt-ttatggtaaaatt 23968548  T
Q  101 gggaaaataagggttaatgatgattttgnnnnnnnnngggtataagaatcaggttt-taatgtcgtactttgatgattagtatgatttcttaatccatgt 199  Q
    ||| |||| ||||||||||    |||||            | ||||| | |||||| |||||| ||| ||||||||||| ||||||||| || ||  | |    
T  23968549 ggg-aaattagggttaatggcatttttgaagaaaata---tgtaagacttaggtttataatgttgta-tttgatgattaatatgatttcctactctgtat 23968643  T
Q  200 tgttgatgttgatcgtaattggaatgaaaatagaatatgatggatgaa-ttttggaagttttgtatgaatgcttgaatgagctgaattgttgttgttgat 298  Q
    |||||||||||||| ||||||| |||||  |||||||| ||||||||| ||||| ||||| || ||||||| |||| |    ||||||||||||||||||    
T  23968644 tgttgatgttgatcataattgg-atgaaggtagaatataatggatgaagttttgaaagttctgaatgaatgtttgatttgaatgaattgttgttgttgat 23968742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 15458559 - 15458492
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 68  Q
    |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||    
T  15458559 ttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaa 15458492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 15465154 - 15465087
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 68  Q
    |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||    
T  15465154 ttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaa 15465087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 31252492 - 31252390
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt-aaggtaaaa 98  Q
    |||||||||||||||||||||||||||| |||||||||| |||  | ||||||||||||||||||||||||||| |||||||  |||||| ||| |||||    
T  31252492 ttgtctttgcaattctaaggtaagggtgagattatcttttaatgattataatatataatttctgaaaattaatctaattgaatagttcttgaagataaaa 31252393  T
Q  99 ttg 101  Q
    |||    
T  31252392 ttg 31252390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 11288654 - 11288721
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 68  Q
    ||||||| |||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||    
T  11288654 ttgtcttggcaattctaaggtaagggtgggattatctttcaatgatcttaatatataatttctgaaaa 11288721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 299
Target Start/End: Complemental strand, 29097770 - 29097637
Alignment:
Q  168 tttgatgattagtatgatttcttaatccatgttgttgatgttgatcgtaattggaa-tgaaaatagaatatgatggatgaa-ttttggaagttttgtatg 265  Q
    ||||||||||||||||||||| ||||| ||  ||||||| |||||| ||||| ||| |||||||||||||| || |||||| ||||||||||| || |||    
T  29097770 tttgatgattagtatgatttcctaatctataatgttgatattgatcataatttgaagtgaaaatagaatataatagatgaatttttggaagttctgaatg 29097671  T
Q  266 aatgcttgaatgagctgaattgttgttgttgatg 299  Q
    |||| |||| ||   | |||||||||||||||||    
T  29097670 aatgtttgattggagttaattgttgttgttgatg 29097637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 10986173 - 10986235
Alignment:
Q  8 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    ||||||||||||||||||||| || |||||||||||| ||||||| |||||||||| ||||||    
T  10986173 tgcaattctaaggtaagggtgagactatctttcaataatcataatctataatttctaaaaatt 10986235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 34639972 - 34640041
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    ||||||| |||||||||||||||||||| || ||||| |||||| || |||| |||||||||||||||||    
T  34639972 ttgtcttcgcaattctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaatt 34640041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 34646646 - 34646715
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    ||||||| |||||||||||||||||||| || ||||| |||||| || |||| |||||||||||||||||    
T  34646646 ttgtcttcgcaattctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaatt 34646715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 9187384 - 9187268
Alignment:
Q  181 atgatttcttaatccatgttgttgatgttgatcgtaattggaatgaaaatagaatatgatggatgaattttggaagttttgtatgaatgcttgaatgagc 280  Q
    |||||||||||||| ||  ||||| ||| ||||  |||| |||||||| |||||| || ||||| ||||   |||||||||||||| |||| |||||| |    
T  9187384 atgatttcttaatctataatgttgttgt-gatcagaatttgaatgaaattagaat-tgttggataaattggagaagttttgtatgattgctagaatgatc 9187287  T
Q  281 tgaattgttgttgttgatg 299  Q
    |||||||||||||||||||    
T  9187286 tgaattgttgttgttgatg 9187268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 299
Target Start/End: Original strand, 24513048 - 24513126
Alignment:
Q  221 gaatgaaaatagaatatgatggatgaattttggaagttttgtatgaatgcttgaatgagctgaattgttgttgttgatg 299  Q
    |||||||| |||||| || ||||| ||||   |||||||||||||| |||| |||||| ||||||||||||||||||||    
T  24513048 gaatgaaattagaatttgttggataaattggagaagttttgtatgattgctagaatgatctgaattgttgttgttgatg 24513126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 29614146 - 29614201
Alignment:
Q  15 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  29614146 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 29614201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 4477912 - 4477858
Alignment:
Q  16 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  4477912 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 4477858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 23839253 - 23839199
Alignment:
Q  16 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  23839253 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 23839199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 24512836 - 24512898
Alignment:
Q  8 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    ||||| |||||||| |||||| || ||||| |||||| ||||| |||||||||||||||||||    
T  24512836 tgcaaatctaaggtgagggtgagactatctctcaataatcatagtatataatttctgaaaatt 24512898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 12168418 - 12168366
Alignment:
Q  15 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 67  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  12168418 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 12168366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 19287327 - 19287275
Alignment:
Q  15 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 67  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  19287327 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 19287275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 19785869 - 19785921
Alignment:
Q  15 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 67  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  19785869 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 19785921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 19878511 - 19878459
Alignment:
Q  15 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 67  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  19878511 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 19878459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 930095 - 930150
Alignment:
Q  15 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    |||||||||||||| || ||||| |||||| ||||||| |||| ||||||||||||    
T  930095 ctaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaatt 930150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 18800493 - 18800438
Alignment:
Q  15 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    |||| ||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  18800493 ctaatgtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 18800438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 28288495 - 28288537
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaat 43  Q
    |||||||||||||||||||||||||||| || ||||| |||||    
T  28288495 ttgtctttgcaattctaaggtaagggtgagactatctctcaat 28288537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 9187550 - 9187498
Alignment:
Q  16 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 68  Q
    ||||||||||||| || ||||| |||||| || ||||| ||||||||||||||    
T  9187550 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaa 9187498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 19884287 - 19884235
Alignment:
Q  15 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 67  Q
    ||||||| |||||| || ||||| |||||| ||||||| ||||||||||||||    
T  19884287 ctaaggttagggtgagactatctctcaataatcataatctataatttctgaaa 19884235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 24563507 - 24563475
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggatt 33  Q
    |||||||||||||||||||||||||||| ||||    
T  24563507 ttgtctttgcaattctaaggtaagggtgagatt 24563475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 151; Significance: 6e-80; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 10 - 301
Target Start/End: Complemental strand, 9396 - 9107
Alignment:
Q  10 caattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttctt-aaggtaaaattgggaaaat 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| || |    
T  9396 caattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaaagtaaaattggg-aatt 9298  T
Q  109 aagggttaatgatgattttgnnnnnnnnngggtataagaatcaggttt-taatgtcgtactttgatgattagtatgatttcttaatccatgttgttgatg 207  Q
    ||||||||||||||||||||          ||| ||||||| |||||| |  ||| ||| ||||||| |||||||||||||| |||| |||||||||||     
T  9297 aagggttaatgatgattttgaaagaaaa--ggtgtaagaattaggtttattgtgttgtaatttgatgtttagtatgatttctcaatctatgttgttgatt 9200  T
Q  208 ttgatcgtaattggaatgaaaatagaatatgatggatgaattttggaagttttgtatgaatgcttgaatgagctgaattgttgttgttgatgtc 301  Q
     |||||  |||||||| ||||||||||||||||||||||| || ||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  9199 gtgatcagaattggaacgaaaatagaatatgatggatgaa-ttgggaagttttgtatgattgcttgaatgggctgaattgttgttgttgatgtc 9107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1469 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold1469
Description:

Target: scaffold1469; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 301
Target Start/End: Complemental strand, 1424 - 1128
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaatt 100  Q
    |||||||||||||||||||||||||||||||||  |||||||||||  ||||||||  |||||||||||||| ||||| |||||||||||||||||||||    
T  1424 ttgtctttgcaattctaaggtaagggtgggatttcctttcaatagtgttaatatatgctttctgaaaattaaacaatttaactgttcttaaggtaaaatt 1325  T
Q  101 gggaaaataagggttaatgatgattttgnnnnnnnnngggtataagaatcaggttt-taatgtcgtactttgatgattagtatgatttcttaatccatgt 199  Q
    |||||||| |||  ||||||||||||||          |   ||||| ||||||||  |||||  ||  |||||||||||||||||||| |||||  | |    
T  1324 gggaaaattaggtctaatgatgattttgaagaaaatgcg---taagattcaggtttacaatgttata-attgatgattagtatgatttcctaatctgtat 1229  T
Q  200 tgttgatgttgatcgtaattggaatgaaaatagaatatgatggatgaattttggaagttt-tgtatgaatgcttgaatgagctgaattgttgttgttgat 298  Q
    ||||| |||||||| ||||||| |||||||||| || | |||  |||| ||||||||||| ||||||||||||||| || ||||||||||||||||||||    
T  1228 tgttgttgttgatcataattgg-atgaaaatagcatgttatgtgtgaa-tttggaagtttctgtatgaatgcttgattgggctgaattgttgttgttgat 1131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 1898 - 2025
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttctt-aaggtaaaat 99  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  1898 ttgtctttgcaattgtaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttgaaagtaaaat 1997  T
Q  100 tgggaaaataagggttaatgatgattttg 128  Q
    |||| || |||||||||||||||||||||    
T  1998 tggg-aattaagggttaatgatgattttg 2025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 88; Significance: 3e-42; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 1066 - 939
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaatt 100  Q
    |||||||||||||||||||||||||||||||| |||| |||||||| ||||||||| ||||||||||||||| ||||| ||||||||||| |||||||||    
T  1066 ttgtctttgcaattctaaggtaagggtgggatcatctctcaatagtgataatatatgatttctgaaaattaagcaatttaactgttcttatggtaaaatt 967  T
Q  101 gggaaaataagggttaatgatgattttg 128  Q
    |||||||| ||||||||||  |||||||    
T  966 gggaaaattagggttaatggcgattttg 939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 300
Target Start/End: Complemental strand, 870 - 771
Alignment:
Q  200 tgttgatgttgatcgtaattggaatgaaaatagaatatgatggatgaattttggaagttttgtatgaatgcttgaatgagctgaattgttgttgttgatg 299  Q
    ||||| |||||||| |||||||| ||||||||| || | ||| |||||||| |||  || ||||| ||||||||| || |||| |||||||||||| |||    
T  870 tgttgttgttgatcataattgga-tgaaaatagcatgttatgtatgaatttgggattttctgtattaatgcttgattgggctggattgttgttgtttatg 772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 10 - 300
Target Start/End: Original strand, 16059 - 16346
Alignment:
Q  10 caattctaaggtaagggtgggattatctttcaatagtcataatatataatttctg-aaaattaatcaattgaactgttcttaaggtaaaattgggaaaat 108  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||| ||||||| ||||| ||||| | || || |    
T  16059 caattctaaggtaagggtgggattatctttcaatagttataatatatgatttctgaaaaattaatcaatttaactgtttttaagataaaaattgg-aatt 16157  T
Q  109 aagggttaatgatgattttgnnnnnnnnngggtataagaatcaggtt-ttaatgtcgtactttgatgattagtatgatttcttaatccatgttgttgatg 207  Q
     |||||||||||||||||||           ||  ||||||||||||  | |||| ||| ||||||||||||||||||||  ||||| || ||||| ||     
T  16158 tagggttaatgatgattttgaagaaaat---gtgcaagaatcaggttcatgatgttgta-tttgatgattagtatgattttctaatctatattgttcata 16253  T
Q  208 ttgatcgtaattggaatg-aaaatagaatatgatggatgaattttggaagttttgtatgaatgcttgaatgagctgaattgttgttgttgatgt 300  Q
    |||||| |||||| | || ||||||||||||||| || || ||||||||||| || ||||||| |||| ||   ||||||||||||||| ||||    
T  16254 ttgatcataattgaagtgaaaaatagaatatgatagaagagttttggaagttctgaatgaatg-ttgattgtaatgaattgttgttgtttatgt 16346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 66; Significance: 3e-29; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 300
Target Start/End: Original strand, 91191 - 91486
Alignment:
Q  4 tctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggt---aaaatt 100  Q
    ||||||||||||||||||||||||||||| ||||||||||| | ||||||||| ||||||||||||||| ||||| ||||||| ||| |||   ||||||    
T  91191 tctttgcaattctaaggtaagggtgggatcatctttcaataatgataatatatgatttctgaaaattaagcaatttaactgtttttatggtaaaaaaatt 91290  T
Q  101 gggaaaataagggttaatgatgattttgnnnnnnnnngggtataagaatcaggttt-taatgtcgtactttgatgattagtatgatttcttaatccatgt 199  Q
    ||| |||| ||||||||||   ||||||           || ||||| | |||||| |||||| ||| ||||||||||| ||||||||| || ||  | |    
T  91291 ggg-aaattagggttaatggcaattttgaagaaaat---gtgtaagatttaggtttataatgttgta-tttgatgattaatatgatttcctactctgtat 91385  T
Q  200 tgttgatgttgatcgtaattggaatgaaaatagaatatgatggatgaa-ttttggaagttttgtatgaatgcttgaatgagctgaattgttgttgttgat 298  Q
    || ||||||||||| ||||||| |||||  |||||||| ||||||||| ||||| ||||| || ||||||| |||| |    ||||||||||||||||||    
T  91386 tggtgatgttgatcataattgg-atgaaggtagaatataatggatgaagttttgaaagttctgaatgaatgtttgatttgaatgaattgttgttgttgat 91484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 300
Target Start/End: Original strand, 96917 - 97212
Alignment:
Q  4 tctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggt---aaaatt 100  Q
    ||||||||||||||||||||||||||||| ||||||||||| | ||||||||| ||||||||||||||| ||||| ||||||| ||| |||   ||||||    
T  96917 tctttgcaattctaaggtaagggtgggatcatctttcaataatgataatatatgatttctgaaaattaagcaatttaactgtttttatggtaaaaaaatt 97016  T
Q  101 gggaaaataagggttaatgatgattttgnnnnnnnnngggtataagaatcaggttt-taatgtcgtactttgatgattagtatgatttcttaatccatgt 199  Q
    ||| |||| ||||||||||   ||||||           || ||||| | |||||| |||||| ||| ||||||||||| ||||||||| || ||  | |    
T  97017 ggg-aaattagggttaatggcaattttgaagaaaat---gtgtaagatttaggtttataatgttgta-tttgatgattaatatgatttcctactctgtat 97111  T
Q  200 tgttgatgttgatcgtaattggaatgaaaatagaatatgatggatgaa-ttttggaagttttgtatgaatgcttgaatgagctgaattgttgttgttgat 298  Q
    || ||||||||||| ||||||| |||||  |||||||| ||||||||| ||||| ||||| || ||||||| |||| |    ||||||||||||||||||    
T  97112 tggtgatgttgatcataattgg-atgaaggtagaatataatggatgaagttttgaaagttctgaatgaatgtttgatttgaatgaattgttgttgttgat 97210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 111938 - 111885
Alignment:
Q  15 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 68  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||||||||||    
T  111938 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 111885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 5843 - 5945
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt-aaggtaaaa 98  Q
    |||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||| |||||||  |||||| ||| |||||    
T  5843 ttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaattaatctaattgaatagttcttgaagataaaa 5942  T
Q  99 ttg 101  Q
    |||    
T  5943 ttg 5945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 59; Significance: 5e-25; HSPs: 2)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 10308 - 10222
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttc 87  Q
    |||||| | ||||||||||||||||||| ||||||||| ||||| ||||||||| |||||||||||||||||||||||||| |||||    
T  10308 ttgtctctacaattctaaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaattaatcaattgaattgttc 10222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 297
Target Start/End: Complemental strand, 10060 - 10016
Alignment:
Q  253 gaagttttgtatgaatgcttgaatgagctgaattgttgttgttga 297  Q
    |||||||||||||| |||| |||||  ||||||||||||||||||    
T  10060 gaagttttgtatgattgctagaatggtctgaattgttgttgttga 10016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 13880 - 13947
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 68  Q
    |||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||    
T  13880 ttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaa 13947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 70 - 6
Alignment:
Q  4 tctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 68  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||    
T  70 tctttgcaattctaaggtaagggtgggattatctttcaatagttctaatatatgatttctgaaaa 6  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 23562 - 23628
Alignment:
Q  8 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc 74  Q
    |||||||||||||||||||||||||||||||| |||  ||||||| |||||||||||||||||||||    
T  23562 tgcaattctaaggtaagggtgggattatctttgaatgatcataatgtataatttctgaaaattaatc 23628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 493014 - 493086
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc 74  Q
    |||||| ||||||||||||||||||||| ||||||||||||||| || |||| |||||||||||||||||||||    
T  493014 ttgtctctgcaattctaaggtaagggtgagattatctttcaataatc-taatgtataatttctgaaaattaatc 493086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 3388 - 3461
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc 74  Q
    ||||||||||||||||||||||||||||  |||||||||||||     ||||||||||||||||||||||||||    
T  3388 ttgtctttgcaattctaaggtaagggtgatattatctttcaatgaatttaatatataatttctgaaaattaatc 3461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 10181 - 10250
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    |||||| | |||||||||||||||||||||| ||||| |||||| ||||||| |||||||||||||||||    
T  10181 ttgtctatacaattctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaatt 10250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 43
Target Start/End: Original strand, 11079 - 11111
Alignment:
Q  11 aattctaaggtaagggtgggattatctttcaat 43  Q
    |||||||||||||||||||||||||| ||||||    
T  11079 aattctaaggtaagggtgggattatccttcaat 11111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 1511 - 1580
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    |||||| | |||||||||||||||||||||| ||||| |||||| ||||||| |||||||||||||||||    
T  1511 ttgtctatacaattctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaatt 1580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 111755 - 111686
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    ||||||| |||||||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  111755 ttgtcttcgcaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 111686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 11850 - 11905
Alignment:
Q  15 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  11850 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 11905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 10546 - 10609
Alignment:
Q  11 aattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc 74  Q
    |||||||||||||| ||||||||||||||||||  || |||| |||||||||||||||||||||    
T  10546 aattctaaggtaagtgtgggattatctttcaatgatcttaatgtataatttctgaaaattaatc 10609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 73347 - 73281
Alignment:
Q  8 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc 74  Q
    ||||||| | ||||||||||||||||||||||||||  ||||||| |||||||| ||||||||||||    
T  73347 tgcaattatgaggtaagggtgggattatctttcaatgatcataatgtataatttatgaaaattaatc 73281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2054 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 770 - 717
Alignment:
Q  15 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 68  Q
    |||||||||||||||||||||||||||||  || ||||||||||||||||||||    
T  770 ctaaggtaagggtgggattatctttcaatgatcttaatatataatttctgaaaa 717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 16875 - 16801
Alignment:
Q  16 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt 89  Q
    ||||||||||||| || ||||| |||||| ||||| ||||||||||||||||||| ||| ||||||| |||||||    
T  16875 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttctt 16801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 299
Target Start/End: Complemental strand, 16636 - 16593
Alignment:
Q  256 gttttgtatgaatgcttgaatgagctgaattgttgttgttgatg 299  Q
    ||||||||||| |||| |||||| ||||||||||||||||||||    
T  16636 gttttgtatgattgctagaatgatctgaattgttgttgttgatg 16593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 40524 - 40586
Alignment:
Q  8 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    ||||| ||||||||||||||| || ||||| |||||| ||||| |||||||||||||||||||    
T  40524 tgcaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaatt 40586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 284
Target Start/End: Original strand, 40677 - 40800
Alignment:
Q  160 tgtcgtactttgatgattagtatgatttcttaatccatgttgttgatgttgatcgtaattggaatgaaaatagaatatgatggatgaattttggaagttt 259  Q
    ||| ||| ||||||| | || |||||||||||||| ||  ||||||||| ||||  |||| |||||||| ||||||  | ||||| ||||   |||||||    
T  40677 tgttgtaatttgatgttcagaatgatttcttaatctataatgttgatgt-gatcagaatttgaatgaaattagaatcggttggataaattggagaagttt 40775  T
Q  260 tgtatgaatgcttgaatgagctgaa 284  Q
    ||||||| |||| |||||| |||||    
T  40776 tgtatgattgctagaatgatctgaa 40800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 116951 - 116877
Alignment:
Q  16 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt 89  Q
    ||||||||||||| || ||||| |||||| ||||| ||||||||||||||||||| ||| ||||||| |||||||    
T  116951 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttctt 116877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 135530 - 135474
Alignment:
Q  14 tctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    ||||||||||||||| || ||||| |||||| ||||| |||||||||||||||||||    
T  135530 tctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaatt 135474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 299
Target Start/End: Complemental strand, 135375 - 135245
Alignment:
Q  168 tttgatgattagtatgatttcttaatccatgttgttgatgttgatcgtaattggaatgaaaatagaatatgatggatgaattttggaagttttgtatgaa 267  Q
    ||||||| | || |||||||||||||| ||  ||||| ||| ||||  |||| |||||||| ||||||  | ||||  ||||   ||||||||||||||     
T  135375 tttgatgttcagaatgatttcttaatctataatgttgttgt-gatcagaatttgaatgaaattagaatcggttggaaaaattggagaagttttgtatgat 135277  T
Q  268 tgcttgaatgagctgaattgttgttgttgatg 299  Q
    |||| |||||| ||||||||||||||||||||    
T  135276 tgctggaatgatctgaattgttgttgttgatg 135245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 750 - 805
Alignment:
Q  15 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  750 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 11397 - 11342
Alignment:
Q  15 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  11397 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 11342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 216 - 299
Target Start/End: Original strand, 22792 - 22875
Alignment:
Q  216 aattggaatgaaaatagaatatgatggatgaattttggaagttttgtatgaatgcttgaatgagctgaattgttgttgttgatg 299  Q
    |||| |||||||| |||||| || | ||| ||||   |||||||||||||| |||| |||||| ||||||||||||||||||||    
T  22792 aatttgaatgaaattagaatctgtttgataaattggagaagttttgtatgattgctagaatgacctgaattgttgttgttgatg 22875  T

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Target: scaffold0235; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 22585 - 22646
Alignment:
Q  8 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaat 69  Q
    ||||| || |||||||||||| || ||||| |||||| ||||| ||||||||||||||||||    
T  22585 tgcaaatccaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaat 22646  T

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Target: scaffold0154 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 30913 - 30858
Alignment:
Q  15 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  30913 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 30858  T

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Target: scaffold0124 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 295
Target Start/End: Original strand, 34429 - 34555
Alignment:
Q  168 tttgatgattagtatgatttcttaatccatgttgttgatgttgatcgtaattggaatgaaaatagaatatgatggatgaattttggaagttttgtatgaa 267  Q
    ||||||| | || |||||||||||||| ||  ||||| ||| ||||  ||||||||||||| |||||| || ||||| ||||   |||||||||| |||     
T  34429 tttgatgttcagaatgatttcttaatctataatgttgctgt-gatcagaattggaatgaaattagaatctgttggataaattggagaagttttgtgtgat 34527  T
Q  268 tgcttgaatgagctgaattgttgttgtt 295  Q
    || | |||||| ||||||||||||||||    
T  34528 tgttagaatgatctgaattgttgttgtt 34555  T

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Target: scaffold0124; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 34276 - 34330
Alignment:
Q  16 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    ||||||||||||| || ||||| || ||| ||||| |||||||||||||||||||    
T  34276 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaatt 34330  T

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Target: scaffold0461 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 8 - 82
Alignment:
Q  16 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt 89  Q
    ||||||||||||| || ||||| |||||| || ||||| |||||||||||||||| ||| ||||||| |||||||    
T  8 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattgaattgttctt 82  T

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Target: scaffold0461; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 216 - 295
Target Start/End: Original strand, 207 - 286
Alignment:
Q  216 aattggaatgaaaatagaatatgatggatgaattttggaagttttgtatgaatgcttgaatgagctgaattgttgttgtt 295  Q
    |||| ||| |||| |||||| || ||||| ||||   |||||||||||||| |||| |||||| ||||||||||||||||    
T  207 aatttgaaggaaattagaatttgttggataaattggagaagttttgtatgattgctagaatgatctgaattgttgttgtt 286  T

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Target: scaffold0146 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 13687 - 13613
Alignment:
Q  16 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt 89  Q
    ||||||||||||| || ||||| |||||| || ||||| |||||||||||||||| ||| ||||||| |||||||    
T  13687 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattgaattgttctt 13613  T

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Target: scaffold0129 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 45260 - 45326
Alignment:
Q  1 ttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 67  Q
    ||||||| |||| ||||||||||||||| || ||||| |||||| ||||||| ||||||| ||||||    
T  45260 ttgtcttcgcaaatctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa 45326  T

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Target: scaffold0020 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 101928 - 102002
Alignment:
Q  16 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc-aattgaactgttctt 89  Q
    ||||||||||||| || ||||| |||||| ||||| ||||||||| ||||||||| ||| ||||||| |||||||    
T  101928 taaggtaagggtgagactatctctcaataatcatagtatataattcctgaaaattgatctaattgaattgttctt 102002  T

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Target: scaffold0310 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 17700 - 17644
Alignment:
Q  14 tctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    ||||||||||||||| || ||||| ||||||  |||||| |||||||||||||||||    
T  17700 tctaaggtaagggtgagactatctctcaataaccataatgtataatttctgaaaatt 17644  T

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Target: scaffold0025 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 14398 - 14450
Alignment:
Q  18 aggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    ||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  14398 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 14450  T

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Target: scaffold0456 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 987 - 932
Alignment:
Q  15 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    |||||||||||||| || ||||| |||||| ||||||| |||| ||||||||||||    
T  987 ctaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaatt 932  T

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Target: scaffold0456; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 8132 - 8077
Alignment:
Q  15 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    |||||||||||||| || ||||| |||||| ||||||| |||| ||||||||||||    
T  8132 ctaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaatt 8077  T

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Target: scaffold0090 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 18225 - 18170
Alignment:
Q  15 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||| ||||||||    
T  18225 ctaaggtaagggtgagactatctctcaataatcataatctataatttttgaaaatt 18170  T

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Target: scaffold0085 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 300
Target Start/End: Original strand, 3921 - 3956
Alignment:
Q  265 gaatgcttgaatgagctgaattgttgttgttgatgt 300  Q
    ||||||||||||| ||||||||||||||||||||||    
T  3921 gaatgcttgaatgggctgaattgttgttgttgatgt 3956  T

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Target: scaffold1461 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1461
Description:

Target: scaffold1461; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 1485 - 1543
Alignment:
Q  16 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatc 74  Q
    ||||||||||||| ||||||||| ||||  || ||||||  ||||||||||||||||||    
T  1485 taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatc 1543  T

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Target: scaffold0317 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 1441 - 1387
Alignment:
Q  16 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 70  Q
    ||||||||||||| || |||||||||||  |||| ||||||||||| ||||||||    
T  1441 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaatt 1387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 1242 - 1181
Alignment:
Q  6 tttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 67  Q
    |||||||  |||||||||||||| || ||||| |||||| ||||||| ||||||| ||||||    
T  1242 tttgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa 1181  T

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Target: scaffold0117 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 1897 - 1950
Alignment:
Q  15 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 68  Q
    |||||||||||||| || ||| | |||||| ||||||| |||||||||||||||    
T  1897 ctaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaa 1950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 8574 - 8627
Alignment:
Q  15 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 68  Q
    |||||||||||||| || ||| | |||||| ||||||| |||||||||||||||    
T  8574 ctaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaa 8627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 1732 - 1784
Alignment:
Q  15 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 67  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| ||||||    
T  1732 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa 1784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 5755 - 5807
Alignment:
Q  15 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 67  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| ||||||    
T  5755 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa 5807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 13019 - 12967
Alignment:
Q  17 aaggtaagggtgggattatcttt-caatagtcataatatataatttctgaaaa 68  Q
    ||||||||||||||||||||||| |||||||  |||||||| |||||| ||||    
T  13019 aaggtaagggtgggattatctttacaatagttctaatatatgatttctaaaaa 12967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 346 - 294
Alignment:
Q  15 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 67  Q
    |||||||||||||| || ||||| ||||||  |||||| ||||||||||||||    
T  346 ctaaggtaagggtgagactatctctcaataaccataatctataatttctgaaa 294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 50234 - 50182
Alignment:
Q  15 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 67  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| ||||||    
T  50234 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa 50182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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