View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8130_low_19 (Length: 246)

Name: NF8130_low_19
Description: NF8130
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8130_low_19
NF8130_low_19
[»] chr2 (47 HSPs)
chr2 (26-246)||(20648902-20649122)
chr2 (1-246)||(25268003-25268248)
chr2 (26-246)||(22860794-22861014)
chr2 (1-242)||(8889103-8889344)
chr2 (114-239)||(23291838-23291963)
chr2 (103-239)||(23333467-23333603)
chr2 (26-246)||(25106598-25106819)
chr2 (113-246)||(19036394-19036528)
chr2 (108-239)||(24659680-24659812)
chr2 (76-239)||(23753664-23753827)
chr2 (1-239)||(24653116-24653355)
chr2 (127-244)||(19648688-19648805)
chr2 (2-246)||(25174670-25174904)
chr2 (1-118)||(23671978-23672095)
chr2 (1-95)||(4078185-4078279)
chr2 (173-246)||(22012271-22012344)
chr2 (173-246)||(35243694-35243767)
chr2 (135-239)||(22812917-22813021)
chr2 (1-95)||(44090363-44090457)
chr2 (186-246)||(20913463-20913523)
chr2 (156-239)||(28970416-28970500)
chr2 (173-240)||(15642437-15642504)
chr2 (1-239)||(19702630-19702858)
chr2 (173-239)||(34978-35044)
chr2 (173-239)||(4078347-4078413)
chr2 (2-48)||(11359564-11359610)
chr2 (121-239)||(24944251-24944368)
chr2 (178-239)||(27366549-27366611)
chr2 (1-95)||(27730252-27730346)
chr2 (173-246)||(44090222-44090295)
chr2 (1-48)||(19648874-19648921)
chr2 (28-95)||(20724840-20724907)
chr2 (173-244)||(32910624-32910695)
chr2 (173-244)||(45029330-45029401)
chr2 (2-48)||(1062467-1062513)
chr2 (2-48)||(1067861-1067907)
chr2 (177-239)||(2385063-2385125)
chr2 (2-48)||(2385244-2385290)
chr2 (2-48)||(4070861-4070907)
chr2 (177-239)||(11466951-11467013)
chr2 (177-239)||(14564760-14564822)
chr2 (2-48)||(21605511-21605557)
chr2 (177-239)||(24425982-24426044)
chr2 (177-246)||(17582618-17582687)
chr2 (122-239)||(27038118-27038235)
chr2 (4-48)||(2106376-2106420)
chr2 (158-242)||(2106520-2106604)
[»] chr7 (98 HSPs)
chr7 (1-246)||(15097093-15097339)
chr7 (1-246)||(15103469-15103715)
chr7 (1-238)||(46681329-46681567)
chr7 (26-246)||(37380714-37380934)
chr7 (26-246)||(15436701-15436921)
chr7 (26-246)||(45186262-45186482)
chr7 (76-246)||(14168681-14168851)
chr7 (76-246)||(14172928-14173098)
chr7 (26-246)||(17467383-17467601)
chr7 (26-246)||(17585613-17585831)
chr7 (76-246)||(81226-81398)
chr7 (26-246)||(13318511-13318725)
chr7 (26-246)||(12555265-12555475)
chr7 (26-246)||(14580688-14580908)
chr7 (1-95)||(30271099-30271193)
chr7 (1-246)||(10520584-10520820)
chr7 (143-244)||(32772357-32772457)
chr7 (26-93)||(15839393-15839460)
chr7 (1-244)||(3328594-3328828)
chr7 (186-246)||(11854551-11854611)
chr7 (121-239)||(12429733-12429849)
chr7 (156-246)||(15085102-15085192)
chr7 (136-246)||(16475265-16475374)
chr7 (1-95)||(11879830-11879924)
chr7 (164-246)||(15143165-15143246)
chr7 (155-244)||(16951369-16951458)
chr7 (135-244)||(18956015-18956123)
chr7 (178-246)||(4281111-4281180)
chr7 (135-239)||(6412754-6412858)
chr7 (173-246)||(30602034-30602107)
chr7 (177-242)||(42059483-42059548)
chr7 (173-240)||(13452979-13453046)
chr7 (173-240)||(21758219-21758286)
chr7 (173-239)||(13020632-13020698)
chr7 (173-239)||(13026839-13026905)
chr7 (121-242)||(16184597-16184718)
chr7 (173-246)||(11298871-11298944)
chr7 (173-246)||(11307235-11307308)
chr7 (173-246)||(11340666-11340739)
chr7 (177-246)||(49159693-49159762)
chr7 (3-95)||(37243578-37243670)
chr7 (1-48)||(750607-750654)
chr7 (173-240)||(12454986-12455053)
chr7 (1-48)||(26089311-26089358)
chr7 (1-48)||(26119733-26119780)
chr7 (1-48)||(40684122-40684169)
chr7 (1-48)||(48987281-48987328)
chr7 (1-48)||(49159527-49159574)
chr7 (125-242)||(2309-2425)
chr7 (173-239)||(2439809-2439875)
chr7 (26-100)||(11219403-11219477)
chr7 (173-239)||(11879992-11880058)
chr7 (177-239)||(12399020-12399082)
chr7 (173-239)||(13963183-13963249)
chr7 (1-95)||(13963317-13963411)
chr7 (177-239)||(16843050-16843112)
chr7 (177-239)||(26288917-26288978)
chr7 (125-239)||(46347899-46348012)
chr7 (173-239)||(46650629-46650695)
chr7 (2-95)||(11340505-11340598)
chr7 (186-239)||(14945109-14945162)
chr7 (186-239)||(15372702-15372755)
chr7 (173-246)||(18436364-18436437)
chr7 (173-238)||(23521906-23521971)
chr7 (173-246)||(26089124-26089197)
chr7 (173-246)||(26112929-26113002)
chr7 (173-246)||(26119546-26119619)
chr7 (206-246)||(16069629-16069669)
chr7 (173-240)||(12462442-12462509)
chr7 (1-48)||(14280982-14281029)
chr7 (1-48)||(15632124-15632171)
chr7 (1-48)||(15722539-15722586)
chr7 (6-93)||(16951508-16951595)
chr7 (1-48)||(17182039-17182086)
chr7 (1-48)||(20019034-20019081)
chr7 (1-48)||(21758057-21758104)
chr7 (1-48)||(26113116-26113163)
chr7 (177-240)||(30270964-30271027)
chr7 (1-48)||(37288231-37288278)
chr7 (2-48)||(643313-643359)
chr7 (2-48)||(1318531-1318577)
chr7 (2-48)||(2439648-2439694)
chr7 (173-239)||(15632285-15632351)
chr7 (1-95)||(18436504-18436597)
chr7 (177-239)||(20018853-20018915)
chr7 (2-48)||(30602222-30602268)
chr7 (177-239)||(46175250-46175312)
chr7 (6-56)||(49151356-49151406)
chr7 (6-56)||(49158046-49158096)
chr7 (177-246)||(643479-643548)
chr7 (3-48)||(12399200-12399245)
chr7 (26-95)||(15143026-15143095)
chr7 (173-242)||(33405577-33405646)
chr7 (206-246)||(5186416-5186456)
chr7 (1-53)||(15085284-15085336)
chr7 (155-239)||(15839511-15839594)
chr7 (155-238)||(37243446-37243529)
chr7 (4-48)||(42059320-42059364)
[»] chr1 (69 HSPs)
chr1 (26-246)||(20849851-20850071)
chr1 (26-246)||(21409808-21410028)
chr1 (26-246)||(21698921-21699142)
chr1 (26-246)||(31926445-31926666)
chr1 (1-244)||(23712994-23713237)
chr1 (1-246)||(36615691-36615924)
chr1 (108-239)||(20823552-20823683)
chr1 (76-246)||(19336640-19336810)
chr1 (3-246)||(43089144-43089375)
chr1 (108-239)||(20837363-20837494)
chr1 (108-239)||(20940997-20941127)
chr1 (79-239)||(16882692-16882851)
chr1 (1-95)||(24237690-24237784)
chr1 (1-246)||(11140248-11140483)
chr1 (26-239)||(29553597-29553800)
chr1 (121-238)||(21736036-21736152)
chr1 (26-246)||(15315646-15315856)
chr1 (113-242)||(23634423-23634552)
chr1 (113-245)||(30490580-30490711)
chr1 (114-239)||(19665863-19665989)
chr1 (121-239)||(21665075-21665192)
chr1 (173-246)||(18419051-18419124)
chr1 (125-239)||(19853936-19854049)
chr1 (173-246)||(20076063-20076136)
chr1 (1-95)||(17150080-17150174)
chr1 (125-239)||(19860071-19860184)
chr1 (173-239)||(24080515-24080580)
chr1 (2-95)||(18026011-18026104)
chr1 (173-246)||(29601410-29601483)
chr1 (177-246)||(36918047-36918116)
chr1 (1-48)||(3706095-3706142)
chr1 (1-48)||(6741281-6741328)
chr1 (177-240)||(24237556-24237619)
chr1 (1-52)||(29150538-29150589)
chr1 (1-48)||(31534606-31534653)
chr1 (1-48)||(31563323-31563370)
chr1 (6-56)||(9292469-9292519)
chr1 (2-48)||(18418890-18418936)
chr1 (173-239)||(28555627-28555693)
chr1 (2-48)||(38907359-38907405)
chr1 (2-48)||(39095087-39095133)
chr1 (173-239)||(42627123-42627189)
chr1 (176-242)||(49328959-49329025)
chr1 (173-246)||(21921718-21921791)
chr1 (187-240)||(47485046-47485099)
chr1 (1-45)||(954422-954466)
chr1 (177-245)||(21963935-21964003)
chr1 (1-48)||(20076250-20076297)
chr1 (173-240)||(20293602-20293669)
chr1 (173-240)||(20300233-20300300)
chr1 (1-48)||(20571506-20571553)
chr1 (158-201)||(20595298-20595341)
chr1 (1-48)||(20595442-20595489)
chr1 (1-48)||(20823743-20823790)
chr1 (173-239)||(17150242-17150307)
chr1 (157-239)||(20243489-20243571)
chr1 (1-95)||(20300072-20300166)
chr1 (2-48)||(48428616-48428662)
chr1 (158-199)||(954277-954318)
chr1 (177-246)||(20396035-20396104)
chr1 (1-94)||(21733703-21733796)
chr1 (187-246)||(24960863-24960921)
chr1 (2-95)||(28555761-28555854)
chr1 (3-48)||(42626963-42627008)
chr1 (173-246)||(48428777-48428850)
chr1 (1-61)||(23634325-23634385)
chr1 (125-239)||(24108162-24108274)
chr1 (1-57)||(37676169-37676225)
chr1 (1-57)||(37682840-37682896)
[»] scaffold0017 (1 HSPs)
scaffold0017 (1-246)||(2097-2342)
[»] scaffold0102 (2 HSPs)
scaffold0102 (3-246)||(30610-30853)
scaffold0102 (26-246)||(45298-45517)
[»] chr3 (90 HSPs)
chr3 (26-246)||(20188560-20188780)
chr3 (26-239)||(13667087-13667300)
chr3 (26-242)||(11849594-11849810)
chr3 (76-246)||(11643948-11644119)
chr3 (26-246)||(15934089-15934309)
chr3 (26-246)||(15954094-15954314)
chr3 (26-244)||(12275080-12275302)
chr3 (26-246)||(17496999-17497219)
chr3 (79-239)||(15519341-15519501)
chr3 (1-95)||(27029039-27029133)
chr3 (2-246)||(13692729-13692962)
chr3 (1-95)||(11963460-11963554)
chr3 (2-246)||(12203084-12203317)
chr3 (1-95)||(16833977-16834071)
chr3 (6-246)||(12153666-12153896)
chr3 (1-246)||(12536873-12537108)
chr3 (3-95)||(27034160-27034252)
chr3 (121-239)||(2269410-2269527)
chr3 (127-244)||(10596825-10596942)
chr3 (173-239)||(18718297-18718363)
chr3 (173-246)||(14570768-14570840)
chr3 (173-239)||(12256530-12256596)
chr3 (1-94)||(11955907-11956000)
chr3 (3-246)||(16822942-16823185)
chr3 (125-246)||(11304911-11305032)
chr3 (121-239)||(12355181-12355298)
chr3 (114-239)||(12364285-12364410)
chr3 (177-246)||(16413451-16413520)
chr3 (1-48)||(15375390-15375437)
chr3 (1-95)||(10768503-10768597)
chr3 (178-239)||(13967799-13967861)
chr3 (178-239)||(13973274-13973336)
chr3 (177-239)||(16834143-16834205)
chr3 (153-239)||(18127719-18127805)
chr3 (153-239)||(18135489-18135575)
chr3 (135-244)||(18756107-18756215)
chr3 (177-239)||(27034026-27034087)
chr3 (1-95)||(45612401-45612495)
chr3 (135-239)||(12960548-12960653)
chr3 (155-238)||(18961849-18961932)
chr3 (173-244)||(8373089-8373160)
chr3 (1-48)||(9690826-9690873)
chr3 (1-48)||(9771277-9771324)
chr3 (177-240)||(11963325-11963388)
chr3 (173-240)||(30596036-30596103)
chr3 (1-111)||(2498337-2498447)
chr3 (177-239)||(6926795-6926857)
chr3 (173-239)||(9771095-9771161)
chr3 (121-239)||(11964087-11964204)
chr3 (1-51)||(12201007-12201057)
chr3 (121-239)||(12478855-12478972)
chr3 (177-239)||(15375557-15375619)
chr3 (177-239)||(16330791-16330853)
chr3 (173-239)||(45612563-45612629)
chr3 (173-239)||(54090912-54090978)
chr3 (26-99)||(18756240-18756313)
chr3 (177-238)||(19343444-19343505)
chr3 (173-246)||(20376413-20376486)
chr3 (173-246)||(29551841-29551914)
chr3 (2-46)||(891889-891933)
chr3 (159-239)||(30099528-30099608)
chr3 (1-48)||(6926967-6927014)
chr3 (177-240)||(11955771-11955834)
chr3 (121-228)||(12361691-12361797)
chr3 (177-240)||(12724306-12724369)
chr3 (28-95)||(12960683-12960750)
chr3 (173-240)||(15081304-15081371)
chr3 (1-48)||(16829299-16829346)
chr3 (1-48)||(16837821-16837868)
chr3 (1-48)||(21150844-21150891)
chr3 (173-240)||(38743821-38743888)
chr3 (1-56)||(48773967-48774022)
chr3 (177-244)||(54832381-54832448)
chr3 (177-239)||(891705-891767)
chr3 (6-48)||(16349383-16349425)
chr3 (6-48)||(16410430-16410472)
chr3 (2-48)||(21352932-21352978)
chr3 (2-48)||(28759615-28759661)
chr3 (2-48)||(47121893-47121939)
chr3 (2-48)||(47129261-47129307)
chr3 (206-240)||(49164108-49164142)
chr3 (2-48)||(50142126-50142172)
chr3 (2-48)||(51246491-51246537)
chr3 (2-48)||(51477602-51477648)
chr3 (173-246)||(2498213-2498286)
chr3 (158-239)||(16382057-16382138)
chr3 (158-239)||(16837640-16837721)
chr3 (173-246)||(28759776-28759849)
chr3 (3-48)||(32387375-32387420)
chr3 (173-246)||(46070281-46070354)
[»] scaffold0011 (7 HSPs)
scaffold0011 (1-246)||(55908-56153)
scaffold0011 (26-246)||(154956-155177)
scaffold0011 (26-246)||(147769-147990)
scaffold0011 (76-239)||(186975-187138)
scaffold0011 (76-239)||(196601-196765)
scaffold0011 (125-239)||(252748-252861)
scaffold0011 (125-239)||(259354-259467)
[»] chr4 (66 HSPs)
chr4 (26-243)||(18272090-18272306)
chr4 (1-246)||(17177145-17177390)
chr4 (26-246)||(10783424-10783635)
chr4 (1-246)||(16485446-16485691)
chr4 (121-246)||(10972075-10972199)
chr4 (26-246)||(18165426-18165636)
chr4 (5-246)||(53904486-53904717)
chr4 (2-246)||(16228260-16228494)
chr4 (127-244)||(13454645-13454762)
chr4 (113-246)||(14991765-14991897)
chr4 (113-246)||(30239934-30240066)
chr4 (177-246)||(33222220-33222289)
chr4 (108-199)||(14555257-14555347)
chr4 (173-244)||(49051919-49051990)
chr4 (173-246)||(7360120-7360193)
chr4 (178-246)||(16157782-16157851)
chr4 (135-239)||(14063640-14063744)
chr4 (113-246)||(15004273-15004405)
chr4 (173-239)||(21882465-21882531)
chr4 (2-246)||(15359964-15360197)
chr4 (27-88)||(30396886-30396947)
chr4 (173-240)||(1584782-1584849)
chr4 (28-95)||(41528367-41528434)
chr4 (155-240)||(900449-900535)
chr4 (154-239)||(37882350-37882435)
chr4 (34-95)||(46044169-46044230)
chr4 (173-246)||(52501423-52501496)
chr4 (4-56)||(45141863-45141915)
chr4 (1-48)||(3265943-3265990)
chr4 (177-240)||(30397027-30397090)
chr4 (173-240)||(42221304-42221371)
chr4 (1-48)||(43284227-43284274)
chr4 (1-48)||(52501261-52501308)
chr4 (173-239)||(392040-392106)
chr4 (1-95)||(3259268-3259362)
chr4 (2-48)||(29447999-29448045)
chr4 (177-239)||(33097972-33098034)
chr4 (173-239)||(37622449-37622515)
chr4 (1-95)||(47870337-47870431)
chr4 (173-246)||(3259127-3259200)
chr4 (177-246)||(5939803-5939872)
chr4 (189-246)||(19127476-19127533)
chr4 (158-239)||(23723942-23724023)
chr4 (177-246)||(29381899-29381968)
chr4 (158-239)||(43284045-43284126)
chr4 (2-51)||(44657089-44657138)
chr4 (28-100)||(14063543-14063615)
chr4 (1-48)||(13480331-13480378)
chr4 (160-239)||(14487544-14487623)
chr4 (173-236)||(15325836-15325899)
chr4 (1-48)||(21397527-21397574)
chr4 (1-48)||(23122406-23122453)
chr4 (1-48)||(23724123-23724170)
chr4 (1-56)||(45959058-45959113)
chr4 (1-48)||(50082931-50082978)
chr4 (2-48)||(391879-391925)
chr4 (2-48)||(26396400-26396446)
chr4 (2-48)||(29382088-29382134)
chr4 (2-48)||(29454683-29454729)
chr4 (1-39)||(37882208-37882246)
chr4 (158-199)||(11170429-11170470)
chr4 (26-95)||(15325699-15325768)
chr4 (26-95)||(49051784-49051853)
chr4 (1-57)||(11937883-11937939)
chr4 (179-239)||(26076910-26076970)
chr4 (1-53)||(33222053-33222105)
[»] scaffold0205 (1 HSPs)
scaffold0205 (26-246)||(28064-28285)
[»] scaffold1290 (1 HSPs)
scaffold1290 (26-246)||(401-621)
[»] chr6 (53 HSPs)
chr6 (26-246)||(5289072-5289292)
chr6 (1-246)||(22797651-22797896)
chr6 (1-246)||(23020520-23020753)
chr6 (76-246)||(19468699-19468869)
chr6 (28-246)||(23232558-23232764)
chr6 (1-111)||(10463496-10463606)
chr6 (26-246)||(18315109-18315330)
chr6 (3-246)||(24721401-24721633)
chr6 (1-239)||(14615432-14615660)
chr6 (162-246)||(18787033-18787118)
chr6 (28-95)||(2709184-2709251)
chr6 (121-239)||(19819786-19819903)
chr6 (173-246)||(10469888-10469961)
chr6 (173-246)||(13127436-13127509)
chr6 (177-242)||(34133120-34133185)
chr6 (155-239)||(29926601-29926685)
chr6 (155-242)||(17414948-17415040)
chr6 (173-239)||(4107512-4107578)
chr6 (206-246)||(10582549-10582589)
chr6 (1-48)||(14132369-14132416)
chr6 (1-48)||(16222997-16223044)
chr6 (1-48)||(24363328-24363375)
chr6 (1-48)||(24369919-24369966)
chr6 (1-48)||(25464603-25464650)
chr6 (1-48)||(28289528-28289575)
chr6 (173-239)||(1071587-1071653)
chr6 (178-239)||(24563430-24563492)
chr6 (1-95)||(26417946-26418040)
chr6 (173-239)||(27768282-27768348)
chr6 (173-246)||(24363489-24363562)
chr6 (173-246)||(24370080-24370153)
chr6 (2-51)||(29159781-29159830)
chr6 (1-48)||(1593535-1593582)
chr6 (177-240)||(8068851-8068914)
chr6 (177-240)||(10463377-10463439)
chr6 (173-244)||(13941355-13941426)
chr6 (177-232)||(17881969-17882023)
chr6 (188-239)||(19440661-19440712)
chr6 (173-239)||(19587731-19587798)
chr6 (1-48)||(19727412-19727459)
chr6 (1-48)||(21724081-21724128)
chr6 (125-242)||(26417809-26417926)
chr6 (2-48)||(15331458-15331504)
chr6 (2-48)||(17310429-17310475)
chr6 (177-239)||(19095946-19096008)
chr6 (2-48)||(19096127-19096173)
chr6 (173-239)||(30798844-30798910)
chr6 (2-48)||(30799025-30799071)
chr6 (158-239)||(933652-933733)
chr6 (26-95)||(17414821-17414890)
chr6 (158-239)||(19727559-19727640)
chr6 (158-239)||(22907858-22907939)
chr6 (135-239)||(14374519-14374624)
[»] scaffold0261 (1 HSPs)
scaffold0261 (26-246)||(8410-8629)
[»] chr5 (78 HSPs)
chr5 (26-240)||(23443370-23443584)
chr5 (26-246)||(21830332-21830542)
chr5 (26-246)||(15193131-15193351)
chr5 (1-95)||(23081307-23081401)
chr5 (1-246)||(21889355-21889601)
chr5 (1-246)||(19363337-19363570)
chr5 (1-246)||(427990-428225)
chr5 (2-246)||(23560734-23560968)
chr5 (1-95)||(23075594-23075688)
chr5 (1-93)||(18940519-18940611)
chr5 (136-238)||(6403651-6403753)
chr5 (5-111)||(20843840-20843946)
chr5 (177-246)||(598138-598207)
chr5 (26-95)||(23544163-23544232)
chr5 (173-239)||(33536968-33537034)
chr5 (177-242)||(17938047-17938112)
chr5 (155-240)||(18940382-18940467)
chr5 (173-246)||(19509041-19509114)
chr5 (155-239)||(19799040-19799124)
chr5 (178-246)||(22006881-22006950)
chr5 (156-239)||(27635023-27635107)
chr5 (173-240)||(15462345-15462412)
chr5 (1-48)||(20991062-20991109)
chr5 (1-47)||(7772997-7773043)
chr5 (1-95)||(15462183-15462277)
chr5 (2-56)||(19799681-19799735)
chr5 (1-95)||(22232001-22232095)
chr5 (2-95)||(5581591-5581684)
chr5 (155-240)||(23544028-23544113)
chr5 (178-246)||(20844004-20844071)
chr5 (1-48)||(5455201-5455248)
chr5 (173-240)||(18567463-18567530)
chr5 (1-48)||(20341251-20341298)
chr5 (177-240)||(25420749-25420812)
chr5 (1-48)||(43029754-43029801)
chr5 (1-95)||(19508878-19508972)
chr5 (173-239)||(19799509-19799575)
chr5 (1-239)||(22237020-22237248)
chr5 (177-239)||(22380411-22380472)
chr5 (177-239)||(23075459-23075521)
chr5 (177-239)||(23081172-23081234)
chr5 (173-246)||(5455362-5455435)
chr5 (158-239)||(20938547-20938628)
chr5 (177-246)||(22501855-22501924)
chr5 (177-246)||(22508436-22508505)
chr5 (177-246)||(25847214-25847283)
chr5 (177-246)||(25853795-25853864)
chr5 (154-246)||(21495818-21495910)
chr5 (4-48)||(24799730-24799774)
chr5 (186-246)||(25014541-25014601)
chr5 (1-48)||(1111028-1111075)
chr5 (211-246)||(7772808-7772843)
chr5 (1-56)||(14881654-14881709)
chr5 (1-56)||(14888331-14888386)
chr5 (1-48)||(17938231-17938278)
chr5 (173-240)||(20341412-20341479)
chr5 (1-48)||(20347855-20347902)
chr5 (173-240)||(20348016-20348083)
chr5 (1-48)||(20938400-20938447)
chr5 (177-240)||(24058523-24058586)
chr5 (177-240)||(26651320-26651383)
chr5 (177-240)||(26922905-26922968)
chr5 (173-239)||(5581457-5581523)
chr5 (2-48)||(14614299-14614345)
chr5 (177-239)||(16774222-16774284)
chr5 (2-48)||(18894345-18894391)
chr5 (2-48)||(22247586-22247632)
chr5 (2-48)||(24008766-24008812)
chr5 (26-132)||(25014381-25014487)
chr5 (2-48)||(25847048-25847094)
chr5 (2-48)||(25853629-25853675)
chr5 (2-56)||(33536807-33536861)
chr5 (123-239)||(22231867-22231982)
chr5 (158-239)||(22311975-22312056)
chr5 (173-246)||(30781940-30782013)
chr5 (1-53)||(21901184-21901236)
chr5 (4-48)||(29745943-29745987)
chr5 (188-240)||(39608038-39608090)
[»] scaffold0001 (3 HSPs)
scaffold0001 (26-246)||(448801-449021)
scaffold0001 (1-246)||(179753-179986)
scaffold0001 (173-240)||(511753-511820)
[»] chr8 (74 HSPs)
chr8 (1-246)||(36444892-36445138)
chr8 (26-246)||(21685213-21685433)
chr8 (26-246)||(21689562-21689782)
chr8 (1-95)||(27890646-27890740)
chr8 (1-95)||(27896979-27897073)
chr8 (1-95)||(27902885-27902979)
chr8 (1-95)||(27949304-27949398)
chr8 (79-246)||(20839068-20839234)
chr8 (76-239)||(19987332-19987495)
chr8 (26-242)||(21682835-21683040)
chr8 (134-246)||(19860444-19860555)
chr8 (72-246)||(20007107-20007280)
chr8 (121-242)||(20258144-20258264)
chr8 (121-242)||(21044774-21044894)
chr8 (1-93)||(29298353-29298445)
chr8 (1-239)||(31411650-31411876)
chr8 (6-93)||(29304904-29304991)
chr8 (1-239)||(31417832-31418058)
chr8 (173-240)||(7003208-7003275)
chr8 (164-246)||(20004842-20004923)
chr8 (1-95)||(35541761-35541855)
chr8 (177-242)||(4519865-4519930)
chr8 (177-242)||(22459027-22459092)
chr8 (1-48)||(10956005-10956052)
chr8 (173-239)||(6588994-6589060)
chr8 (177-239)||(27890813-27890874)
chr8 (177-239)||(27897146-27897207)
chr8 (177-239)||(27903052-27903113)
chr8 (177-239)||(27949471-27949532)
chr8 (178-239)||(30765910-30765972)
chr8 (173-246)||(14564421-14564494)
chr8 (173-246)||(14567954-14568027)
chr8 (177-246)||(27346592-27346661)
chr8 (1-48)||(10947923-10947970)
chr8 (1-48)||(16886617-16886664)
chr8 (1-48)||(29328958-29329005)
chr8 (172-239)||(37240503-37240570)
chr8 (190-244)||(5240096-5240150)
chr8 (2-48)||(12913573-12913619)
chr8 (173-239)||(13361296-13361362)
chr8 (1-51)||(22024903-22024953)
chr8 (2-48)||(22178394-22178440)
chr8 (177-239)||(41008619-41008680)
chr8 (173-239)||(43688313-43688379)
chr8 (1-58)||(7003380-7003437)
chr8 (173-246)||(16266001-16266074)
chr8 (158-239)||(22178540-22178621)
chr8 (173-246)||(23654336-23654409)
chr8 (173-246)||(27364224-27364296)
chr8 (173-246)||(35541923-35541996)
chr8 (76-132)||(14593996-14594052)
chr8 (1-57)||(23117941-23117997)
chr8 (1-48)||(1264831-1264878)
chr8 (1-48)||(3224003-3224050)
chr8 (1-48)||(4520049-4520096)
chr8 (1-48)||(6588832-6588879)
chr8 (1-48)||(22062909-22062956)
chr8 (1-48)||(23224017-23224064)
chr8 (28-95)||(41008752-41008819)
chr8 (2-48)||(852228-852274)
chr8 (174-244)||(3223817-3223887)
chr8 (2-48)||(9204670-9204716)
chr8 (173-239)||(11391746-11391812)
chr8 (2-48)||(14736140-14736186)
chr8 (173-239)||(14745658-14745724)
chr8 (157-239)||(22024725-22024807)
chr8 (1-95)||(22744504-22744598)
chr8 (164-204)||(20773242-20773283)
chr8 (164-204)||(20783036-20783077)
chr8 (179-236)||(21669738-21669795)
chr8 (158-239)||(22056672-22056753)
chr8 (3-48)||(22458863-22458908)
chr8 (173-242)||(23223834-23223903)
chr8 (4-48)||(27346429-27346473)
[»] scaffold0556 (1 HSPs)
scaffold0556 (1-246)||(4138-4383)
[»] scaffold0114 (1 HSPs)
scaffold0114 (1-246)||(46993-47238)
[»] scaffold0947 (1 HSPs)
scaffold0947 (76-243)||(3347-3514)
[»] scaffold0211 (2 HSPs)
scaffold0211 (143-246)||(10304-10407)
scaffold0211 (1-177)||(10134-10311)
[»] scaffold0516 (1 HSPs)
scaffold0516 (121-246)||(7059-7184)
[»] scaffold0149 (1 HSPs)
scaffold0149 (26-246)||(14092-14312)
[»] scaffold0007 (1 HSPs)
scaffold0007 (26-241)||(206869-207084)
[»] scaffold0924 (1 HSPs)
scaffold0924 (26-246)||(3065-3285)
[»] scaffold0243 (1 HSPs)
scaffold0243 (1-239)||(11473-11711)
[»] scaffold0923 (1 HSPs)
scaffold0923 (26-246)||(650-859)
[»] scaffold0434 (1 HSPs)
scaffold0434 (2-246)||(483-727)
[»] scaffold0661 (1 HSPs)
scaffold0661 (1-246)||(3196-3441)
[»] scaffold0342 (1 HSPs)
scaffold0342 (108-240)||(16020-16151)
[»] scaffold0334 (1 HSPs)
scaffold0334 (3-246)||(9250-9483)
[»] scaffold0037 (2 HSPs)
scaffold0037 (3-246)||(45135-45368)
scaffold0037 (173-239)||(100835-100900)
[»] scaffold0405 (2 HSPs)
scaffold0405 (31-242)||(2455-2656)
scaffold0405 (26-242)||(11163-11369)
[»] scaffold0003 (2 HSPs)
scaffold0003 (1-95)||(160797-160890)
scaffold0003 (177-239)||(160663-160724)
[»] scaffold0326 (2 HSPs)
scaffold0326 (26-246)||(4523-4742)
scaffold0326 (26-246)||(19705-19924)
[»] scaffold0301 (1 HSPs)
scaffold0301 (2-246)||(4012-4246)
[»] scaffold0156 (1 HSPs)
scaffold0156 (2-246)||(26389-26622)
[»] scaffold0126 (1 HSPs)
scaffold0126 (114-239)||(45104-45228)
[»] scaffold0010 (2 HSPs)
scaffold0010 (114-239)||(43255-43380)
scaffold0010 (114-239)||(48321-48446)
[»] scaffold0402 (1 HSPs)
scaffold0402 (76-246)||(15800-15970)
[»] scaffold0081 (1 HSPs)
scaffold0081 (26-204)||(55117-55296)
[»] scaffold0004 (2 HSPs)
scaffold0004 (28-239)||(321891-322092)
scaffold0004 (28-236)||(327579-327777)
[»] scaffold0002 (1 HSPs)
scaffold0002 (76-239)||(371251-371414)
[»] scaffold1584 (1 HSPs)
scaffold1584 (127-244)||(1236-1353)
[»] scaffold0113 (1 HSPs)
scaffold0113 (153-246)||(26769-26862)
[»] scaffold0220 (1 HSPs)
scaffold0220 (121-239)||(11270-11387)
[»] scaffold0025 (2 HSPs)
scaffold0025 (157-239)||(72033-72115)
scaffold0025 (75-246)||(77593-77765)
[»] scaffold0574 (1 HSPs)
scaffold0574 (135-244)||(5047-5155)
[»] scaffold0299 (1 HSPs)
scaffold0299 (114-236)||(3228-3346)
[»] scaffold0035 (2 HSPs)
scaffold0035 (2-246)||(1334-1568)
scaffold0035 (2-240)||(11215-11442)
[»] scaffold0167 (1 HSPs)
scaffold0167 (79-239)||(7796-7956)
[»] scaffold0751 (1 HSPs)
scaffold0751 (4-246)||(1207-1439)
[»] scaffold0193 (1 HSPs)
scaffold0193 (136-246)||(2067-2175)
[»] scaffold0015 (1 HSPs)
scaffold0015 (1-239)||(170961-171189)
[»] scaffold0091 (2 HSPs)
scaffold0091 (114-246)||(21906-22038)
scaffold0091 (114-246)||(26103-26235)
[»] scaffold0054 (2 HSPs)
scaffold0054 (26-246)||(59586-59806)
scaffold0054 (1-246)||(61150-61394)
[»] scaffold0050 (1 HSPs)
scaffold0050 (26-246)||(13633-13853)
[»] scaffold0583 (2 HSPs)
scaffold0583 (1-90)||(282-371)
scaffold0583 (155-239)||(426-511)
[»] scaffold0022 (3 HSPs)
scaffold0022 (121-246)||(37810-37935)
scaffold0022 (121-246)||(135871-135995)
scaffold0022 (177-244)||(105216-105283)
[»] scaffold0139 (1 HSPs)
scaffold0139 (121-239)||(26789-26906)
[»] scaffold0106 (3 HSPs)
scaffold0106 (121-239)||(45909-46026)
scaffold0106 (121-239)||(50182-50299)
scaffold0106 (187-246)||(37080-37138)
[»] scaffold0078 (2 HSPs)
scaffold0078 (1-111)||(16704-16814)
scaffold0078 (173-246)||(16579-16652)
[»] scaffold0074 (1 HSPs)
scaffold0074 (173-239)||(21132-21198)
[»] scaffold0108 (1 HSPs)
scaffold0108 (154-246)||(46456-46547)
[»] scaffold0555 (2 HSPs)
scaffold0555 (76-246)||(2250-2420)
scaffold0555 (173-246)||(97-170)
[»] scaffold0060 (2 HSPs)
scaffold0060 (1-93)||(41942-42034)
scaffold0060 (155-239)||(42086-42170)
[»] scaffold0104 (2 HSPs)
scaffold0104 (134-244)||(26946-27055)
scaffold0104 (134-244)||(28328-28437)
[»] scaffold1032 (1 HSPs)
scaffold1032 (1-95)||(2917-3011)
[»] scaffold0192 (1 HSPs)
scaffold0192 (134-236)||(7515-7616)
[»] scaffold0093 (3 HSPs)
scaffold0093 (177-239)||(25576-25638)
scaffold0093 (177-239)||(36244-36306)
scaffold0093 (177-239)||(42651-42713)
[»] scaffold0331 (1 HSPs)
scaffold0331 (2-246)||(19298-19532)
[»] scaffold1853 (1 HSPs)
scaffold1853 (3-229)||(1-227)
[»] scaffold0009 (4 HSPs)
scaffold0009 (7-95)||(254290-254378)
scaffold0009 (1-95)||(247772-247866)
scaffold0009 (157-240)||(254430-254514)
scaffold0009 (157-240)||(247918-248002)
[»] scaffold0323 (1 HSPs)
scaffold0323 (127-239)||(8163-8275)
[»] scaffold0320 (2 HSPs)
scaffold0320 (1-55)||(1658-1712)
scaffold0320 (136-239)||(1782-1886)
[»] scaffold0096 (1 HSPs)
scaffold0096 (2-246)||(3675-3909)
[»] scaffold0244 (3 HSPs)
scaffold0244 (186-246)||(777-837)
scaffold0244 (186-246)||(14586-14646)
scaffold0244 (1-95)||(14402-14496)
[»] scaffold0173 (2 HSPs)
scaffold0173 (178-246)||(2258-2326)
scaffold0173 (26-95)||(2117-2186)
[»] scaffold0652 (2 HSPs)
scaffold0652 (177-240)||(2200-2263)
scaffold0652 (1-92)||(2033-2124)
[»] scaffold0191 (1 HSPs)
scaffold0191 (173-240)||(10677-10744)
[»] scaffold0706 (1 HSPs)
scaffold0706 (121-239)||(2514-2631)
[»] scaffold0466 (2 HSPs)
scaffold0466 (177-239)||(12019-12081)
scaffold0466 (1-48)||(11853-11900)
[»] scaffold0457 (2 HSPs)
scaffold0457 (173-239)||(11395-11461)
scaffold0457 (1-48)||(11576-11623)
[»] scaffold0560 (2 HSPs)
scaffold0560 (177-246)||(181-250)
scaffold0560 (6-56)||(362-412)
[»] scaffold0348 (3 HSPs)
scaffold0348 (134-199)||(1194-1258)
scaffold0348 (158-239)||(14654-14735)
scaffold0348 (158-201)||(3946-3989)
[»] scaffold0239 (3 HSPs)
scaffold0239 (158-239)||(13639-13720)
scaffold0239 (1-48)||(6537-6584)
scaffold0239 (1-48)||(13820-13867)
[»] scaffold0154 (2 HSPs)
scaffold0154 (173-246)||(17581-17654)
scaffold0154 (5-48)||(17768-17811)
[»] scaffold0088 (2 HSPs)
scaffold0088 (185-246)||(32509-32570)
scaffold0088 (6-56)||(32339-32389)
[»] scaffold1026 (1 HSPs)
scaffold1026 (1-48)||(16-63)
[»] scaffold0523 (2 HSPs)
scaffold0523 (1-48)||(7068-7115)
scaffold0523 (173-246)||(6880-6953)
[»] scaffold0518 (2 HSPs)
scaffold0518 (1-48)||(8273-8320)
scaffold0518 (158-239)||(8421-8502)
[»] scaffold0310 (2 HSPs)
scaffold0310 (1-48)||(16836-16883)
scaffold0310 (211-246)||(17036-17071)
[»] scaffold0072 (1 HSPs)
scaffold0072 (28-95)||(56689-56756)
[»] scaffold0065 (1 HSPs)
scaffold0065 (28-95)||(27051-27118)
[»] scaffold0034 (3 HSPs)
scaffold0034 (173-244)||(14816-14887)
scaffold0034 (126-199)||(5805-5878)
scaffold0034 (173-244)||(9252-9323)
[»] scaffold0076 (1 HSPs)
scaffold0076 (173-239)||(983-1049)
[»] scaffold0023 (2 HSPs)
scaffold0023 (157-239)||(19658-19740)
scaffold0023 (26-95)||(152634-152703)
[»] scaffold0005 (4 HSPs)
scaffold0005 (1-47)||(265894-265940)
scaffold0005 (1-48)||(259479-259526)
scaffold0005 (158-239)||(259626-259707)
scaffold0005 (158-239)||(266041-266122)
[»] scaffold0124 (1 HSPs)
scaffold0124 (155-242)||(10185-10274)
[»] scaffold0089 (1 HSPs)
scaffold0089 (1-46)||(17876-17921)
[»] scaffold0053 (2 HSPs)
scaffold0053 (26-95)||(46019-46088)
scaffold0053 (26-95)||(72190-72259)
[»] scaffold0201 (1 HSPs)
scaffold0201 (1-93)||(27096-27188)
[»] scaffold0214 (1 HSPs)
scaffold0214 (1-56)||(14562-14617)
[»] scaffold0158 (1 HSPs)
scaffold0158 (158-201)||(15344-15387)
[»] scaffold0155 (1 HSPs)
scaffold0155 (1-48)||(31586-31633)
[»] scaffold0118 (1 HSPs)
scaffold0118 (173-240)||(8088-8155)
[»] scaffold0103 (2 HSPs)
scaffold0103 (1-48)||(20369-20416)
scaffold0103 (1-48)||(23168-23215)
[»] scaffold0097 (1 HSPs)
scaffold0097 (28-95)||(28669-28736)
[»] scaffold0071 (1 HSPs)
scaffold0071 (1-48)||(50293-50340)
[»] scaffold0019 (1 HSPs)
scaffold0019 (177-240)||(138006-138069)
[»] scaffold0276 (1 HSPs)
scaffold0276 (2-48)||(21434-21480)
[»] scaffold1726 (1 HSPs)
scaffold1726 (6-95)||(1074-1163)
[»] scaffold0395 (1 HSPs)
scaffold0395 (187-246)||(1358-1416)
[»] scaffold0335 (1 HSPs)
scaffold0335 (187-246)||(7661-7719)
[»] scaffold0298 (2 HSPs)
scaffold0298 (26-95)||(19150-19219)
scaffold0298 (170-242)||(19298-19371)
[»] scaffold0121 (1 HSPs)
scaffold0121 (170-242)||(10215-10288)
[»] scaffold0101 (1 HSPs)
scaffold0101 (158-239)||(5923-6004)
[»] scaffold0068 (2 HSPs)
scaffold0068 (1-53)||(51200-51252)
scaffold0068 (1-53)||(64648-64700)
[»] scaffold0026 (1 HSPs)
scaffold0026 (154-246)||(36514-36606)


Alignment Details
Target: chr2 (Bit Score: 149; Significance: 8e-79; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 26 - 246
Target Start/End: Original strand, 20648902 - 20649122
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    ||||| |||||||| |||||||| ||| || | |||||  ||| | |||||||||||||||||||||||| ||| | |||||||||||||||||||||||    
T  20648902 ttcacaccccaaattagtttacagatgcaagaataagtgatgtatgcaaccagaacctaattctaacatcagaacaacaatttctatactcaattcactc 20649001  T
Q  126 aaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacc 225  Q
    ||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  20649002 aaaaacccataatccaacataaaccccaaaattcccaattctatcataaacctgttaaatccaaaatcagaattaaataactatactactgaagcaaacc 20649101  T
Q  226 tcacccttaccttaattcaga 246  Q
    |||||||||||||||||||||    
T  20649102 tcacccttaccttaattcaga 20649122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 25268003 - 25268248
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaat 100  Q
    |||||||||||  ||||||||    ||||||||||||||||||||||| || ||||||||||| |||| | ||||||||||||| |||||||||| |||     
T  25268003 tcccaaaaatccaattttcctcaaattcactccccaaatcagtttacagatataaaactaagtgctgtatgcaaccagaacctatttctaacatcagaac 25268102  T
Q  101 agcaatttctatactcaattcactcaaaaacccat-aattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaatt 199  Q
    | |||| | || ||||||||||||||||||||||| ||| || ||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  25268103 atcaatctatacactcaattcactcaaaaacccattaatccaacataacccc-aaatttcccaattctatcataaacctgttaaatccaaaatcagaatt 25268201  T
Q  200 caataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||| |||||||||||||||||| ||||||||||||||||||||||||    
T  25268202 caaaaactatactactgaagcaaacctcacccttaccttaattcaga 25268248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 26 - 246
Target Start/End: Original strand, 22860794 - 22861014
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    |||||||||||||| |||||||||||| ||||||||||  ||| | |||||||||||||||||||||||| ||| | |||| |||| |||||||||||||    
T  22860794 ttcactccccaaattagtttacatatgcaaaactaagtgttgtatgcaaccagaacctaattctaacatcagaacaacaatctctacactcaattcactc 22860893  T
Q  126 aaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacc 225  Q
    ||||||||||||| || ||||||||| |||||| |||||| ||||||||||||||||||  |||||||||||||||| ||||||| |||||||||| | |    
T  22860894 aaaaacccataatccaacataaaccccaaaatttccaattatatcataaacctgttaaaatcaaaatcagaattcaacaactatattactgaagcaaatc 22860993  T
Q  226 tcacccttaccttaattcaga 246  Q
    |||||||||||||||||||||    
T  22860994 tcacccttaccttaattcaga 22861014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 8889344 - 8889103
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaat 100  Q
    ||||||||||| |||||||||    |||||||||||||| |||||||| || | ||||||| | |||| | |||||| |||||| |||| |||||  ||     
T  8889344 tcccaaaaatcccattttcctcaaattcactccccaaattagtttacagatatgaaactaaatgctgtatgcaaccataacctatttctcacatcaaaac 8889245  T
Q  101 agcaatttctatactcaattcactcaaaaacccataattcac-cataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaatt 199  Q
    |||||| |||| |||||||||||||||| |||||| | |||  ||||||||| |||||||||| ||| ||||||||||||||||| ||||||||||||||    
T  8889244 agcaatctctacactcaattcactcaaagacccattaatcaaacataaaccccaaaattccca-ttccatcataaacctgttaaacccaaaatcagaatt 8889146  T
Q  200 caataactatactactgaagcagacctcacccttaccttaatt 242  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  8889145 caataactatactactgaagcaaacctcacccttaccttaatt 8889103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 114 - 239
Target Start/End: Original strand, 23291838 - 23291963
Alignment:
Q  114 ctcaattcactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatacta 213  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||||||||||||   |||||||||||||||  |||||||||||||||||| ||||||||    
T  23291838 ctcaattcactcacaaacccataattcaacataaaccccaaaattcccaattcccacataaacctgttaaaatcaaaatcagaattcaatatctatacta 23291937  T
Q  214 ctgaagcagacctcacccttacctta 239  Q
    |||||||| |||||||||||||||||    
T  23291938 ctgaagcaaacctcacccttacctta 23291963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 103 - 239
Target Start/End: Original strand, 23333467 - 23333603
Alignment:
Q  103 caatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaa 202  Q
    |||| |||| |||||||||||||| |||||||||||||| ||||||||| ||||||||||||||   | |||||||||||||  ||||||||||||||||    
T  23333467 caatctctacactcaattcactcacaaacccataattcaacataaaccccaaaattcccaattcccacgtaaacctgttaaaatcaaaatcagaattcaa 23333566  T
Q  203 taactatactactgaagcagacctcacccttacctta 239  Q
    || |||||||||||||||| |||||||||||||||||    
T  23333567 tatctatactactgaagcaaacctcacccttacctta 23333603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 26 - 246
Target Start/End: Complemental strand, 25106819 - 25106598
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    ||||||||||||||||||||||| |||| |||  || || ||| | ||  ||||||||| |||| |||||  || |||||| |||| |||||| |||| |    
T  25106819 ttcactccccaaatcagtttacagatgtgaaatgaaatattgtatgcactcagaacctatttctgacatcaaaacagcaatctctacactcaaatcaccc 25106720  T
Q  126 aaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgtt-aaatccaaaatcagaattcaataactatactactgaagcagac 224  Q
    ||||||| | |||||| ||||||||| ||||||||||||| ||| ||||||||||| ||||| |||||||||||| |  | ||| |||||||||| | ||    
T  25106719 aaaaacctagaattcaacataaaccccaaaattcccaattttattataaacctgttaaaatcaaaaatcagaattaagcatctacactactgaagtaaac 25106620  T
Q  225 ctcacccttaccttaattcaga 246  Q
    ||||||||||||||||||||||    
T  25106619 ctcacccttaccttaattcaga 25106598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 113 - 246
Target Start/End: Original strand, 19036394 - 19036528
Alignment:
Q  113 actcaattcactcaaaaacccat-aattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattcaataactata 210  Q
    ||||||||| ||||||||  ||| ||| || ||||||||| ||||| ||||||| ||| ||  ||||||||||||| |||||||||||||||||||||||    
T  19036394 actcaattcgctcaaaaattcattaatccaacataaaccc-aaaatccccaatttctaccaataacctgttaaatcaaaaatcagaattcaataactata 19036492  T
Q  211 ctactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||||| ||||||||||||||||||||||||    
T  19036493 ctactgaagcaaacctcacccttaccttaattcaga 19036528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 24659680 - 24659812
Alignment:
Q  108 tctatactcaattcactca-aaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataac 206  Q
    ||||| ||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||  |||||||||||||||  ||||||||||||| |  |||    
T  24659680 tctatgctcaattcactcagaaaacccataattcaacataaaccccaaaattcccaattctcacataaacctgttaaaatcaaaatcagaatttatcaac 24659779  T
Q  207 tatactactgaagcagacctcacccttacctta 239  Q
    || |||| ||||  | |||||||||||||||||    
T  24659780 tacactattgaaataaacctcacccttacctta 24659812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 76 - 239
Target Start/End: Original strand, 23753664 - 23753827
Alignment:
Q  76 cagaacctaattctaacatctgaatagcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaa 175  Q
    ||||||||| |||||||||| ||| | ||||||||| ||||||||||| |||||||| | |||||| || |||||| |||||||||||||||  ||||||    
T  23753664 cagaacctatttctaacatcagaacaacaatttctacactcaattcacccaaaaacctagaattcatcaaaaaccccaaaattcccaattctcacataaa 23753763  T
Q  176 cctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
     ||||||||  ||||||||||||| |  ||||| |||| ||||  | || ||||||||||||||    
T  23753764 tctgttaaaatcaaaatcagaatttatcaactacactattgaaataaacttcacccttacctta 23753827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 24653116 - 24653355
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaat 100  Q
    ||||||||||| |||||||||    |||||||||||||| ||||||||||| | |||  || | ||||  |||  ||||||||| |||||||  |  ||     
T  24653116 tcccaaaaatcccattttcctcaaattcactccccaaattagtttacatatatgaaatgaaatgctgtacacactcagaacctatttctaaccccaaaac 24653215  T
Q  101 agcaatttctatactcaattcactca-aaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaatt 199  Q
    | |||  ||||  ||||||||||||| |||||||||||||||  |||||||| |||||||||||||||  |||||||||||||||  |||||||||||||    
T  24653216 atcaacctctacgctcaattcactcagaaaacccataattcaaaataaaccccaaaattcccaattctcacataaacctgttaaaatcaaaatcagaatt 24653315  T
Q  200 caataactatactactgaagcagacctcacccttacctta 239  Q
     |  ||||| |||| ||||  | |||||||||||||||||    
T  24653316 tatcaactacactattgaaataaacctcacccttacctta 24653355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 127 - 244
Target Start/End: Complemental strand, 19648805 - 19648688
Alignment:
Q  127 aaaacccat-aattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacc 225  Q
    ||||||||| |||||| ||||||||| ||| ||||||||||||||||||||||||||||   ||||||||||| ||||| |||||||||||||| | | |    
T  19648805 aaaacccattaattcatcataaaccc-aaatttcccaattctatcataaacctgttaaaattaaaatcagaatccaatatctatactactgaagtaaaac 19648707  T
Q  226 tcacccttaccttaattca 244  Q
    |||||||||||||||||||    
T  19648706 tcacccttaccttaattca 19648688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 2 - 246
Target Start/End: Original strand, 25174670 - 25174904
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaata 101  Q
    |||||||||| ||||||||| |  |||||||||||||| |||||||| ||| ||||||||||  ||| | |||||||||||||||||||| ||| ||| |    
T  25174670 cccaaaaatcccattttcctccaattcactccccaaattagtttacagatgcaaaactaagtgttgtatgcaaccagaacctaattctaatatcagaaca 25174769  T
Q  102 gcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattc 200  Q
    ||||| ||||         |||  |||| || |||||||| |||||| || ||||||||||||| ||| || |||| |||||||  |||||| |||||      
T  25174770 gcaatctcta---------caccgaaaacccaataattcatcataaa-cctaaaattcccaattcctacca-aaacttgttaaactcaaaattagaatca 25174858  T
Q  201 aataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
     | | |||||||||||||||| ||||||||||||||||||||||||    
T  25174859 gacatctatactactgaagcaaacctcacccttaccttaattcaga 25174904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 23672095 - 23671978
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaat 100  Q
    ||||||||||| |||||||||    |||||||||||||| |||||||||||| ||||||||||  ||| | |||||| ||||||||||||||||| |||     
T  23672095 tcccaaaaatcccattttcctcaaattcactccccaaattagtttacatatgcaaaactaagtgttgtatgcaaccaaaacctaattctaacatcagaac 23671996  T
Q  101 agcaatttctatactcaa 118  Q
    |||||| |||| ||||||    
T  23671995 agcaatctctacactcaa 23671978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 4078185 - 4078279
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||| ||  | || |||||  | | | ||||||||||||||||||||||||    
T  4078185 tcccaaaaatctcattttccttccaatcactccccaaatcagtttacagatacataattaagtgttctatgcaaccagaacctaattctaacatc 4078279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 22012344 - 22012271
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||||||  ||||||||||| |||||||||| |||| ||||| | ||||||||||||||||||||||||    
T  22012344 aaacctgttaaactcaaaatcagaaatcaataactacactattgaagtaaacctcacccttaccttaattcaga 22012271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 35243767 - 35243694
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||||||  ||||||||||| |||||||||| |||| ||||| | ||||||||||||||||||||||||    
T  35243767 aaacctgttaaactcaaaatcagaaatcaataactacactattgaagtaaacctcacccttaccttaattcaga 35243694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 22812917 - 22813021
Alignment:
Q  135 taattcaccataaacccgaaaattcccaatt--ctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcaccct 232  Q
    ||||||| ||||||||  |||||||||||||  ||| || ||||||||||||  |||||||||||||||  | |||||||| ||||||| ||||||||||    
T  22812917 taattcaacataaacct-aaaattcccaattttctacca-aaacctgttaaactcaaaatcagaattcagaatctatactaatgaagcaaacctcaccct 22813014  T
Q  233 tacctta 239  Q
    |||||||    
T  22813015 tacctta 22813021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 44090457 - 44090363
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    ||||||||||| ||||||||||||  |||||||||||||||||||||| ||  | || |||||  | | | ||||||||| ||||||||||||||    
T  44090457 tcccaaaaatcccattttccttccaatcactccccaaatcagtttacagatacataattaagtgttctatgcaaccagaaactaattctaacatc 44090363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 246
Target Start/End: Complemental strand, 20913523 - 20913463
Alignment:
Q  186 ccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    |||||||||||||| || | |||||||||||||| | |||||||||||||||||| |||||    
T  20913523 ccaaaatcagaatttaaaatctatactactgaagtaaacctcacccttaccttaaatcaga 20913463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 28970500 - 28970416
Alignment:
Q  156 attcccaattctatcataaacct-gttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||||| |||||| || ||||||  ||||||||||||| || | ||||||||| |||||| || ||||||||||||||    
T  28970500 attcccaattctaacataaaacttgttaaaatcaaaatcagaatttaacacctatactaccgaagcaaacatcacccttacctta 28970416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 240
Target Start/End: Complemental strand, 15642504 - 15642437
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaa 240  Q
    ||||||||||||  || |||||||| | ||||||||||||| ||||| | ||||||||||||||||||    
T  15642504 aaacctgttaaactcacaatcagaaattaataactatactattgaagtaaacctcacccttaccttaa 15642437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 19702858 - 19702630
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaat 100  Q
    ||||||||||| ||||||||| |  |||||||||||||| |||||||| || | ||| |||||  |   | |||||||||||||||||||||||| |||     
T  19702858 tcccaaaaatcccattttcctccaattcactccccaaattagtttacagatatgaaattaagtgtttaatgcaaccagaacctaattctaacatcagaac 19702759  T
Q  101 agcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaatt 199  Q
      |||| ||||         | ||||||| ||  ||||||| ||||||||  ||||||||||||| ||| || ||||||||||||  |||||||||||||    
T  19702758 cacaatctcta---------ctctcaaaacccactaattcaacataaacct-aaaattcccaatttctacca-aaacctgttaaactcaaaatcagaatt 19702670  T
Q  200 caataactatactactgaagcagacctcacccttacctta 239  Q
    ||  | ||| || | ||||| | |||||||||||||||||    
T  19702669 cagaatctacacaattgaagtaaacctcacccttacctta 19702630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 239
Target Start/End: Original strand, 34978 - 35044
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||||  ||||||||||| ||| |||||| |||| ||||| | |||||||||||||||||    
T  34978 aaacctgttaaactcaaaatcagaaatcagtaactacactattgaagtaaacctcacccttacctta 35044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 239
Target Start/End: Original strand, 4078347 - 4078413
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||||| |||||| |||||| |||||||| |||  ||||| | |||||||||||||||||    
T  4078347 aaacctgttaaatacaaaattagaatttaataactacactcttgaagtaaacctcacccttacctta 4078413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 11359610 - 11359564
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||| ||||||||||||  ||||||||||||||||||||||    
T  11359610 cccaaaaatcccattttccttccaatcactccccaaatcagtttaca 11359564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 239
Target Start/End: Original strand, 24944251 - 24944368
Alignment:
Q  121 cactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagc 220  Q
    ||||||||| || ||||| |||||||||||  |||||| ||||||||| || ||||||||||||  |||||||| ||| ||  | ||| || | |||||     
T  24944251 cactcaaaacccaataatccaccataaacct-aaaatttccaattctaacaaaaacctgttaaaatcaaaatcaaaatacagaatctacacaattgaagt 24944349  T
Q  221 agacctcacccttacctta 239  Q
    | |||||||||||||||||    
T  24944350 aaacctcacccttacctta 24944368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 239
Target Start/End: Complemental strand, 27366611 - 27366549
Alignment:
Q  178 tgttaaatc-caaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||| |||| |||||||| |||||||||| |||||||||| | |||||||||||||||    
T  27366611 tgttaaatcacaaattcagaatttaataactatattactgaagcaaatctcacccttacctta 27366549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 27730252 - 27730346
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    |||||||||| ||||||| |||||  |||||||||||||||||||||| ||  | || |||||  | | | ||||||||| ||||||||||||||    
T  27730252 tcccaaaaatgtcatttttcttccaatcactccccaaatcagtttacagatacataattaagtgttctatgcaaccagaaactaattctaacatc 27730346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 44090295 - 44090222
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||||||| ||||||||| ||| |||||||| | |  ||||| | ||||||||||||||| ||||||||    
T  44090295 aaacctgttaaatacaaaatcaggatttaataactacattcttgaagtaaacctcacccttacctcaattcaga 44090222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 19648921 - 19648874
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||||||||||||| |  |||||||||||||| ||||||||    
T  19648921 tcccaaaaatctcattttcctccaattcactccccaaattagtttaca 19648874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 95
Target Start/End: Original strand, 20724840 - 20724907
Alignment:
Q  28 cactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    ||||||||||||||||||||| || | ||||||| |  ||| | ||||||||||||| ||||||||||    
T  20724840 cactccccaaatcagtttacaaatatgaaactaaatgatgtatgcaaccagaacctatttctaacatc 20724907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 32910695 - 32910624
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattca 244  Q
    ||||||||||||  | || ||||||||  ||| |||||||||||||| | | ||||||||||||||||||||    
T  32910695 aaacctgttaaactccaattcagaatttcatatctatactactgaagtaaaactcacccttaccttaattca 32910624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 45029330 - 45029401
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattca 244  Q
    ||||||| ||||| ||||||||||  | |||  |||||||||||||||| | ||||||||||||| ||||||    
T  45029330 aaacctgataaattcaaaatcagagattaatgtctatactactgaagcaaatctcacccttacctgaattca 45029401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 1062467 - 1062513
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||| |||||| |||||  ||||||||||||||||||||||    
T  1062467 cccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 1062513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 1067861 - 1067907
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||| |||||| |||||  ||||||||||||||||||||||    
T  1067861 cccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 1067907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 2385125 - 2385063
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||  |||||||||||||||||||||| | |  ||||| | |||||||||||||||||    
T  2385125 ctgttaaacacaaaatcagaattcaataactacattcttgaagtaaacctcacccttacctta 2385063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 2385290 - 2385244
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||| |||||| |||||  ||||||||||||||||||||||    
T  2385290 cccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 2385244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 4070907 - 4070861
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||| |||||| |||||  ||||||||||||||||||||||    
T  4070907 cccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 4070861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 11466951 - 11467013
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||| |||| |||||| |||| | |||||||||||||| | | |||||||||||||||    
T  11466951 ctgttaaattcaaattcagaaatcaaaatctatactactgaagtaaatctcacccttacctta 11467013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 14564760 - 14564822
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||  ||||||||||| | |||  |||||||||||||| | |||||||||||||||||    
T  14564760 ctgttaaactcaaaatcagaaattaatgtctatactactgaagtaaacctcacccttacctta 14564822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 21605511 - 21605557
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||| |||||| |||||  ||||||||||||||||||||||    
T  21605511 cccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 21605557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 24426044 - 24425982
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||  |||||||||||||||||||||| | |  ||||| | |||||||||||||||||    
T  24426044 ctgttaaacacaaaatcagaattcaataactacattcttgaagtaaacctcacccttacctta 24425982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 17582687 - 17582618
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||  |||| |||||| | || | |||||||| ||||| | ||||||||||||||||||||||||    
T  17582687 ctgttaaactcaaactcagaaattaaaatctatactattgaagtaaacctcacccttaccttaattcaga 17582618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 239
Target Start/End: Original strand, 27038118 - 27038235
Alignment:
Q  122 actcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagca 221  Q
    |||| |||| ||| |||||| |||||| || ||||| ||||||| |  |  ||||||||||||  ||||||||||||  || | ||| |||| ||||| |    
T  27038118 actccaaaatccacaattcaacataaaacccaaaatccccaattttcaccaaaacctgttaaactcaaaatcagaatctaaaatctacactattgaagta 27038217  T
Q  222 gacctcacccttacctta 239  Q
     |||||||||||||||||    
T  27038218 aacctcacccttacctta 27038235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 2106376 - 2106420
Alignment:
Q  4 caaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||||||||||  |  |||||||||||||||||||||||    
T  2106376 caaaaatctcattttcccccaattcactccccaaatcagtttaca 2106420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 242
Target Start/End: Original strand, 2106520 - 2106604
Alignment:
Q  158 tcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaatt 242  Q
    ||||||||||  |||||||||||||||  |||||| ||||||||  | |||||| | ||  | | ||||||||||||||||||||    
T  2106520 tcccaattctcacataaacctgttaaaaacaaaattagaattcagaacctatacaattgcggtaaacctcacccttaccttaatt 2106604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 135; Significance: 2e-70; HSPs: 98)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 15097339 - 15097093
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaat 100  Q
    ||||||||||| |||||||||    |||||||||||||| |||||||| || |||||||||||  ||| | ||||||||||||| |||| |||||  ||     
T  15097339 tcccaaaaatcccattttcctaaaattcactccccaaattagtttacagatataaaactaagtgttgtatgcaaccagaacctatttctcacatcaaaac 15097240  T
Q  101 agcaatttctatactcaattcactcaaaaacccat-aattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaatt 199  Q
    | |||| |||| |||||||||||||||| |||||| ||| || ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  15097239 accaatctctacactcaattcactcaaagacccattaatccaacataaaccccaaaattcccaattctatcataaacctgttaaacccaaaatcagaatt 15097140  T
Q  200 caataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  15097139 caataactatactactgaagcaaacctcacccttaccttaattcaga 15097093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 15103715 - 15103469
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaat 100  Q
    ||||||||||| |||||||||    |||||||||||||| |||||||| || |||||||||||  ||| | ||||||||||||| |||| |||||  ||     
T  15103715 tcccaaaaatcccattttcctcaaattcactccccaaattagtttacagatataaaactaagtgttgtatgcaaccagaacctatttctcacatcaaaac 15103616  T
Q  101 agcaatttctatactcaattcactcaaaaacccat-aattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaatt 199  Q
    | |||| |||| |||||||||||||||| |||||| ||| || ||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||    
T  15103615 aacaatctctacactcaattcactcaaagacccattaatccaacataaaccccaaaattcccaactctatcataaacctgttaaacccaaaatcagaatt 15103516  T
Q  200 caataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  15103515 caataactatactactgaagcaaacctcacccttaccttaattcaga 15103469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 46681567 - 46681329
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaat 100  Q
    ||||| |||||||||||||||    ||||||||||||||||||||||| || ||||| |||||  ||| | ||||||||||||| |||||||||| |||     
T  46681567 tcccagaaatctcattttcctcaaattcactccccaaatcagtttacagatataaaattaagtgttgtatgcaaccagaacctatttctaacatcagaac 46681468  T
Q  101 agcaatttctatactcaattcactcaaaaacccat-aattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaatt 199  Q
    | | || | || |||||||||||||||||| |||| ||| || ||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||    
T  46681467 aacgatctatacactcaattcactcaaaaaaccattaatccaacataaaccccaaaattcccaattttatcataaacctgttaaattcaaaatcagaatt 46681368  T
Q  200 caataactatactactgaagcagacctcacccttacctt 238  Q
    ||| |||||||||||||||||| ||||||||||||||||    
T  46681367 caaaaactatactactgaagcaaacctcacccttacctt 46681329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 26 - 246
Target Start/End: Original strand, 37380714 - 37380934
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    |||||||||||||| |||||||| | | || |||||||| | | | ||||||||||||||||||| |||| ||| | ||||||||| |||||||||||||    
T  37380714 ttcactccccaaattagtttacagaagcaagactaagtattatatgcaaccagaacctaattctaccatcagaacatcaatttctacactcaattcactc 37380813  T
Q  126 aaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacc 225  Q
    || ||  |||||| || ||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  | | |    
T  37380814 aagaaaacataatccaacataaaccccaaaatccctaattctatcataaacctgttaaatccaaaatcagaattcaataactatattactgaaataaatc 37380913  T
Q  226 tcacccttaccttaattcaga 246  Q
    |||||||||||||||||||||    
T  37380914 tcacccttaccttaattcaga 37380934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 26 - 246
Target Start/End: Complemental strand, 15436921 - 15436701
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    ||||||||||||||||||||||| |||||||||||| | |||| | ||||||||||||| ||||||||||  || || |||| ||| ||||||||||| |    
T  15436921 ttcactccccaaatcagtttacacatgtaaaactaaatgctgtatgcaaccagaacctatttctaacatcaaaacagtaattcctacactcaattcaccc 15436822  T
Q  126 aaaaacccataattcaccataaacccgaaaattcccaa-ttctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagac 224  Q
    ||||||| | |||||| | ||||||| |||||||| || ||||| ||||||||||||||| |||||||||||||| || | ||| |||||||||| | ||    
T  15436821 aaaaaccaagaattcaacttaaaccccaaaattccgaatttctaccataaacctgttaaa-ccaaaatcagaattaaacatctacactactgaagtaaac 15436723  T
Q  225 ctcacccttaccttaattcaga 246  Q
    ||||||||||||||||||||||    
T  15436722 ctcacccttaccttaattcaga 15436701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 26 - 246
Target Start/End: Original strand, 45186262 - 45186482
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    ||||||||||||||||||||||| || | ||||||| |  ||| | ||||||||||||| ||||||||||  || || |||| ||| ||||||||||| |    
T  45186262 ttcactccccaaatcagtttacagatatgaaactaaatgttgtatgcaaccagaacctatttctaacatcaaaacagtaattcctacactcaattcaccc 45186361  T
Q  126 aaaaacccataattcaccataaacccgaaaattcccaa-ttctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagac 224  Q
    ||||||| | |||||| | ||||||| ||||||||||| ||||| ||||||||||||||| |||||||||||||| || | |||||||||||||||| ||    
T  45186362 aaaaaccaagaattcaacttaaaccccaaaattcccaatttctaccataaacctgttaaa-ccaaaatcagaattaaacatctatactactgaagcaaac 45186460  T
Q  225 ctcacccttaccttaattcaga 246  Q
    ||||||||||||||||||||||    
T  45186461 ctcacccttaccttaattcaga 45186482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 76 - 246
Target Start/End: Complemental strand, 14168851 - 14168681
Alignment:
Q  76 cagaacctaattctaacatctgaatagcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaa-ttcccaattctatcataa 174  Q
    ||||||||| ||||||||||  || ||||||||||| |||||| |||| |||||||| | |||||| ||||||||| |||| ||||||||||||||||||    
T  14168851 cagaacctatttctaacatcaaaacagcaatttctacactcaaatcacccaaaaacctagaattcaacataaaccccaaaaattcccaattctatcataa 14168752  T
Q  175 acctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||||| |||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  14168751 acctgttaaattcaaa-tcagaattcaataactatattactgaagcaaacctcacccttaccttaattcaga 14168681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 76 - 246
Target Start/End: Complemental strand, 14173098 - 14172928
Alignment:
Q  76 cagaacctaattctaacatctgaatagcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaa-ttcccaattctatcataa 174  Q
    ||||||||| ||||||||||  || ||||||||||| |||||| |||| |||||||| | |||||| ||||||||| |||| ||||||||||||||||||    
T  14173098 cagaacctatttctaacatcaaaacagcaatttctacactcaaatcacccaaaaacctagaattcaacataaaccccaaaaattcccaattctatcataa 14172999  T
Q  175 acctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||||| |||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  14172998 acctgttaaattcaaa-tcagaattcaataactatattactgaagcaaacctcacccttaccttaattcaga 14172928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 26 - 246
Target Start/End: Complemental strand, 17467601 - 17467383
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    |||||||||||||| |||||| | | | || |||||||| | | | ||||||||||||||||||| |||| ||| | |||| |||| ||| |||||||||    
T  17467601 ttcactccccaaattagtttaaagaagcaagactaagtattatatgcaaccagaacctaattctaccatcagaacatcaatgtctacacttaattcactc 17467502  T
Q  126 aaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacc 225  Q
    || |||  ||||| || ||||||||| ||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| || | |    
T  17467501 aagaac--ataatccaacataaaccccaaaatccctaattctatcataaacctgttaaatccaaaatcagaatccaataactatattactgaaacaaatc 17467404  T
Q  226 tcacccttaccttaattcaga 246  Q
    |||||||||||||||||||||    
T  17467403 tcacccttaccttaattcaga 17467383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 26 - 246
Target Start/End: Original strand, 17585613 - 17585831
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    |||||||||||||| |||||| | | | || |||||||| | | | ||||||||||||||||||| |||| ||| | |||| |||| ||| |||||||||    
T  17585613 ttcactccccaaattagtttaaagaagcaagactaagtattatatgcaaccagaacctaattctaccatcagaacatcaatgtctacacttaattcactc 17585712  T
Q  126 aaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacc 225  Q
    || |||  ||||| || ||||||||| ||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| || | |    
T  17585713 aagaac--ataatccaacataaaccccaaaatccctaattctatcataaacctgttaaatccaaaatcagaatccaataactatattactgaaacaaatc 17585810  T
Q  226 tcacccttaccttaattcaga 246  Q
    |||||||||||||||||||||    
T  17585811 tcacccttaccttaattcaga 17585831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 76 - 246
Target Start/End: Complemental strand, 81398 - 81226
Alignment:
Q  76 cagaacctaattctaacatctgaatagcaatttctatactcaattcactcaaaaaccc--ataattcaccataaacccgaaaattcccaattctatcata 173  Q
    ||||||||| ||||||||||  || |||||| ||||  ||||||||||| ||||| ||  ||||| || ||||||||| |||||||| ||||||||||||    
T  81398 cagaacctatttctaacatcaaaacagcaatctctaccctcaattcactaaaaaaacccaataatccaacataaaccccaaaattcctaattctatcata 81299  T
Q  174 aacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||| ||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  81298 aacttgttaaatccaaactcagaattcaatatctatactactgaagcaaacctcacccttaccttaattcaga 81226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 26 - 246
Target Start/End: Original strand, 13318511 - 13318725
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    |||||||||||||| |||||||| ||||||||||||||  ||| | ||||||||||||| ||||||||||  || | |||| |||| |||||||||||||    
T  13318511 ttcactccccaaattagtttacaaatgtaaaactaagtgttgtatgcaaccagaacctatttctaacatcaaaacaacaatctctacactcaattcactc 13318610  T
Q  126 aaaaaccc-ataattcaccataaacccgaaaattcccaa-ttctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcaga 223  Q
    |||||||| ||||| || ||||||||| ||||| ||||| ||||| ||      |||||||| |||||||||||||||||| |||| ||||||||||| |    
T  13318611 aaaaacccaataatccaacataaaccc-aaaatccccaatttctacca------tgttaaat-caaaatcagaattcaatatctattctactgaagcaaa 13318702  T
Q  224 cctcacccttaccttaattcaga 246  Q
    | |||||||||||||||||||||    
T  13318703 cttcacccttaccttaattcaga 13318725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 26 - 246
Target Start/End: Original strand, 12555265 - 12555475
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    ||||||| |||||| |||||||| |||||||||||||| |||| | ||||||||||||| ||||||||||  || |||||| ||||         |||||    
T  12555265 ttcactctccaaattagtttacagatgtaaaactaagtgctgtatgcaaccagaacctatttctaacatcaaaacagcaatctcta---------cactc 12555355  T
Q  126 aaaaacccataattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagac 224  Q
    ||||  | |||||||| ||||||||| ||||| | ||||| ||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||| ||    
T  12555356 aaaactcaataattcatcataaaccc-aaaatcctcaatttctaccataaacctattaaa-ccaaaatcagaattcaataactatactactgaagcaaac 12555453  T
Q  225 ctcacccttaccttaattcaga 246  Q
    ||||| ||||||||||||||||    
T  12555454 ctcactcttaccttaattcaga 12555475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 26 - 246
Target Start/End: Complemental strand, 14580908 - 14580688
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    ||||||||||||||||||||||| || | |||  |  | |||| | ||  ||||||||| ||||||||||  |  ||  ||| ||| ||||||||||| |    
T  14580908 ttcactccccaaatcagtttacagatatgaaatgagatgctgtatgcactcagaacctatttctaacatcaaaccagtgattcctacactcaattcaccc 14580809  T
Q  126 aaaaacccat-aattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcaga 223  Q
    |||||||||  |||||| | ||||||| ||||||||||||| ||| ||||||| ||||||||| |||||||||||| || | |||||||||||||||| |    
T  14580808 aaaaacccaagaattcaacttaaaccc-aaaattcccaatttctaccataaacttgttaaatc-aaaatcagaattaaaaatctatactactgaagcaaa 14580711  T
Q  224 cctcacccttaccttaattcaga 246  Q
    |||||||||||||||||||||||    
T  14580710 cctcacccttaccttaattcaga 14580688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 30271193 - 30271099
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    |||| ||||||||||||| ||||  |||||||||||||| |||| ||| |||||||||||||| ||||||||||| |||||||||||||||||||    
T  30271193 tccccaaaatctcatttttcttcaattcactccccaaattagttaacagatgtaaaactaagtgctgtctacaactagaacctaattctaacatc 30271099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 10520584 - 10520820
Alignment:
Q  1 tcccaaaaatctcattttccttccg-ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaa 99  Q
    |||||||||||||||||| | ||   |||||||||||||| |||||||| ||| ||||||||||  ||| | |||||||||||||||||||||||| |||    
T  10520584 tcccaaaaatctcatttttcctcaaattcactccccaaattagtttacagatgcaaaactaagtgttgtatgcaaccagaacctaattctaacatcagaa 10520683  T
Q  100 tagcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaat 198  Q
     | |||| ||||         ||| |||||  | |||||||| ||  ||||  ||||| ||||||| ||| || || | ||||||| ||||||||||| |    
T  10520684 caacaatctcta---------cacccaaaactcaataattcatcaataacct-aaaatccccaatttctaccaaaagcttgttaaa-ccaaaatcagatt 10520772  T
Q  199 tcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    |||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  10520773 tcaataactacactattgaagcaaacctcacccttaccttaattcaga 10520820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 143 - 244
Target Start/End: Original strand, 32772357 - 32772457
Alignment:
Q  143 cataaacccgaaaattcccaattc-tatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaat 241  Q
    ||||||||| |||||||||||||| || || || | ||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  32772357 cataaaccc-aaaattcccaattcctaccaaaagcttgttaaa-ccaaaatcagaattcaataactatactactgaagcaaacctcgcccttaccttaat 32772454  T
Q  242 tca 244  Q
    |||    
T  32772455 tca 32772457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 26 - 93
Target Start/End: Original strand, 15839393 - 15839460
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaaca 93  Q
    ||||||||||||||||||||||| || | ||||||||| |||||||||||||||||||||||||||||    
T  15839393 ttcactccccaaatcagtttacagatatgaaactaagtgctgtctacaaccagaacctaattctaaca 15839460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 3328594 - 3328828
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaat 100  Q
    |||||||||||||||||||||    || |||||||||||||||||||| || |  |||||| | |||| ||||  ||||||||| ||||||||||  ||     
T  3328594 tcccaaaaatctcattttcctcaaatttactccccaaatcagtttacagatatgcaactaaatgctgtatacactcagaacctatttctaacatcaaaac 3328693  T
Q  101 agcaatttctatactcaattcactcaaaaaccca-taattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaat 198  Q
    |||||| ||||         ||||||||| |||| |||| || ||| ||||| | ||| ||||||| ||| |||  | |||||||| |||||||||||||    
T  3328694 agcaatctcta---------cactcaaaaccccaataatccatcattaaccc-ataatccccaatttctaccatggatctgttaaa-ccaaaatcagaat 3328782  T
Q  199 tcaataactatactactgaagcagacctcacccttaccttaattca 244  Q
    |||||| |||||||||||||| | | ||||||||||||||||||||    
T  3328783 tcaatatctatactactgaagtaaaactcacccttaccttaattca 3328828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 186 - 246
Target Start/End: Complemental strand, 11854611 - 11854551
Alignment:
Q  186 ccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  11854611 ccaaaatcagaattcaataactacactattgaagcaaacctcacccttaccttaattcaga 11854551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 239
Target Start/End: Original strand, 12429733 - 12429849
Alignment:
Q  121 cactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagc 220  Q
    ||||||||| || ||||||||||||||  || |||||||||||||||| ||||||||||||| |  ||||||||||||| |  | ||| |||| |||||     
T  12429733 cactcaaaacccaataattcaccataa--cctaaaattcccaattctaacataaacctgttataatcaaaatcagaatttagcatctacactattgaagt 12429830  T
Q  221 agacctcacccttacctta 239  Q
    | ||||||| |||||||||    
T  12429831 aaacctcactcttacctta 12429849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 246
Target Start/End: Complemental strand, 15085192 - 15085102
Alignment:
Q  156 attcccaattctatcataaa-cctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    |||| |||||||| |||||| |||||||||  ||||||||||||| || | |||||||||||||| | ||||||||||||||||||||||||    
T  15085192 attctcaattctaacataaaacctgttaaactcaaaatcagaatt-aacatctatactactgaagtaaacctcacccttaccttaattcaga 15085102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 246
Target Start/End: Complemental strand, 16475374 - 16475265
Alignment:
Q  136 aattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcaccctta 234  Q
    |||||| | ||||||| ||||| ||||||| ||| ||||||||||||||| |||||||||||||| || | ||| |||||||||| | |||||||||||     
T  16475374 aattcaacttaaaccc-aaaatccccaatttctaccataaacctgttaaa-ccaaaatcagaattaaaaatctacactactgaagtaaacctcacccttg 16475277  T
Q  235 ccttaattcaga 246  Q
    ||||||||||||    
T  16475276 ccttaattcaga 16475265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 11879830 - 11879924
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||| ||  | || |||||  | | | ||||||||||| ||||||||||||    
T  11879830 tcccaaaaatctcattttccttccaatcactccccaaatcagtttacagatacataattaagtgttctatgcaaccagaacccaattctaacatc 11879924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 246
Target Start/End: Original strand, 15143165 - 15143246
Alignment:
Q  164 ttctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||| |||||||| |||||| |||||||||||||| || | |||||||||||||| | ||||||||||||||||| ||||||    
T  15143165 ttctaccataaacccgttaaa-ccaaaatcagaattaaaaatctatactactgaagtaaacctcacccttaccttatttcaga 15143246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 244
Target Start/End: Complemental strand, 16951458 - 16951369
Alignment:
Q  155 aattcccaattct-atcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattca 244  Q
    ||||||||||||| | || ||||||||||||  |||| ||||||||||||| |||||||||||||| | | ||||||||||||||||||||    
T  16951458 aattcccaattctcaccaaaaacctgttaaactcaaa-tcagaattcaatacctatactactgaagtaaaactcacccttaccttaattca 16951369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 244
Target Start/End: Complemental strand, 18956123 - 18956015
Alignment:
Q  135 taattcaccataaacccgaaaattcccaattct-atcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcaccctt 233  Q
    |||||||||| |||||| | |||||| |||||| | || ||||||||||||  |||| ||||||||||||| |||||||||||||| | | |||||||||    
T  18956123 taattcaccacaaaccc-ataattcctaattctcaccaaaaacctgttaaactcaaa-tcagaattcaatatctatactactgaagtaaaactcaccctt 18956026  T
Q  234 accttaattca 244  Q
    |||||||||||    
T  18956025 accttaattca 18956015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 178 - 246
Target Start/End: Original strand, 4281111 - 4281180
Alignment:
Q  178 tgttaaatc-caaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||| |||| ||||||||||||||||||| |||||||||| | ||||||||||||||| ||||||    
T  4281111 tgttaaatcacaaattcagaattcaataactatattactgaagcaaatctcacccttaccttagttcaga 4281180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 6412754 - 6412858
Alignment:
Q  135 taattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcaccctt 233  Q
    ||||||| ||||||||  | ||||||||||| ||| || | ||||||||||  |||||||||||| ||||| |||||||| ||||||| |||||||||||    
T  6412754 taattcaacataaacctaagaattcccaatttctacca-acacctgttaaactcaaaatcagaatacaatatctatactaatgaagcaaacctcaccctt 6412852  T
Q  234 acctta 239  Q
    ||||||    
T  6412853 acctta 6412858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 30602107 - 30602034
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||||||| ||||||||||||| |||||||| | |  ||||| | ||||||||||||||||||||||||    
T  30602107 aaacctgttaaatacaaaatcagaatttaataactacattcttgaagtaaacctcacccttaccttaattcaga 30602034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 242
Target Start/End: Original strand, 42059483 - 42059548
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaatt 242  Q
    ||||||||  ||||||||||| |||||||||||| |||||||| | ||||||||||||||||||||    
T  42059483 ctgttaaacacaaaatcagaaatcaataactatattactgaagaaaacctcacccttaccttaatt 42059548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 173 - 240
Target Start/End: Complemental strand, 13453046 - 13452979
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaa 240  Q
    ||||||||||||  ||||||||||| |||||||||| |||| ||||| | ||||||||||||||||||    
T  13453046 aaacctgttaaactcaaaatcagaaatcaataactacactattgaagtaaacctcacccttaccttaa 13452979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 21758219 - 21758286
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaa 240  Q
    ||||||||||||  ||||||||||| |||||||||| |||| ||||| | ||||||||||||||||||    
T  21758219 aaacctgttaaactcaaaatcagaaatcaataactacactattgaagtaaacctcacccttaccttaa 21758286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 239
Target Start/End: Original strand, 13020632 - 13020698
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||||  ||||||||||| | |||||||| |||| ||||||| |||||||||||||||||    
T  13020632 aaacctgttaaactcaaaatcagaaattaataactacactattgaagcaaacctcacccttacctta 13020698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 239
Target Start/End: Original strand, 13026839 - 13026905
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||||  ||||||||||| | |||||||| |||| ||||||| |||||||||||||||||    
T  13026839 aaacctgttaaactcaaaatcagaaattaataactacactattgaagcaaacctcacccttacctta 13026905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 242
Target Start/End: Complemental strand, 16184718 - 16184597
Alignment:
Q  121 cactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatc-caaaatcagaattcaataactatactactgaag 219  Q
    |||||||||  | ||||||||||||||| |  |||||||||||||||| || ||||||||||||   ||||||||||||| | || | | |||| |||||    
T  16184718 cactcaaaatacaataattcaccataaatct-aaaattcccaattctaacaaaaacctgttaaaaatcaaaatcagaattaagtatccacactattgaag 16184620  T
Q  220 cagacctcacccttaccttaatt 242  Q
     | ||||||||||||||||||||    
T  16184619 taaacctcacccttaccttaatt 16184597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 11298944 - 11298871
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||| ||||| ||||||||||  | |||  |||||||||||||||| ||||||||||||||||| ||||||    
T  11298944 aaacctgataaattcaaaatcagagattaatgtctatactactgaagcaaacctcacccttaccttagttcaga 11298871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 11307308 - 11307235
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||| ||||| ||||||||||  | |||  |||||||||||||||| ||||||||||||||||| ||||||    
T  11307308 aaacctgataaattcaaaatcagagattaatgtctatactactgaagcaaacctcacccttaccttagttcaga 11307235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 11340666 - 11340739
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||||||  |||||||||| || |||| ||| | |||||||| | ||||||||||||||||||||||||    
T  11340666 aaacctgttaaactcaaaatcagactttaatagctacaatactgaagtaaacctcacccttaccttaattcaga 11340739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 49159693 - 49159762
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||| ||||||||||| |||||||||| |||| ||||  | ||||||| ||||||||||||||||    
T  49159693 ctgttaaattcaaaatcagaaatcaataactacactattgaactaaacctcactcttaccttaattcaga 49159762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 37243670 - 37243578
Alignment:
Q  3 ccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    ||||||||||||||||||| |  ||||||||||||||  ||||||| ||| | ||||| ||| | | | ||||||||||||| ||||||||||    
T  37243670 ccaaaaatctcattttcctccaattcactccccaaattggtttacagatgcagaactatgtaatatatgcaaccagaacctatttctaacatc 37243578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 750607 - 750654
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  750607 tcccaaaaatcccattttccttccaatcactccccaaatcagtttaca 750654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 12454986 - 12455053
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaa 240  Q
    ||||||||||||  ||||||||||| | || | |||||||||||||| | ||||||||||||||||||    
T  12454986 aaacctgttaaactcaaaatcagaaattaagatctatactactgaagtaaacctcacccttaccttaa 12455053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 26089358 - 26089311
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  26089358 tcccaaaaatcccattttccttccaatcactccccaaatcagtttaca 26089311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 26119780 - 26119733
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  26119780 tcccaaaaatcccattttccttccaatcactccccaaatcagtttaca 26119733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 40684169 - 40684122
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  40684169 tcccaaaaatcccattttccttccaatcactccccaaatcagtttaca 40684122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 48987328 - 48987281
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  48987328 tcccaaaaatcccattttccttccaatcactccccaaatcagtttaca 48987281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 49159527 - 49159574
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| |||||| ||||| |||||||||||||||||||||||    
T  49159527 tcccaaaaatcccatttttcttccattcactccccaaatcagtttaca 49159574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 125 - 242
Target Start/End: Complemental strand, 2425 - 2309
Alignment:
Q  125 caaaaacccataattcaccataaacccgaaaattcccaattct-atcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcaga 223  Q
    ||||||||  ||||||| || |||||| | ||||||||||||| | || ||||||||||||  |||| ||||||| ||| | |||||||||||||| | |    
T  2425 caaaaaccattaattcatcacaaaccc-ataattcccaattctcaccaaaaacctgttaaactcaaa-tcagaatccaacatctatactactgaagtaaa 2328  T
Q  224 cctcacccttaccttaatt 242  Q
     ||||||||||||||||||    
T  2327 actcacccttaccttaatt 2309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 239
Target Start/End: Original strand, 2439809 - 2439875
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||||| ||||||||||||| |||||||| | |  ||||| | |||||||||||||||||    
T  2439809 aaacctgttaaatacaaaatcagaatttaataactacattcttgaagtaaacctcacccttacctta 2439875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 100
Target Start/End: Complemental strand, 11219477 - 11219403
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaat 100  Q
    ||||||||||||||||||||||| ||  || ||||||| |||  | ||||||||||||| |||||||||| ||||    
T  11219477 ttcactccccaaatcagtttacagatacaatactaagtgctgaatgcaaccagaacctatttctaacatcagaat 11219403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 239
Target Start/End: Original strand, 11879992 - 11880058
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||||| ||||||||||||| |||||||| | |  ||||| | |||||||||||||||||    
T  11879992 aaacctgttaaatacaaaatcagaatttaataactacattcttgaagtaaacctcacccttacctta 11880058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 12399082 - 12399020
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||  ||||||||||| |||||||||| | |||||||| | |||||||||||||||||    
T  12399082 ctgttaaacacaaaatcagaaatcaataactacattactgaagtaaacctcacccttacctta 12399020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 239
Target Start/End: Complemental strand, 13963249 - 13963183
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||||  ||||||||||| ||| |||||| |||| ||||| | |||||||||||||||||    
T  13963249 aaacctgttaaactcaaaatcagaaatcagtaactacactattgaagtaaacctcacccttacctta 13963183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 13963411 - 13963317
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    ||||||||||| |||||| |||||  |||||||||||||||||||||| ||  | || |||||  | | | ||||||||| ||||||||||||||    
T  13963411 tcccaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacataattaagtgttctatgcaaccagaaactaattctaacatc 13963317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 16843112 - 16843050
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||  ||||||||||| | || | |||||||||||||||| |||||||||||||||||    
T  16843112 ctgttaaactcaaaatcagaaattaacatctatactactgaagcaaacctcacccttacctta 16843050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 26288978 - 26288917
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||  ||||||||||||| || | |||||||||||||||| |||||||||||||||||    
T  26288978 ctgttaaactcaaaatcagaatt-aacatctatactactgaagcaaacctcacccttacctta 26288917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 125 - 239
Target Start/End: Complemental strand, 46348012 - 46347899
Alignment:
Q  125 caaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagac 224  Q
    ||||| || ||||||| |||||||||  |||||||| ||||||| || ||||||||||||  |||||||| |||| |  | ||| |||| ||||| | ||    
T  46348012 caaaatccaataattccccataaacct-aaaattccaaattctaacacaaacctgttaaaatcaaaatcaaaattaatcatctacactattgaagtaaac 46347914  T
Q  225 ctcacccttacctta 239  Q
    |||||||||||||||    
T  46347913 ctcacccttacctta 46347899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 239
Target Start/End: Original strand, 46650629 - 46650695
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||| ||||| ||||||||||  | |||  |||||||||||||||| |||||||||||||||||    
T  46650629 aaacctgataaattcaaaatcagagattaatgtctatactactgaagcaaacctcacccttacctta 46650695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 11340505 - 11340598
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    |||||||||| |||||| |||||  ||||||||||||| |||||||| || || || |||||  | | | ||||||||| ||||||||||||||    
T  11340505 cccaaaaatcccatttttcttccaatcactccccaaattagtttacagatatataattaagtgttctatgcaaccagaaactaattctaacatc 11340598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 14945162 - 14945109
Alignment:
Q  186 ccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    |||||||||||| |||||| |||||||||||||| | | |||||||||||||||    
T  14945162 ccaaaatcagaaatcaatatctatactactgaagtaaaactcacccttacctta 14945109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 15372755 - 15372702
Alignment:
Q  186 ccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    |||||||||||| |||||| |||||||||||||| | | |||||||||||||||    
T  15372755 ccaaaatcagaaatcaatatctatactactgaagtaaaactcacccttacctta 15372702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 18436437 - 18436364
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    |||||||| |||  |||||||||| || |||| ||| | |||||||| | ||||||||||||||||||||||||    
T  18436437 aaacctgtcaaactcaaaatcagactttaatagctacaatactgaagtaaacctcacccttaccttaattcaga 18436364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 238
Target Start/End: Original strand, 23521906 - 23521971
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctt 238  Q
    ||||||||||||  ||||||||||| | |||||||| |||| ||||| | ||||||||||||||||    
T  23521906 aaacctgttaaactcaaaatcagaaattaataactacactattgaagtaaacctcacccttacctt 23521971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 26089197 - 26089124
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    |||||||||||| ||||||||||| || || | ||| |||| ||||| | ||||||||||||||||| ||||||    
T  26089197 aaacctgttaaaaccaaaatcagactttaaaatctacactattgaagtaaacctcacccttaccttagttcaga 26089124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 26113002 - 26112929
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    |||||||||||| ||||||||||| || || | ||| |||| ||||| | ||||||||||||||||| ||||||    
T  26113002 aaacctgttaaaaccaaaatcagactttaaaatctacactaatgaagtaaacctcacccttaccttagttcaga 26112929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 26119619 - 26119546
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    |||||||||||| ||||||||||| || || | ||| |||| ||||| | ||||||||||||||||| ||||||    
T  26119619 aaacctgttaaaaccaaaatcagactttaaaatctacactaatgaagtaaacctcacccttaccttagttcaga 26119546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 246
Target Start/End: Complemental strand, 16069669 - 16069629
Alignment:
Q  206 ctatactactgaagcagacctcacccttaccttaattcaga 246  Q
    |||||||||||||||| |||||||||||||||||| |||||    
T  16069669 ctatactactgaagcaaacctcacccttaccttaaatcaga 16069629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 12462442 - 12462509
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaa 240  Q
    |||| |||||||  ||||||||||| | || | |||||||||||||| | ||||||||||||||||||    
T  12462442 aaacttgttaaactcaaaatcagaaattaagatctatactactgaagtaaacctcacccttaccttaa 12462509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 14281029 - 14280982
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| ||||||||| |  |||||||||||||||||||||||    
T  14281029 tcccaaaaatcccattttcctccaattcactccccaaatcagtttaca 14280982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 15632124 - 15632171
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| |||||| |||||  ||||||||||||||||||||||    
T  15632124 tcccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 15632171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 15722586 - 15722539
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| ||||||||| |  |||||||||||||||||||||||    
T  15722586 tcccaaaaatcccattttcctccaattcactccccaaatcagtttaca 15722539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 93
Target Start/End: Complemental strand, 16951595 - 16951508
Alignment:
Q  6 aaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaaca 93  Q
    |||||||||||||||| |  ||||||||||||||  ||||||| ||  | ||||||||||  | | ||||||||| ||||||||||||    
T  16951595 aaaatctcattttcctccaattcactccccaaattggtttacaaatacagaactaagtaccatatgcaaccagaaactaattctaaca 16951508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 17182086 - 17182039
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||||||||||||| |  |||||||||||||| ||||||||    
T  17182086 tcccaaaaatctcattttcctccaattcactccccaaattagtttaca 17182039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 20019081 - 20019034
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| |||||| |||||  ||||||||||||||||||||||    
T  20019081 tcccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 20019034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 21758057 - 21758104
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| |||||| |||||  ||||||||||||||||||||||    
T  21758057 tcccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 21758104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 26113163 - 26113116
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| |||||||||| |  ||||||||||||||||||||||    
T  26113163 tcccaaaaatcccattttcctttcaatcactccccaaatcagtttaca 26113116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 240
Target Start/End: Complemental strand, 30271027 - 30270964
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaa 240  Q
    ||||||||  ||||||||||| | || | |||||||||||||||| || |||||||||||||||    
T  30271027 ctgttaaactcaaaatcagaaattaacatctatactactgaagcaaacttcacccttaccttaa 30270964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 37288231 - 37288278
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| |||||| |||||  ||||||||||||||||||||||    
T  37288231 tcccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 37288278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 643313 - 643359
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||| |||||| |||||  ||||||||||||||||||||||    
T  643313 cccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 643359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 1318531 - 1318577
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||| |||||| |||||  ||||||||||||||||||||||    
T  1318531 cccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 1318577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 2439648 - 2439694
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||| |||||| |||||  ||||||||||||||||||||||    
T  2439648 cccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 2439694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 239
Target Start/End: Original strand, 15632285 - 15632351
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||||  ||||||||||| ||| |||||| |||| ||||| | |||||| ||||||||||    
T  15632285 aaacctgttaaactcaaaatcagaaatcagtaactacactattgaagtaaacctcaaccttacctta 15632351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 18436597 - 18436504
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    ||||||||||| |||||| |||||  ||||||||||||| |||||||| || || || |||||  | | | ||||||||| ||||||||||||||    
T  18436597 tcccaaaaatc-catttttcttccaatcactccccaaattagtttacagatatataattaagtgttctatgcaaccagaaactaattctaacatc 18436504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 20018915 - 20018853
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||| |||| ||||||  ||||||||| |||| ||||| | |||||||||||||||||    
T  20018915 ctgttaaattcaaattcagaaaccaataactacactattgaagtaaacctcacccttacctta 20018853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 30602268 - 30602222
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||| |||||| |||||  ||||||||||||||||||||||    
T  30602268 cccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 30602222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 46175250 - 46175312
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||  ||||||||||| | || | |||||||||||||| | |||||||||||||||||    
T  46175250 ctgttaaactcaaaatcagaaattaaaatctatactactgaagtaaacctcacccttacctta 46175312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 49151356 - 49151406
Alignment:
Q  6 aaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaa 56  Q
    |||||| |||||| |||||  |||||||||||||||||||||| |||||||    
T  49151356 aaaatcccatttttcttccaatcactccccaaatcagtttacagatgtaaa 49151406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 49158046 - 49158096
Alignment:
Q  6 aaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaa 56  Q
    |||||| |||||| |||||  |||||||||||||||||||||| |||||||    
T  49158046 aaaatcccatttttcttccaatcactccccaaatcagtttacagatgtaaa 49158096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 643479 - 643548
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||  ||||||||||||| |||||||| | |  ||||| | ||||||||||||||||| ||||||    
T  643479 ctgttaaacacaaaatcagaatttaataactacattcttgaagtaaacctcacccttaccttagttcaga 643548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 12399245 - 12399200
Alignment:
Q  3 ccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||| |||||| |||||  ||||||||||||||||||||||    
T  12399245 ccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 12399200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 95
Target Start/End: Original strand, 15143026 - 15143095
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    ||||||||||||||||||||||| ||||| |||||| |  ||| | ||| ||||||||| ||||| ||||    
T  15143026 ttcactccccaaatcagtttacaaatgtataactaaatgttgtattcaatcagaacctatttctatcatc 15143095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 242
Target Start/End: Original strand, 33405577 - 33405646
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaatt 242  Q
    ||||||||||||  |||||||||| || || | ||| |||| ||||| | ||||||||||||||||||||    
T  33405577 aaacctgttaaactcaaaatcagactttaaaatctacactattgaagtaaacctcacccttaccttaatt 33405646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 246
Target Start/End: Complemental strand, 5186456 - 5186416
Alignment:
Q  206 ctatactactgaagcagacctcacccttaccttaattcaga 246  Q
    |||||||| ||||| | ||||||||||||||||||||||||    
T  5186456 ctatactattgaagtaaacctcacccttaccttaattcaga 5186416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 15085336 - 15085284
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgt 53  Q
    ||||||||||| |||||||||||  ||||||||||||||  ||||||| ||||    
T  15085336 tcccaaaaatcccattttccttcaattcactccccaaattggtttacagatgt 15085284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 239
Target Start/End: Original strand, 15839511 - 15839594
Alignment:
Q  155 aattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||||| ||  |||| |||||||  ||||||||||| | ||| |||| |||| ||||| | |||||||||||||||||    
T  15839511 aattcccaattctctccaaaacttgttaaactcaaaatcagaaattaat-actacactattgaagtaaacctcacccttacctta 15839594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #97
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 238
Target Start/End: Complemental strand, 37243529 - 37243446
Alignment:
Q  155 aattcccaattct-atcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctt 238  Q
    ||||||||||||| | || ||||||||||||  |||| ||||||| ||||| ||||||||||||||   | ||||||||||||||    
T  37243529 aattcccaattctcaccaaaaacctgttaaactcaaa-tcagaatccaatatctatactactgaagtgaaactcacccttacctt 37243446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #98
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 42059320 - 42059364
Alignment:
Q  4 caaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||| |||||| |||||  ||||||||||||||||||||||    
T  42059320 caaaaatcccatttttcttccaatcactccccaaatcagtttaca 42059364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 133; Significance: 3e-69; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 26 - 246
Target Start/End: Original strand, 20849851 - 20850071
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    |||||||||||||| |||||||| ||| || |||||||  ||| | ||| |||||||||||||||||||| ||| | |||| |||| |||||||||||||    
T  20849851 ttcactccccaaattagtttacagatgcaagactaagtgttgtatgcaagcagaacctaattctaacatcagaacaacaatctctacactcaattcactc 20849950  T
Q  126 aaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacc 225  Q
    |||||||||||||  | |||||| || |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  20849951 aaaaacccataatctaacataaatcccaaaatttccaattctatcataaacctgtttaatccaaaatcagaattcaataactatactactgaagcaaacc 20850050  T
Q  226 tcacccttaccttaattcaga 246  Q
    |||||||||||||||||||||    
T  20850051 tcacccttaccttaattcaga 20850071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 26 - 246
Target Start/End: Complemental strand, 21410028 - 21409808
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    ||||||||||||||||||||||| || | |||  || |  ||| | ||||||||||||||||||||||||  || | |||| |||| |||||||||||||    
T  21410028 ttcactccccaaatcagtttacagatatgaaatgaaatgttgtatgcaaccagaacctaattctaacatcaaaacaacaatctctacactcaattcactc 21409929  T
Q  126 aaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacc 225  Q
    |||| |  ||||| || ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  21409928 aaaacctgataatccaacataaaccccaaaattcctaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcaaacc 21409829  T
Q  226 tcacccttaccttaattcaga 246  Q
    |||||||||||||||||||||    
T  21409828 tcacccttaccttaattcaga 21409808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 26 - 246
Target Start/End: Original strand, 21698921 - 21699142
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    ||||||||||||||||||||| | |||||||||||| | |||| | ||||||||||||| |||||||||   || || ||| | || || |||||||| |    
T  21698921 ttcactccccaaatcagtttaaagatgtaaaactaaatgctgtatgcaaccagaacctatttctaacattaaaacagtaatctttacacccaattcaccc 21699020  T
Q  126 aaaaacccat-aattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcaga 223  Q
    |||||  ||  |||||| | ||||||| ||||||||||||| ||| ||||||||||||||| |||||||||||||| || | |||||||||||||||| |    
T  21699021 aaaaaaacaagaattcaacttaaaccccaaaattcccaatttctaccataaacctgttaaa-ccaaaatcagaattaaacatctatactactgaagcaaa 21699119  T
Q  224 cctcacccttaccttaattcaga 246  Q
    |||||||||||||||||||||||    
T  21699120 cctcacccttaccttaattcaga 21699142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 26 - 246
Target Start/End: Complemental strand, 31926666 - 31926445
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    ||||| ||||||||||||||||| || | |||  || | |||| | ||  ||||||||| ||||||||||  || || |||||||| |||||||||||||    
T  31926666 ttcaccccccaaatcagtttacagatatgaaatgaaatcctgtatgcactcagaacctatttctaacatcaaaacagtaatttctacactcaattcactc 31926567  T
Q  126 aaaaaccca-taattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcaga 223  Q
    ||||||||| || |||| ||||||||| ||||| ||||||| ||| ||||||||||||||||| |||||||||||| || | ||| |||||||||||| |    
T  31926566 aaaaacccaatagttcaacataaaccccaaaatccccaatttctaccataaacctgttaaatc-aaaatcagaattaaacatctacactactgaagcaaa 31926468  T
Q  224 cctcacccttaccttaattcaga 246  Q
    |||||||||||||||||||||||    
T  31926467 cctcacccttaccttaattcaga 31926445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 23712994 - 23713237
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaat 100  Q
    |||||||||||||||||||||    |||||||||||||| |||||||| |||||||||||| | |||| | ||| || ||| || ||||||||||  |      
T  23712994 tcccaaaaatctcattttcctcaatttcactccccaaattagtttacagatgtaaaactaaatgctgtatgcaatcaaaacttatttctaacatcaaacc 23713093  T
Q  101 agcaatttctatactcaattcactcaaaaacccata-attcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaat 198  Q
    ||  ||| ||| ||||||||||  |||||||| |   ||||| ||||||||| ||||| ||||||| ||| ||||||||||||||| ||||||||| |||    
T  23713094 agtgattcctacactcaattcatccaaaaaccaaaggattcaacataaaccc-aaaatccccaatttctaccataaacctgttaaa-ccaaaatcataat 23713191  T
Q  199 tcaataactatactactgaagcagacctcacccttaccttaattca 244  Q
    | || | |||||||||||||||| ||||||||||||||||||||||    
T  23713192 taaaaatctatactactgaagcaaacctcacccttaccttaattca 23713237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 36615691 - 36615924
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaat 100  Q
    ||||||||||| |||||| ||||  |||||||||||||| | |||||| ||| |||||||||| ||||||||||||||||||||||||||||||  ||||    
T  36615691 tcccaaaaatcccatttttcttcaattcactccccaaattaatttacagatgcaaaactaagtgctgtctacaaccagaacctaattctaacattagaat 36615790  T
Q  101 agcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattc 200  Q
    | ||||||| | ||||  |  |||||| |      | |||| |||||  || |||||||||||||||| |||||  ||||||||| ||||||||||| |     
T  36615791 atcaatttc-acactc--taaactcaaca------atttcatcataa--cccaaaattcccaattctaccataactctgttaaat-caaaatcagaactt 36615878  T
Q  201 aataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    |  | |||||||||||||||| ||||||||||||||||||||||||    
T  36615879 agaatctatactactgaagcaaacctcacccttaccttaattcaga 36615924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 20823683 - 20823552
Alignment:
Q  108 tctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataact 207  Q
    |||| |||||||||| |||||||| ||||||||| | ||||||| |||| |||||||||   |||||||||||||||  |||| |||||||||| |||||    
T  20823683 tctacactcaattcattcaaaaactcataattcaacctaaaccctaaaaatcccaattcacacataaacctgttaaaatcaaattcagaattcagtaact 20823584  T
Q  208 atactactgaagcagacctcacccttacctta 239  Q
    |||||| ||||||| |||||||||||||||||    
T  20823583 atactaatgaagcaaacctcacccttacctta 20823552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 76 - 246
Target Start/End: Original strand, 19336640 - 19336810
Alignment:
Q  76 cagaacctaattctaacatctgaatagcaatttctatactcaattcactcaaaaacccat-aattcaccataaacccgaaaattcccaatt-ctatcata 173  Q
    ||||||||| ||||||||||  |  ||  ||| ||| ||||||||||| ||||||||||  |||||| ||||||||| ||||| ||||||| ||| ||||    
T  19336640 cagaacctatttctaacatcaaaccagtgattcctacactcaattcacccaaaaacccaagaattcaacataaaccc-aaaatccccaatttctaccata 19336738  T
Q  174 aacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||||| |||||||||||||| ||   |||||||||||||||| ||||||||||||||||||||||||    
T  19336739 aacctgttaaa-ccaaaatcagaattaaacctctatactactgaagcaaacctcacccttaccttaattcaga 19336810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 246
Target Start/End: Original strand, 43089144 - 43089375
Alignment:
Q  3 ccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatag 102  Q
    |||||||||||||||| ||||  |||||| ||||||| |||||||| ||| |||||||||| ||||||||||||| ||  ||||||||||||| ||| |     
T  43089144 ccaaaaatctcatttttcttcaattcactgcccaaattagtttacagatgcaaaactaagtgctgtctacaaccataatttaattctaacatcagaacat 43089243  T
Q  103 caatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaa 202  Q
    ||||||| | ||||  |  |||||| |      | |||| |||||  || |||||||||||||||| |||||  ||||||||| ||||||||||| | |     
T  43089244 caatttc-acactc--taaactcaaca------atttcatcataa--cccaaaattcccaattctaccataactctgttaaat-caaaatcagaacttag 43089331  T
Q  203 taactatactactgaagcagacctcacccttaccttaattcaga 246  Q
     | |||||||||||||||| ||||||||||||||||||||||||    
T  43089332 aatctatactactgaagcaaacctcacccttaccttaattcaga 43089375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 20837494 - 20837363
Alignment:
Q  108 tctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataact 207  Q
    |||| |||||||||| |||||||| ||||||||| | ||||||| |||| |||||||||   ||||||||| |||||  |||| |||||||||| || ||    
T  20837494 tctacactcaattcattcaaaaactcataattcaacctaaaccccaaaaatcccaattcacacataaaccttttaaaatcaaattcagaattcagtatct 20837395  T
Q  208 atactactgaagcagacctcacccttacctta 239  Q
    |||||| ||||||| |||||||||||||||||    
T  20837394 atactaatgaagcaaacctcacccttacctta 20837363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 20941127 - 20940997
Alignment:
Q  108 tctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataact 207  Q
    |||| |||||||||||||||||||||||||| || ||||||||| ||| |||||||||||  |||||||||||||||  |||||||||||||||| |||     
T  20941127 tctacactcaattcactcaaaaacccataatccaacataaaccccaaa-ttcccaattctcacataaacctgttaaaatcaaaatcagaattcaagaacc 20941029  T
Q  208 atactactgaagcagacctcacccttacctta 239  Q
    ||| ||||||   | | |||||||||||||||    
T  20941028 atattactgacataaatctcacccttacctta 20940997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 79 - 239
Target Start/End: Complemental strand, 16882851 - 16882692
Alignment:
Q  79 aacctaattctaacatctgaatagcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacct 178  Q
    |||||| |||||||||| ||| | ||||| ||| ||||||||||| ||| | || | |||||| ||||||||| ||||||| |||||||  |||||||||    
T  16882851 aacctatttctaacatcagaacaacaattcctacactcaattcacccaata-cctagaattcaacataaaccccaaaattctcaattctcacataaacct 16882753  T
Q  179 gttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||  ||||||||||||| |  ||||| |||| ||||| | |||||||||||||||||    
T  16882752 gttaaaatcaaaatcagaatttatcaactacactattgaagtaaacctcacccttacctta 16882692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 24237784 - 24237690
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    |||| |||||| |||||| ||||  ||||||||||||||||||||||| || | |||||||||  ||||||||||||||||||||||||||||||    
T  24237784 tccccaaaatcccatttttcttcaattcactccccaaatcagtttacagatatgaaactaagtgttgtctacaaccagaacctaattctaacatc 24237690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 11140483 - 11140248
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaat 100  Q
    |||||||||||||||||| || |  | |||||||||||| |||||||| |||  |||||||||  ||| | |||||||||||||||||||||||| |||     
T  11140483 tcccaaaaatctcatttttctccaatgcactccccaaattagtttacagatgctaaactaagtgttgtatgcaaccagaacctaattctaacatcagaac 11140384  T
Q  101 agcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaa-ttctatcataaacctgttaaatccaaaatcagaatt 199  Q
      |||| ||||         ||| ||||| || |||||||| |||||| || ||||  ||||| ||||| || || | |||| || ||||||||||||||    
T  11140383 cacaatctcta---------cacccaaaacccaataattcatcataaa-cctaaaacccccaatttctaccaaaagcttgttgaa-ccaaaatcagaatt 11140295  T
Q  200 caataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
     |||||||| |||| ||||||| |||||||||||||||||| |||||    
T  11140294 gaataactacactattgaagcaaacctcacccttaccttaaatcaga 11140248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 26 - 239
Target Start/End: Complemental strand, 29553800 - 29553597
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    |||||||||||||| ||||||||||||  ||| |||||  | | | |||||||||||||||||||||||| |||   |||| ||||         | |||    
T  29553800 ttcactccccaaattagtttacatatgctaaattaagtgttatatgcaaccagaacctaattctaacatcagaaccacaatctcta---------ctctc 29553710  T
Q  126 aaaaacccataattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagac 224  Q
    |||| ||  ||||||| ||||||||  ||||||| ||||| ||| || ||||||||||||  |||||||||||  |||||||||||||||||||||| ||    
T  29553709 aaaacccactaattcaacataaacct-aaaattctcaatttctacca-aaacctgttaaactcaaaatcagaacacaataactatactactgaagcaaac 29553612  T
Q  225 ctcacccttacctta 239  Q
    |||||||||||||||    
T  29553611 ctcacccttacctta 29553597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 121 - 238
Target Start/End: Original strand, 21736036 - 21736152
Alignment:
Q  121 cactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagc 220  Q
    ||||| ||| || |||||||||||||||||  |||||||||||||||| || ||||||||||||  ||||||||||||| | || ||| |||| |||||     
T  21736036 cactcgaaacccaataattcaccataaacct-aaaattcccaattctaacaaaaacctgttaaaatcaaaatcagaattaagtatctacactattgaagt 21736134  T
Q  221 agacctcacccttacctt 238  Q
    | ||||||||||||||||    
T  21736135 aaacctcacccttacctt 21736152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 26 - 246
Target Start/End: Complemental strand, 15315856 - 15315646
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    ||||||||||||||  ||||||| ||||||||||||||  ||| | |||||||||||||||||||||||| ||| |||||| |||| || ||  | ||||    
T  15315856 ttcactccccaaattggtttacagatgtaaaactaagtgatgtatgcaaccagaacctaattctaacatcagaacagcaatctctacaccca--taactc 15315759  T
Q  126 aaaaacccataattcaccataaacccgaaaattccc-aattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagac 224  Q
    |       |||||||| || | | || ||||| ||| ||||| | || ||   |||||||| ||||||||||||| ||||||||||||| ||||||| |     
T  15315758 a-------ataattcatca-ataacctaaaatccccaaattccaccaaaagtttgttaaat-caaaatcagaatttaataactatactattgaagcaaat 15315668  T
Q  225 ctcacccttaccttaattcaga 246  Q
    ||||||||||||||||||||||    
T  15315667 ctcacccttaccttaattcaga 15315646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 242
Target Start/End: Original strand, 23634423 - 23634552
Alignment:
Q  113 actcaattcactcaaaaacccata-attcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattcaataactata 210  Q
    ||||||||||| |||||||| |   ||||| ||||||||| ||||| ||||||| ||| ||||||||||||||| |||||||||||||| || | |||||    
T  23634423 actcaattcacccaaaaaccaaaggattcaacataaaccc-aaaatccccaatttctaccataaacctgttaaa-ccaaaatcagaattaaaaatctata 23634520  T
Q  211 ctactgaagcagacctcacccttaccttaatt 242  Q
    ||||  ||||| ||||||||||||||||||||    
T  23634521 ctaccaaagcaaacctcacccttaccttaatt 23634552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 245
Target Start/End: Complemental strand, 30490711 - 30490580
Alignment:
Q  113 actcaattcactcaaaaacc-cataattcaccataaacccgaaaattccc-aattctatcataaacctgttaaatccaaaatcagaattcaataactata 210  Q
    ||||||||||| ||||||||  | |||||| |||||  || ||||| ||| ||||||| ||||||||||||||| |||||||||||||| || | ||| |    
T  30490711 actcaattcacccaaaaaccaaagaattcaacataa--cccaaaatccccaaattctaccataaacctgttaaa-ccaaaatcagaattaaacatctaca 30490615  T
Q  211 ctactgaagcagacctcacccttaccttaattcag 245  Q
    ||||||||| | |||||||||||||||||||||||    
T  30490614 ctactgaagtaaacctcacccttaccttaattcag 30490580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 114 - 239
Target Start/End: Complemental strand, 19665989 - 19665863
Alignment:
Q  114 ctcaattcactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgtt-aaatccaaaatcagaattcaataactatact 212  Q
    ||||| |||| |||||||| | |||||| ||||||||| |||||||||||||||  |||||||||||| |||  | ||||||||||| |  ||||| |||    
T  19665989 ctcaaatcacccaaaaacctagaattcaacataaaccccaaaattcccaattctcacataaacctgttaaaaatcgaaatcagaatttatcaactacact 19665890  T
Q  213 actgaagcagacctcacccttacctta 239  Q
    | ||||| | |||||||||||||||||    
T  19665889 attgaagtaaacctcacccttacctta 19665863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 121 - 239
Target Start/End: Original strand, 21665075 - 21665192
Alignment:
Q  121 cactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagc 220  Q
    ||||||||| || |||||||||||||||||  | |||||||||||||| |||||||||||||||  ||||||||||||| |  | ||| |||| |||||     
T  21665075 cactcaaaacccaataattcaccataaacct-acaattcccaattctaacataaacctgttaaaatcaaaatcagaattaaccatctacactattgaagt 21665173  T
Q  221 agacctcacccttacctta 239  Q
    | | |||||||||||||||    
T  21665174 aaatctcacccttacctta 21665192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 18419051 - 18419124
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||||||| |||||||||||||||||||||| | |  ||||| | ||||||||||||||||||||||||    
T  18419051 aaacctgttaaatacaaaatcagaattcaataactacattcttgaagtaaacctcacccttaccttaattcaga 18419124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 125 - 239
Target Start/End: Original strand, 19853936 - 19854049
Alignment:
Q  125 caaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagac 224  Q
    ||||| || |||||||||||||||||  |||||||||||||||| || ||||||||||||  ||||||||||||| |  | |||  ||| ||||| | ||    
T  19853936 caaaatccaataattcaccataaacct-aaaattcccaattctaacacaaacctgttaaaatcaaaatcagaattaaccatctacgctattgaagtaaac 19854034  T
Q  225 ctcacccttacctta 239  Q
    |||||||||||||||    
T  19854035 ctcacccttacctta 19854049  T

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Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 20076136 - 20076063
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||||||  ||||||||||| |||| | |||||||||||||| | ||||||||||||||||| ||||||    
T  20076136 aaacctgttaaactcaaaatcagaaatcaacatctatactactgaagtaaacctcacccttaccttagttcaga 20076063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 17150080 - 17150174
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    ||||||||||| |||||| |||||  |||||||||||||||||||||||||  | || |||||  | | | ||||||||| ||||||||||||||    
T  17150080 tcccaaaaatcccatttttcttccaatcactccccaaatcagtttacatatacataattaagtgttctatgcaaccagaaactaattctaacatc 17150174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 239
Target Start/End: Original strand, 19860071 - 19860184
Alignment:
Q  125 caaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagac 224  Q
    ||||| || ||||||||||||||| |  |||||||||||||||| || ||| ||||||||  ||||||||||||| |  | ||| |||| ||||| | ||    
T  19860071 caaaatccaataattcaccataaatct-aaaattcccaattctaacacaaatctgttaaaatcaaaatcagaattaaccatctacactattgaagtaaac 19860169  T
Q  225 ctcacccttacctta 239  Q
    |||||||||||||||    
T  19860170 ctcacccttacctta 19860184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 239
Target Start/End: Original strand, 24080515 - 24080580
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||||  ||||||||||||| || | |||||||||||||||| |||||||||||||||||    
T  24080515 aaacctgttaaactcaaaatcagaatt-aacatctatactactgaagcaaacctcacccttacctta 24080580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 18026104 - 18026011
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    ||||||||||||||||| |||||  |||||||||||||||||||||| ||  | || |||||  | | | ||||||||| ||||||||||||||    
T  18026104 cccaaaaatctcatttttcttccaatcactccccaaatcagtttacagatacataattaagtgttctatgcaaccagaaactaattctaacatc 18026011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 29601483 - 29601410
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||||||  | || ||||||||  |||||||||||||||||| | | ||||||||||||||||||||||    
T  29601483 aaacctgttaaactccaattcagaatttcataactatactactgaagtaaaactcacccttaccttaattcaga 29601410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 36918047 - 36918116
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||  ||||||||||| | |||  |||||||||||||| | ||||||||||||||||||||||||    
T  36918047 ctgttaaactcaaaatcagaaattaatgtctatactactgaagtaaacctcacccttaccttaattcaga 36918116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 3706142 - 3706095
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||||    
T  3706142 tcccaaaaatctcattttcctccaattcactccccaaatcagtttaca 3706095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 6741281 - 6741328
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  6741281 tcccaaaaatcccattttccttccaatcactccccaaatcagtttaca 6741328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 240
Target Start/End: Complemental strand, 24237619 - 24237556
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaa 240  Q
    ||||||||  ||||||||||| | || | |||||||||||||||| ||||||||||||||||||    
T  24237619 ctgttaaactcaaaatcagaaattaacatctatactactgaagcaaacctcacccttaccttaa 24237556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 29150589 - 29150538
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatg 52  Q
    ||||||||||| |||||| |||||  ||||||||||||||||||||||||||    
T  29150589 tcccaaaaatcccatttttcttccaatcactccccaaatcagtttacatatg 29150538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 31534653 - 31534606
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  31534653 tcccaaaaatcccattttccttccaatcactccccaaatcagtttaca 31534606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 31563370 - 31563323
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  31563370 tcccaaaaatcccattttccttccaatcactccccaaatcagtttaca 31563323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 9292469 - 9292519
Alignment:
Q  6 aaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaa 56  Q
    |||||| |||||| ||||| ||||||||||||||||||||||| |||||||    
T  9292469 aaaatcccatttttcttccattcactccccaaatcagtttacagatgtaaa 9292519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 18418890 - 18418936
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||| |||||| ||||| |||||||||||||||||||||||    
T  18418890 cccaaaaatcccatttttcttccattcactccccaaatcagtttaca 18418936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 239
Target Start/End: Complemental strand, 28555693 - 28555627
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||||  ||||||||||| ||| |||||| |||| ||||| | |||||||||||||||||    
T  28555693 aaacctgttaaactcaaaatcagaaatcagtaactacactattgaagtaaacctcacccttacctta 28555627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 38907405 - 38907359
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||| ||||||||||||  ||||||||||||||||||||||    
T  38907405 cccaaaaatcccattttccttccaatcactccccaaatcagtttaca 38907359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 39095087 - 39095133
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||| ||||||||||||  ||||||||||||||||||||||    
T  39095087 cccaaaaatcccattttccttccaatcactccccaaatcagtttaca 39095133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 239
Target Start/End: Original strand, 42627123 - 42627189
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||||  |||||||| || |||||||||| |||| ||||| | |||||||||||||||||    
T  42627123 aaacctgttaaactcaaaatcaaaaatcaataactacactattgaagtaaacctcacccttacctta 42627189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 242
Target Start/End: Original strand, 49328959 - 49329025
Alignment:
Q  176 cctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaatt 242  Q
    ||||||||| ||||| ||||||||  ||| |||||||||||||| | | ||||||||||||||||||    
T  49328959 cctgttaaacccaaattcagaatttcatatctatactactgaagtaaaactcacccttaccttaatt 49329025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 21921718 - 21921791
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||||||  | || ||||||||  ||||||||| |||||||| | | ||||||||||||||||||||||    
T  21921718 aaacctgttaaactccaattcagaatttcataactatattactgaagtaaaactcacccttaccttaattcaga 21921791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 240
Target Start/End: Original strand, 47485046 - 47485099
Alignment:
Q  187 caaaatcagaattcaataactatactactgaagcagacctcacccttaccttaa 240  Q
    ||||||||||| | || | |||||||||||||||| ||||||||||||||||||    
T  47485046 caaaatcagaaattaacatctatactactgaagcaaacctcacccttaccttaa 47485099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 954466 - 954422
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagttt 45  Q
    ||||||||||||||||||||| |  ||||||||||||||||||||    
T  954466 tcccaaaaatctcattttcctccaattcactccccaaatcagttt 954422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 245
Target Start/End: Original strand, 21963935 - 21964003
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcag 245  Q
    ||||||||  ||||||||||| |  | | |||||||||||||| | |||||||||||||||||||||||    
T  21963935 ctgttaaactcaaaatcagaaattgaaatctatactactgaagtaaacctcacccttaccttaattcag 21964003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 20076297 - 20076250
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| |||||| |||||  ||||||||||||||||||||||    
T  20076297 tcccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 20076250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 20293602 - 20293669
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaa 240  Q
    ||||||||||||  ||||||||||||| || | ||| |||| ||||| | ||||||||||||||||||    
T  20293602 aaacctgttaaactcaaaatcagaatttaaaatctacactattgaagtaaacctcacccttaccttaa 20293669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 20300233 - 20300300
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaa 240  Q
    ||||||||||||  ||||||||||||| || | ||| |||| ||||| | ||||||||||||||||||    
T  20300233 aaacctgttaaactcaaaatcagaatttaaaatctacactattgaagtaaacctcacccttaccttaa 20300300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 20571506 - 20571553
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| |||||| |||||  ||||||||||||||||||||||    
T  20571506 tcccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 20571553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 201
Target Start/End: Complemental strand, 20595341 - 20595298
Alignment:
Q  158 tcccaattctatcataaacctgttaaatccaaaatcagaattca 201  Q
    |||||||||| ||||||||||||||||  |||||||||||||||    
T  20595341 tcccaattctctcataaacctgttaaaatcaaaatcagaattca 20595298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 20595489 - 20595442
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| ||||||||| |  |||||||||||||||||||||||    
T  20595489 tcccaaaaatcccattttcctccaattcactccccaaatcagtttaca 20595442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 20823790 - 20823743
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| ||||||||| |  |||||||||||||||||||||||    
T  20823790 tcccaaaaatcccattttcctccaattcactccccaaatcagtttaca 20823743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 239
Target Start/End: Original strand, 17150242 - 17150307
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||||  |||||||||||| || |||||| |||| ||||| | |||||||||||||||||    
T  17150242 aaacctgttaaactcaaaatcagaat-cagtaactacactattgaagtaaacctcacccttacctta 17150307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 239
Target Start/End: Original strand, 20243489 - 20243571
Alignment:
Q  157 ttcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||| ||| ||||||||||||||||  |||||||||||||||  | |||||| | ||  | | |||||||||||||||||    
T  20243489 ttcccaactctttcataaacctgttaaaatcaaaatcagaattcagaatctatacaattgcggtaaacctcacccttacctta 20243571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 20300072 - 20300166
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    ||||||||||| |||||| |||||  ||||||||||||| |||||||| ||| ||||  ||    | | ||||||||||||| ||||||||||||    
T  20300072 tcccaaaaatcccatttttcttccaatcactccccaaattagtttacagatgaaaaatgaatgtttatatacaaccagaacccaattctaacatc 20300166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 48428616 - 48428662
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||| |||||| |||||  ||||||||||||||||||||||    
T  48428616 cccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 48428662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 199
Target Start/End: Complemental strand, 954318 - 954277
Alignment:
Q  158 tcccaattctatcataaacctgttaaatccaaaatcagaatt 199  Q
    |||||||||| |||||||||||||| | ||||||||||||||    
T  954318 tcccaattctctcataaacctgttacaaccaaaatcagaatt 954277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 20396104 - 20396035
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||  |||||||| |||| |||| ||| | || ||||| | ||||||||||||||||||||||||    
T  20396104 ctgttaaacacaaaatcaaaatttaatagctacaatattgaagtaaacctcacccttaccttaattcaga 20396035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 21733796 - 21733703
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacat 94  Q
    |||||||||||||| ||||||    ||||||||||||||||||||||| ||||  ||  || |  ||| | ||||||||||||| |||||||||    
T  21733796 tcccaaaaatctcaatttcctcaatttcactccccaaatcagtttacagatgtgcaatgaaatgttgtatgcaaccagaacctatttctaacat 21733703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 246
Target Start/End: Original strand, 24960863 - 24960921
Alignment:
Q  187 caaaatcagaattcaataactatactactga-agcagacctcacccttaccttaattcaga 246  Q
    |||||||||||||||||  |||||||| ||| || | ||||||||||||||||||||||||    
T  24960863 caaaatcagaattcaat--ctatactattgagagtaaacctcacccttaccttaattcaga 24960921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 28555854 - 28555761
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    |||||||||| |||||| |||||  ||||||||||||||| |||||| ||  |||| |||||  | | | ||||||||| | ||||||||||||    
T  28555854 cccaaaaatcccatttttcttccaatcactccccaaatcaatttacagatacaaaattaagtgttctatgcaaccagaaaccaattctaacatc 28555761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 42626963 - 42627008
Alignment:
Q  3 ccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||| |||||| |||||  ||||||||||||||||||||||    
T  42626963 ccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 42627008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 48428777 - 48428850
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||||||  |||| ||||| || ||   |||||||| ||||| | ||||||||||||||||||||||||    
T  48428777 aaacctgttaaactcaaattcagactttaaattctatactattgaagtaaacctcacccttaccttaattcaga 48428850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 23634325 - 23634385
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaa 61  Q
    ||||||||||| |||||||||    |||| ||||||||| |||||||| ||||||||||||    
T  23634325 tcccaaaaatcccattttcctcaatttcagtccccaaattagtttacagatgtaaaactaa 23634385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 239
Target Start/End: Complemental strand, 24108274 - 24108162
Alignment:
Q  125 caaaaacccataattcaccataaacccgaaaattcccaattct-atcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcaga 223  Q
    ||||||||  ||||||| || |||||| |||||| |||||||| | || ||||||||||||  |||  |||||||  |||| |||||||||||||| | |    
T  24108274 caaaaaccattaattcatcacaaaccc-aaaatttccaattctcaccaaaaacctgttaaactcaa--tcagaatcaaatatctatactactgaagtaaa 24108178  T
Q  224 cctcacccttacctta 239  Q
     |||||||||||||||    
T  24108177 actcacccttacctta 24108162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 37676169 - 37676225
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaa 57  Q
    |||| |||||| |||||| |||||  |||||||||||||||||||||| ||| ||||    
T  37676169 tccccaaaatcccatttttcttccaatcactccccaaatcagtttacagatgcaaaa 37676225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 37682840 - 37682896
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaa 57  Q
    |||| |||||| |||||| |||||  |||||||||||||||||||||| ||| ||||    
T  37682840 tccccaaaatcccatttttcttccaatcactccccaaatcagtttacagatgcaaaa 37682896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 2342 - 2097
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaat 100  Q
    |||| |||||| |||||||||    |||||||||||||| |||||||| || ||||||||| | |||| | ||||||||||||| ||||||||||  ||     
T  2342 tccccaaaatcccattttcctcaaattcactccccaaattagtttacagatataaaactaattgctgtatgcaaccagaacctatttctaacatcaaaac 2243  T
Q  101 agcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattc 200  Q
    | |||| |||| |||||||||||||||||||| | |||| |  |||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||    
T  2242 aacaatctctacactcaattcactcaaaaaccaagaattaaatataaaccccaaaatccccaattctatcataaacctgttaaacccaaaatcagaattc 2143  T
Q  201 aataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||    
T  2142 aatatctatactactgaagcaaacctcacccttaccttaattcaga 2097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 125; Significance: 2e-64; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 3 - 246
Target Start/End: Original strand, 30610 - 30853
Alignment:
Q  3 ccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatag 102  Q
    ||||||||||||||||| |    |||||||||||||| |||||||| || | ||||||| | |||| | ||||||||||||| |||||||||| ||| ||    
T  30610 ccaaaaatctcattttcttcaaattcactccccaaattagtttacagatatgaaactaaatgctgtatgcaaccagaacctatttctaacatcagaacag 30709  T
Q  103 caatttctatactcaattcactcaaaaacccat-aattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattca 201  Q
    |||| |||| |||||||||||||||||| |||| ||| || ||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  30710 caatctctacactcaattcactcaaaaatccattaatccaacataaaccc-aaaattctcaattctatcataaacctgttaaacccaaaatcagaattca 30808  T
Q  202 ataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||| |||||||||||||||| || |||||||||||||||||||||    
T  30809 atatctatactactgaagcaaacttcacccttaccttaattcaga 30853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 26 - 246
Target Start/End: Original strand, 45298 - 45517
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    |||||||||||||||||||| || |||||||||||| |  |||   ||||||||||||| || | |||||  || || ||| |||| |||||||||||||    
T  45298 ttcactccccaaatcagttt-cagatgtaaaactaaatgttgtacgcaaccagaacctatttttgacatcaaaacagtaatctctacactcaattcactc 45396  T
Q  126 aaaaaccca-taattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcaga 223  Q
    ||||||||| |||| |  ||||||||  ||||| ||||||| | | ||||||  ||||||| ||||||||||||||||||| |||||||||||||||| |    
T  45397 aaaaacccaataatccctcataaacct-aaaatccccaatttccaccataaaattgttaaa-ccaaaatcagaattcaatatctatactactgaagcaaa 45494  T
Q  224 cctcacccttaccttaattcaga 246  Q
     ||||||||||||||||||||||    
T  45495 tctcacccttaccttaattcaga 45517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 117; Significance: 1e-59; HSPs: 90)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 26 - 246
Target Start/End: Original strand, 20188560 - 20188780
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    |||||||||||||| |||||||| | | || |||||||| | | | ||||||||||||||||||| |||| ||||| ||||||||| |||||||||||||    
T  20188560 ttcactccccaaattagtttacagaagcaagactaagtattatatgcaaccagaacctaattctaccatcagaatatcaatttctacactcaattcactc 20188659  T
Q  126 aaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacc 225  Q
    || ||  |||||| || ||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  | | |    
T  20188660 aagaaaacataatccaacataaaccccaaaatccctaattctatcataaacctgttaaatccaaaatcagaattcaataactatattactgaaataaatc 20188759  T
Q  226 tcacccttaccttaattcaga 246  Q
    |||||||||||||||||||||    
T  20188760 tcacccttaccttaattcaga 20188780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 26 - 239
Target Start/End: Complemental strand, 13667300 - 13667087
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    |||||||||||||| |||||||| | | ||||||||||||| | | ||||||||||||||||||| ||||  || | ||||||||| |||||||||||||    
T  13667300 ttcactccccaaattagtttacagaagcaaaactaagtactatatgcaaccagaacctaattctaccatcataacatcaatttctacactcaattcactc 13667201  T
Q  126 aaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacc 225  Q
    || ||  |||||| || ||||||||| ||||| || |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| || | |    
T  13667200 aagaaaacataatccaacataaaccccaaaatccctaattctatcataaacctgttaaatccaaaatccgaattcaataactatattactgaaacaaatc 13667101  T
Q  226 tcacccttacctta 239  Q
    ||||||||||||||    
T  13667100 tcacccttacctta 13667087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 26 - 242
Target Start/End: Complemental strand, 11849810 - 11849594
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    |||||||||||||| |||||||| | | || |||||||| | | | ||||||||||||||||||| |||| ||| | ||||||||| |||||||||||||    
T  11849810 ttcactccccaaattagtttacagaagcaagactaagtaatatatgcaaccagaacctaattctaccatcagaacatcaatttctacactcaattcactc 11849711  T
Q  126 aaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacc 225  Q
    || ||  |||||| || ||||||||| ||||| || |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| || | |    
T  11849710 aagaaaacataatccaacataaaccccaaaatccctaattctatcataaacctgttaaatccaaaatccgaattcaataactatattactgaaacaaatc 11849611  T
Q  226 tcacccttaccttaatt 242  Q
    |||||||||||||||||    
T  11849610 tcacccttaccttaatt 11849594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 76 - 246
Target Start/End: Complemental strand, 11644119 - 11643948
Alignment:
Q  76 cagaacctaattctaacatctgaatagcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaa 175  Q
    ||||||||| |||||||||| ||| |||||| |||| |||||| |||| |||||||| | |||||| ||||||||| ||||||| |||||||| ||||||    
T  11644119 cagaacctatttctaacatcagaacagcaatctctacactcaaatcacccaaaaacctagaattcaacataaaccccaaaattctcaattctaacataaa 11644020  T
Q  176 cctgtt-aaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    |||||| |||  |||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||    
T  11644019 cctgttaaaaatcaaaatcagaattcaacaactatattactgaagcaaacctcacccttaccttaattcaga 11643948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 26 - 246
Target Start/End: Complemental strand, 15934309 - 15934089
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    |||||||||||| |||||||||| |||||||||||| | |||| | |||||| |||||| ||||||||||  || || ||| |||  |||||||| ||||    
T  15934309 ttcactccccaagtcagtttacagatgtaaaactaaatgctgtatgcaaccataacctatttctaacatcaaaacagtaatatctgcactcaatttactc 15934210  T
Q  126 aaaaaccca-taattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcaga 223  Q
    ||||||||| |||| || ||||||||| ||| | ||||||| ||| ||||||| ||||||||| ||||||||||||||| | |||||||||||||||| |    
T  15934209 aaaaacccaataatccaacataaaccccaaa-tccccaatttctaccataaacttgttaaatc-aaaatcagaattcaacatctatactactgaagcaaa 15934112  T
Q  224 cctcacccttaccttaattcaga 246  Q
    |||||||||||||||||||||||    
T  15934111 cctcacccttaccttaattcaga 15934089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 26 - 246
Target Start/End: Complemental strand, 15954314 - 15954094
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    |||||||||||| |||||||||| |||||||||||| |  ||| | ||||||||||||| ||||||||||  || |  ||| |||  |||||||||||||    
T  15954314 ttcactccccaagtcagtttacagatgtaaaactaaatgttgtatgcaaccagaacctatttctaacatcaaaacaataatctctgcactcaattcactc 15954215  T
Q  126 aaaaaccca-taattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcaga 223  Q
    ||||||||| |||| || ||||||||| ||| | ||||||| ||| ||||||| ||||||||| ||||||||||||||| | |||||||||||||||| |    
T  15954214 aaaaacccaataatccaacataaaccccaaa-tccccaatttctaccataaacttgttaaatc-aaaatcagaattcaacatctatactactgaagcaaa 15954117  T
Q  224 cctcacccttaccttaattcaga 246  Q
    |||||||||||||||||||||||    
T  15954116 cctcacccttaccttaattcaga 15954094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 26 - 244
Target Start/End: Original strand, 12275080 - 12275302
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    ||||||||||||||||||||||| |||||| ||||| | |||| | ||||||||||||| ||||||||||  || || ||| |||| |||||||||||||    
T  12275080 ttcactccccaaatcagtttacagatgtaatactaaatgctgtatgcaaccagaacctatttctaacatcaaaacagtaatctctacactcaattcactc 12275179  T
Q  126 aaaaaccc-ataattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagca-- 221  Q
    |||||||| |||||||| ||||||||| ||||| ||||||| ||| ||  ||||||||||| |||||||||||||  || | ||||||||||||||||      
T  12275180 aaaaacccaataattcaacataaaccccaaaatccccaattcctaccaataacctgttaaa-ccaaaatcagaatcaaacatctatactactgaagcaaa 12275278  T
Q  222 -gacctcacccttaccttaattca 244  Q
      ||||||||||||||||||||||    
T  12275279 ccacctcacccttaccttaattca 12275302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 26 - 246
Target Start/End: Original strand, 17496999 - 17497219
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    ||||||||||||||  ||||||| |||| |||  |  |||||| | ||  ||||||||| ||||  |||| ||| | |||| |||| |||||| |||| |    
T  17496999 ttcactccccaaattggtttacagatgtgaaataacttactgtatgcactcagaacctatttctgtcatcagaacaacaatctctacactcaaatcaccc 17497098  T
Q  126 aaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacc 225  Q
    ||||||| | |||||  ||||||||| |||||||||||||||| |||||||||||||||  |||||||| ||||||| ||||||| |||||||||| |||    
T  17497099 aaaaacctagaattcgacataaaccccaaaattcccaattctaacataaacctgttaaaatcaaaatcaaaattcaacaactatattactgaagcaaacc 17497198  T
Q  226 tcacccttaccttaattcaga 246  Q
    |||||||||||||||||||||    
T  17497199 tcacccttaccttaattcaga 17497219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 79 - 239
Target Start/End: Original strand, 15519341 - 15519501
Alignment:
Q  79 aacctaattctaacatctgaatagcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacct 178  Q
    |||||| |||||||||| ||| | ||||| ||| ||||||||||| |||||||| | |||||| ||||||||| |||||||||||||||  |||||||||    
T  15519341 aacctatttctaacatcagaacaacaattcctacactcaattcacccaaaaacctagaattcaacataaaccccaaaattcccaattctcacataaacct 15519440  T
Q  179 gttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||  ||||||||||||| |  ||||| |||| ||||||| |||||||||||||||||    
T  15519441 gttaaaatcaaaatcagaatttatcaactacactattgaagcaaacctcacccttacctta 15519501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 27029133 - 27029039
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    ||||||||||| |||||||||||  ||||||||||||||  ||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||    
T  27029133 tcccaaaaatcccattttccttcaattcactccccaaattggtttacagatgtagaactaagtactgtctacaaccagaacctaattcaaacatc 27029039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 2 - 246
Target Start/End: Original strand, 13692729 - 13692962
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaata 101  Q
    |||||||||| |||||||||    |||||||||||||| |||||||  ||| | ||||||||  ||| | |||| ||||||||||||||||||| ||| |    
T  13692729 cccaaaaatcccattttcctcatattcactccccaaattagtttactgatgcataactaagtgttgtatgcaactagaacctaattctaacatcagaaca 13692828  T
Q  102 gcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattca 201  Q
     |||| ||||         ||| ||||| || |||||||| ||||||||   |||| |||||||||  |  |||| ||||||| ||||||||||||||||    
T  13692829 tcaatctcta---------cacccaaaacccaataattcatcataaacct--aaatccccaattcttaccaaaacttgttaaacccaaaatcagaattca 13692917  T
Q  202 ataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
     |||| |||||| ||||||| ||||||||||||||||||||||||    
T  13692918 ttaaccatactattgaagcaaacctcacccttaccttaattcaga 13692962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 11963554 - 11963460
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    |||| |||||| |||||| ||||  |||||||||||||| |||| ||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  11963554 tccccaaaatcccatttttcttcaattcactccccaaattagttaacagatgtaaaactaagtgctgtctacaaccagaacctaattctaacatc 11963460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 246
Target Start/End: Original strand, 12203084 - 12203317
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaata 101  Q
    ||||||||||||||||||||    |||||||||||||| |||||||| ||| ||||||||||  ||| | || | ||||||||||||||||||| ||| |    
T  12203084 cccaaaaatctcattttcctcaatttcactccccaaattagtttacagatgcaaaactaagtgttgtatgcatctagaacctaattctaacatcagaaca 12203183  T
Q  102 gcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattc 200  Q
    ||||| ||||         ||| ||||| || |||||||| ||||||||   |||| ||||||| ||| || |||| ||||||| ||||||| |||||||    
T  12203184 gcaatctcta---------cacccaaaacccaataattcatcataaacc--taaatccccaattcctacca-aaacttgttaaacccaaaattagaattc 12203271  T
Q  201 aataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    | |||| | |||| ||||||| ||||||| ||||||||||||||||    
T  12203272 attaaccacactattgaagcaaacctcacgcttaccttaattcaga 12203317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 16833977 - 16834071
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    |||| |||||| ||||||  |||  ||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  16833977 tccccaaaatcccattttttttcaattcactcccgaaatcagtttacagatgtaaaactaagtactgtctacaaccggaacctaattctaacatc 16834071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 246
Target Start/End: Original strand, 12153666 - 12153896
Alignment:
Q  6 aaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaa 105  Q
    |||||| ||||||||| |  |||||||||||||| |||||||| ||  ||||||||||| | | | |||||||||||||||||||||||| ||| | |||    
T  12153666 aaaatcccattttcctccaattcactccccaaattagtttacagatacaaaactaagtaatatatgcaaccagaacctaattctaacatcagaacaacaa 12153765  T
Q  106 tttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattcaata 204  Q
    | ||||         ||| ||||| || |||||||| ||  ||||  ||||| || |||| ||| || || | ||||||| ||||||||||| |||||||    
T  12153766 tctcta---------cacccaaaatccaataattcatcaataacct-aaaatccctaatttctaccaaaagcttgttaaa-ccaaaatcagagttcaata 12153854  T
Q  205 actatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||||||| ||| ||||||||||||||||||||||||    
T  12153855 actatactactgaggcaaacctcacccttaccttaattcaga 12153896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 12537108 - 12536873
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaat 100  Q
    ||||||||||| |||||||||    |||||||||||||| |||||||| ||| ||||||||||  ||| | |||||||||||||||||||||||  |||     
T  12537108 tcccaaaaatcccattttcctcaaattcactccccaaattagtttacagatgcaaaactaagtgttgtatgcaaccagaacctaattctaacattagaac 12537009  T
Q  101 agcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaatt 199  Q
    | |||| |||| || |||   |||||| ||| ||| |      ||||  || ||||| ||||||| ||| || || | ||||||| ||||||||||||||    
T  12537008 aacaatctctacacccaaa--actcaataactcatta------ataa--cctaaaatccccaatttctaccaaaagcttgttaaa-ccaaaatcagaatt 12536920  T
Q  200 caataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  12536919 caataactacactattgaagcaaacctcacccttaccttaattcaga 12536873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 27034252 - 27034160
Alignment:
Q  3 ccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    ||||||||| |||||||||||  ||||||||||||||  ||||||| ||||| ||||||||| ||||||||||||||||||||||| ||||||    
T  27034252 ccaaaaatcccattttccttcaattcactccccaaattggtttacagatgtagaactaagtattgtctacaaccagaacctaattccaacatc 27034160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 121 - 239
Target Start/End: Complemental strand, 2269527 - 2269410
Alignment:
Q  121 cactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagc 220  Q
    |||||||||  | |||||||||||||||||  |||||| ||| ||||| |||||||||||||||  ||||||||||||||| |||||| |||| ||||||    
T  2269527 cactcaaaactcaataattcaccataaacct-aaaatttccagttctaacataaacctgttaaaatcaaaatcagaattcattaactacactattgaagc 2269429  T
Q  221 agacctcacccttacctta 239  Q
    | |||||| ||||||||||    
T  2269428 aaacctcatccttacctta 2269410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 127 - 244
Target Start/End: Complemental strand, 10596942 - 10596825
Alignment:
Q  127 aaaacccat-aattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacc 225  Q
    ||||||||| ||||||  |||||||| ||| ||||||| ||||||| ||||||||||||  |||||||||||| ||||| |||||||||||||| | | |    
T  10596942 aaaacccattaattcaatataaaccc-aaatttcccaactctatcaaaaacctgttaaaatcaaaatcagaatccaatatctatactactgaagtaaaac 10596844  T
Q  226 tcacccttaccttaattca 244  Q
    |||||||||||||||||||    
T  10596843 tcacccttaccttaattca 10596825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 173 - 239
Target Start/End: Complemental strand, 18718363 - 18718297
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  18718363 aaacctgttaaattcaaaatcagaactcaataactatactactgaagcaaacctcacccttacctta 18718297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 14570768 - 14570840
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    |||||||||||| ||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||    
T  14570768 aaacctgttaaa-ccaaaatcagaattcaatatctattctactgaagcaaacctcacccttaccttaattcaga 14570840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 173 - 239
Target Start/End: Original strand, 12256530 - 12256596
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||| ||||    
T  12256530 aaacctgttaaattcaaaatcagaactcaataactatactactgaagcaaacctcacccttagctta 12256596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 11956000 - 11955907
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacat 94  Q
    |||| |||||| |||||| ||||  |||||||||||||| |||| ||| |||||||||||||| ||||||||||| ||||||||||||| ||||    
T  11956000 tccccaaaatcccatttttcttcaattcactccccaaattagttaacagatgtaaaactaagtgctgtctacaactagaacctaattcttacat 11955907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 246
Target Start/End: Complemental strand, 16823185 - 16822942
Alignment:
Q  3 ccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatag 102  Q
    |||||||||||| ||||||    |||||||| |||||||||||||| ||||| || ||| |  ||| | |   || |||||| ||||||||||  |||||    
T  16823185 ccaaaaatctcaatttcctcaatttcactcctcaaatcagtttacagatgtataattaaatgttgtatgccctcataacctatttctaacatcaaaatag 16823086  T
Q  103 caatttctatactcaattcactcaaaaacccat-aattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattc 200  Q
      ||| ||| || |||||||| |||||||| |  |||||| | ||||||| ||||| ||||||| ||| ||||||||||||||||| |||||||||||      
T  16823085 tgattcctacacacaattcacccaaaaaccaaggaattcaacttaaaccc-aaaatccccaatttctaccataaacctgttaaatc-aaaatcagaataa 16822988  T
Q  201 aataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    || |  ||||||| ||||||| |||||||| |||||||||||||||    
T  16822987 aaaatgtatactattgaagcaaacctcaccattaccttaattcaga 16822942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 125 - 246
Target Start/End: Complemental strand, 11305032 - 11304911
Alignment:
Q  125 caaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaa-taactatactactgaagcaga 223  Q
    ||||| || |||||||||||||||||  ||||||||||||| | ||||||||||||||||  ||||||||| ||| ||  | ||| |||| ||||| | |    
T  11305032 caaaacccaataattcaccataaacct-aaaattcccaattttctcataaacctgttaaaatcaaaatcaggatttaaccatctacactattgaagtaaa 11304934  T
Q  224 cctcacccttaccttaattcaga 246  Q
    |||||||||||||||||||||||    
T  11304933 cctcacccttaccttaattcaga 11304911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 121 - 239
Target Start/End: Complemental strand, 12355298 - 12355181
Alignment:
Q  121 cactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagc 220  Q
    ||||||||| || ||| |||||||||||||  |||||||||||||| | || ||||||||||||  ||||||||||||| | || ||| |||| |||||     
T  12355298 cactcaaaacccaatatttcaccataaacct-aaaattcccaattccaacaaaaacctgttaaaatcaaaatcagaattaagtatctacactattgaagt 12355200  T
Q  221 agacctcacccttacctta 239  Q
    | |||||||||||||||||    
T  12355199 aaacctcacccttacctta 12355181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 114 - 239
Target Start/End: Original strand, 12364285 - 12364410
Alignment:
Q  114 ctcaattcactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatacta 213  Q
    ||||||||| ||||||| |||||||||| ||||||||| |||||||||||||||  ||||||||||| |||  |||||| |||||  |  ||||| || |    
T  12364285 ctcaattcattcaaaaatccataattcaacataaaccccaaaattcccaattctcacataaacctgtcaaaatcaaaattagaatctatcaactacacaa 12364384  T
Q  214 ctgaagcagacctcacccttacctta 239  Q
     |||||   |||||||||||||||||    
T  12364385 ttgaagtgaacctcacccttacctta 12364410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 16413520 - 16413451
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||  ||||||||||| |||||||||||| |||||||| | ||||||||||||||||| ||||||    
T  16413520 ctgttaaacacaaaatcagaaatcaataactatattactgaagtaaacctcacccttaccttagttcaga 16413451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 15375390 - 15375437
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||    
T  15375390 tcccaaaaatcccattttccttccattcactccccaaatcagtttaca 15375437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 10768503 - 10768597
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    ||||||||||| ||||||||||||  |||||||||||||||||||||| ||  | || |||||  | | | ||||||||||| ||||||||||||    
T  10768503 tcccaaaaatcccattttccttccaatcactccccaaatcagtttacagatacataattaagtgttctatgcaaccagaacccaattctaacatc 10768597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 239
Target Start/End: Complemental strand, 13967861 - 13967799
Alignment:
Q  178 tgttaaatc-caaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||| |||| ||||||||||||||||||| |||||||||| | |||||||||||||||    
T  13967861 tgttaaatcacaaattcagaattcaataactatattactgaagcaaatctcacccttacctta 13967799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 239
Target Start/End: Complemental strand, 13973336 - 13973274
Alignment:
Q  178 tgttaaatc-caaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||| |||| ||||||||||||||||||| |||||||||| | |||||||||||||||    
T  13973336 tgttaaatcacaaattcagaattcaataactatattactgaagcaaatctcacccttacctta 13973274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 16834143 - 16834205
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||  ||||||||||| | ||||| ||||||||||||||| |||||||||||||||||    
T  16834143 ctgttaaacacaaaatcagaaattaataattatactactgaagcaaacctcacccttacctta 16834205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 239
Target Start/End: Complemental strand, 18127805 - 18127719
Alignment:
Q  153 aaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    |||||| ||||||||| |||||||||||||||  ||||||||||||| |  | ||| |||| ||||| | |||||||||||||||||    
T  18127805 aaaatttccaattctaacataaacctgttaaaatcaaaatcagaattaatcatctacactattgaagtaaacctcacccttacctta 18127719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 239
Target Start/End: Complemental strand, 18135575 - 18135489
Alignment:
Q  153 aaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    |||||| ||||||||| |||||||||||||||  ||||||||||||| |  | ||| |||| ||||| | |||||||||||||||||    
T  18135575 aaaatttccaattctaacataaacctgttaaaatcaaaatcagaattaatcatctacactattgaagtaaacctcacccttacctta 18135489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 135 - 244
Target Start/End: Complemental strand, 18756215 - 18756107
Alignment:
Q  135 taattcaccataaacccgaaaattcccaattct-atcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcaccctt 233  Q
    |||||||||| | |||| ||||||||||||||| | || ||||||||||||  |||| ||||||||||||| |||||||||| ||| | |  ||||||||    
T  18756215 taattcaccacacaccc-aaaattcccaattctcaccaaaaacctgttaaactcaaa-tcagaattcaatacctatactactaaagtaaaagtcaccctt 18756118  T
Q  234 accttaattca 244  Q
    |||||||||||    
T  18756117 accttaattca 18756107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 27034087 - 27034026
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||  ||||||||||||| |||| |||||||||||||||| |||||||||||||||||    
T  27034087 ctgttaaacacaaaatcagaatt-aatagctatactactgaagcaaacctcacccttacctta 27034026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 45612401 - 45612495
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    ||||||||||| ||||||||||||  |||||||||||||||||||||| ||  | || |||||  | | | ||||||||||| ||||||||||||    
T  45612401 tcccaaaaatcccattttccttccaatcactccccaaatcagtttacagatacataattaagtgttctatgcaaccagaacccaattctaacatc 45612495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 12960653 - 12960548
Alignment:
Q  135 taattcaccataaacccgaaaattcccaatt--ctatcataaacctgttaaa-tccaaaatcagaattcaataactatactactgaagcagacctcaccc 231  Q
    ||||||| ||||||||  |||||||||||||  ||| || |||||||||||| || ||||||||||||||  | |||||||| ||||||| |||||||||    
T  12960653 taattcaacataaacct-aaaattcccaattttctacca-aaacctgttaaactcaaaaatcagaattcagaatctatactaatgaagcaaacctcaccc 12960556  T
Q  232 ttacctta 239  Q
    ||||||||    
T  12960555 ttacctta 12960548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 238
Target Start/End: Original strand, 18961849 - 18961932
Alignment:
Q  155 aattcccaattct-atcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctt 238  Q
    ||||||||||||| | || ||||||||||||  ||||||||||||| || | |||||||| ||||||| ||||||||||||||||    
T  18961849 aattcccaattctcaccaaaaacctgttaaactcaaaatcagaatt-aacatctatactattgaagcaaacctcacccttacctt 18961932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 8373160 - 8373089
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattca 244  Q
    ||||||||||||| ||||||||||| | || |  || |||||||||||| ||||||||||||||| ||||||    
T  8373160 aaacctgttaaattcaaaatcagaaattaacatttacactactgaagcaaacctcacccttacctgaattca 8373089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 9690873 - 9690826
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||||  ||||||||||| |||||||||||||||||||||||    
T  9690873 tcccaaaaatccaattttccttccattcactccccaaatcagtttaca 9690826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 9771324 - 9771277
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||||||||||| |||||  ||||||||||||||||||||||    
T  9771324 tcccaaaaatctcatttttcttccaatcactccccaaatcagtttaca 9771277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 240
Target Start/End: Complemental strand, 11963388 - 11963325
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaa 240  Q
    ||||||||  ||||||||||| | || | |||||||||||||||| ||||||||||||||||||    
T  11963388 ctgttaaactcaaaatcagaaattaacatctatactactgaagcaaacctcacccttaccttaa 11963325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 240
Target Start/End: Complemental strand, 30596103 - 30596036
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaa 240  Q
    ||||||||||||  ||||||||||| | |||||||| |||| ||||| | ||||||||||||||||||    
T  30596103 aaacctgttaaactcaaaatcagaaattaataactacactattgaagtaaacctcacccttaccttaa 30596036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 2498447 - 2498337
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaat 100  Q
    ||||||||||| ||||||||||||  ||||||||||||| |||||||| ||| ||||  ||    | | | ||||||||||| |||||||||||| |||     
T  2498447 tcccaaaaatcccattttccttccaatcactccccaaattagtttacagatgaaaaataaatgtttctatgcaaccagaacccaattctaacatcagaac 2498348  T
Q  101 agcaatttcta 111  Q
    |||||| ||||    
T  2498347 agcaatatcta 2498337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 6926857 - 6926795
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||  |||||||||||||||||||||| |||| ||||| | || ||||||||||||||    
T  6926857 ctgttaaacacaaaatcagaattcaataactacactattgaagtaaacttcacccttacctta 6926795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 239
Target Start/End: Complemental strand, 9771161 - 9771095
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||||  ||||||||||| |||||||| | |||| ||||| | |||||||||||||||||    
T  9771161 aaacctgttaaactcaaaatcagaaatcaataacaacactattgaagtaaacctcacccttacctta 9771095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 239
Target Start/End: Complemental strand, 11964204 - 11964087
Alignment:
Q  121 cactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagc 220  Q
    ||||||||| || ||||||||||| |||||  |||||| |||||||||  | ||| ||||||||  |||||||||||||||  | ||| || | |||||     
T  11964204 cactcaaaacccaataattcaccaaaaacct-aaaatttccaattctaaaaaaaagctgttaaaatcaaaatcagaattcagaatctacacaattgaagt 11964106  T
Q  221 agacctcacccttacctta 239  Q
    | |||||||||||||||||    
T  11964105 aaacctcacccttacctta 11964087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 12201007 - 12201057
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatat 51  Q
    ||||||||||| |||||||||||   |||||||||||||||||||||||||    
T  12201007 tcccaaaaatcccattttccttcaaatcactccccaaatcagtttacatat 12201057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 121 - 239
Target Start/End: Complemental strand, 12478972 - 12478855
Alignment:
Q  121 cactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagc 220  Q
    ||||||||| || ||| |||||||||||||  ||||||| |||||| | || |||| |||||||  ||||||||||||| | || ||| |||| |||||     
T  12478972 cactcaaaatccaatatttcaccataaacct-aaaattctcaattccaacaaaaacttgttaaaatcaaaatcagaattaagtatctacactattgaagt 12478874  T
Q  221 agacctcacccttacctta 239  Q
    | ||||||||| |||||||    
T  12478873 aaacctcacccgtacctta 12478855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 15375557 - 15375619
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||  |||||| |||| | |||| |||||||||||||||| |||||||||||||||||    
T  15375557 ctgttaaactcaaaattagaaattaatagctatactactgaagcaaacctcacccttacctta 15375619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 16330853 - 16330791
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||  ||||||||||||| |||| ||||||||||| |||| |||||||| ||||||||    
T  16330853 ctgttaaacacaaaatcagaatttaatagctatactactggagcaaacctcaccattacctta 16330791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 239
Target Start/End: Original strand, 45612563 - 45612629
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||||| ||||||||||||| |||||||| | |  ||||| | |||||||||||||||||    
T  45612563 aaacctgttaaatacaaaatcagaatttaataactacattcttgaagtaaacctcacccttacctta 45612629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 239
Target Start/End: Complemental strand, 54090978 - 54090912
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||||  ||||||||||| | || | |||||||||||||| | |||||||||||||||||    
T  54090978 aaacctgttaaactcaaaatcagaaattaaaatctatactactgaagtaaacctcacccttacctta 54090912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 18756313 - 18756240
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaa 99  Q
    ||||||||||||||  ||||||| ||  | ||||||||||| | | |||||||||||||||||||||||| |||    
T  18756313 ttcactccccaaattggtttacagatacagaactaagtactatatgcaaccagaacctaattctaacatcagaa 18756240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 238
Target Start/End: Complemental strand, 19343505 - 19343444
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctt 238  Q
    ||||||||  ||||||||||| | |||||||| |||| ||||||| ||||||||||||||||    
T  19343505 ctgttaaactcaaaatcagaaattaataactacactattgaagcaaacctcacccttacctt 19343444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 20376486 - 20376413
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||||||  | || ||||||||  |||||||||||||||||| | | ||||||||||| ||||||||||    
T  20376486 aaacctgttaaactccaattcagaatttcataactatactactgaagtaaaactcacccttacattaattcaga 20376413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 29551841 - 29551914
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||||||  | || ||||||||  ||| |||||||||||||| | | ||||||||||||||||||||||    
T  29551841 aaacctgttaaactccaattcagaatttcatatctatactactgaagtaaaactcacccttaccttaattcaga 29551914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 891933 - 891889
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagttta 46  Q
    |||||||||| ||||||||||||  ||||||||||||||||||||    
T  891933 cccaaaaatcccattttccttccaatcactccccaaatcagttta 891889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 30099608 - 30099528
Alignment:
Q  159 cccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    |||||||||  |||||  ||||||||  |||||||||||||||||||||| | |  ||||| | |||||||||||||||||    
T  30099608 cccaattctcccataactctgttaaacacaaaatcagaattcaataactacattcttgaagtaaacctcacccttacctta 30099528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 6927014 - 6926967
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| |||||| |||||  ||||||||||||||||||||||    
T  6927014 tcccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 6926967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 240
Target Start/End: Complemental strand, 11955834 - 11955771
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaa 240  Q
    ||||||||  ||||||||||| | || | |||||||||||||||| |||||||| |||||||||    
T  11955834 ctgttaaactcaaaatcagaaattaacatctatactactgaagcaaacctcacctttaccttaa 11955771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 228
Target Start/End: Complemental strand, 12361797 - 12361691
Alignment:
Q  121 cactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagc 220  Q
    ||||||||| || ||| || ||||||||||  |||||||||||||| | || ||||||||||||  ||||||||||||| | || ||| |||| |||||     
T  12361797 cactcaaaacccaatatttgaccataaacct-aaaattcccaattccaacaaaaacctgttaaaatcaaaatcagaattaagtatctacactattgaagt 12361699  T
Q  221 agacctca 228  Q
    | ||||||    
T  12361698 aaacctca 12361691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 240
Target Start/End: Complemental strand, 12724369 - 12724306
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaa 240  Q
    ||||||||  |||| |||||| | |||  |||||||||||||||| ||||||||||||||||||    
T  12724369 ctgttaaactcaaattcagaaattaatctctatactactgaagcaaacctcacccttaccttaa 12724306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 95
Target Start/End: Complemental strand, 12960750 - 12960683
Alignment:
Q  28 cactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    ||||||||||||||||||||| || | ||||||| |  ||| | ||||||||||||| ||||||||||    
T  12960750 cactccccaaatcagtttacagatatgaaactaaatgttgtatgcaaccagaacctatttctaacatc 12960683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 15081304 - 15081371
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaa 240  Q
    ||||||||||||  ||||||||||| ||| |||||| | || ||||| | ||||||||||||||||||    
T  15081304 aaacctgttaaactcaaaatcagaaatcagtaactacattattgaagtaaacctcacccttaccttaa 15081371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 16829346 - 16829299
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| |||||||||||  |||||||||||||| ||||||||    
T  16829346 tcccaaaaatcccattttccttcaattcactccccaaattagtttaca 16829299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 16837868 - 16837821
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| |||||||||||  |||||||||||||| ||||||||    
T  16837868 tcccaaaaatcccattttccttcaattcactccccaaattagtttaca 16837821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 21150891 - 21150844
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| |||||| |||||  ||||||||||||||||||||||    
T  21150891 tcccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 21150844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 38743821 - 38743888
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaa 240  Q
    ||||||||||||  ||||||||||| ||||||| || |||| ||||| | |||||| |||||||||||    
T  38743821 aaacctgttaaactcaaaatcagaaatcaataaatacactattgaagtaaacctcatccttaccttaa 38743888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 48774022 - 48773967
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaa 56  Q
    ||||||||||| |||||| ||||| ||||||||||||||  ||||||| |||||||    
T  48774022 tcccaaaaatcccatttttcttccattcactccccaaattggtttacagatgtaaa 48773967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 244
Target Start/End: Complemental strand, 54832448 - 54832381
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattca 244  Q
    ||||||||  ||||||||||||| || | ||| |||| ||||| | ||||||||||||||||||||||    
T  54832448 ctgttaaacacaaaatcagaatttaaaatctacactattgaagtaaacctcacccttaccttaattca 54832381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 891767 - 891705
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||  |||||||||||||||||||||| | |  ||||| | |||||||||||||||||    
T  891767 ctgttaaacacaaaatcagaattcaataactacattcttgaagtaaacctcacccttacctta 891705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 16349383 - 16349425
Alignment:
Q  6 aaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||||||||| |  |||||||||||||||||||||||    
T  16349383 aaaatctcattttcctccaattcactccccaaatcagtttaca 16349425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 16410430 - 16410472
Alignment:
Q  6 aaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||||||||| |  |||||||||||||||||||||||    
T  16410430 aaaatctcattttcctccaattcactccccaaatcagtttaca 16410472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 21352932 - 21352978
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||| |||||| |||||  ||||||||||||||||||||||    
T  21352932 cccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 21352978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 28759615 - 28759661
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||| |||||| |||||  ||||||||||||||||||||||    
T  28759615 cccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 28759661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 47121893 - 47121939
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||| |||||| |||||  ||||||||||||||||||||||    
T  47121893 cccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 47121939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 47129261 - 47129307
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||| |||||| |||||  ||||||||||||||||||||||    
T  47129261 cccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 47129307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 240
Target Start/End: Original strand, 49164108 - 49164142
Alignment:
Q  206 ctatactactgaagcagacctcacccttaccttaa 240  Q
    |||||||||||||||| ||||||||||||||||||    
T  49164108 ctatactactgaagcaaacctcacccttaccttaa 49164142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 50142172 - 50142126
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||| |||||| |||||  ||||||||||||||||||||||    
T  50142172 cccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 50142126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 51246491 - 51246537
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||| |||||| |||||  ||||||||||||||||||||||    
T  51246491 cccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 51246537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 51477602 - 51477648
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||| |||||| |||||  ||||||||||||||||||||||    
T  51477602 cccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 51477648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 2498286 - 2498213
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||||||  |||||||||| || || | ||| |||| ||||| | ||||||||||||||||| ||||||    
T  2498286 aaacctgttaaactcaaaatcagactttaaaatctacactattgaagtaaacctcacccttaccttagttcaga 2498213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 16382138 - 16382057
Alignment:
Q  158 tcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||  |||||||||||||||  |||||||||||||||  | |||||| | ||  | | |||||||||||||||||    
T  16382138 tcccaattctcacataaacctgttaaaaacaaaatcagaattcagaacctatacaattgcggtaaacctcacccttacctta 16382057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 16837721 - 16837640
Alignment:
Q  158 tcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||  |||||||||||||||  |||||||||||||||  | |||||| | ||  | | |||||||||||||||||    
T  16837721 tcccaattctcacataaacctgttaaaaacaaaatcagaattcagaacctatacaattgcggtaaacctcacccttacctta 16837640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 28759776 - 28759849
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||||||  |||||||||| || ||   |||||||| ||||| | ||| ||||||||||||||||||||    
T  28759776 aaacctgttaaactcaaaatcagactttaaattctatactattgaagtaaaccccacccttaccttaattcaga 28759849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 32387420 - 32387375
Alignment:
Q  3 ccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||||||||||| |  |||||||||||||| ||||||||    
T  32387420 ccaaaaatctcattttcctccaattcactccccaaattagtttaca 32387375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 46070354 - 46070281
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||||||  | || ||||||||  ||| |||||||||||||| | | ||||| ||||||||||||||||    
T  46070354 aaacctgttaaactccaattcagaatttcatatctatactactgaagtaaaactcactcttaccttaattcaga 46070281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 109; Significance: 6e-55; HSPs: 7)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 56153 - 55908
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaat 100  Q
    ||||||||||| |||||||||    ||||||||||||||  ||||||| ||||| ||||||||||||| | ||||||||||||| ||||||||||  ||     
T  56153 tcccaaaaatcccattttcctcaaattcactccccaaattggtttacagatgtagaactaagtactgtatgcaaccagaacctatttctaacatcgaaac 56054  T
Q  101 agcaatttctatactcaattcactcaaaaacccataat-tcaccataaacccgaaaattcccaa-ttctatcataaacctgttaaatccaaaatcagaat 198  Q
    |||||| |||| ||||||||||| ||||||||||| ||  || |||||||||  |||||||||| ||||| ||  ||| |||||||  ||||||||||||    
T  56053 agcaatctctacactcaattcacccaaaaacccattatcccatcataaaccc--aaattcccaatttctaacaataacttgttaaaatcaaaatcagaat 55956  T
Q  199 tcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  55955 tcaataactatactactgaagcaaacctcacccttaccttaattcaga 55908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 26 - 246
Target Start/End: Original strand, 154956 - 155177
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    ||||||||||||||||||||||| |||| |||  || |||||| | ||  ||||||||| ||||||||||  ||||||||| |||| |||||| |||| |    
T  154956 ttcactccccaaatcagtttacagatgtgaaatgaaatactgtatccactcagaacctatttctaacatcgaaatagcaatctctacactcaaatcaccc 155055  T
Q  126 aaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgtt-aaatccaaaatcagaattcaataactatactactgaagcagac 224  Q
    ||||||| | |||||| ||||||| | ||||||||||||||||| ||||||||||| |||||  ||||||||||| |  | ||| |||||||||| | ||    
T  155056 aaaaacctagaattcaacataaactccaaaattcccaattctattataaacctgttaaaatcagaaatcagaattaagcatctacactactgaagtaaac 155155  T
Q  225 ctcacccttaccttaattcaga 246  Q
    |||||||||||||||| |||||    
T  155156 ctcacccttaccttaaatcaga 155177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 246
Target Start/End: Original strand, 147769 - 147990
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    ||||||||||||||||||||||| |||| |||  || |||||| | ||  ||||||||| ||||||||||  || |||||| |||| |||||| |||| |    
T  147769 ttcactccccaaatcagtttacagatgtgaaatgaaatactgtatgcactcagaacctatttctaacatcgaaacagcaatctctacactcaaatcaccc 147868  T
Q  126 aaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgtt-aaatccaaaatcagaattcaataactatactactgaagcagac 224  Q
    ||||||| | |||||| ||||||| | ||||||||||||||||| |||||||| || |||||  ||||||||||| |  | ||| |||||||||| | ||    
T  147869 aaaaacctagaattcaacataaacaccaaaattcccaattctattataaaccttttaaaatcagaaatcagaattaagcatctacactactgaagtaaac 147968  T
Q  225 ctcacccttaccttaattcaga 246  Q
    |||||||||||||||| |||||    
T  147969 ctcacccttaccttaaatcaga 147990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 76 - 239
Target Start/End: Complemental strand, 187138 - 186975
Alignment:
Q  76 cagaacctaattctaacatctgaatagcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaa 175  Q
    ||||||||| |||||||||| ||| | ||||| ||| ||||||||||| |||||||| | |||||| ||||||||| |||||||||||||||  ||||||    
T  187138 cagaacctatttctaacatcagaacaacaattcctacactcaattcacccaaaaacctagaattcaacataaaccccaaaattcccaattctcacataaa 187039  T
Q  176 cctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    |||||||||  ||||||||||||| |  ||||| |||| ||||| | |||||||| ||||||||    
T  187038 cctgttaaaatcaaaatcagaatttatcaactacactattgaagtaaacctcaccattacctta 186975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 76 - 239
Target Start/End: Complemental strand, 196765 - 196601
Alignment:
Q  76 cagaacctaattctaacatctgaatagcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaa 175  Q
    ||||||||| |||||||||| ||| | ||||| ||| ||||||||||| |||||||| | |||||| ||||||||| |||||||||||||||  ||||||    
T  196765 cagaacctatttctaacatcagaacaacaattcctacactcaattcacccaaaaacctagaattcaacataaaccccaaaattcccaattctcacataaa 196666  T
Q  176 cctgtt-aaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    |||||| |||  ||||||||||||| |  ||||| |||| ||||| | |||||||||||||||||    
T  196665 cctgttaaaaatcaaaatcagaatttatcaactacactattgaagtaaacctcacccttacctta 196601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 125 - 239
Target Start/End: Original strand, 252748 - 252861
Alignment:
Q  125 caaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagac 224  Q
    ||||| || |||||||||||||||||  |||||||||||||||| || ||||||||||||  ||||||||||||| |  | ||| |||| ||||| | ||    
T  252748 caaaatccaataattcaccataaacct-aaaattcccaattctaacacaaacctgttaaaatcaaaatcagaattaaccatctacactattgaagtaaac 252846  T
Q  225 ctcacccttacctta 239  Q
    |||||||||||||||    
T  252847 ctcacccttacctta 252861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 125 - 239
Target Start/End: Original strand, 259354 - 259467
Alignment:
Q  125 caaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagac 224  Q
    ||||| || |||||||||||||||||  |||||||||||||||| || ||||||||||||  ||||||||||||| |  | ||| |||| ||||| | ||    
T  259354 caaaatccaataattcaccataaacct-aaaattcccaattctaacacaaacctgttaaaatcaaaatcagaattaaccatctacactattgaagtaaac 259452  T
Q  225 ctcacccttacctta 239  Q
    |||||||||||||||    
T  259453 ctcacccttacctta 259467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 108; Significance: 2e-54; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 26 - 243
Target Start/End: Original strand, 18272090 - 18272306
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    |||||||||||||| |||||||| |||||||||||||| |||| | ||||||||||||| ||||||||||  || |||||| |||| |||||||||||||    
T  18272090 ttcactccccaaattagtttacagatgtaaaactaagtgctgtatgcaaccagaacctatttctaacatcaaaacagcaatctctacactcaattcactc 18272189  T
Q  126 aaaaaccc-ataattcaccataaacccgaaaattcccaa-ttctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcaga 223  Q
    |||||||| ||||| || ||||||||| ||||| ||||| ||||| ||| ||| |||||||| |||||||||||||||||| |||||||||||||||| |    
T  18272190 aaaaacccaataatacaacataaaccc-aaaatccccaatttctaccat-aacttgttaaat-caaaatcagaattcaatatctatactactgaagcaaa 18272286  T
Q  224 cctcacccttaccttaattc 243  Q
    ||||||||||||||||||||    
T  18272287 cctcacccttaccttaattc 18272306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 17177145 - 17177390
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaat 100  Q
    |||||||||| |||||||||| |  |||||||||||||| |||||||| ||   |||  |  | |||| | ||  ||||||||| ||| ||||||  ||     
T  17177145 tcccaaaaatttcattttcctccaattcactccccaaattagtttacagatacgaaataacttgctgtatgcactcagaacctatttcaaacatcaaaac 17177244  T
Q  101 agcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattc 200  Q
    |||||| |||| |||||| |||| |||||||| | |||||| ||||||||| ||||||| ||||||||||||||||||||||||  ||||||||||||||    
T  17177245 agcaatctctacactcaaatcacccaaaaacctagaattcaacataaaccccaaaattctcaattctatcataaacctgttaaaatcaaaatcagaattc 17177344  T
Q  201 aataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
     | ||||||| |||||||||| ||||||||||||||||||||||||    
T  17177345 tacaactatattactgaagcaaacctcacccttaccttaattcaga 17177390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 26 - 246
Target Start/End: Complemental strand, 10783635 - 10783424
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaa-ctaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcact 124  Q
    ||||||||||||||||||||||| |||||||| |||| |  ||| ||||  ||||||||| ||||||||||  || | |||| ||||         ||||    
T  10783635 ttcactccccaaatcagtttacagatgtaaaaactaaatgatgtatacactcagaacctatttctaacatcaaaacaacaatctcta---------cact 10783545  T
Q  125 caaaaacccataattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcaga 223  Q
    ||||| || |||||||| ||||||||| | ||| ||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |    
T  10783544 caaaacccaataattcatcataaaccc-ataatccccaatttctaccataaacctgttaaa-ccaaaatcagaattcaataactatactactgaagcaaa 10783447  T
Q  224 cctcacccttaccttaattcaga 246  Q
    |||||||||||||||||||||||    
T  10783446 cctcacccttaccttaattcaga 10783424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 16485446 - 16485691
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaat 100  Q
    ||||||||||| || ||||||    ||||||||||||||||||||||| || | ||||||| |  ||| | ||||||||||||||||||||||||  ||     
T  16485446 tcccaaaaatcccaatttcctcaatttcactccccaaatcagtttacagatatgaaactaaatgttgtatgcaaccagaacctaattctaacatcaaaac 16485545  T
Q  101 agcaatttctatactcaattcactcaaaaaccc-ataattcaccataaacccgaaaattcccaa-ttctatcataaacctgttaaatccaaaatcagaat 198  Q
    || ||| |||| |||||||||||||| |||||| ||||| || |||||| || ||||| ||||| ||||| |||||| ||||||||| ||||||||||||    
T  16485546 agaaatctctacactcaattcactcagaaacccaataatccaacataaatcc-aaaatccccaatttctaccataaatctgttaaat-caaaatcagaat 16485643  T
Q  199 tcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    |  | | ||||||| |||||||| |  |||||||||||||||||||||    
T  16485644 tagacatctatactgctgaagcaaatatcacccttaccttaattcaga 16485691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 121 - 246
Target Start/End: Complemental strand, 10972199 - 10972075
Alignment:
Q  121 cactcaaaaacccataattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaag 219  Q
    ||||||||| || |||||||| ||||||||| | ||| ||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10972199 cactcaaaacccaataattcatcataaaccc-ataatccccaatttctaccataaacctgttaaa-ccaaaatcagaattcaataactatactactgaag 10972102  T
Q  220 cagacctcacccttaccttaattcaga 246  Q
    || ||||||||||||||||||||||||    
T  10972101 caaacctcacccttaccttaattcaga 10972075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 26 - 246
Target Start/End: Complemental strand, 18165636 - 18165426
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    |||||||||||||| |||||||| ||| |||||||||| |||| | ||||||||||||||||||||||||  || | |||| ||||         ||| |    
T  18165636 ttcactccccaaattagtttacagatgcaaaactaagtgctgtatgcaaccagaacctaattctaacatcaaaacaacaatctcta---------caccc 18165546  T
Q  126 aaaaacccataattcaccataaacccgaaaattcccaattc-tatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagac 224  Q
    |||   | |||||||| ||||||||  |||||||||||||| || || |||| ||||||| ||||||||||||||||||||||| |||| ||||||| ||    
T  18165545 aaacctcaataattcatcataaacct-aaaattcccaattcctacca-aaacttgttaaacccaaaatcagaattcaataactacactattgaagcaaac 18165448  T
Q  225 ctcacccttaccttaattcaga 246  Q
    ||||||||||||||||| ||||    
T  18165447 ctcacccttaccttaatccaga 18165426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 246
Target Start/End: Complemental strand, 53904717 - 53904486
Alignment:
Q  5 aaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagca 104  Q
    ||||||| |||||||||    |||||||||||||| |||||||| ||| |||||||||| || | | |||||||||||||||||||||||| ||| | ||    
T  53904717 aaaaatcccattttcctcaaattcactccccaaattagtttacagatgcaaaactaagtgctatatgcaaccagaacctaattctaacatcagaacaaca 53904618  T
Q  105 atttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattcaat 203  Q
    || ||||         ||| |||||  | |||||||| ||  ||||  ||||| ||||||| ||| || || | ||||||| ||||||||||||||||||    
T  53904617 atctcta---------cacccaaaactcaataattcatcaataacct-aaaatccccaatttctaccaaaagcttgttaaa-ccaaaatcagaattcaat 53904529  T
Q  204 aactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||| |||| ||||||| ||||||||||||||||||||||||    
T  53904528 aactacactattgaagcaaacctcacccttaccttaattcaga 53904486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 246
Target Start/End: Complemental strand, 16228494 - 16228260
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaata 101  Q
    |||||||||| ||||||||| |  |||||||||||||| |||||||| ||| ||||||||||  ||| | |||||||||||||||||||||||| |||      
T  16228494 cccaaaaatcccattttcctccaattcactccccaaattagtttacagatgcaaaactaagtgttgtatgcaaccagaacctaattctaacatcagaacc 16228395  T
Q  102 gcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaa-ttctatcataaacctgttaaatccaaaatcagaattc 200  Q
     |||| ||||         ||| |||||  | |||||| | |||||| || ||||| ||||| ||||| || || | ||||||| ||||||||||||||     
T  16228394 acaatctcta---------cacccaaaactcaataatttatcataaa-cctaaaatccccaatttctaccaaaagcttgttaaa-ccaaaatcagaattt 16228306  T
Q  201 aataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    |||||||| |||| ||||||| |||||||||||||||||| |||||    
T  16228305 aataactacactattgaagcaaacctcacccttaccttaaatcaga 16228260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 127 - 244
Target Start/End: Original strand, 13454645 - 13454762
Alignment:
Q  127 aaaacccat-aattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacc 225  Q
    ||||||||| |||||| ||||||||| ||  |||||||||  |||||||||||||||||  ||||| |||||| ||||| |||||||||||||| | | |    
T  13454645 aaaacccattaattcatcataaaccc-aattttcccaatttcatcataaacctgttaaaatcaaaaccagaatccaatatctatactactgaagtaaaac 13454743  T
Q  226 tcacccttaccttaattca 244  Q
    |||||||||||||||||||    
T  13454744 tcacccttaccttaattca 13454762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 113 - 246
Target Start/End: Complemental strand, 14991897 - 14991765
Alignment:
Q  113 actcaattcactcaaaaacccataattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattcaataactatac 211  Q
    ||||||||||| |||||||| | |||||| | ||||||| ||||| || |||| | | ||||||||||||||||| |||||||||||| || | ||| ||    
T  14991897 actcaattcacccaaaaaccaagaattcaacttaaaccc-aaaatccctaatttcaaccataaacctgttaaatc-aaaatcagaattaaacatctacac 14991800  T
Q  212 tactgaagcagacctcacccttaccttaattcaga 246  Q
    |||||||||| |||||||||||||||||| |||||    
T  14991799 tactgaagcaaacctcacccttaccttaaatcaga 14991765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 113 - 246
Target Start/End: Original strand, 30239934 - 30240066
Alignment:
Q  113 actcaattcactcaaaaacccataattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattcaataactatac 211  Q
    ||||||||||| |||||||| | |||||| | ||||||| ||||| ||||||| ||| ||||||||||||||| |||||||||||||| || | ||| ||    
T  30239934 actcaattcacccaaaaaccaagaattcaacttaaaccc-aaaatccccaatttctaccataaacctgttaaa-ccaaaatcagaattgaaaatctacac 30240031  T
Q  212 tactgaagcagacctcacccttaccttaattcaga 246  Q
    ||| |||| | |||||| |||||||||||||||||    
T  30240032 taccgaagtaaacctcatccttaccttaattcaga 30240066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 33222220 - 33222289
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||  |||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||    
T  33222220 ctgttaaacacaaaatcagaattcaatgtctatactactgaagcaaacctcacccttaccttaattcaga 33222289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 14555347 - 14555257
Alignment:
Q  108 tctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaatt 199  Q
    |||| ||||||||||||||||| |||| ||| || ||||||||| |||||||||||||||  |||||||||||||||  |||||||||||||    
T  14555347 tctacactcaattcactcaaaa-cccaaaatccaacataaaccccaaaattcccaattctcacataaacctgttaaaatcaaaatcagaatt 14555257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 49051919 - 49051990
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattca 244  Q
    ||||||||||||  |||||||||||||||||| |||||||||||||| | | ||||||||||||||||||||    
T  49051919 aaacctgttaaactcaaaatcagaattcaatacctatactactgaagtaaaactcacccttaccttaattca 49051990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 7360120 - 7360193
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||||||  ||||||||||| |||||||||| |||| ||||| | ||||||||||||||||||||||||    
T  7360120 aaacctgttaaactcaaaatcagaaatcaataactacactattgaagtaaacctcacccttaccttaattcaga 7360193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 178 - 246
Target Start/End: Original strand, 16157782 - 16157851
Alignment:
Q  178 tgttaaatc-caaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||| |||| |||||||||||||||| | ||||||||||| ||||||||||||||||||||||||    
T  16157782 tgttaaatcacaaattcagaattcaataactgttctactgaagcaaacctcacccttaccttaattcaga 16157851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 14063640 - 14063744
Alignment:
Q  135 taattcaccataaacccgaaaattcccaatt--ctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcaccct 232  Q
    ||||||| ||||||||  |||||||||||||  ||| || |||| |||||||  |||||||||||||||||| |||||||| ||||||| ||||||||||    
T  14063640 taattcaacataaacct-aaaattcccaattttctacca-aaacgtgttaaactcaaaatcagaattcaatatctatactaatgaagcaaacctcaccct 14063737  T
Q  233 tacctta 239  Q
    |||||||    
T  14063738 tacctta 14063744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 113 - 246
Target Start/End: Complemental strand, 15004405 - 15004273
Alignment:
Q  113 actcaattcactcaaaaacccataattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattcaataactatac 211  Q
    ||||||||||| || ||||| | |||||| | ||||||| ||||| || |||| | | ||||||||||||||||| |||||||||||| || | ||| |     
T  15004405 actcaattcacccacaaaccaagaattcaacttaaaccc-aaaatccctaatttcaaccataaacctgttaaatc-aaaatcagaattaaacatctacag 15004308  T
Q  212 tactgaagcagacctcacccttaccttaattcaga 246  Q
    |||||||||| |||||||||||||||||| |||||    
T  15004307 tactgaagcaaacctcacccttaccttaaatcaga 15004273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 173 - 239
Target Start/End: Original strand, 21882465 - 21882531
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||||  ||||||||||| | |||| |||||||||||||||| |||||||||||||||||    
T  21882465 aaacctgttaaactcaaaatcagaaattaatagctatactactgaagcaaacctcacccttacctta 21882531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 246
Target Start/End: Complemental strand, 15360197 - 15359964
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaata 101  Q
    |||||||||| |||||||||    |||||||||||||| |||||||| ||| ||||||||||  ||| | |||| |  |||||||||||||||| ||| |    
T  15360197 cccaaaaatcccattttcctgaaattcactccccaaattagtttacagatgcaaaactaagtgttgtatgcaactaagacctaattctaacatcagaaca 15360098  T
Q  102 gcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattca 201  Q
     |||| |||         |||| ||||| || |||||||| ||||||||   | || || |||||   || ||||  |||||| | ||||||| ||||||    
T  15360097 acaatctct---------tcacccaaaacccaataattcatcataaacct--agatcccaaattcctacaaaaactagttaaacctaaaatcataattca 15360009  T
Q  202 ataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||| |||||||||||||||| |||||| ||||||||||| |||||    
T  15360008 atatctatactactgaagcaaacctcatccttaccttaactcaga 15359964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 30396886 - 30396947
Alignment:
Q  27 tcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattc 88  Q
    ||||||||||||| |||| ||| ||||||||||||||  |||||||||||||||||||||||    
T  30396886 tcactccccaaattagttaacagatgtaaaactaagtgatgtctacaaccagaacctaattc 30396947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 1584782 - 1584849
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaa 240  Q
    ||||||||||||  ||||||||||| |||||||||| |||| ||||| | ||||||||||||||||||    
T  1584782 aaacctgttaaactcaaaatcagaaatcaataactacactattgaagtaaacctcacccttaccttaa 1584849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 95
Target Start/End: Complemental strand, 41528434 - 41528367
Alignment:
Q  28 cactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    ||||||||||||||||||||| |||  |||||||||  ||| | ||||||||||||||||||||||||    
T  41528434 cactccccaaatcagtttacagatgctaaactaagtgttgtatgcaaccagaacctaattctaacatc 41528367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 900449 - 900535
Alignment:
Q  155 aattcccaattct-atcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaa 240  Q
    ||||||||||||| | || ||||||||||||  |||||||| |||| || | |||||||||||||| | ||||||||||||||||||    
T  900449 aattcccaattctcaccaaaaacctgttaaactcaaaatcataatttaaaatctatactactgaagtaaacctcacccttaccttaa 900535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 154 - 239
Target Start/End: Original strand, 37882350 - 37882435
Alignment:
Q  154 aaattcccaattctatcataaa-cctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||||| | |||||| |||||||||  ||||||||||||| || | |||||||||||||||| |||||||| ||||||||    
T  37882350 aaattcccaattcgaacataaaacctgttaaactcaaaatcagaatt-aacatctatactactgaagcaaacctcaccattacctta 37882435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 46044230 - 46044169
Alignment:
Q  34 ccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    |||||| |||| ||| ||||||||||||||  || |||||||||||||||||||||||||||    
T  46044230 ccaaatgagttaacagatgtaaaactaagtgatgcctacaaccagaacctaattctaacatc 46044169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 52501423 - 52501496
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||||||| ||||||||| ||| |||||||| | |  ||||| | ||||||||||||||||||||||||    
T  52501423 aaacctgttaaatacaaaatcaggatttaataactacattcttgaagtaaacctcacccttaccttaattcaga 52501496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 45141915 - 45141863
Alignment:
Q  4 caaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaa 56  Q
    |||||||| |||||| ||||| ||||||||||||||||||||||| |||||||    
T  45141915 caaaaatcccatttttcttccattcactccccaaatcagtttacagatgtaaa 45141863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 3265990 - 3265943
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  3265990 tcccaaaaatcccattttccttccaatcactccccaaatcagtttaca 3265943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 240
Target Start/End: Original strand, 30397027 - 30397090
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaa 240  Q
    ||||||||  ||||||||||| | || | |||||||||||||||| ||||||||||||||||||    
T  30397027 ctgttaaactcaaaatcagaaattaacatctatactactgaagcaaacctcacccttaccttaa 30397090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 42221304 - 42221371
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaa 240  Q
    |||| |||||||  ||||||||||| | || | |||||||||||||||| ||||||||||||||||||    
T  42221304 aaacttgttaaactcaaaatcagaaattaacatctatactactgaagcaaacctcacccttaccttaa 42221371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 43284274 - 43284227
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||||    
T  43284274 tcccaaaaatctcattttcctccaattcactccccaaatcagtttaca 43284227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 52501261 - 52501308
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||||||||||| |||||  ||||||||||||||||||||||    
T  52501261 tcccaaaaatctcatttttcttccaatcactccccaaatcagtttaca 52501308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 239
Target Start/End: Original strand, 392040 - 392106
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||||| | ||||||||||| |||||||| |||  ||||| | |||||||||||||||||    
T  392040 aaacctgttaaatacgaaatcagaatttaataactacactcttgaagtaaacctcacccttacctta 392106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 3259362 - 3259268
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    |||||||||||||||||| |||||  ||||||||||||| |||||||| ||  | || |||||  | | | ||||||||| ||||||||||||||    
T  3259362 tcccaaaaatctcatttttcttccaatcactccccaaattagtttacagatacataattaagtgttctgtgcaaccagaaactaattctaacatc 3259268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 29448045 - 29447999
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||| ||||||||||||  ||||||||||||||||||||||    
T  29448045 cccaaaaatcccattttccttccaatcactccccaaatcagtttaca 29447999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 33097972 - 33098034
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||  ||||||||||| | || | |||||||||||||||| |||||||||||||||||    
T  33097972 ctgttaaactcaaaatcagaaattaacatctatactactgaagcaaacctcacccttacctta 33098034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 239
Target Start/End: Complemental strand, 37622515 - 37622449
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||||  ||||||||||| ||| |||||| |||| ||||| | |||||||||||||||||    
T  37622515 aaacctgttaaactcaaaatcagaaatcagtaactacactattgaagtaaacctcacccttacctta 37622449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 47870431 - 47870337
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    |||| ||||||  ||||| ||||| ||||||||||||||||||||||| |||||||   |  |||||| ||||  ||||||||| ||||||||||    
T  47870431 tccccaaaatccaatttttcttccattcactccccaaatcagtttacagatgtaaattaacttactgtatacactcagaacctatttctaacatc 47870337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 3259200 - 3259127
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||||||  |||||||||| || |||| ||| | |||||| | | ||||||||||||||||||||||||    
T  3259200 aaacctgttaaactcaaaatcagacttaaatagctacaatactgaggtaaacctcacccttaccttaattcaga 3259127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 5939803 - 5939872
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||| |||| |||||| | | |||||| |||| ||||| | ||||||||||||||||||||||||    
T  5939803 ctgttaaattcaaattcagaaattagtaactacactattgaagtaaacctcacccttaccttaattcaga 5939872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 246
Target Start/End: Complemental strand, 19127533 - 19127476
Alignment:
Q  189 aaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||| | |||  |||||||||||||| | ||||||||||||||||||||||||    
T  19127533 aaatcagaaattaatgtctatactactgaagtaaacctcacccttaccttaattcaga 19127476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 23724023 - 23723942
Alignment:
Q  158 tcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||| |||||||||||||||  |||||||||||||||  | |||||| | ||  | | |||||||||||||||||    
T  23724023 tcccaattctaacataaacctgttaaaaacaaaatcagaattcagaacctatacaattgcggtaaacctcacccttacctta 23723942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 29381968 - 29381899
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||  ||||||||||||| |||||||| | || ||||| | |||||| |||||||||||||||||    
T  29381968 ctgttaaacacaaaatcagaatttaataactacattattgaagtaaacctcatccttaccttaattcaga 29381899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 43284126 - 43284045
Alignment:
Q  158 tcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    |||||||||| ||||||||||||||||  ||||||||||||| |  | |||||| | || || | |||||||||||||||||    
T  43284126 tcccaattctctcataaacctgttaaaaacaaaatcagaatttagaacctatacaattgcagtaaacctcacccttacctta 43284045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 44657138 - 44657089
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttacatat 51  Q
    |||||||||| |||||| |||||  |||||||||||||||||||||||||    
T  44657138 cccaaaaatcccatttttcttccaatcactccccaaatcagtttacatat 44657089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 100
Target Start/End: Original strand, 14063543 - 14063615
Alignment:
Q  28 cactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaat 100  Q
    ||||||||||||||||||||| ||   ||||||| |  ||| | |||||||||||||||||||||||| ||||    
T  14063543 cactccccaaatcagtttacagatactaaactaaatgttgtatgcaaccagaacctaattctaacatcagaat 14063615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 13480378 - 13480331
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||||||||||||| |  |||||||||||||| ||||||||    
T  13480378 tcccaaaaatctcattttcctccaattcactccccaaattagtttaca 13480331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 239
Target Start/End: Original strand, 14487544 - 14487623
Alignment:
Q  160 ccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    |||||||| ||||||||||||||||  |||||||||||||||  | |||||| | ||  | | |||||||||||||||||    
T  14487544 ccaattctctcataaacctgttaaaatcaaaatcagaattcagaacctatacaattgcggtaaacctcacccttacctta 14487623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 236
Target Start/End: Original strand, 15325836 - 15325899
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacc 236  Q
    |||||| |||||  |||||||||||||||  | |||||||| ||||||| ||||||||||||||    
T  15325836 aaacctattaaactcaaaatcagaattcagaatctatactaatgaagcaaacctcacccttacc 15325899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 21397527 - 21397574
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| |||||| |||||  ||||||||||||||||||||||    
T  21397527 tcccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 21397574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 23122406 - 23122453
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| ||||||||| |  |||||||||||||||||||||||    
T  23122406 tcccaaaaatcccattttcctccaattcactccccaaatcagtttaca 23122453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 23724170 - 23724123
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| ||||||||| |  |||||||||||||||||||||||    
T  23724170 tcccaaaaatcccattttcctccaattcactccccaaatcagtttaca 23724123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 45959113 - 45959058
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaa 56  Q
    ||||||||||| |||||| |||||  ||||||||||||| |||||||| |||||||    
T  45959113 tcccaaaaatcccatttttcttccaatcactccccaaattagtttacagatgtaaa 45959058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 50082931 - 50082978
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| || |||||||||  ||||||||||||||||||||||    
T  50082931 tcccaaaaatcccagtttccttccaatcactccccaaatcagtttaca 50082978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 391879 - 391925
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||| |||||| |||||  ||||||||||||||||||||||    
T  391879 cccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 391925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 26396400 - 26396446
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||| |||||| |||||  ||||||||||||||||||||||    
T  26396400 cccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 26396446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 29382134 - 29382088
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||| |||||| |||||  ||||||||||||||||||||||    
T  29382134 cccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 29382088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 29454729 - 29454683
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||| |||||| |||||  ||||||||||||||||||||||    
T  29454729 cccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 29454683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 37882208 - 37882246
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaat 39  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  37882208 tcccaaaaatctcattttccttcaattcactccccaaat 37882246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 199
Target Start/End: Complemental strand, 11170470 - 11170429
Alignment:
Q  158 tcccaattctatcataaacctgttaaatccaaaatcagaatt 199  Q
    |||||||||| ||||||||||||||||  |||||||||||||    
T  11170470 tcccaattctctcataaacctgttaaaatcaaaatcagaatt 11170429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 95
Target Start/End: Original strand, 15325699 - 15325768
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    ||||||||||||||||||||||| || | ||||||| |  ||| | ||||||||||||| ||||| ||||    
T  15325699 ttcactccccaaatcagtttacagatatgaaactaaatgatgtatgcaaccagaacctatttctatcatc 15325768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 95
Target Start/End: Original strand, 49051784 - 49051853
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    ||||||||||||||  ||||||| ||  | ||||||||||| | | ||||||||| ||||||||||||||    
T  49051784 ttcactccccaaattggtttacagatacagaactaagtactatatgcaaccagaaactaattctaacatc 49051853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 11937883 - 11937939
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaa 57  Q
    |||| |||||| |||||| |||||  |||||||||||||||||||||| ||| ||||    
T  11937883 tccccaaaatcccatttttcttccaatcactccccaaatcagtttacagatgcaaaa 11937939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 26076970 - 26076910
Alignment:
Q  179 gttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    |||||| |||||||||||||| |  | |||||||| |||| || |||||||||||||||||    
T  26076970 gttaaacccaaaatcagaatttagaatctatactaatgaaccaaacctcacccttacctta 26076910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 33222053 - 33222105
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgt 53  Q
    |||| |||||| |||||| ||||  ||||||||||||||||||||||| ||||    
T  33222053 tcccgaaaatcccatttttcttcaattcactccccaaatcagtttacagatgt 33222105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 26 - 246
Target Start/End: Original strand, 28064 - 28285
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    ||||||||||||||||||||| | || | ||||||| |  ||| | ||||||||||||| ||||||||||  || |||||| |||| |||||| ||||||    
T  28064 ttcactccccaaatcagtttatagatatgaaactaaatgttgtatgcaaccagaacctatttctaacatcaaaacagcaatctctacactcaaatcactc 28163  T
Q  126 aaaaaccca-taattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcaga 223  Q
    ||||||||| |||| || ||||||||| ||||| ||||||| ||| ||  ||||||||||||| |||||||||||||||||||||||||||||||||| |    
T  28164 aaaaacccaataatccaacataaaccc-aaaatccccaatttctaccaataacctgttaaatcaaaaatcagaattcaataactatactactgaagcaaa 28262  T
Q  224 cctcacccttaccttaattcaga 246  Q
    |||||||||||||||||||||||    
T  28263 cctcacccttaccttaattcaga 28285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1290 (Bit Score: 102; Significance: 9e-51; HSPs: 1)
Name: scaffold1290
Description:

Target: scaffold1290; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 26 - 246
Target Start/End: Complemental strand, 621 - 401
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    ||||||||||||||||||||||| || | ||||||| |  ||| | ||||||||||||| ||||||||||  || || |||| ||| ||||||||||| |    
T  621 ttcactccccaaatcagtttacagatatgaaactaaatgttgtatgcaaccagaacctatttctaacatcaaaacagtaattcctacactcaattcaccc 522  T
Q  126 aaaaacccataattcaccataaacccgaaaattcccaa-ttctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagac 224  Q
    ||||||| | |||||| | ||||||| ||||||||||| ||||| ||||||||||||||| |||||||||||||| || | |||||||||||||||| ||    
T  521 aaaaaccaagaattcaacttaaaccccaaaattcccaatttctaccataaacctgttaaa-ccaaaatcagaattaaacatctatactactgaagcaaac 423  T
Q  225 ctcacccttaccttaattcaga 246  Q
    ||||||||||||||||||||||    
T  422 ctcacccttaccttaattcaga 401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 4e-50; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 26 - 246
Target Start/End: Complemental strand, 5289292 - 5289072
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    |||||||||||||| |||||||| | | || | |||||||| | | ||||||||||||||||||| |||  ||| | ||||||||| |||||||||||||    
T  5289292 ttcactccccaaattagtttacagaagcaagaataagtactatatgcaaccagaacctaattctaccattagaacatcaatttctacactcaattcactc 5289193  T
Q  126 aaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacc 225  Q
    || ||  |||||| || ||||||||| | ||| || |||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||| || | |    
T  5289192 aagaaaacataatccaacataaaccccagaatccctaattctatcataaacctgttaaatccaaaatccgaattcaataagtatattactgaaacaaatc 5289093  T
Q  226 tcacccttaccttaattcaga 246  Q
    |||||||||||||||||||||    
T  5289092 tcacccttaccttaattcaga 5289072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 22797896 - 22797651
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaat 100  Q
    ||||||||||| || ||||||    ||||||||||||||||||||||| |||||||||||| | |||| | ||||||||||||| ||||||||||  |||    
T  22797896 tcccaaaaatcccaatttcctcaatttcactccccaaatcagtttacagatgtaaaactaaatgctgtatgcaaccagaacctatttctaacatcaaaat 22797797  T
Q  101 agcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaa-ttctatcataaacctgttaaatccaaaatcagaatt 199  Q
    || |||| ||| | ||||||||| |||||||| | |||||| | ||||||| || |||||||| ||||| ||||||| ||||||| | ||||||||||||    
T  22797796 agtaattcctacattcaattcacccaaaaaccaagaattcaacttaaaccccaacattcccaatttctaccataaacttgttaaa-cgaaaatcagaatt 22797698  T
Q  200 caataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
     || | ||| |||||||||| | ||||||||||||||||||||||||    
T  22797697 aaacatctacactactgaagtaaacctcacccttaccttaattcaga 22797651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 23020753 - 23020520
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaat 100  Q
    |||||||||||||||||| ||||  |||||||||||||| |||||||| ||| |||||||||| ||||||||||||||||||||||||||||||| |||     
T  23020753 tcccaaaaatctcatttttcttcaattcactccccaaattagtttacagatgcaaaactaagtgctgtctacaaccagaacctaattctaacatcagaac 23020654  T
Q  101 agcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattc 200  Q
    | ||||||| | ||||  |  |||||| |      | |||| |||||  || |||||||||||||||| |||||  ||||||||| ||||||||||| |     
T  23020653 atcaatttc-acactc--taaactcaaca------atttcatcataa--cccaaaattcccaattctaccataactctgttaaat-caaaatcagaactt 23020566  T
Q  201 aataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    |  | |||||||||||||||| ||||||||||||||||||||||||    
T  23020565 agaatctatactactgaagcaaacctcacccttaccttaattcaga 23020520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 76 - 246
Target Start/End: Original strand, 19468699 - 19468869
Alignment:
Q  76 cagaacctaattctaacatctgaatagcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaa 175  Q
    ||||||||| |||||||| | ||| | |||| |||| |||||| | || |||||||| | |||||| ||||||||| |||||||||||||||| |||| |    
T  19468699 cagaacctatttctaacaccagaacaacaatctctacactcaaattacccaaaaacctagaattcaacataaaccccaaaattcccaattctaacataga 19468798  T
Q  176 cctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    |||||||||  ||||||||||||| |  ||||| |||| ||||||| ||||||||||||||||||||||||    
T  19468799 cctgttaaaatcaaaatcagaatttatcaactacactattgaagcaaacctcacccttaccttaattcaga 19468869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 28 - 246
Target Start/End: Complemental strand, 23232764 - 23232558
Alignment:
Q  28 cactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactcaa 127  Q
    ||||||||||||||||||||| |||  |||||||||  ||| | |||||||||||||||||||||||| |||   |||| ||||         ||| |||    
T  23232764 cactccccaaatcagtttacagatgataaactaagtgttgtatgcaaccagaacctaattctaacatcagaaccacaatctcta---------cacccaa 23232674  T
Q  128 aaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctc 227  Q
    ||    |||||||||||||   || ||||||||||||||||||||||||||||||||  ||||||||| ||||| |||||| |||| ||||||| |||||    
T  23232673 aacttaataattcaccata---cctaaaattcccaattctatcataaacctgttaaaatcaaaatcagcattcattaactacactattgaagcaaacctc 23232577  T
Q  228 acccttaccttaattcaga 246  Q
    |||||||||||||||||||    
T  23232576 acccttaccttaattcaga 23232558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 10463606 - 10463496
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaat 100  Q
    |||| |||||| |||||| ||||  ||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||| |||     
T  10463606 tccccaaaatcccatttttcttcttttcactccccaaatcagtttacagatgtaaaactaagtgctgtctacaaccaaaacctaattctaacatcagaac 10463507  T
Q  101 agcaatttcta 111  Q
    | |||||||||    
T  10463506 aacaatttcta 10463496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 246
Target Start/End: Complemental strand, 18315330 - 18315109
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    |||||| |||||||||||||||| ||||| |||||| |  ||| | ||| ||||||||| ||||| ||||  |  ||  ||| ||| || |||||||| |    
T  18315330 ttcacttcccaaatcagtttacagatgtataactaaatgttgtatgcaatcagaacctatttctatcatcaaaccagtgattcctacacccaattcaccc 18315231  T
Q  126 aaaaacccata--attcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcag 222  Q
     |||| ||| |  ||||| | ||||||| ||||| ||||||| ||| ||||||||||||||| |||||||||||||| || | ||||||||||||||||     
T  18315230 caaaaaccaaagaattcaacttaaaccc-aaaatccccaatttctaccataaacctgttaaa-ccaaaatcagaattaaaaatctatactactgaagcaa 18315133  T
Q  223 acctcacccttaccttaattcaga 246  Q
    ||||||||||||||||||||||||    
T  18315132 acctcacccttaccttaattcaga 18315109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 246
Target Start/End: Original strand, 24721401 - 24721633
Alignment:
Q  3 ccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatag 102  Q
    ||||||||| |||||||||    |||||||||||||| |||||||| ||| ||||||||||  ||| | |||||||||||||||| ||||||| ||| ||    
T  24721401 ccaaaaatcccattttcctcaaattcactccccaaattagtttacagatgcaaaactaagtgttgtatgcaaccagaacctaattataacatcagaacag 24721500  T
Q  103 caatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaa 202  Q
    |||| | ||         ||| |||||  | |||||||| ||  ||||  ||||| | |||||||| || || | ||||||| |||||||||||||||||    
T  24721501 caatcttta---------cacccaaaactcaataattcatcaataacct-aaaatcctcaattctaccaaaagcttgttaaa-ccaaaatcagaattcaa 24721589  T
Q  203 taactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    |||||| |||| ||||||| ||||||||||||||||||||||||    
T  24721590 taactacactattgaagcaaacctcacccttaccttaattcaga 24721633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 14615660 - 14615432
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaat 100  Q
    |||||||||||||||||||||    |||||||||||||| |||||||| |||  ||| |||||  | | | |||||||||||||||||||||||| |||     
T  14615660 tcccaaaaatctcattttcctcaaattcactccccaaattagtttacagatgctaaattaagtgttatatgcaaccagaacctaattctaacatcagaac 14615561  T
Q  101 agcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattc 200  Q
      |||  ||||         | ||||||| ||  ||||||| ||||||||  ||||||| |||||  | |  ||||||||||||  ||||||||||||||    
T  14615560 cacaacctcta---------ctctcaaaacccactaattcaacataaacct-aaaattctcaatttcaaccaaaacctgttaaactcaaaatcagaattc 14615471  T
Q  201 aataactatactactgaagcagacctcacccttacctta 239  Q
    |||| |||||||||||||||| |||||||||||||||||    
T  14615470 aatatctatactactgaagcaaacctcacccttacctta 14615432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 246
Target Start/End: Original strand, 18787033 - 18787118
Alignment:
Q  162 aattctatcataaacctgttaaatccaaaa-tcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||||||||||| |||||||||||| |||||||| || | ||| |||||||||| | ||||||||||||||||||||||||    
T  18787033 aattctatcataaacctattaaatccaaaaatcagaattaaacatctacactactgaagtaaacctcacccttaccttaattcaga 18787118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 95
Target Start/End: Original strand, 2709184 - 2709251
Alignment:
Q  28 cactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    |||||||||||||||||||||||||  |||||||||  ||| | ||||||||||||||||||||||||    
T  2709184 cactccccaaatcagtttacatatgctaaactaagtgttgtatgcaaccagaacctaattctaacatc 2709251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 239
Target Start/End: Original strand, 19819786 - 19819903
Alignment:
Q  121 cactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagc 220  Q
    ||||||||| || |||||||||||||||||  |||||| ||||||||| || |||| |||||||  |||||||||||||||  | ||| || | |||||     
T  19819786 cactcaaaacccaataattcaccataaacct-aaaatttccaattctaacaaaaacttgttaaaatcaaaatcagaattcagaatctacacaattgaagt 19819884  T
Q  221 agacctcacccttacctta 239  Q
    | |||||||||||||||||    
T  19819885 aaacctcacccttacctta 19819903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 10469961 - 10469888
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||||||  ||||||||||| | |||||||| |||| ||||| | ||||||||||||||||||||||||    
T  10469961 aaacctgttaaactcaaaatcagaaattaataactacactattgaagtaaacctcacccttaccttaattcaga 10469888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 13127509 - 13127436
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||||||  ||||||||||| | |||||||| |||| ||||| | ||||||||||||||||||||||||    
T  13127509 aaacctgttaaactcaaaatcagaaattaataactacactattgaagtaaacctcacccttaccttaattcaga 13127436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 242
Target Start/End: Complemental strand, 34133185 - 34133120
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaatt 242  Q
    ||||||||  ||||||||||| |||||||||||| |||||||| | ||||||||||||||||||||    
T  34133185 ctgttaaacacaaaatcagaaatcaataactatattactgaagaaaacctcacccttaccttaatt 34133120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 239
Target Start/End: Original strand, 29926601 - 29926685
Alignment:
Q  155 aattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    |||||||||||||  |  ||||||||||||  ||||||||||| | |||||||| |||| ||||||| |||||||||||||||||    
T  29926601 aattcccaattctcaccaaaacctgttaaactcaaaatcagaagttaataactacactattgaagcaaacctcacccttacctta 29926685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 155 - 242
Target Start/End: Original strand, 17414948 - 17415040
Alignment:
Q  155 aattcccaatt-ctatcataaacctgttaaatcc----aaaatcagaattcaataactatactactgaagcagacctcacccttaccttaatt 242  Q
    ||||||||||| ||||||||||||||||||||||    ||||||| |||| || | ||| |||||||||| | ||||||||||||||||||||    
T  17414948 aattcccaatttctatcataaacctgttaaatccaaaaaaaatcataattaaacatctacactactgaagtaaacctcacccttaccttaatt 17415040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 239
Target Start/End: Original strand, 4107512 - 4107578
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||||| ||||||||||| |||| | |||||||||||||| | |||||||| ||||||||    
T  4107512 aaacctgttaaattcaaaatcagaaatcaaaatctatactactgaagtaaacctcacctttacctta 4107578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 206 - 246
Target Start/End: Complemental strand, 10582589 - 10582549
Alignment:
Q  206 ctatactactgaagcagacctcacccttaccttaattcaga 246  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  10582589 ctatactactgaagcaaacctcacccttaccttaattcaga 10582549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 14132416 - 14132369
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||||||||||||| || |||||||||||||| ||||||||    
T  14132416 tcccaaaaatctcattttcctcccattcactccccaaattagtttaca 14132369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 16223044 - 16222997
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  16223044 tcccaaaaatcccattttccttccaatcactccccaaatcagtttaca 16222997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 24363328 - 24363375
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  24363328 tcccaaaaatcccattttccttccaatcactccccaaatcagtttaca 24363375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 24369919 - 24369966
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  24369919 tcccaaaaatcccattttccttccaatcactccccaaatcagtttaca 24369966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 25464603 - 25464650
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  25464603 tcccaaaaatcccattttccttccaatcactccccaaatcagtttaca 25464650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 28289575 - 28289528
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||||||||||||||||  |||||||||||||| ||||||||    
T  28289575 tcccaaaaatctcattttccttcaattcactccccaaattagtttaca 28289528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 239
Target Start/End: Original strand, 1071587 - 1071653
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||| ||||| ||||||||||  | |||  |||||||||||||||| |||||||||||||||||    
T  1071587 aaacctgataaattcaaaatcagagattaatgtctatactactgaagcaaacctcacccttacctta 1071653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 239
Target Start/End: Original strand, 24563430 - 24563492
Alignment:
Q  178 tgttaaatc-caaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||| |||| |||||||| |||||||||| |||||||||| | |||||||||||||||    
T  24563430 tgttaaatcacaaattcagaatttaataactatattactgaagcaaatctcacccttacctta 24563492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 26418040 - 26417946
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    ||||||||||  ||||||||| |  ||||||||||||||  ||||||| ||| | || |||||||| | | ||||||||| ||||||||||||||    
T  26418040 tcccaaaaattgcattttcctccaattcactccccaaattggtttacaaatgcagaattaagtactatatgcaaccagaaactaattctaacatc 26417946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 239
Target Start/End: Original strand, 27768282 - 27768348
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||||  ||||||||||| | || | |||||||||||||| | |||||||||||||||||    
T  27768282 aaacctgttaaactcaaaatcagaaattaaaatctatactactgaagtaaacctcacccttacctta 27768348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 24363489 - 24363562
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    |||||||||||| ||||||||||| || || | ||| |||| ||||| | ||||||||||||||||| ||||||    
T  24363489 aaacctgttaaaaccaaaatcagactttaaaatctacactaatgaagtaaacctcacccttaccttagttcaga 24363562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 24370080 - 24370153
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    |||||||||||| ||||||||||| || || | ||| |||| ||||| | ||||||||||||||||| ||||||    
T  24370080 aaacctgttaaaaccaaaatcagactttaaaatctacactaatgaagtaaacctcacccttaccttagttcaga 24370153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 29159781 - 29159830
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttacatat 51  Q
    |||||||||| |||||| |||||  |||||||||||||||||||||||||    
T  29159781 cccaaaaatcccatttttcttccaatcactccccaaatcagtttacatat 29159830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 1593535 - 1593582
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| ||||||||| |  |||||||||||||||||||||||    
T  1593535 tcccaaaaatcccattttcctccaattcactccccaaatcagtttaca 1593582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 240
Target Start/End: Complemental strand, 8068914 - 8068851
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaa 240  Q
    ||||||||| |||| |||||| | |||||||| |||| ||||| | ||||||||||||||||||    
T  8068914 ctgttaaattcaaattcagaaattaataactacactattgaagtaaacctcacccttaccttaa 8068851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 240
Target Start/End: Complemental strand, 10463439 - 10463377
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaa 240  Q
    ||||||||  ||||||||||| | ||||||||||||| ||||| | ||||||||||||||||||    
T  10463439 ctgttaaacacaaaatcagaaattaataactatactattgaagta-acctcacccttaccttaa 10463377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 13941355 - 13941426
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattca 244  Q
    ||||||||||||  | || ||||||||  ||| |||||||||||||| | | ||||||||||||||||||||    
T  13941355 aaacctgttaaactccaattcagaatttcatatctatactactgaagtaaaactcacccttaccttaattca 13941426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 17882023 - 17881969
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcaccct 232  Q
    ||||||||  |||||||| |||| ||||||||||||||||||||| ||||||||||    
T  17882023 ctgttaaacacaaaatcaaaatt-aataactatactactgaagcaaacctcaccct 17881969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 239
Target Start/End: Original strand, 19440661 - 19440712
Alignment:
Q  188 aaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||||||  | |||||||| ||||||| |||||||||||||||||    
T  19440661 aaaatcagaattcagaatctatactaatgaagcaaacctcacccttacctta 19440712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 239
Target Start/End: Complemental strand, 19587798 - 19587731
Alignment:
Q  173 aaacctgttaaa-tccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    |||||||||||| || |||||||||||| |  | |||||||| ||||||| |||||||||||||||||    
T  19587798 aaacctgttaaactcaaaaatcagaatttagaatctatactaatgaagcaaacctcacccttacctta 19587731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 19727412 - 19727459
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||||||||||||| |   ||||||||||||||||||||||    
T  19727412 tcccaaaaatctcattttcctccaaatcactccccaaatcagtttaca 19727459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 21724128 - 21724081
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| ||||||||| |  |||||||||||||||||||||||    
T  21724128 tcccaaaaatcccattttcctccaattcactccccaaatcagtttaca 21724081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 242
Target Start/End: Complemental strand, 26417926 - 26417809
Alignment:
Q  125 caaaaacccataattcaccataaacccgaaaattcccaattct-atcataaacctgttaaatccaaaatcagaattcaataactatac-tactgaagcag 222  Q
    ||||||||  ||||||| || |||||| | |||| |||||||| | || ||||||||||||  |||| ||||||||||||| |||||| |||||||| |     
T  26417926 caaaaaccattaattcatcacaaaccc-ataatttccaattctcaccaaaaacctgttaaactcaaa-tcagaattcaatacctatacttactgaagtaa 26417829  T
Q  223 acctcacccttaccttaatt 242  Q
    | ||||||||||||||||||    
T  26417828 aactcacccttaccttaatt 26417809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 15331504 - 15331458
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||| |||||| |||||  ||||||||||||||||||||||    
T  15331504 cccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 15331458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 17310429 - 17310475
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||| |||||| |||||  ||||||||||||||||||||||    
T  17310429 cccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 17310475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 19096008 - 19095946
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||  |||||||||||||||||||||| | |  ||||| | |||||||||||||||||    
T  19096008 ctgttaaacacaaaatcagaattcaataactacattcttgaagtaaacctcacccttacctta 19095946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 19096173 - 19096127
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||| |||||| |||||  ||||||||||||||||||||||    
T  19096173 cccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 19096127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 239
Target Start/End: Complemental strand, 30798910 - 30798844
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||||| ||||||||||||| |||||||| | |  ||||| | |||| ||||||||||||    
T  30798910 aaacctgttaaatacaaaatcagaatttaataactacattcttgaagtaaaccttacccttacctta 30798844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 30799071 - 30799025
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||| |||||| |||||  ||||||||||||||||||||||    
T  30799071 cccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 30799025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 933733 - 933652
Alignment:
Q  158 tcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    |||||||||| ||||||| ||||||||  |||||||||||||||  | |||||| | ||  | | |||||||||||||||||    
T  933733 tcccaattctctcataaatctgttaaaaacaaaatcagaattcagaacctatacaattgcggtaaacctcacccttacctta 933652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 95
Target Start/End: Original strand, 17414821 - 17414890
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    ||||||||||||||||||||||| |||| |||  || |||||| | ||  ||||||||| ||||||||||    
T  17414821 ttcactccccaaatcagtttacagatgtgaaatgaaatactgtatgcactcagaacctatttctaacatc 17414890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 19727559 - 19727640
Alignment:
Q  158 tcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    |||||||||| ||||||| ||||||||  |||||||||||||||  | |||||| | ||  | | |||||||||||||||||    
T  19727559 tcccaattctctcataaaactgttaaaaacaaaatcagaattcagaacctatacaattgcggtaaacctcacccttacctta 19727640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 22907858 - 22907939
Alignment:
Q  158 tcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    |||||||||| |||||||||| |||||  |||||||||||||||  | |||||| | ||  | | |||||||||||||||||    
T  22907858 tcccaattctctcataaacctattaaaatcaaaatcagaattcagaacctatacaattgcggtaaacctcacccttacctta 22907939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 14374624 - 14374519
Alignment:
Q  135 taattcaccataaacccgaaaattcccaatt--ctatcataaacctgttaaa-tccaaaatcagaattcaataactatactactgaagcagacctcaccc 231  Q
    ||||||| ||||||||  |||||||||||||  ||| || |||| ||||||| || |||||||||||| |  | |||||||| ||||||| |||||||||    
T  14374624 taattcaacataaacct-aaaattcccaattttctacca-aaacttgttaaactcaaaaatcagaatttagaatctatactaatgaagcaaacctcaccc 14374527  T
Q  232 ttacctta 239  Q
    ||||||||    
T  14374526 ttacctta 14374519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 26 - 246
Target Start/End: Complemental strand, 8629 - 8410
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    |||||||||||||| |||||||| ||||||||||||||  ||| | ||||| ||||||| ||||||||||  || | |||| |||| |||||||||||||    
T  8629 ttcactccccaaattagtttacagatgtaaaactaagtgttgtatgcaacccgaacctatttctaacatcaaaacaacaatctctacactcaattcactc 8530  T
Q  126 aaaaaccca-taattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcaga 223  Q
    ||||||||| |||| || ||||||||| ||||| ||||||| ||| ||||| | ||||||| ||||||||||||||||||| |||||||||||||||| |    
T  8529 aaaaacccaataatccaacataaaccc-aaaatccccaatttctaccataa-cttgttaaa-ccaaaatcagaattcaatatctatactactgaagcaaa 8433  T
Q  224 cctcacccttaccttaattcaga 246  Q
    |||||||||||||||||||||||    
T  8432 cctcacccttaccttaattcaga 8410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 93; Significance: 2e-45; HSPs: 78)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 26 - 240
Target Start/End: Complemental strand, 23443584 - 23443370
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    |||||||||||||| |||||||| || | ||||||| | |||| | ||||||||||||| ||||||||||  || |||||| |||| |||||||||||||    
T  23443584 ttcactccccaaattagtttacagatatgaaactaaatgctgtatgcaaccagaacctatttctaacatcaaaacagcaatctctacactcaattcactc 23443485  T
Q  126 aaaaaccc-ataattcaccataaacccgaaaattcccaa-ttctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcaga 223  Q
    |||||||| ||||| || ||||||||| ||||| ||||| ||||| ||  |||||||||||| |||||||||||||||||| ||||||||| |||||| |    
T  23443484 aaaaacccaataatccaacataaaccc-aaaatccccaatttctaccaataacctgttaaat-caaaatcagaattcaatatctatactaccgaagcaaa 23443387  T
Q  224 cctcacccttaccttaa 240  Q
    |||||||||||||||||    
T  23443386 cctcacccttaccttaa 23443370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 26 - 246
Target Start/End: Original strand, 21830332 - 21830542
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    ||||||||||||||||||||||| |||  |||||||||  ||| | |||||||||||||| ||||||||| |||   |||| ||||         ||| |    
T  21830332 ttcactccccaaatcagtttacagatgctaaactaagtgttgtatgcaaccagaacctaactctaacatcagaaccacaatctcta---------caccc 21830422  T
Q  126 aaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacc 225  Q
    |||| || | |||||||||||||||  |||||| |||||| | ||||||||||||||||  ||||||||||||||| |||||| |||| ||||||| | |    
T  21830423 aaaacccaacaattcaccataaacct-aaaatttccaattttctcataaacctgttaaaatcaaaatcagaattcattaactacactattgaagcaaatc 21830521  T
Q  226 tcacccttaccttaattcaga 246  Q
    |||||||||||||||||||||    
T  21830522 tcacccttaccttaattcaga 21830542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 246
Target Start/End: Complemental strand, 15193351 - 15193131
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    ||||||||||||||||||||||| || | |||  || | |||| | ||  ||||||||| ||||||||||  |  ||  ||| ||| ||||||||||| |    
T  15193351 ttcactccccaaatcagtttacagatatgaaatgaaatgctgtatgcactcagaacctatttctaacatcaaaccagtgattcctacactcaattcaccc 15193252  T
Q  126 aaaaacccat-aattcaccataaacccgaaaattcccaattc-tatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcaga 223  Q
    |||||||||  |||||| | ||||||| ||||| |||||||| || ||||||||||||||| |||||||||||||| || | ||| |||||||||| | |    
T  15193251 aaaaacccaagaattcaacttaaaccc-aaaatccccaattcctaccataaacctgttaaa-ccaaaatcagaattaaacatctacactactgaagtaaa 15193154  T
Q  224 cctcacccttaccttaattcaga 246  Q
    |||||||||||||||||||||||    
T  15193153 cctcacccttaccttaattcaga 15193131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 23081401 - 23081307
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    |||| |||||| |||||| ||||  |||||||||||||| |||| ||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  23081401 tccccaaaatcccatttttcttcaattcactccccaaattagttaacagatgtaaaactaagtgctgtctacaaccagaacctaattctaacatc 23081307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 21889355 - 21889601
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaat 100  Q
    ||||||||||| || ||||||    ||||||||||||||||||||||| || | |||  || | |||| | ||| ||||||||| |||||||||   |      
T  21889355 tcccaaaaatcccaatttcctcaatttcactccccaaatcagtttacagatatgaaatgaaatgctgtatgcaatcagaacctatttctaacataaaacc 21889454  T
Q  101 agcaatttctatactcaattcactcaaaaacccata--attcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaa 197  Q
    ||  ||| ||| ||||||||||| |||||| ||| |  ||||| | ||||||| ||||| ||||||| ||| ||||||||||||||| ||||||||||||    
T  21889455 agtgattcctacactcaattcacccaaaaaaccaaagaattcaacttaaaccc-aaaatccccaatttctaccataaacctgttaaa-ccaaaatcagaa 21889552  T
Q  198 ttcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    || || | ||| |||||||||| | ||||||||||||||||||||||||    
T  21889553 ttaaaaatctacactactgaagtaaacctcacccttaccttaattcaga 21889601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 19363337 - 19363570
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaat 100  Q
    |||| |||||| |||||| ||||  |||||||||||||| |||||||| ||| ||||||||||  |||||||||||||||||||||||||||||| |||     
T  19363337 tccccaaaatcccatttttcttcaattcactccccaaattagtttacagatgcaaaactaagtgttgtctacaaccagaacctaattctaacatcagaac 19363436  T
Q  101 agcaatttctatactcaattcactcaaaaacccataatt-caccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaatt 199  Q
    | |||||||           ||||| |||  | |||||| || ||||| ||  ||||||| |||||||| |||||  |||||||||| |||||||||| |    
T  19363437 atcaatttca----------cactctaaactcaataatttcatcataaccc--aaaattctcaattctaccataactctgttaaatc-aaaatcagaact 19363523  T
Q  200 caataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
     |  | ||||||||| |||||| |||||||| |||||||||||||||    
T  19363524 tagaatctatactacagaagcaaacctcaccgttaccttaattcaga 19363570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 427990 - 428225
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaat 100  Q
    ||||||||||| |||||||||    |||||||| ||||| |||||||| ||| ||||||||||  | | | |||||||||||||||||||||||| |||     
T  427990 tcccaaaaatcccattttcctcaaattcactccgcaaattagtttacagatgcaaaactaagtgttatatgcaaccagaacctaattctaacatcagaac 428089  T
Q  101 agcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattc 200  Q
    | |||| ||||         |||||||||  | |||||||  ||  ||||  |||  ||| | ||||| || || | ||||||| |||||||||||||||    
T  428090 aacaatctcta---------cactcaaaactcaataattcgtcaataacctaaaatctccaatttctaccaaaagcttgttaaa-ccaaaatcagaattc 428179  T
Q  201 aataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    |||||||| |||| ||||||| ||||||||||||||||||||||||    
T  428180 aataactacactattgaagcaaacctcacccttaccttaattcaga 428225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 246
Target Start/End: Complemental strand, 23560968 - 23560734
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaata 101  Q
    |||||||||| ||||||||| |  |||||||||||||| |||||||| ||| |  |||||||  ||| | ||||||||||||||||||||||||  || |    
T  23560968 cccaaaaatcccattttcctccaattcactccccaaattagtttacagatgcaggactaagtgttgtatgcaaccagaacctaattctaacatcaaaaca 23560869  T
Q  102 gcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattc 200  Q
    ||||| || |         |||||||||  | |||||||| |||||| || ||||| ||||||| ||| || |||| |||||||  |||||||||||||     
T  23560868 gcaatctcca---------cactcaaaactcaataattcatcataaa-cctaaaatccccaattcctacca-aaacttgttaaactcaaaatcagaattt 23560780  T
Q  201 aataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    || ||||| |||| ||||||| ||||||||||||| ||||||||||    
T  23560779 aaaaactacactattgaagcaaacctcacccttacattaattcaga 23560734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 23075688 - 23075594
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    |||| |||||| |||||| ||||  |||||||||||||| |||| ||| ||||||||||||||  |||||||||| |||||||||||||||||||    
T  23075688 tccccaaaatcccatttttcttcaattcactccccaaattagttaacagatgtaaaactaagtgttgtctacaactagaacctaattctaacatc 23075594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 18940611 - 18940519
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaaca 93  Q
    |||| |||||| |||||| ||||  |||||||||||||| |||| ||| |||| |||||||||  ||||||||||||||||||||||||||||    
T  18940611 tccccaaaatcccatttttcttcaattcactccccaaattagttaacagatgttaaactaagtgatgtctacaaccagaacctaattctaaca 18940519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 6403753 - 6403651
Alignment:
Q  136 aattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttac 235  Q
    |||||| ||||||||| ||||||| |||||||  |||||||||||||||  ||||||||||||| |  ||||| |||| ||||||| |||||||| ||||    
T  6403753 aattcaacataaaccccaaaattctcaattctcacataaacctgttaaaatcaaaatcagaatttatcaactacactattgaagcaaacctcacctttac 6403654  T
Q  236 ctt 238  Q
    |||    
T  6403653 ctt 6403651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 111
Target Start/End: Original strand, 20843840 - 20843946
Alignment:
Q  5 aaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagca 104  Q
    ||||||| ||||||||| |  |||||||||||||| | |||||| ||| ||||||||||  ||| | |||||||||||||||||||||||| ||| ||||    
T  20843840 aaaaatcccattttcctccaattcactccccaaattaatttacagatgcaaaactaagtgttgtatgcaaccagaacctaattctaacatcagaacagca 20843939  T
Q  105 atttcta 111  Q
    || ||||    
T  20843940 atctcta 20843946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 598138 - 598207
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||| ||||||||||| |||||||||| |||| ||||| | ||||||||||||||||||||||||    
T  598138 ctgttaaattcaaaatcagaaatcaataactacactattgaagtaaacctcacccttaccttaattcaga 598207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 23544232 - 23544163
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    |||||||||||||| |||| ||| ||||||||||||||  |||||||||||||||| |||||||||||||    
T  23544232 ttcactccccaaattagttaacagatgtaaaactaagtgatgtctacaaccagaacataattctaacatc 23544163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 173 - 239
Target Start/End: Original strand, 33536968 - 33537034
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||||  ||||||||||| ||||||||||||||| ||||| | |||||||||||||||||    
T  33536968 aaacctgttaaactcaaaatcagaaatcaataactatactattgaagtaaacctcacccttacctta 33537034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 242
Target Start/End: Complemental strand, 17938112 - 17938047
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaatt 242  Q
    ||||||||  ||||||||||| |||||||||||| |||||||| | ||||||||||||||||||||    
T  17938112 ctgttaaacacaaaatcagaaatcaataactatattactgaagaaaacctcacccttaccttaatt 17938047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 18940467 - 18940382
Alignment:
Q  155 aattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaa 240  Q
    |||||||||||||  |  ||||||||||||  ||||||||||| | |||||||| |||| ||||||| ||||||||||||||||||    
T  18940467 aattcccaattctcaccaaaacctgttaaactcaaaatcagaaattaataactacactattgaagcaaacctcacccttaccttaa 18940382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 19509041 - 19509114
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||||||  ||||||||||| |||||||||| | || ||||| | ||||||||||||||||||||||||    
T  19509041 aaacctgttaaactcaaaatcagaaatcaataactacattattgaagtaaacctcacccttaccttaattcaga 19509114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 239
Target Start/End: Complemental strand, 19799124 - 19799040
Alignment:
Q  155 aattcccaattct-atcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||||| | || ||||||||||||  ||||||||||||| || | |||||||||||||||| |||||||||||||||||    
T  19799124 aattcccaattctcaccaaaaacctgttaaactcaaaatcagaatt-aacatctatactactgaagcaaacctcacccttacctta 19799040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 178 - 246
Target Start/End: Complemental strand, 22006950 - 22006881
Alignment:
Q  178 tgttaaatc-caaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||| |||| |||||||||||||| | | ||||||||||| ||||||||||||||||||||||||    
T  22006950 tgttaaatcacaaattcagaattcaataattgttctactgaagcaaacctcacccttaccttaattcaga 22006881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 27635107 - 27635023
Alignment:
Q  156 attcccaattctatcataaacc-tgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||||| |||||| | |||||||  ||||||||||||| || | ||||||||| |||||| |||||||||||||||||    
T  27635107 attcccaattctaacataaaacatgttaaaatcaaaatcagaatttaacatctatactaccgaagcaaacctcacccttacctta 27635023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 15462345 - 15462412
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaa 240  Q
    ||||||||||||| ||||||||||||| |||||||| |||  ||||| | ||||||||||||||||||    
T  15462345 aaacctgttaaatacaaaatcagaatttaataactacactcttgaagtaaacctcacccttaccttaa 15462412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 20991062 - 20991109
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||    
T  20991062 tcccaaaaatcccattttccttccattcactccccaaatcagtttaca 20991109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 7773043 - 7772997
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttac 47  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||    
T  7773043 tcccaaaaatctcattttcctcccattcactccccaaatcagtttac 7772997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 15462183 - 15462277
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    ||||||||||| ||||||||||||  |||||||||||||||||||||| ||  | || |||||  | | | ||||||||||| ||||||||||||    
T  15462183 tcccaaaaatcccattttccttccaatcactccccaaatcagtttacagatacataattaagtgttctatgcaaccagaacccaattctaacatc 15462277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 19799735 - 19799681
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaa 56  Q
    |||||||||| |||||| ||||| ||||||||||||||||||||||| |||||||    
T  19799735 cccaaaaatcccatttttcttccattcactccccaaatcagtttacagatgtaaa 19799681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 22232095 - 22232001
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    |||||||||||||||||||||    |||||||||||||| |||||||| |||  |||||| ||  | | | ||||||||||||||||||||||||    
T  22232095 tcccaaaaatctcattttcctcaaattcactccccaaattagtttacagatgctaaactacgtgttatatgcaaccagaacctaattctaacatc 22232001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 5581684 - 5581591
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    |||||||||| ||||||||||||  |||||||||||||||||||||| ||  | || |||||  | | | ||||||||||| ||||||||||||    
T  5581684 cccaaaaatcccattttccttccaatcactccccaaatcagtttacagatacataattaagtgttctatgcaaccagaacccaattctaacatc 5581591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 23544113 - 23544028
Alignment:
Q  155 aattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaa 240  Q
    |||||||||||||  |  ||| ||||||||  ||||||||||||| |  | |||||||||||||||| ||||||||||||||||||    
T  23544113 aattcccaattctcaccaaaaactgttaaactcaaaatcagaatttagaatctatactactgaagcaaacctcacccttaccttaa 23544028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 178 - 246
Target Start/End: Original strand, 20844004 - 20844071
Alignment:
Q  178 tgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||| |||||||||||||| |||||||| | || ||||||| ||||||| ||||||||||||||||    
T  20844004 tgttaaa-ccaaaatcagaatttaataactacattattgaagcaaacctcactcttaccttaattcaga 20844071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 5455201 - 5455248
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  5455201 tcccaaaaatcccattttccttccaatcactccccaaatcagtttaca 5455248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 18567463 - 18567530
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaa 240  Q
    ||||||||||||  ||||||||||| | || | |||||||||||||| | ||||||||||||||||||    
T  18567463 aaacctgttaaactcaaaatcagaaattaaaacctatactactgaagtaaacctcacccttaccttaa 18567530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 20341251 - 20341298
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||||||||||| |||||  ||||||||||||||||||||||    
T  20341251 tcccaaaaatctcatttttcttccaatcactccccaaatcagtttaca 20341298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 240
Target Start/End: Original strand, 25420749 - 25420812
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaa 240  Q
    ||||||||  ||||||||||| | |||  |||||||||||||||| ||||||||||||||||||    
T  25420749 ctgttaaactcaaaatcagaaattaatgtctatactactgaagcaaacctcacccttaccttaa 25420812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 43029754 - 43029801
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  43029754 tcccaaaaatcccattttccttccaatcactccccaaatcagtttaca 43029801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 19508878 - 19508972
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    ||||||||||| |||||| |||||  |||||||||||||||||||||| ||  | || |||||  | | | ||||||||| ||||||||||||||    
T  19508878 tcccaaaaatcccatttttcttccaatcactccccaaatcagtttacagatacataaataagtgttctatgcaaccagaaactaattctaacatc 19508972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 239
Target Start/End: Complemental strand, 19799575 - 19799509
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||||  ||||||||||| |||||||||| || | ||||| | |||||||||||||||||    
T  19799575 aaacctgttaaactcaaaatcagaaatcaataactacacaattgaagtaaacctcacccttacctta 19799509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 22237248 - 22237020
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaat 100  Q
    ||||||||||| |||||||||    ||||||  |||||| |||||||| |||  |||||||||  | | | |||||||||||||||||||||||| |||     
T  22237248 tcccaaaaatcccattttcctcaaattcactttccaaattagtttacagatgctaaactaagtgttatatgcaaccagaacctaattctaacatcagaac 22237149  T
Q  101 agcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaattc-tatcataaacctgttaaatccaaaatcagaatt 199  Q
      |||| ||||      ||   ||||||| || |||||||| ||||||||  |||||||||||||| || || |||| |||||||   ||||||||||||    
T  22237148 cacaatctcta------at---ctcaaaacccaataattcaacataaacct-aaaattcccaattcctacca-aaacttgttaaactgaaaatcagaatt 22237060  T
Q  200 caataactatactactgaagcagacctcacccttacctta 239  Q
     |||| ||| |||| ||||||| |||||||| ||||||||    
T  22237059 gaatagctacactattgaagcaaacctcaccattacctta 22237020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 22380411 - 22380472
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||  ||||||||||| |||||  |||||||||||||||| |||||||||||||||||    
T  22380411 ctgttaaactcaaaatcagaaatcaatgtctatactactgaagca-acctcacccttacctta 22380472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 23075521 - 23075459
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||  ||||||||||| | || | |||||||||||||||| |||||||||||||||||    
T  23075521 ctgttaaactcaaaatcagaaattaacatctatactactgaagcaaacctcacccttacctta 23075459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 23081234 - 23081172
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||  ||||||||||| | || | |||||||||||||||| |||||||||||||||||    
T  23081234 ctgttaaactcaaaatcagaaattaacatctatactactgaagcaaacctcacccttacctta 23081172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 5455362 - 5455435
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    |||||||||||| ||||||||||| || || | ||| |||| ||||| | ||||||||||||||||| ||||||    
T  5455362 aaacctgttaaaaccaaaatcagactttaaaatctacactaatgaagtaaacctcacccttaccttagttcaga 5455435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 20938547 - 20938628
Alignment:
Q  158 tcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    |||||||||| ||||||||||||||||  |||||||||||||||  | |||||| | ||  | | |||||||||||||||||    
T  20938547 tcccaattctctcataaacctgttaaaaacaaaatcagaattcagaacctatacaattgcggtaaacctcacccttacctta 20938628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 22501855 - 22501924
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||| |||| |||||| | ||   |||||||||||||| | ||||||||||||||||||||||||    
T  22501855 ctgttaaattcaaattcagaaattaaagtctatactactgaagtaaacctcacccttaccttaattcaga 22501924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 22508436 - 22508505
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||| |||| |||||| | ||   |||||||||||||| | ||||||||||||||||||||||||    
T  22508436 ctgttaaattcaaattcagaaattaaagtctatactactgaagtaaacctcacccttaccttaattcaga 22508505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 25847214 - 25847283
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||  ||||||||||||| |||||||| | |  ||||| | ||||||||||||||||||||||||    
T  25847214 ctgttaaacacaaaatcagaatttaataactacattcttgaagtaaacctcacccttaccttaattcaga 25847283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 25853795 - 25853864
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||  ||||||||||||| |||||||| | |  ||||| | ||||||||||||||||||||||||    
T  25853795 ctgttaaacacaaaatcagaatttaataactacattcttgaagtaaacctcacccttaccttaattcaga 25853864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 246
Target Start/End: Original strand, 21495818 - 21495910
Alignment:
Q  154 aaattcccaatt-ctatcataaacctgttaaatccaaaatcagaatt-caataactatactactgaa-gcagacctcacccttaccttaattcaga 246  Q
    |||||||||||| ||| |||||||| |||||| |||||||||||||| ||||  |||||||| |||| | | ||||||||||||||||||||||||    
T  21495818 aaattcccaatttctaccataaaccggttaaa-ccaaaatcagaattacaat--ctatactattgaaagtaaacctcacccttaccttaattcaga 21495910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 24799774 - 24799730
Alignment:
Q  4 caaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||| ||||||||||||  ||||||||||||||||||||||    
T  24799774 caaaaatcccattttccttccaatcactccccaaatcagtttaca 24799730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 246
Target Start/End: Original strand, 25014541 - 25014601
Alignment:
Q  186 ccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    |||||||||||||| || | |||||||||||||| | ||||| |||||||||| |||||||    
T  25014541 ccaaaatcagaattaaaaatctatactactgaagtaaacctcccccttaccttgattcaga 25014601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 1111075 - 1111028
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| |||||| |||||  ||||||||||||||||||||||    
T  1111075 tcccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 1111028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 246
Target Start/End: Complemental strand, 7772843 - 7772808
Alignment:
Q  211 ctactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||||| ||||||||||||||||||||||||    
T  7772843 ctactgaagcaaacctcacccttaccttaattcaga 7772808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 14881709 - 14881654
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaa 56  Q
    |||| |||||| |||||| |||||  |||||||||||||||||||||| |||||||    
T  14881709 tccccaaaatcccatttttcttccaatcactccccaaatcagtttacagatgtaaa 14881654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 14888386 - 14888331
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaa 56  Q
    |||| |||||| |||||| |||||  |||||||||||||||||||||| |||||||    
T  14888386 tccccaaaatcccatttttcttccaatcactccccaaatcagtttacagatgtaaa 14888331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 17938278 - 17938231
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| |||||| |||||  ||||||||||||||||||||||    
T  17938278 tcccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 17938231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 20341412 - 20341479
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaa 240  Q
    ||||||||||||| |||||||||| || || | ||| |||| ||||| | ||||||||||||||||||    
T  20341412 aaacctgttaaattcaaaatcagactttaaaatctacactattgaagtaaacctcacccttaccttaa 20341479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 20347855 - 20347902
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| |||||| |||||  ||||||||||||||||||||||    
T  20347855 tcccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 20347902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 20348016 - 20348083
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaa 240  Q
    ||||||||||||| |||||||||| || || | ||| |||| ||||| | ||||||||||||||||||    
T  20348016 aaacctgttaaattcaaaatcagactttaaaatctacactattgaagtaaacctcacccttaccttaa 20348083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 20938400 - 20938447
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| ||||||||| |  |||||||||||||||||||||||    
T  20938400 tcccaaaaatcccattttcctccaattcactccccaaatcagtttaca 20938447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 240
Target Start/End: Original strand, 24058523 - 24058586
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaa 240  Q
    ||||||||  ||||| ||||| | |||  |||||||||||||||| ||||||||||||||||||    
T  24058523 ctgttaaactcaaaagcagaaattaatgtctatactactgaagcaaacctcacccttaccttaa 24058586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 240
Target Start/End: Original strand, 26651320 - 26651383
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaa 240  Q
    ||||||||  ||||||||||| | ||||||||||||| ||||| | | ||||||||||||||||    
T  26651320 ctgttaaactcaaaatcagaaattaataactatactattgaagtaaaactcacccttaccttaa 26651383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 240
Target Start/End: Original strand, 26922905 - 26922968
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaa 240  Q
    ||||||||  ||||||||||| | ||||||||||||| ||||| | | ||||||||||||||||    
T  26922905 ctgttaaactcaaaatcagaaattaataactatactattgaagtaaaactcacccttaccttaa 26922968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 239
Target Start/End: Complemental strand, 5581523 - 5581457
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    |||| |||||||| ||||||||||||| |||||||| | |  ||||| | |||||||||||||||||    
T  5581523 aaacttgttaaatacaaaatcagaatttaataactacattcttgaagtaaacctcacccttacctta 5581457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 14614345 - 14614299
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||| ||||||||||||  |||||||||||| |||||||||    
T  14614345 cccaaaaatcccattttccttccaatcactccccaaaacagtttaca 14614299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 16774284 - 16774222
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||  ||||||||||| | || | |||||||||||||||| |||||| ||||||||||    
T  16774284 ctgttaaacacaaaatcagaaattaaaatctatactactgaagcaaacctcatccttacctta 16774222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 18894391 - 18894345
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||| ||||||||||||  | ||||||||||||||||||||    
T  18894391 cccaaaaatcccattttccttccaatgactccccaaatcagtttaca 18894345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 22247632 - 22247586
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||| |||||| |||||  ||||||||||||||||||||||    
T  22247632 cccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 22247586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 24008766 - 24008812
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||| |||||| |||||  ||||||||||||||||||||||    
T  24008766 cccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 24008812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 132
Target Start/End: Original strand, 25014381 - 25014487
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    ||||||| ||||||||||||||| ||||| |||||| |  ||| | ||| ||||||||| ||||||||||  |  ||  ||||||| |||| |||||| |    
T  25014381 ttcactcgccaaatcagtttacagatgtataactaaatgatgtatgcaatcagaacctatttctaacatcaaaccagtgatttctacactctattcaccc 25014480  T
Q  126 aaaaacc 132  Q
    |||||||    
T  25014481 aaaaacc 25014487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 25847048 - 25847094
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||| |||||| |||||  ||||||||||||||||||||||    
T  25847048 cccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 25847094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 25853629 - 25853675
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||| |||||| |||||  ||||||||||||||||||||||    
T  25853629 cccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 25853675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 33536807 - 33536861
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaa 56  Q
    |||||||||| |||||| ||||| ||||||||||||||  ||||||| |||||||    
T  33536807 cccaaaaatcccatttttcttccattcactccccaaattggtttacagatgtaaa 33536861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 239
Target Start/End: Complemental strand, 22231982 - 22231867
Alignment:
Q  123 ctcaaaaacccataattcaccataaacccgaaaattcccaattc-tatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagca 221  Q
    ||||||| || |||||||| ||||||||  |||||||||||||| || || |||| |||||||   |||||||||||| |||| ||| |||| ||||| |    
T  22231982 ctcaaaacccaataattcaacataaacct-aaaattcccaattcctacca-aaacttgttaaactgaaaatcagaattgaatagctacactattgaagaa 22231885  T
Q  222 gacctcacccttacctta 239  Q
     ||||||||| |||||||    
T  22231884 aacctcacccctacctta 22231867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 22312056 - 22311975
Alignment:
Q  158 tcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    |||||||||| |||||||| |||||||  |||||||||||||||  | |||||| | ||  | | |||||||||||||||||    
T  22312056 tcccaattctctcataaacttgttaaaaacaaaatcagaattcagaacctatacaattgcggtaaacctcacccttacctta 22311975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 30781940 - 30782013
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||||||  ||||||||||||  || | ||| |||| ||||| | ||||||||||||||||| ||||||    
T  30781940 aaacctgttaaactcaaaatcagaatctaaaatctacactattgaagtaaacctcacccttaccttagttcaga 30782013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 21901236 - 21901184
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgt 53  Q
    ||||||||||| || |||||| |  ||||||||||||||||||||||| ||||    
T  21901236 tcccaaaaatcccaatttcctccatttcactccccaaatcagtttacagatgt 21901184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 29745987 - 29745943
Alignment:
Q  4 caaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||| |||||| ||||| ||||| |||||||||||||||||    
T  29745987 caaaaatcccatttttcttcctttcaccccccaaatcagtttaca 29745943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 240
Target Start/End: Complemental strand, 39608090 - 39608038
Alignment:
Q  188 aaaatcagaattcaataactatactactgaagcagacctcacccttaccttaa 240  Q
    |||||||||| | |||  ||||| |||||||||| ||||||||||||||||||    
T  39608090 aaaatcagaaattaatgtctataatactgaagcaaacctcacccttaccttaa 39608038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 91; Significance: 3e-44; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 26 - 246
Target Start/End: Complemental strand, 449021 - 448801
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    ||||||||||||||||||||||| || | ||||||| |  ||| | ||  ||||||||| ||||||||||  || |||||| |||| |||||||||||||    
T  449021 ttcactccccaaatcagtttacagatatgaaactaaatgttgtatgcattcagaacctatttctaacatcaaaacagcaatctctacactcaattcactc 448922  T
Q  126 aaaaaccca-taattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcaga 223  Q
    ||||||||| |||| || ||||||||| ||||||||||||| ||| ||  ||||||||||||| ||||||||||||||||| |||| ||||||||||| |    
T  448921 aaaaacccaataatccaacataaaccc-aaaattcccaatttctaccaataacctgttaaatc-aaaatcagaattcaatatctattctactgaagcaaa 448824  T
Q  224 cctcacccttaccttaattcaga 246  Q
    |||||||||||||| ||||||||    
T  448823 cctcacccttacctaaattcaga 448801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 179753 - 179986
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaat 100  Q
    |||| |||||| |||||| ||||  |||||||||||||| |||||||| ||| ||||||||||  |||||||||||||||||||||||||||||| |||     
T  179753 tccccaaaatcccatttttcttcaattcactccccaaattagtttacagatgcaaaactaagtgttgtctacaaccagaacctaattctaacatcagaac 179852  T
Q  101 agcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattc 200  Q
    | ||||||| | ||||  |  |||||| |      | |||| |||||  || |||||||||||||||| |||||  ||||||||| ||||||||||| |     
T  179853 atcaatttc-acactc--taaactcaaca------atttcatcataa--cccaaaattcccaattctaccataactctgttaaat-caaaatcagaactt 179940  T
Q  201 aataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    |  | ||||||||| |||||| ||||||||||||||||||||||||    
T  179941 agaatctatactacagaagcaaacctcacccttaccttaattcaga 179986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 240
Target Start/End: Complemental strand, 511820 - 511753
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaa 240  Q
    ||||||||||||  ||||||||||| | || | |||||||||||||| | ||||||||||||||||||    
T  511820 aaacctgttaaactcaaaatcagaaattaaaacctatactactgaagtaaacctcacccttaccttaa 511753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 3e-44; HSPs: 74)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 36445138 - 36444892
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaat 100  Q
    ||||||||||| ||||||||| |  |||||||||||||| |||||||| |||| |||  |  |  ||| | ||  | |||| || | |||||||| |||     
T  36445138 tcccaaaaatcccattttcctccaattcactccccaaattagtttacagatgtgaaataacttgttgtatgcactcggaacttattcctaacatcagaac 36445039  T
Q  101 agcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgtt-aaatccaaaatcagaatt 199  Q
    |||||| |||| |||||| |||| |||||||| | |||||| ||||||||| |||||||||||||||| |||||||||||| |||  |||||||||||||    
T  36445038 agcaatctctacactcaaatcacccaaaaacctagaattcaacataaaccccaaaattcccaattctaacataaacctgttaaaaatcaaaatcagaatt 36444939  T
Q  200 caataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||| ||||||| |||||||||| ||||||||||||||||||||||||    
T  36444938 caacaactatattactgaagcaaacctcacccttaccttaattcaga 36444892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 26 - 246
Target Start/End: Complemental strand, 21685433 - 21685213
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    ||||||||||||||||||||||| || | ||| ||| |  ||| | ||||||||||||| |||||| |||  || || ||| |||| |||||||||||||    
T  21685433 ttcactccccaaatcagtttacagatatgaaattaaatgttgtatgcaaccagaacctatttctaatatcaaaacagtaatctctacactcaattcactc 21685334  T
Q  126 aaaaaccca-taattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcaga 223  Q
    ||||| ||| |||||||| |||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||  | |  ||||||||||||| | |    
T  21685333 aaaaatccaataattcac-ataaaccc-aaaattcccaatttctatcataaacctgttaaacccaaaatcagaattagacatatatactactgaagtaaa 21685236  T
Q  224 cctcacccttaccttaattcaga 246  Q
    |||||||||||||||||||||||    
T  21685235 cctcacccttaccttaattcaga 21685213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 26 - 246
Target Start/End: Complemental strand, 21689782 - 21689562
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    ||||||||||||||||||||||| || | ||| ||| |  ||| | ||||||||||||| |||||| |||  || || ||| |||| |||||||||||||    
T  21689782 ttcactccccaaatcagtttacagatatgaaattaaatgttgtatgcaaccagaacctatttctaatatcaaaacagtaatctctacactcaattcactc 21689683  T
Q  126 aaaaaccca-taattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcaga 223  Q
    ||||| ||| |||||||| |||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||  | |  ||||||||||||| | |    
T  21689682 aaaaatccaataattcac-ataaaccc-aaaattcccaatttctatcataaacctgttaaacccaaaatcagaattagacatatatactactgaagtaaa 21689585  T
Q  224 cctcacccttaccttaattcaga 246  Q
    |||||||||||||||||||||||    
T  21689584 cctcacccttaccttaattcaga 21689562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 27890646 - 27890740
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27890646 tcccaaaaatcccattttccttccattcactccccaaatcagtttacagatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 27890740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 27896979 - 27897073
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27896979 tcccaaaaatcccattttccttccattcactccccaaatcagtttacagatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 27897073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 27902885 - 27902979
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27902885 tcccaaaaatcccattttccttccattcactccccaaatcagtttacagatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 27902979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 27949304 - 27949398
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27949304 tcccaaaaatcccattttccttccattcactccccaaatcagtttacagatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 27949398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 79 - 246
Target Start/End: Complemental strand, 20839234 - 20839068
Alignment:
Q  79 aacctaattctaacatctgaatagcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacct 178  Q
    |||||| |||||||||| ||| | ||||| ||| ||||||||||| |||||||| | |||||| ||||||||| |||||||||||||||  ||||||| |    
T  20839234 aacctatttctaacatcagaacaacaattcctacactcaattcacccaaaaacctagaattcaacataaaccccaaaattcccaattctcacataaactt 20839135  T
Q  179 gttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||  ||||||||||||||| |||||| | || ||||| | ||||||||||||||||||||||||    
T  20839134 gttaaaatcaaaatcagaattcattaactacaatattgaagta-acctcacccttaccttaattcaga 20839068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 76 - 239
Target Start/End: Complemental strand, 19987495 - 19987332
Alignment:
Q  76 cagaacctaattctaacatctgaatagcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaa 175  Q
    ||||||||| | |||| ||| ||| | ||||| ||| |||||||||||||||||||| | |||||| ||||||||| |||||||||||||||  ||||||    
T  19987495 cagaacctattcctaatatcagaacaacaattcctacactcaattcactcaaaaacctagaattcaacataaaccccaaaattcccaattctcacataaa 19987396  T
Q  176 cctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    |||||||||  ||||||||||||| |  ||||| |||| ||||| | |||||||||||||||||    
T  19987395 cctgttaaaatcaaaatcagaatttatcaactacactattgaagtaaacctcacccttacctta 19987332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 26 - 242
Target Start/End: Complemental strand, 21683040 - 21682835
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    |||||||||||||| |||| ||| || | ||||||||| |||| ||||||||||||||| ||||||||||  || | |||| ||||         |||||    
T  21683040 ttcactccccaaattagtt-acagatatgaaactaagtgctgtatacaaccagaacctatttctaacatcaaaacatcaatctcta---------cactc 21682951  T
Q  126 aaaaacccataattcaccataaacccgaaaattcccaattc-tatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagac 224  Q
    ||||  | |||||||| ||||||||  ||||| |||||||| || || |||| ||||||| ||||||||| |||||||||||||||||||||||||| ||    
T  21682950 aaaactcaataattcatcataaacct-aaaatccccaattcctaccaaaaacttgttaaa-ccaaaatcaaaattcaataactatactactgaagcaaac 21682853  T
Q  225 ctcacccttaccttaatt 242  Q
    ||||||||||||||||||    
T  21682852 ctcacccttaccttaatt 21682835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 134 - 246
Target Start/End: Original strand, 19860444 - 19860555
Alignment:
Q  134 ataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcaccctt 233  Q
    |||||||| ||||||||  ||||| || | ||||| |||||||||||| ||  ||||||||||||||||||||||||||| ||||||| |||||||||||    
T  19860444 ataattcatcataaacct-aaaatcccaatttctaccataaacctgttcaaatcaaaatcagaattcaataactatactattgaagcaaacctcaccctt 19860542  T
Q  234 accttaattcaga 246  Q
    |||||||||||||    
T  19860543 accttaattcaga 19860555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 72 - 246
Target Start/End: Original strand, 20007107 - 20007280
Alignment:
Q  72 caaccagaacctaattctaacatctgaatagcaatttctatactcaattcactcaaaaacccataattcaccata-aacccgaaaattcccaattct-at 169  Q
    ||||||||||||| |||||||| |  ||||||||| |||| ||||||||||| |||||||| | ||||||  |   |||||  |||||||||||| | ||    
T  20007107 caaccagaacctatttctaacaccaaaatagcaatatctacactcaattcac-caaaaaccaagaattcaaaacctaaccc--aaattcccaattttcat 20007203  T
Q  170 c-ataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    | | |||||||||||| ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  20007204 ccagaaacctgttaaa-ccaaaattagaattcaatatctatactactgaagcaaacctcacccttaccttaattcaga 20007280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 121 - 242
Target Start/End: Complemental strand, 20258264 - 20258144
Alignment:
Q  121 cactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagc 220  Q
    ||||||||| || |||||||||||||||||  |||||||||||||||| || ||||||||||||  ||||||||||||| | || ||| |||| |||||     
T  20258264 cactcaaaacccaataattcaccataaacct-aaaattcccaattctaacaaaaacctgttaaaatcaaaatcagaattaagtatctacactattgaagt 20258166  T
Q  221 agacctcacccttaccttaatt 242  Q
    | ||||||||||||||||||||    
T  20258165 aaacctcacccttaccttaatt 20258144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 121 - 242
Target Start/End: Complemental strand, 21044894 - 21044774
Alignment:
Q  121 cactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagc 220  Q
    ||||||||| || |||||||||||||||||  |||||||||||||||| || ||||||||||||  ||||||||||||| | || ||| |||| |||||     
T  21044894 cactcaaaacccaataattcaccataaacct-aaaattcccaattctaacaaaaacctgttaaaatcaaaatcagaattaagtatctacactattgaagt 21044796  T
Q  221 agacctcacccttaccttaatt 242  Q
    | ||||||||||||||||||||    
T  21044795 aaacctcacccttaccttaatt 21044774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 29298445 - 29298353
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaaca 93  Q
    |||| |||||| |||||||||||  |||||||||||||| |||||||| ||| |||||||||| |||||||||| ||| ||||||||||||||    
T  29298445 tccccaaaatcccattttccttcaattcactccccaaattagtttacagatgcaaaactaagtgctgtctacaatcaggacctaattctaaca 29298353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 31411876 - 31411650
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaat 100  Q
    |||||||||||||||||||||||  ||||||||||||||  ||||||| ||| | ||||||||||| | | ||||||||| |||||||||||||| |||     
T  31411876 tcccaaaaatctcattttccttcaattcactccccaaattggtttacagatgcagaactaagtactatatgcaaccagaaactaattctaacatcagaac 31411777  T
Q  101 agcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattc 200  Q
    | |||  |||           || | ||||||  ||||||| || |||||| | || ||||||||||  |  |||||| |||||  ||||||||||||||    
T  31411776 aacaaactct-----------accccaaaaccattaattcatcacaaaccc-ataaatcccaattctcaccaaaacctattaaactcaaaatcagaattc 31411689  T
Q  201 aataactatactactgaagcagacctcacccttacctta 239  Q
    |||| |||||||||||||| | | |||||||||||||||    
T  31411688 aatacctatactactgaagtaaaactcacccttacctta 31411650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 93
Target Start/End: Complemental strand, 29304991 - 29304904
Alignment:
Q  6 aaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaaca 93  Q
    |||||| |||||||||||  |||||||||||||| |||||||| ||| ||||||||||  ||||||||| ||| ||||||||||||||    
T  29304991 aaaatcccattttccttcaattcactccccaaattagtttacaaatgcaaaactaagtgttgtctacaatcaggacctaattctaaca 29304904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 31418058 - 31417832
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaat 100  Q
    ||||||||||| |||||||||||  ||||||||||||||  ||||||| ||| | |||| |||||| | | ||||||||| |||||||||||||| |||     
T  31418058 tcccaaaaatcccattttccttcaattcactccccaaattggtttacagatgcagaactgagtactatatgcaaccagaaactaattctaacatcagaac 31417959  T
Q  101 agcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattc 200  Q
    | |||  |||           || | ||||||  ||||||| || |||||| | || ||||||||||  |  ||||||||||||  ||| ||||||||||    
T  31417958 aacaaactct-----------accccaaaaccattaattcatcacaaaccc-ataaatcccaattctcaccaaaacctgttaaactcaatatcagaattc 31417871  T
Q  201 aataactatactactgaagcagacctcacccttacctta 239  Q
    |||| |||||||||||||| | | |||||||||||||||    
T  31417870 aatacctatactactgaagtaaaactcacccttacctta 31417832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 173 - 240
Target Start/End: Complemental strand, 7003275 - 7003208
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaa 240  Q
    ||||||||||||  |||||||||||||||||||||| |||| ||||| | ||||||||||||||||||    
T  7003275 aaacctgttaaactcaaaatcagaattcaataactacactattgaagtaaacctcacccttaccttaa 7003208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 246
Target Start/End: Complemental strand, 20004923 - 20004842
Alignment:
Q  164 ttctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||| ||||||||||||||| |||||||||||||| || | ||| |||||||||| | |||||||||||||||||| |||||    
T  20004923 ttctaccataaacctgttaaa-ccaaaatcagaattaaaaatctacactactgaagtaaacctcacccttaccttaaatcaga 20004842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 35541761 - 35541855
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||| ||  | || |||||  | | ||||||||||| | ||||||||||||    
T  35541761 tcccaaaaatctcattttccttccaatcactccccaaatcagtttacagatacataattaagtgttctatacaaccagaaaccaattctaacatc 35541855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 242
Target Start/End: Complemental strand, 4519930 - 4519865
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaatt 242  Q
    ||||||||  ||||||||||| |||||||||||| |||||||| | ||||||||||||||||||||    
T  4519930 ctgttaaacacaaaatcagaaatcaataactatattactgaagaaaacctcacccttaccttaatt 4519865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 242
Target Start/End: Original strand, 22459027 - 22459092
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaatt 242  Q
    ||||||||  ||||||||||| |||||||||||| |||||||| | ||||||||||||||||||||    
T  22459027 ctgttaaacacaaaatcagaaatcaataactatattactgaagaaaacctcacccttaccttaatt 22459092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 10956052 - 10956005
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||    
T  10956052 tcccaaaaatctcattttccttccaatcactccccaaatcagtttaca 10956005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 239
Target Start/End: Original strand, 6588994 - 6589060
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||||  ||||||||||| |||||||||| |||| ||||| | |||||||||||||||||    
T  6588994 aaacctgttaaactcaaaatcagaaatcaataactacactattgaagtaaacctcacccttacctta 6589060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 27890813 - 27890874
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||  |||||| |||||| ||||||||||||||||||||| |||||||||||||||||    
T  27890813 ctgttaaacacaaaattagaatt-aataactatactactgaagcaaacctcacccttacctta 27890874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 27897146 - 27897207
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||  |||||| |||||| ||||||||||||||||||||| |||||||||||||||||    
T  27897146 ctgttaaacacaaaattagaatt-aataactatactactgaagcaaacctcacccttacctta 27897207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 27903052 - 27903113
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||  |||||| |||||| ||||||||||||||||||||| |||||||||||||||||    
T  27903052 ctgttaaacacaaaattagaatt-aataactatactactgaagcaaacctcacccttacctta 27903113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 27949471 - 27949532
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||  |||||| |||||| ||||||||||||||||||||| |||||||||||||||||    
T  27949471 ctgttaaacacaaaattagaatt-aataactatactactgaagcaaacctcacccttacctta 27949532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 239
Target Start/End: Complemental strand, 30765972 - 30765910
Alignment:
Q  178 tgttaaatc-caaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||| |||| ||||||||||||||||||| |||||||||| | |||||||||||||||    
T  30765972 tgttaaatcacaaattcagaattcaataactatattactgaagcaaatctcacccttacctta 30765910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 14564421 - 14564494
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||| ||||| ||||||||||  | |||  |||||||||||||||| ||||||||||||||||| ||||||    
T  14564421 aaacctgataaattcaaaatcagagattaatgtctatactactgaagcaaacctcacccttaccttagttcaga 14564494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 14567954 - 14568027
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||| ||||| ||||||||||  | |||  |||||||||||||||| ||||||||||||||||| ||||||    
T  14567954 aaacctgataaattcaaaatcagagattaatgtctatactactgaagcaaacctcacccttaccttagttcaga 14568027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 27346592 - 27346661
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||  ||||||||||| |||||||||| |||| ||||| | ||||||| ||||||||||||||||    
T  27346592 ctgttaaactcaaaatcagaaatcaataactacactattgaagtaaacctcacacttaccttaattcaga 27346661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 10947970 - 10947923
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||||||||||| |||||  ||||||||||||||||||||||    
T  10947970 tcccaaaaatctcatttttcttccaatcactccccaaatcagtttaca 10947923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 16886664 - 16886617
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  16886664 tcccaaaaatcccattttccttccaatcactccccaaatcagtttaca 16886617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 29328958 - 29329005
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| |||||||||||| |||||||||||||| ||||||||    
T  29328958 tcccaaaaatcccattttccttccattcactccccaaattagtttaca 29329005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 239
Target Start/End: Original strand, 37240503 - 37240570
Alignment:
Q  172 taaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    |||||||||||||| ||||||||||||| |||||||| | |  ||||| | |||||||||||||||||    
T  37240503 taaacctgttaaatacaaaatcagaatttaataactacattcttgaagtaaacctcacccttacctta 37240570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 5240096 - 5240150
Alignment:
Q  190 aatcagaattcaataactatactactgaagcagacctcacccttaccttaattca 244  Q
    ||||||||||||||| |||||||| ||||| | | ||||||||||||||||||||    
T  5240096 aatcagaattcaatacctatactagtgaagtaaaactcacccttaccttaattca 5240150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 12913619 - 12913573
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||||||||| |||||  ||||||||||||||||||||||    
T  12913619 cccaaaaatctcatttttcttccaatcactccccaaatcagtttaca 12913573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 239
Target Start/End: Complemental strand, 13361362 - 13361296
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||||| ||||||||||||| |||||||| | |  ||||| | |||||||||||||||||    
T  13361362 aaacctgttaaatacaaaatcagaatttaataactacattcttgaagtaaacctcacccttacctta 13361296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 22024953 - 22024903
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatat 51  Q
    ||||||||||| ||||||||| |  ||||||||||||||||||||||||||    
T  22024953 tcccaaaaatcccattttcctccaattcactccccaaatcagtttacatat 22024903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 22178394 - 22178440
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||||||||||||| |  |||||||||||||||||||||||    
T  22178394 cccaaaaatctcattttcctccaattcactccccaaatcagtttaca 22178440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 41008680 - 41008619
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||  |||||||||||||||  |||||||||| ||||||| |||||||||||||||||    
T  41008680 ctgttaaactcaaaatcagaattcag-aactatactaatgaagcaaacctcacccttacctta 41008619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 239
Target Start/End: Original strand, 43688313 - 43688379
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||||  ||||||||||| | || | |||||||||||||| | |||||||||||||||||    
T  43688313 aaacctgttaaactcaaaatcagaaattaaaatctatactactgaagtaaacctcacccttacctta 43688379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 7003437 - 7003380
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaac 58  Q
    ||||||||||| |||||| |||||  |||||||||||||||||||||| || ||||||    
T  7003437 tcccaaaaatcccatttttcttccaatcactccccaaatcagtttacagatataaaac 7003380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 16266074 - 16266001
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||||||  ||||||||||| | || | ||| |||| ||||| | ||||||||||||||||||||||||    
T  16266074 aaacctgttaaactcaaaatcagaaattaaaatctacactattgaagtaaacctcacccttaccttaattcaga 16266001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 22178540 - 22178621
Alignment:
Q  158 tcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    |||||||||| ||||||||||||||||  |||||||||||||||  | |||||| | ||  | | |||||||||||||||||    
T  22178540 tcccaattctctcataaacctgttaaaaacaaaatcagaattcagaacctatacaattgcggtaaacctcacccttacctta 22178621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 23654336 - 23654409
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    |||| |||||||  ||||||||||||  || | |||||||||||||||| ||||| || |||||||||||||||    
T  23654336 aaacttgttaaactcaaaatcagaatcaaacatctatactactgaagcaaacctcccctttaccttaattcaga 23654409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 27364224 - 27364296
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||||||  ||||||||||| |||||||||| |||| |  || | ||||||||||||||||||||||||    
T  27364224 aaacctgttaaactcaaaatcagaaatcaataactacacta-tatagtaaacctcacccttaccttaattcaga 27364296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 35541923 - 35541996
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||||||| ||||||||  ||| |||||||| | |  ||||| | ||||||||||||||||||||||||    
T  35541923 aaacctgttaaatacaaaatcatgatttaataactacattcttgaagtaaacctcacccttaccttaattcaga 35541996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 14594052 - 14593996
Alignment:
Q  76 cagaacctaattctaacatctgaatagcaatttctatactcaattcactcaaaaacc 132  Q
    ||||||||| ||||||||||  || |||||| |||| ||||||||||||||||||||    
T  14594052 cagaacctatttctaacatcaaaaaagcaatctctacactcaattcactcaaaaacc 14593996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 23117941 - 23117997
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaa 57  Q
    ||||| ||||| |||||| ||||| ||||||||||||||||||||||| ||| ||||    
T  23117941 tcccagaaatcccatttttcttccattcactccccaaatcagtttacagatgcaaaa 23117997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 1264831 - 1264878
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||| ||||||||||||||||||  |||||||||||||| ||||||||    
T  1264831 tccccaaaatctcattttccttcaattcactccccaaattagtttaca 1264878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 3224050 - 3224003
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||| ||||||||||||| |||||  ||||||||||||||||||||||    
T  3224050 tccccaaaatctcatttttcttccaatcactccccaaatcagtttaca 3224003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 4520096 - 4520049
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| |||||| |||||  ||||||||||||||||||||||    
T  4520096 tcccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 4520049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 6588832 - 6588879
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| |||||| |||||  ||||||||||||||||||||||    
T  6588832 tcccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 6588879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 22062956 - 22062909
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| ||||||||| |  |||||||||||||||||||||||    
T  22062956 tcccaaaaatcccattttcctccaattcactccccaaatcagtttaca 22062909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 23224064 - 23224017
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||| ||| ||||||||||||  ||||||||||||||||||||||    
T  23224064 tcccaaagatcccattttccttccaatcactccccaaatcagtttaca 23224017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 95
Target Start/End: Complemental strand, 41008819 - 41008752
Alignment:
Q  28 cactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    ||||||||||||||||||||| || | ||||||| |  ||| | ||||||||||||| ||||||||||    
T  41008819 cactccccaaatcagtttacagatatgaaactaaatgttgtatgcaaccagaacctatttctaacatc 41008752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 852228 - 852274
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||| |||||| |||||  ||||||||||||||||||||||    
T  852228 cccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 852274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 244
Target Start/End: Complemental strand, 3223887 - 3223817
Alignment:
Q  174 aacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattca 244  Q
    |||||||||||  ||||||||||||  || | ||| |||| ||||| | ||||||||||||||||||||||    
T  3223887 aacctgttaaactcaaaatcagaatctaaaatctacactattgaagtaaacctcacccttaccttaattca 3223817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 9204716 - 9204670
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||| |||||| |||||  ||||||||||||||||||||||    
T  9204716 cccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 9204670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 239
Target Start/End: Complemental strand, 11391812 - 11391746
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||||  ||||||||||| | || |  ||||||||||||| | |||||||||||||||||    
T  11391812 aaacctgttaaactcaaaatcagaaattaaaatttatactactgaagtaaacctcacccttacctta 11391746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 14736186 - 14736140
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||||| |||||| |||||  ||||||||||||||||||||||    
T  14736186 cccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 14736140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 239
Target Start/End: Complemental strand, 14745724 - 14745658
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||||  ||||||||||||| || | ||| |||| ||||| | |||||||||||||||||    
T  14745724 aaacctgttaaactcaaaatcagaatttaaaatctacactattgaagtaaacctcacccttacctta 14745658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 239
Target Start/End: Complemental strand, 22024807 - 22024725
Alignment:
Q  157 ttcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||| ||| ||||||||||||||||  |||||||||||||||  | |||||| | ||  | | |||||||||||||||||    
T  22024807 ttcccaactctttcataaacctgttaaaatcaaaatcagaattcagaatctatacaattgcggtaaacctcacccttacctta 22024725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 22744504 - 22744598
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    |||||||| || || |||||| |  ||||||||||||||||||||||| ||||  || ||| |  ||| | ||||||||||||| ||||||||||    
T  22744504 tcccaaaattcccaatttcctccatttcactccccaaatcagtttacagatgtgtaattaaatgttgtatgcaaccagaacctatttctaacatc 22744598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 204
Target Start/End: Complemental strand, 20773283 - 20773242
Alignment:
Q  164 ttctatcataaacctgttaaatcc-aaaatcagaattcaata 204  Q
    ||||| |||||||||||||||||| |||||||||||||||||    
T  20773283 ttctaccataaacctgttaaatccaaaaatcagaattcaata 20773242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 204
Target Start/End: Complemental strand, 20783077 - 20783036
Alignment:
Q  164 ttctatcataaacctgttaaatcc-aaaatcagaattcaata 204  Q
    ||||| |||||||||||||||||| |||||||||||||||||    
T  20783077 ttctaccataaacctgttaaatccaaaaatcagaattcaata 20783036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 21669738 - 21669795
Alignment:
Q  179 gttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacc 236  Q
    |||||| | ||||||||||||||  | |||||||| ||||||| ||||||||||||||    
T  21669738 gttaaacctaaaatcagaattcagaatctatactaatgaagcaaacctcacccttacc 21669795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 22056672 - 22056753
Alignment:
Q  158 tcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    |||||||||| |||||||||||||| |  |||||||||||||||  | |||||| | ||  | | |||||||||||||||||    
T  22056672 tcccaattctctcataaacctgttagaatcaaaatcagaattcagaacctatacaattgcggtaaacctcacccttacctta 22056753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 22458863 - 22458908
Alignment:
Q  3 ccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||| |||||| |||||  ||||||||||||||||||||||    
T  22458863 ccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 22458908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 242
Target Start/End: Complemental strand, 23223903 - 23223834
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaatt 242  Q
    ||||||||||||  |||||||||| || || | ||| |||| ||||| | ||||||||||||||||||||    
T  23223903 aaacctgttaaactcaaaatcagactttaaaatctacactattgaagtaaacctcacccttaccttaatt 23223834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 27346429 - 27346473
Alignment:
Q  4 caaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    |||||||| |||||| |||||  ||||||||||||||||||||||    
T  27346429 caaaaatcccatttttcttccaatcactccccaaatcagtttaca 27346473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 4383 - 4138
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaat 100  Q
    |||||||||||||||||||||||  |||||||||||| | |||||||| ||   |||  |  | |||  | ||  ||||||||| ||||||||||  ||     
T  4383 tcccaaaaatctcattttccttcaattcactccccaatttagtttacagatacgaaataacttgctggatgcactcagaacctatttctaacatcaaaac 4284  T
Q  101 agcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattc 200  Q
    |||||| |||| |||||| |||| |||||||| | |||||| ||||||||| |||||||||||||| |||||||||||||||||  |||||||||||||     
T  4283 agcaatctctacactcaaatcacccaaaaacctagaattcaacataaaccccaaaattcccaattccatcataaacctgttaaaatcaaaatcagaattt 4184  T
Q  201 aataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
     | ||||||| |||||||||| |||||||| |||||||||||||||    
T  4183 cacaactatattactgaagcaaacctcaccattaccttaattcaga 4138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 47238 - 46993
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaat 100  Q
    ||||||||||| |||||||||    |||||||||||||| |||||||| |||| |||  |  | |||| | ||  || |||||| |||||||||  |||     
T  47238 tcccaaaaatcacattttcctcgaattcactccccaaattagtttacagatgtgaaataacttgctgtatgcactcataacctatttctaacattagaac 47139  T
Q  101 agcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattc 200  Q
    | |||| | || |||||| |||| |||||||| | |||||| ||||||||| |||||||||||||||| |||||||||||||||  ||||||||||||||    
T  47138 aacaatctttacactcaaatcacccaaaaacctaaaattcaacataaaccccaaaattcccaattctaacataaacctgttaaaatcaaaatcagaattc 47039  T
Q  201 aataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    |  ||||||| |||||||||| ||||||||||||||||||||||||    
T  47038 agcaactatattactgaagcaaacctcacccttaccttaattcaga 46993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0947 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0947
Description:

Target: scaffold0947; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 76 - 243
Target Start/End: Complemental strand, 3514 - 3347
Alignment:
Q  76 cagaacctaattctaacatctgaatagcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaa 175  Q
    ||||||||| |||||||||| ||| |||||| |||  |||||| |||| |||||||| | |||||| ||||||||| |||||||||||||||| |||||     
T  3514 cagaacctatttctaacatcagaacagcaatctctgcactcaaatcacccaaaaacctagaattcaacataaaccccaaaattcccaattctaacataag 3415  T
Q  176 cctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattc 243  Q
    |||||||||  |||||||||||||||| ||||||| |||||||| | |||||||||||||||||||||    
T  3414 cctgttaaaatcaaaatcagaattcaacaactatattactgaagaaaacctcacccttaccttaattc 3347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 143 - 246
Target Start/End: Original strand, 10304 - 10407
Alignment:
Q  143 cataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaatt 242  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  10304 cataaaccccaaaattcccaattctatcataaacctgttaaacccaaaatcataattcaataactatactactgaagcaaacctcacccttaccttaatt 10403  T
Q  243 caga 246  Q
    ||||    
T  10404 caga 10407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 10134 - 10311
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaat 100  Q
    |||||||||||||||||||||    |||| |||||||||  ||||||| || |||||||||||  ||| | ||||||||||||| |||| |||||  ||     
T  10134 tcccaaaaatctcattttcctcaaattcattccccaaatttgtttacagatataaaactaagtgatgtatgcaaccagaacctatttctcacatcaaaac 10233  T
Q  101 agcaatttctatactcaattcactcaaaaaccca-taattcaccataaacccgaaaattcccaattctatcataaacc 177  Q
    |||||| |||| |||||||||||||||| ||||| ||||||| ||||||||| |||||||||||||||||||||||||    
T  10234 agcaatctctacactcaattcactcaaagacccattaattcaacataaaccccaaaattcccaattctatcataaacc 10311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 121 - 246
Target Start/End: Original strand, 7059 - 7184
Alignment:
Q  121 cactcaaaaacccat-aattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaag 219  Q
    ||||||| ||||||| |||||| ||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  7059 cactcaataacccattaattcatcataaaccc-aaaattcccaattttatcataaacctgttaaacccaaaatcagaatccaataactatactactgaag 7157  T
Q  220 cagacctcacccttaccttaattcaga 246  Q
    || ||||||||||||||||||||||||    
T  7158 caaacctcacccttaccttaattcaga 7184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 26 - 246
Target Start/End: Complemental strand, 14312 - 14092
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    ||||||||||||||||||||||| |||||||||||| | |||| | |||  |||||||| |||||||||| ||| || ||| |||| |||||||||||||    
T  14312 ttcactccccaaatcagtttacaaatgtaaaactaaatgctgtatgcaatgagaacctatttctaacatcagaacagtaatctctacactcaattcactc 14213  T
Q  126 aaaaa-cccataattcaccataaacccgaaaattcccaa-ttctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcaga 223  Q
    ||||| || |||||||| ||||||||| ||||| ||||| ||||| || || |||||||||| ||||||  |||||||| | |||||||||||||| | |    
T  14212 aaaaatccaataattcaacataaaccc-aaaatccccaatttctaccaaaatcctgttaaat-caaaataggaattcaacatctatactactgaagaaaa 14115  T
Q  224 cctcacccttaccttaattcaga 246  Q
    |||||||||||||||||| ||||    
T  14114 cctcacccttaccttaatccaga 14092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 26 - 241
Target Start/End: Complemental strand, 207084 - 206869
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    ||||||||||||||||||||||| || | ||||||| |  ||| | |||||| |||||| ||| |||||   || || |||| ||| ||||||||||| |    
T  207084 ttcactccccaaatcagtttacagatatgaaactaaatgatgtatgcaaccaaaacctatttcgaacattaaaacagtaattcctacactcaattcaccc 206985  T
Q  126 aaaaacccataattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagac 224  Q
    ||||||| | |||||| | ||||||| ||||||||||||| ||| ||||||| |||||||| |||||||||||||||| | |||||||||||||||| ||    
T  206984 aaaaaccaagaattcaacttaaaccccaaaattcccaattcctaccataaacatgttaaat-caaaatcagaattcaacatctatactactgaagcaaac 206886  T
Q  225 ctcacccttaccttaat 241  Q
    |||||||||||||||||    
T  206885 ctcacccttaccttaat 206869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 26 - 246
Target Start/End: Original strand, 3065 - 3285
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    ||||||||||||||||||||||| || | ||||||| |  ||| | ||  ||||||||| ||||||||||  || |||||| |||| | |||||||||||    
T  3065 ttcactccccaaatcagtttacagatatgaaactaaatgttgtatgcattcagaacctatttctaacatcaaaacagcaatctctacaatcaattcactc 3164  T
Q  126 aaaaaccca-taattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcaga 223  Q
    ||||| ||| |||| || ||||||||| ||||||||||||| ||| ||  ||||||||||||| ||||||||||||||||| |||| ||||||||||| |    
T  3165 aaaaaaccaataatccaacataaaccc-aaaattcccaatttctaccaataacctgttaaatc-aaaatcagaattcaatatctattctactgaagcaaa 3262  T
Q  224 cctcacccttaccttaattcaga 246  Q
    |||||||||||||| ||||||||    
T  3263 cctcacccttacctcaattcaga 3285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 11711 - 11473
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaat 100  Q
    ||||||||||||| |||||||    |||||||||||||| |||||||| || | |||  || | ||||  |||  ||||||||| |||||||  |  ||     
T  11711 tcccaaaaatctcgttttcctcaaattcactccccaaattagtttacagatatgaaatgaaatgctgttcacactcagaacctatttctaaccccaaaac 11612  T
Q  101 agcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattc 200  Q
    | |||  ||||  |||||||||||||||||||||||| ||| ||||||||| |||||||||||||||  ||||||| |||||||  ||||||||||||||    
T  11611 atcaacctctacgctcaattcactcaaaaacccataaatcaacataaaccccaaaattcccaattctcacataaacttgttaaaatcaaaatcagaattc 11512  T
Q  201 aataactatactactgaagcagacctcacccttacctta 239  Q
    ||||  ||||||| ||||||| |||||||||||||||||    
T  11511 aatatttatactattgaagcaaacctcacccttacctta 11473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0923 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0923
Description:

Target: scaffold0923; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 246
Target Start/End: Original strand, 650 - 859
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    |||||||||||||| |||||||| || | ||||||||  |||| ||||||||||||||| ||||||||||  ||||||||| ||||         |||||    
T  650 ttcactccccaaattagtttaca-atatgaaactaagcgctgtatacaaccagaacctatttctaacatcaaaatagcaatctcta---------cactc 739  T
Q  126 aaaaacccataattcaccataaacccgaaaattcccaattc-tatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagac 224  Q
    ||||  | |||||||| ||||||||  ||||| |||||||| || || |||| ||||||| |||||||||||||||||||||||||||||||||||| ||    
T  740 aaaactcaataattcatcataaacct-aaaatccccaattcctacca-aaacttgttaaacccaaaatcagaattcaataactatactactgaagcaaac 837  T
Q  225 ctcacccttaccttaattcaga 246  Q
    ||||||||||||||||||||||    
T  838 ctcacccttaccttaattcaga 859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 246
Target Start/End: Complemental strand, 727 - 483
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaata 101  Q
    |||||||||| ||||||||| |  |||||||||||||| |||||||| ||  ||||  |  |||||| | ||  |||||| || ||||||||||  || |    
T  727 cccaaaaatcccattttcctccaattcactccccaaattagtttacagatacaaaataacttactgtatgcactcagaacgtatttctaacatcaaaaca 628  T
Q  102 gcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaattc-tatcataaacctgttaaatccaaaatcagaattc 200  Q
    | |||| ||| ||||||||||| |||| ||| | |||||| | ||||||| ||||| |||||||| || ||||||||||||||| ||||||||||||||     
T  627 gtaattcctacactcaattcacccaaacaccaagaattcaacttaaaccccaaaatccccaattcctaccataaacctgttaaa-ccaaaatcagaatta 529  T
Q  201 aataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
     | | |||||||||||||||| ||||||||||||||||||||||||    
T  528 gacatctatactactgaagcaaacctcacccttaccttaattcaga 483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0661 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0661
Description:

Target: scaffold0661; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 3441 - 3196
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaat 100  Q
    ||||||||||| |||||||||    |||||||||||||| |||||||| || | ||||||| |  ||| | ||  || |||||| ||||||||||  |      
T  3441 tcccaaaaatcccattttcctcaaattcactccccaaattagtttacagatatgaaactaaatgttgtatgcactcaaaacctatttctaacatcaaacc 3342  T
Q  101 agcaatttctatactcaattcactcaaaaacccat-aattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaat 198  Q
    ||  ||| ||| ||||||||||| |||||||| |  |||||| ||||||||| ||||| | ||||| ||  ||||||||||||||| |||||||||||||    
T  3341 agtgattcctacactcaattcacccaaaaaccaaagaattcaacataaaccc-aaaatcctcaatttcttccataaacctgttaaa-ccaaaatcagaat 3244  T
Q  199 tcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3243 tcaataactatactactgaagcaaacctcacccttaccttaattcaga 3196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 108 - 240
Target Start/End: Complemental strand, 16151 - 16020
Alignment:
Q  108 tctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataact 207  Q
    |||| |||||| |||||||||| ||||||| ||| ||||||||| |||||||||||||||  ||||||| ||||| |  |||||||||||||||||| ||    
T  16151 tctacactcaaatcactcaaaa-cccataaatcaacataaaccccaaaattcccaattctcacataaacttgttagaatcaaaatcagaattcaatatct 16053  T
Q  208 atactactgaagcagacctcacccttaccttaa 240  Q
    | |||||||||||| ||||||||||||||||||    
T  16052 acactactgaagcaaacctcacccttaccttaa 16020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 246
Target Start/End: Original strand, 9250 - 9483
Alignment:
Q  3 ccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatag 102  Q
    ||||||||| ||||||||| |  |||||||||||||| |||||||| | | ||||||||||||||| | |||||||||||||||||||||||| ||  ||    
T  9250 ccaaaaatcccattttcctccaattcactccccaaattagtttacagaagcaaaactaagtactgtatgcaaccagaacctaattctaacatcagagcag 9349  T
Q  103 caatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaa-ttctatcataaacctgttaaatccaaaatcagaattca 201  Q
    |||| ||||         ||| ||||| || |||||||| ||| ||||| ||||||| ||| ||||| || |||| |||||||  ||||||||||||       
T  9350 caatctcta---------cacccaaaacccaataattcatcat-aaccctaaaattctcaatttctacca-aaacttgttaaactcaaaatcagaatcag 9438  T
Q  202 ataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    | | |||||||||||||||| ||||||||||||||||||||||||    
T  9439 acatctatactactgaagcaaacctcacccttaccttaattcaga 9483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 69; Significance: 4e-31; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 246
Target Start/End: Original strand, 45135 - 45368
Alignment:
Q  3 ccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatag 102  Q
    ||||||||| ||||||||| |  |||||||||||||| |||||||| ||| ||||||||||||||| | |||||||||||||||||||||||| ||| ||    
T  45135 ccaaaaatcccattttcctccaattcactccccaaattagtttacagatgcaaaactaagtactgtatgcaaccagaacctaattctaacatcagaacag 45234  T
Q  103 caatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattca 201  Q
    |||         ||| | ||| ||||| || |||||||| |||||| || ||||||||||||| ||| || |||| |||| ||  ||||||||||||       
T  45235 caa---------tcactacacccaaaacccaataattcatcataaa-cctaaaattcccaattcctacca-aaacttgttcaactcaaaatcagaatcag 45323  T
Q  202 ataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||| |||||||||| ||||| || |||||||||||||||||||||    
T  45324 atatctatactactaaagcaaacatcacccttaccttaattcaga 45368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 239
Target Start/End: Complemental strand, 100900 - 100835
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||||  ||||||||||||| || | |||||||||||||| | |||||| ||||||||||    
T  100900 aaacctgttaaactcaaaatcagaatt-aacatctatactactgaagtaaacctcatccttacctta 100835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 242
Target Start/End: Complemental strand, 2656 - 2455
Alignment:
Q  31 tccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactcaaaaa 130  Q
    |||||||||  ||||||| |||  |||||||||  ||| | |||| ||||||||||||||||||| ||| |||||| ||||         ||| |||||     
T  2656 tccccaaattggtttacagatgctaaactaagtgttgtatgcaacgagaacctaattctaacatcagaacagcaatctcta---------cacccaaaac 2566  T
Q  131 cccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacc 230  Q
     | |||||||||||||||||  ||| ||||||||||| ||||||||||||||||  ||||||||||||||| |||||| |||| ||||||| ||||||||    
T  2565 tcaataattcaccataaacct-aaatttcccaattctctcataaacctgttaaaatcaaaatcagaattcattaactacactattgaagcaaacctcacc 2467  T
Q  231 cttaccttaatt 242  Q
    ||||||||||||    
T  2466 cttaccttaatt 2455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 242
Target Start/End: Complemental strand, 11369 - 11163
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    ||||||| ||||||  ||||||| |||  ||||||||| |||| | |||||||||||||||||||||||  ||| | |||| ||||         ||| |    
T  11369 ttcactctccaaattggtttacagatgctaaactaagtgctgtatgcaaccagaacctaattctaacattagaacaacaatctcta---------caccc 11279  T
Q  126 aaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacc 225  Q
    ||||  | |||||| ||||||||||  ||| ||||||||||| ||||||||||||||||  ||||||||||||||| |||||| |||| ||||||| |||    
T  11278 aaaactcaataattaaccataaacct-aaatttcccaattctctcataaacctgttaaaatcaaaatcagaattcattaactacactattgaagcaaacc 11180  T
Q  226 tcacccttaccttaatt 242  Q
    |||||||||||||||||    
T  11179 tcacccttaccttaatt 11163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 160890 - 160797
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    ||||||||||| |||||||||||| |||||||||||||||||||| || ||| |||||||||||||| |||||||||||||||||||||||||||    
T  160890 tcccaaaaatcccattttccttccattcactccccaaatcagttt-cagatgaaaaactaagtactgcctacaaccagaacctaattctaacatc 160797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 160724 - 160663
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||||| || ||||||||||||||    
T  160724 ctgttaaacacaaaatcagaatt-aataactatactattgaagcaaacttcacccttacctta 160663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 26 - 246
Target Start/End: Complemental strand, 4742 - 4523
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    ||||||||||||||||||||||| || | |||  || |  ||| | ||  ||||||||| ||||||||||  |  ||  ||||||| ||||||||||| |    
T  4742 ttcactccccaaatcagtttacagatatgaaatgaaatgttgtatgcactcagaacctatttctaacatcaaaccagtgatttctacactcaattcaccc 4643  T
Q  126 aaaaacccataattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagac 224  Q
    ||||||| | |||||| | ||||||| ||||| ||||||| ||| ||||||| ||||||||| |||||||||||| || | | |||||||||||||| ||    
T  4642 aaaaaccaagaattcaacttaaaccc-aaaatccccaatttctaccataaacatgttaaatc-aaaatcagaattaaaaatcgatactactgaagcaaac 4545  T
Q  225 ctcacccttaccttaattcaga 246  Q
    ||||||||||||||||||||||    
T  4544 ctcacccttaccttaattcaga 4523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 26 - 246
Target Start/End: Complemental strand, 19924 - 19705
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    ||||||||||||||||||||||| || | |||  || |  ||| | ||  ||||||||| ||||||||||  |  ||  ||||||| ||||||||||| |    
T  19924 ttcactccccaaatcagtttacagatatgaaatgaaatgttgtatgcactcagaacctatttctaacatcaaaccagtgatttctacactcaattcaccc 19825  T
Q  126 aaaaacccataattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagac 224  Q
    ||||||| | |||||| | ||||||| ||||| ||||||| ||| ||||||| ||||||||| |||||||||||| || | | |||||||||||||| ||    
T  19824 aaaaaccaagaattcaacttaaaccc-aaaatccccaatttctaccataaacatgttaaatc-aaaatcagaattaaaaatcgatactactgaagcaaac 19727  T
Q  225 ctcacccttaccttaattcaga 246  Q
    ||||||||||||||||||||||    
T  19726 ctcacccttaccttaattcaga 19705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 246
Target Start/End: Original strand, 4012 - 4246
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaata 101  Q
    |||||||||| ||||||||| |  |||||||||||||| |||||||| ||| ||||||||||||||| | |||||||||||||||||||||||| ||| |    
T  4012 cccaaaaatcccattttcctccaattcactccccaaattagtttacagatgcaaaactaagtactgtatgcaaccagaacctaattctaacatcagaaca 4111  T
Q  102 gcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattc 200  Q
     |||| ||||         ||| ||||   | |||||||| |||||| || |||||   ||||| ||| || |||| |||||||   |||||||||||||    
T  4112 acaatctcta---------cacccaaacctcaataattcatcataaa-cctaaaatggtcaattcctacca-aaacttgttaaacttaaaatcagaattc 4200  T
Q  201 aataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    |||||||| |||| ||||||| ||||||||||||||||||||||||    
T  4201 aataactacactattgaagcaaacctcacccttaccttaattcaga 4246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 246
Target Start/End: Original strand, 26389 - 26622
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaata 101  Q
    ||||| |||| ||||||||| |  |||||||||||||| |||||||| ||| ||||||||||||||| | |||||| ||||||||||||||||| ||| |    
T  26389 cccaagaatcccattttcctccaattcactccccaaattagtttacagatgcaaaactaagtactgtatgcaaccataacctaattctaacatcagaaca 26488  T
Q  102 gcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattc 200  Q
     |||| ||||         ||| ||||   | |||||||| |||||| || ||||||||||||| ||| || |||| ||||||| | |||||||||||||    
T  26489 acaatctcta---------cacccaaacctcaataattcatcataaa-cctaaaattcccaattcctacca-aaacttgttaaacctaaaatcagaattc 26577  T
Q  201 aataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    |||||||| |||| ||||||| ||| ||||||||||||||||||||    
T  26578 aataactacactattgaagcaaacc-cacccttaccttaattcaga 26622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 114 - 239
Target Start/End: Original strand, 45104 - 45228
Alignment:
Q  114 ctcaattcactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatacta 213  Q
    |||||||||||||||| ||||||| ||| ||||||||| |||||| ||||||||  ||||||| ||||| |  |||||||||||||||||| ||| ||||    
T  45104 ctcaattcactcaaaa-cccataaatcaacataaaccccaaaatttccaattctcacataaacttgttagaatcaaaatcagaattcaatatctacacta 45202  T
Q  214 ctgaagcagacctcacccttacctta 239  Q
    |||||||| |||||||||||||||||    
T  45203 ctgaagcaaacctcacccttacctta 45228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 114 - 239
Target Start/End: Complemental strand, 43380 - 43255
Alignment:
Q  114 ctcaattcactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatacta 213  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||||  || ||||||||||||   |||||||||||| |  ||||| ||||    
T  43380 ctcaattcactcaaaaacccataattcaacataaaccccaaaattcccaattctcacaaaaacctgttaaaataaaaatcagaatttatcaactacacta 43281  T
Q  214 ctgaagcagacctcacccttacctta 239  Q
     ||||| | |||||||||||||||||    
T  43280 ttgaagtaaacctcacccttacctta 43255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 114 - 239
Target Start/End: Complemental strand, 48446 - 48321
Alignment:
Q  114 ctcaattcactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatacta 213  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||||  || ||||||||||||   |||||||||||| |  ||||| ||||    
T  48446 ctcaattcactcaaaaacccataattcaacataaaccccaaaattcccaattctcacaaaaacctgttaaaataaaaatcagaatttatcaactacacta 48347  T
Q  214 ctgaagcagacctcacccttacctta 239  Q
     ||||| | |||||||||||||||||    
T  48346 ttgaagtaaacctcacccttacctta 48321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0402 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 76 - 246
Target Start/End: Original strand, 15800 - 15970
Alignment:
Q  76 cagaacctaattctaacatctgaatagcaatttctatactcaattcactcaaaaacccat-aattcaccataaacccgaaaattcccaatt-ctatcata 173  Q
    ||||||||| ||||||||||  |  ||  ||| ||| ||||||||||| ||||||||||  |||||| ||||||||| ||||| ||||||| ||| ||||    
T  15800 cagaacctatttctaacatcaaaccagtgattcctacactcaattcacccaaaaacccaagaattcaacataaaccc-aaaatccccaatttctaccata 15898  T
Q  174 aacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||||| |||||||||||||| ||   |||||||||||||||| ||||||||||||||||||||||||    
T  15899 aacctgttaaa-ccaaaatcagaattaaacctctatactactgaagcaaacctcacccttaccttaattcaga 15970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 204
Target Start/End: Complemental strand, 55296 - 55117
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    ||||||||||||||||||||||| |||| |||  || |  ||| | ||||||||||||| |||||||| |  || || ||| |||| |||||||||||||    
T  55296 ttcactccccaaatcagtttacagatgtgaaatgaaatgttgtatgcaaccagaacctatttctaacagcaaaacagtaatctctacactcaattcactc 55197  T
Q  126 aaaaaccc-ataattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattcaata 204  Q
    |||||||| |||||||| ||||||||| ||||| ||||||| ||| ||  |||||||||||| ||||||||||||||||||    
T  55196 aaaaacccaataattcaacataaacccaaaaatccccaattcctaccaataacctgttaaat-caaaatcagaattcaata 55117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 28 - 239
Target Start/End: Original strand, 321891 - 322092
Alignment:
Q  28 cactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactcaa 127  Q
    ||||||||||||||||||||| |||  ||||||||| |||| | |||||||||||||||||||||||| |||| ||||| ||||         | |||||    
T  321891 cactccccaaatcagtttacagatgctaaactaagtgctgtatgcaaccagaacctaattctaacatcagaatcgcaatctcta---------ctctcaa 321981  T
Q  128 aaacccataattcaccataaacccgaaaattcccaa-ttctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacct 226  Q
    || ||  || ||||  ||||| || ||||||||||| ||||| || ||||||||||||  |||||||||||||||||| |||||||| ||||||| ||||    
T  321982 aacccattatttcaatataaa-cctaaaattcccaatttctacca-aaacctgttaaactcaaaatcagaattcaatatctatactaatgaagcaaacct 322079  T
Q  227 cacccttacctta 239  Q
    |||||||||||||    
T  322080 cacccttacctta 322092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 236
Target Start/End: Original strand, 327579 - 327777
Alignment:
Q  28 cactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactcaa 127  Q
    ||||||||||||||||||||| |||  ||||||||| |||| | |||||||||||||||||||||||| |||| ||||| ||||         | |||||    
T  327579 cactccccaaatcagtttacagatgctaaactaagtgctgtatgcaaccagaacctaattctaacatcagaatcgcaatctcta---------ctctcaa 327669  T
Q  128 aaacccataattcaccataaacccgaaaattcccaa-ttctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacct 226  Q
    ||  |  || |||| |||||| || ||||||||||| ||||| || |||||| |||||  ||||||||||||| |||| |||||||| ||||||| ||||    
T  327670 aactcattatttcaacataaa-cctaaaattcccaatttctacca-aaacctattaaactcaaaatcagaatttaatatctatactaatgaagcaaacct 327767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 76 - 239
Target Start/End: Original strand, 371251 - 371414
Alignment:
Q  76 cagaacctaattctaacatctgaatagcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaa 175  Q
    ||||||||| |||||||||| ||| | ||||| ||| ||||||||||  |||||||| | |||||| ||||||||| |||||||||||||||  ||||||    
T  371251 cagaacctatttctaacatcagaacaacaattcctacactcaattcatccaaaaacctagaattcaacataaaccccaaaattcccaattctcacataaa 371350  T
Q  176 cctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    | |||||||  ||||||||||||| |  ||||| | || ||||| | |||||||||||||||||    
T  371351 cttgttaaaatcaaaatcagaatttatcaactacattattgaagtaaacctcacccttacctta 371414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1584 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold1584
Description:

Target: scaffold1584; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 127 - 244
Target Start/End: Original strand, 1236 - 1353
Alignment:
Q  127 aaaacccat-aattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacc 225  Q
    ||||||||| |||||| ||||||||| ||| ||||||||||||||||||||||||||||   ||||||||||| ||||| |||||||||||||| | | |    
T  1236 aaaacccattaattcatcataaaccc-aaatttcccaattctatcataaacctgttaaaattaaaatcagaatccaatatctatactactgaagtaaaac 1334  T
Q  226 tcacccttaccttaattca 244  Q
    |||||||||||||||||||    
T  1335 tcacccttaccttaattca 1353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 153 - 246
Target Start/End: Complemental strand, 26862 - 26769
Alignment:
Q  153 aaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||| ||||||||||||||||||||||||  |||||| |||||||| |||||| |||| ||||||| ||||||||||||||||||||||||    
T  26862 aaaattctcaattctatcataaacctgttaaaatcaaaattagaattcattaactacactattgaagcaaacctcacccttaccttaattcaga 26769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 121 - 239
Target Start/End: Original strand, 11270 - 11387
Alignment:
Q  121 cactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagc 220  Q
    ||||||||| ||||||||||||||||||||  |||||||||||||||| |||||||||||||||  ||||||||||||| || | ||| |||| ||| |     
T  11270 cactcaaaaccccataattcaccataaacct-aaaattcccaattctaacataaacctgttaaaatcaaaatcagaattaaaaatctacactattgatgt 11368  T
Q  221 agacctcacccttacctta 239  Q
    | |||||||||||||||||    
T  11369 aaacctcacccttacctta 11387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 157 - 239
Target Start/End: Original strand, 72033 - 72115
Alignment:
Q  157 ttcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||||||||||||| ||||||  |||||||||||||||||| |||||||| ||||||| |||||||||||||||||    
T  72033 ttcccaattctatcataaaccggttaaaatcaaaatcagaattcaatatctatactaatgaagcaaacctcacccttacctta 72115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 246
Target Start/End: Original strand, 77593 - 77765
Alignment:
Q  75 ccagaacctaattctaacatctgaatagcaatttctatactcaattcactcaaaaaccca-taattcaccataaacccgaaaattcccaatt-ctatcat 172  Q
    |||||||||| ||||||||||  || | |||| |||| |||||||||| ||||||||||| ||||||| | ||||||| || || ||||||| ||| ||     
T  77593 ccagaacctatttctaacatcaaaacaacaatctctacactcaattcagtcaaaaacccaataattcatcctaaaccc-aacatccccaatttctaccaa 77691  T
Q  173 aaacctgttaaatccaaaatcagaa-ttcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
     ||||||||||||| |||||||||| ||||| | |||| ||||||||||| ||||||||||||||||||||||||    
T  77692 taacctgttaaatc-aaaatcagaaattcaaaatctattctactgaagcaaacctcacccttaccttaattcaga 77765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 135 - 244
Target Start/End: Complemental strand, 5155 - 5047
Alignment:
Q  135 taattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcaccctta 234  Q
    ||||||| ||||||||| ||  ||||||||||||||||||||||||||||  |||||||||||| ||||| |||||||||||||| | |  |||||||||    
T  5155 taattcatcataaaccc-aattttcccaattctatcataaacctgttaaaatcaaaatcagaatccaatatctatactactgaagtaaaattcaccctta 5057  T
Q  235 ccttaattca 244  Q
    ||||||||||    
T  5056 ccttaattca 5047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 114 - 236
Target Start/End: Original strand, 3228 - 3346
Alignment:
Q  114 ctcaattcactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatacta 213  Q
    ||||||||||||| ||| |||||| ||| ||||||||| ||    |||||||||  ||||||| |||||||  |||||||||||||||||| ||||||||    
T  3228 ctcaattcactcagaaatccataaatcaacataaaccccaa----cccaattctcgcataaacttgttaaaatcaaaatcagaattcaatatctatacta 3323  T
Q  214 ctgaagcagacctcacccttacc 236  Q
    |||||||| ||||||||||||||    
T  3324 ctgaagcaaacctcacccttacc 3346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 246
Target Start/End: Original strand, 1334 - 1568
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaata 101  Q
    |||||||||| ||||||| | |  ||||||| |||||| |||||||| |||||||||||||| || | | ||||||||||||||||||||||   ||| |    
T  1334 cccaaaaatcccattttcgtccaattcactctccaaattagtttacaaatgtaaaactaagtgctatatgcaaccagaacctaattctaacactagaaca 1433  T
Q  102 gcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattc 200  Q
     |||| ||||         ||| ||||| || |||||||| |||||| || ||||||||||||| ||| || |||| |||||||  || |||||||||      
T  1434 acaatctcta---------cacccaaaacccaataattcatcataaa-cctaaaattcccaattcctacca-aaacttgttaaactcagaatcagaatca 1522  T
Q  201 aataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    || | |||||||||||||||| ||||||||||||||||||||||||    
T  1523 aacatctatactactgaagcaaacctcacccttaccttaattcaga 1568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 240
Target Start/End: Original strand, 11215 - 11442
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaata 101  Q
    |||||||||| |||||||||    |||||||||||||| |||||||| ||| ||||||||||  ||| | |||| ||||||||||||||||||| ||| |    
T  11215 cccaaaaatcccattttcctcaaattcactccccaaattagtttacagatgcaaaactaagtgttgtatgcaactagaacctaattctaacatcagaaca 11314  T
Q  102 gcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattc 200  Q
     |||| ||||         ||| ||||| || |||||||| ||||||||   |||| ||||||| ||| || |||| ||||||| |||||||||||||||    
T  11315 acaatctcta---------cacccaaaacccaataattcatcataaacc--taaatccccaattcctacca-aaacttgttaaacccaaaatcagaattc 11402  T
Q  201 aataactatactactgaagcagacctcacccttaccttaa 240  Q
    | |||| | |||| ||||||| ||||||||||||||||||    
T  11403 attaaccacactattgaagcaaacctcacccttaccttaa 11442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 79 - 239
Target Start/End: Original strand, 7796 - 7956
Alignment:
Q  79 aacctaattctaacatctgaatagcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacct 178  Q
    |||||| |||||||||| ||| | ||||| ||| ||||||||||| |||||||| | |||||| ||||||||  ||||||||||||||   |||||||||    
T  7796 aacctatttctaacatcagaacaacaattcctacactcaattcacccaaaaacctagaattcaacataaaccttaaaattcccaattcccacataaacct 7895  T
Q  179 gttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||  |||||| |||||| |  ||||| |||| ||||| | ||| |||||||||||||    
T  7896 gttaaaatcaaaataagaatttatcaactacactattgaagtaaaccacacccttacctta 7956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 246
Target Start/End: Original strand, 1207 - 1439
Alignment:
Q  4 caaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagc 103  Q
    |||||||| |||||||||    |||||||||||||| ||||| || ||  ||||||||||  ||| | |||||||||||||||||||||||| ||| |||    
T  1207 caaaaatcccattttcctcaaattcactccccaaattagtttgcagatacaaaactaagtgatgtatgcaaccagaacctaattctaacatcagaacagc 1306  T
Q  104 aatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattcaa 202  Q
    ||| ||||         |||||||||  | |||||||  ||  ||||  ||||| ||||||| ||| || || | ||||||| |||||||||||||||||    
T  1307 aatctcta---------cactcaaaactcaataattcgtcaataacct-aaaatccccaatttctaccaaaagcttgttaaa-ccaaaatcagaattcaa 1395  T
Q  203 taactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    |||||| |||| ||||||| ||||||||||||||||||||||||    
T  1396 taactacactattgaagcaaacctcacccttaccttaattcaga 1439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 136 - 246
Target Start/End: Complemental strand, 2175 - 2067
Alignment:
Q  136 aattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcaccctta 234  Q
    |||||| ||||||||| ||||| ||||||| ||| ||||| | ||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  2175 aattcaacataaaccc-aaaatccccaatttctaccataa-cttgttaaa-ccaaaatcagaattcaatatctatactactgaagcaaacctcaccctta 2079  T
Q  235 ccttaattcaga 246  Q
    ||||||||||||    
T  2078 ccttaattcaga 2067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 171189 - 170961
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaat 100  Q
    ||||||||||| |||||||||    |||||||||||||| |||||||| |||  ||| |||||  | | | ||||||||||||||||||||||||  ||     
T  171189 tcccaaaaatcccattttcctcaaattcactccccaaattagtttacagatgctaaattaagtgttatatgcaaccagaacctaattctaacatcataac 171090  T
Q  101 agcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaatt 199  Q
      |||| ||||         | ||||||| ||  ||||||| ||||||||  ||||||||||||| ||| || ||||||||||||  |||||| ||||||    
T  171089 cacaatctcta---------ctctcaaaacccactaattcaacataaacct-aaaattcccaatttctacca-aaacctgttaaactcaaaattagaatt 171001  T
Q  200 caataactatactactgaagcagacctcacccttacctta 239  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  171000 caataactatactactgaagcaaacctcacccttacctta 170961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 114 - 246
Target Start/End: Complemental strand, 22038 - 21906
Alignment:
Q  114 ctcaattcactcaaaaacccat-aattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattcaataactatac 211  Q
    |||||||||| ||||||||||  |||||| |||||| || ||||| ||||||| ||| ||||||||||||||||| |||||||||||| || | ||| ||    
T  22038 ctcaattcacccaaaaacccaagaattcaacataaatcc-aaaatccccaatttctaccataaacctgttaaatc-aaaatcagaattaaacatctacac 21941  T
Q  212 tactgaagcagacctcacccttaccttaattcaga 246  Q
    |||||||| | ||||||||||||||||||||||||    
T  21940 tactgaagtaaacctcacccttaccttaattcaga 21906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 114 - 246
Target Start/End: Complemental strand, 26235 - 26103
Alignment:
Q  114 ctcaattcactcaaaaacccat-aattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattcaataactatac 211  Q
    |||||||||| ||||||||||  |||||| |||||| || ||||| ||||||| ||| ||||||||||||||||| |||||||||||| || | ||| ||    
T  26235 ctcaattcacccaaaaacccaagaattcaacataaatcc-aaaatccccaatttctaccataaacctgttaaatc-aaaatcagaattaaacatctacac 26138  T
Q  212 tactgaagcagacctcacccttaccttaattcaga 246  Q
    |||||||| | ||||||||||||||||||||||||    
T  26137 tactgaagtaaacctcacccttaccttaattcaga 26103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 246
Target Start/End: Complemental strand, 59806 - 59586
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    ||||||||||||||||| ||| |||| | |||  || |  ||| | ||| ||||||||| ||||||||||  |  ||  ||| ||| |||| |||||| |    
T  59806 ttcactccccaaatcaggttatatatatgaaatgaaatgttgtatgcaatcagaacctatttctaacatcaaaccagtgattcctacactctattcaccc 59707  T
Q  126 aaaaacccat-aattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcaga 223  Q
    ||||||| |  |||||| ||||||||| ||||| ||||||| ||| ||||||||||||||| |||||||||||||| || | ||| |||||||||| | |    
T  59706 aaaaaccaaagaattcaacataaaccc-aaaatccccaatttctaccataaacctgttaaa-ccaaaatcagaattaaaaatctacactactgaagtaaa 59609  T
Q  224 cctcacccttaccttaattcaga 246  Q
    |||||||||||||||||||||||    
T  59608 cctcacccttaccttaattcaga 59586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 61394 - 61150
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaat 100  Q
    |||||||||||||| ||||||    ||||||||||||||||||||||| || | |||  || |  ||| | ||| ||||||||| ||||||||||  |      
T  61394 tcccaaaaatctcaatttcctcaatttcactccccaaatcagtttacagatatgaaatgaaatgttgtatgcaatcagaacctatttctaacatcaaacc 61295  T
Q  101 agcaatttctatactcaattcactcaaaaacccat-aattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaat 198  Q
    ||  ||| ||| ||||||||||| |||||| | |  |||||| ||||||||| ||||| | ||||| ||| ||||||| ||||||| ||||||||| |||    
T  61294 agtgattcctacactcaattcacccaaaaagcaaagaattcaacataaaccc-aaaatcctcaatttctaccataaacttgttaaa-ccaaaatcataat 61197  T
Q  199 tcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    | || | ||| |||||||||| | |||||||| |||||||||||||||    
T  61196 taaaaatctacactactgaagtaaacctcacc-ttaccttaattcaga 61150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 246
Target Start/End: Original strand, 13633 - 13853
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatagcaatttctatactcaattcactc 125  Q
    |||||||||||| |||||||||| || | |||  || | |||| | ||  ||||||||| ||||||||||  |  ||  ||| ||| ||||||||||| |    
T  13633 ttcactccccaactcagtttacagatatgaaatgaaatgctgtatgcactcagaacctatttctaacatcaaaccagtgattcctacactcaattcaccc 13732  T
Q  126 aaaaac-ccataattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcaga 223  Q
    |||||  ||| |||||| | ||||||| ||||| || |||| ||| ||||||||||||||||| |||||||||||| || | ||| |||||||||||| |    
T  13733 aaaaaaaccagaattcaacttaaaccc-aaaatccctaatttctaccataaacctgttaaatc-aaaatcagaattaaacatctacactactgaagcaaa 13830  T
Q  224 cctcacccttaccttaattcaga 246  Q
    |||||||||||||||||||||||    
T  13831 cctcacccttaccttaattcaga 13853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0583 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 282 - 371
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattcta 90  Q
    |||| |||||| |||||| ||||  |||||||||||||| |||||||| ||||||||||||||  |||||||||||||||||||||||||    
T  282 tccccaaaatcccatttttcttcaattcactccccaaattagtttacagatgtaaaactaagtgatgtctacaaccagaacctaattcta 371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0583; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 239
Target Start/End: Original strand, 426 - 511
Alignment:
Q  155 aattcccaattctatcataaacctgttaaa-tccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    |||||||||||||  |  ||| |||||||| || ||||||| || | |||||||| |||| ||||||| |||||||||||||||||    
T  426 aattcccaattctcaccaaaatctgttaaactcaaaaatcataaattaataactacactattgaagcaaacctcacccttacctta 511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 54; Significance: 4e-22; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 121 - 246
Target Start/End: Complemental strand, 37935 - 37810
Alignment:
Q  121 cactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagc 220  Q
    ||||||||| || |||||||||||||||||  ||||||||||||| || || ||||||||||||  ||| ||||||||| | || ||| |||| |||||     
T  37935 cactcaaaacccaataattcaccataaacctaaaaattcccaattataacaaaaacctgttaaaatcaacatcagaattaagtatctacactattgaagt 37836  T
Q  221 agacctcacccttaccttaattcaga 246  Q
    | || |||||||||||||||||||||    
T  37835 aaacttcacccttaccttaattcaga 37810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 121 - 246
Target Start/End: Complemental strand, 135995 - 135871
Alignment:
Q  121 cactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagc 220  Q
    ||||||||| || |||||||||||||||||  ||||||||||||| || || ||||||||||||  ||| ||||||||| | || ||| |||| |||||     
T  135995 cactcaaaacccaataattcaccataaacct-aaaattcccaattataacaaaaacctgttaaaatcaacatcagaattaagtatctacactattgaagt 135897  T
Q  221 agacctcacccttaccttaattcaga 246  Q
    | || |||||||||||||||||||||    
T  135896 aaacttcacccttaccttaattcaga 135871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 244
Target Start/End: Original strand, 105216 - 105283
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattca 244  Q
    ||||||||  |||||||| || | || | |||||||||||||| | ||||||||||||||||||||||    
T  105216 ctgttaaactcaaaatcaaaaattaaaatctatactactgaagtaaacctcacccttaccttaattca 105283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 239
Target Start/End: Original strand, 26789 - 26906
Alignment:
Q  121 cactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagc 220  Q
    ||||||||| || |||||||||||||||||  ||||||||||||| || |||||||||||||||  ||||||||||||| |  | ||| |||| |||||     
T  26789 cactcaaaacccaataattcaccataaacct-aaaattcccaattataacataaacctgttaaaatcaaaatcagaattaaccatctacactattgaagt 26887  T
Q  221 agacctcacccttacctta 239  Q
    | |||||||||||||||||    
T  26888 aaacctcacccttacctta 26906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 51; Significance: 2e-20; HSPs: 3)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 239
Target Start/End: Complemental strand, 46026 - 45909
Alignment:
Q  121 cactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagc 220  Q
    ||||||||| || |||||||||||||||||| ||| |||||||||| | |||||||||||||||  ||||||||||||| |  | ||| |||| |||||     
T  46026 cactcaaaacccaataattcaccataaaccctaaa-ttcccaattccaacataaacctgttaaaatcaaaatcagaattaaccatctacactattgaagt 45928  T
Q  221 agacctcacccttacctta 239  Q
    | |||||||||||||||||    
T  45927 aaacctcacccttacctta 45909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 239
Target Start/End: Complemental strand, 50299 - 50182
Alignment:
Q  121 cactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagc 220  Q
    ||||||||| || |||||||||||||||||| ||| |||||||||| | |||||||||||||||  ||||||||||||| |  | ||| |||| |||||     
T  50299 cactcaaaacccaataattcaccataaaccctaaa-ttcccaattccaacataaacctgttaaaatcaaaatcagaattaaccatctacactattgaagt 50201  T
Q  221 agacctcacccttacctta 239  Q
    | |||||||||||||||||    
T  50200 aaacctcacccttacctta 50182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 246
Target Start/End: Original strand, 37080 - 37138
Alignment:
Q  187 caaaatcagaattcaataactatactactgaa-gcagacctcacccttaccttaattcaga 246  Q
    |||||||||||||||||  |||||||| |||| | | ||||||||||||||||||||||||    
T  37080 caaaatcagaattcaat--ctatactattgaaagtaaacctcacccttaccttaattcaga 37138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 16814 - 16704
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaat 100  Q
    |||| |||||| ||||||||| |  |||||||||||||| |||||||| ||| ||||||||||  ||| | |||||||||||||||||||||||| |||     
T  16814 tccccaaaatcccattttcctccaattcactccccaaattagtttacagatgcaaaactaagtgatgtatgcaaccagaacctaattctaacatcagaac 16715  T
Q  101 agcaatttcta 111  Q
    |||||| ||||    
T  16714 agcaatctcta 16704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 16652 - 16579
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    |||| |||||||  ||||||||||||   | | |||||||||||||||| ||||||| ||||||||||||||||    
T  16652 aaacttgttaaactcaaaatcagaatcagacatctatactactgaagcaaacctcacacttaccttaattcaga 16579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 173 - 239
Target Start/End: Original strand, 21132 - 21198
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||||| |||||||| || ||||||||||||||||||||||| |||||||||||||||||    
T  21132 aaacctgttaaattcaaaatcaaaactcaataactatactactgaagcaaacctcacccttacctta 21198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 154 - 246
Target Start/End: Original strand, 46456 - 46547
Alignment:
Q  154 aaattcccaattc-tatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||||||| || ||||||||| ||||| |||||||||||||| |||| |||||||||||||| | ||||||||||||||||||||||||    
T  46456 aaattcccaattcctaccataaacctattaaa-ccaaaatcagaatt-aatatctatactactgaagtaaacctcacccttaccttaattcaga 46547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 76 - 246
Target Start/End: Original strand, 2250 - 2420
Alignment:
Q  76 cagaacctaattctaacatctgaatagcaatttctatactcaattcactcaaaaacccat-aattcaccataaacccgaaaattcccaatt-ctatcata 173  Q
    ||||||||| ||||||||||  |  ||  ||| ||| ||||||||||| ||||||||||  |||||| | ||||||| ||||| | ||||| ||| ||||    
T  2250 cagaacctatttctaacatcaaaccagtgattcctacactcaattcacccaaaaacccaagaattcaacttaaaccc-aaaatcctcaatttctaccata 2348  T
Q  174 aacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||||| |||||||||||||| || | ||| |||||||||| | || |||||||||||||||||||||    
T  2349 aacctgttaaa-ccaaaatcagaattaaacatctacactactgaagtaaacatcacccttaccttaattcaga 2420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 97 - 170
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||||||  ||||||||||| |||| | |||||||||||||| | |||||||||||| |||| ||||||    
T  97 aaacctgttaaactcaaaatcagaaatcaacatctatactactgaagtaaacctcacccttaacttagttcaga 170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 41942 - 42034
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaaca 93  Q
    |||| |||||| |||||| ||||  |||||||||||||| |||| ||| ||||||||| ||||  ||||||||||||||||||||||||||||    
T  41942 tccccaaaatcccatttttcttcaattcactccccaaattagttaacagatgtaaaacaaagtgatgtctacaaccagaacctaattctaaca 42034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 239
Target Start/End: Original strand, 42086 - 42170
Alignment:
Q  155 aattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    |||||||||||||  |  ||||||||||||  |||| ||| || | |||||||| |||| ||||||| |||||||||||| ||||    
T  42086 aattcccaattctcaccaaaacctgttaaactcaaattcaaaaattaataactacactattgaagcaaacctcacccttagctta 42170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 134 - 244
Target Start/End: Original strand, 26946 - 27055
Alignment:
Q  134 ataattcaccataaacccgaaaattcccaattc-tatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcaccct 232  Q
    ||||| || ||||||||| |||||||||||||| || || || | ||||||| ||||||||||||||||||||||||| |||||||||| || ||| |||    
T  26946 ataatccaacataaaccc-aaaattcccaattcctaccaaaagcttgttaaa-ccaaaatcagaattcaataactatattactgaagcaaacttcatcct 27043  T
Q  233 taccttaattca 244  Q
    ||||||||||||    
T  27044 taccttaattca 27055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 134 - 244
Target Start/End: Original strand, 28328 - 28437
Alignment:
Q  134 ataattcaccataaacccgaaaattcccaattc-tatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcaccct 232  Q
    ||||| || ||||||||| |||||||||||||| || || || | ||||||| ||||||||||||||||||||||||| |||||||||| || ||| |||    
T  28328 ataatccaacataaaccc-aaaattcccaattcctaccaaaagcttgttaaa-ccaaaatcagaattcaataactatattactgaagcaaacttcatcct 28425  T
Q  233 taccttaattca 244  Q
    ||||||||||||    
T  28426 taccttaattca 28437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1032 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold1032
Description:

Target: scaffold1032; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 3011 - 2917
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    ||||||||||| ||||||||| |  |||||| ||||||| ||||||||  || ||||||||||||||| | |||||| |||||||||||||||||    
T  3011 tcccaaaaatcccattttcctccaattcactacccaaattagtttacaggtgcaaaactaagtactgtatgcaaccacaacctaattctaacatc 2917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 134 - 236
Target Start/End: Original strand, 7515 - 7616
Alignment:
Q  134 ataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcaccctt 233  Q
    |||||||||||||||||  |||||||||||||||| |||||||||||||||  ||||||||||||| |  | ||| |||| ||||| | |||||||||||    
T  7515 ataattcaccataaacct-aaaattcccaattctaacataaacctgttaaaatcaaaatcagaattaagcatctacactattgaagtaaacctcaccctt 7613  T
Q  234 acc 236  Q
    |||    
T  7614 acc 7616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 47; Significance: 6e-18; HSPs: 3)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 25576 - 25638
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||  ||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  25576 ctgttaaacacaaaatcagaatttaataactatactactgaagcaaacctcacccttacctta 25638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 36244 - 36306
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||  ||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  36244 ctgttaaacacaaaatcagaatttaataactatactactgaagcaaacctcacccttacctta 36306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 42651 - 42713
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||  ||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  42651 ctgttaaacacaaaatcagaatttaataactatactactgaagcaaacctcacccttacctta 42713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 246
Target Start/End: Original strand, 19298 - 19532
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaata 101  Q
    |||||||||| |||||||||    |||||||||||| | |||||||| ||| ||||||||||  ||| | |||||||||||||||||||||||| |||      
T  19298 cccaaaaatcacattttcctctaattcactccccaatttagtttacagatgcaaaactaagtgttgtatgcaaccagaacctaattctaacatcagaacc 19397  T
Q  102 gcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaa-ttctatcataaacctgttaaatccaaaatcagaattc 200  Q
     |||| ||||         ||| |||||  | |||||||| |||||| || | ||| ||||| ||||| || || | ||||||| ||||||||||||||     
T  19398 acaatctcta---------cacccaaaactcaataattcatcataaa-cctacaatccccaatttctaccaaaagcttgttaaa-ccaaaatcagaattt 19486  T
Q  201 aataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    |||||||| |||| ||||||| |||| ||||||||||||| |||||    
T  19487 aataactacactattgaagcaaacctgacccttaccttaaatcaga 19532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1853 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold1853
Description:

Target: scaffold1853; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 229
Target Start/End: Complemental strand, 227 - 1
Alignment:
Q  3 ccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaatag 102  Q
    ||||||||| |||||||||    ||||||||||||||||||||||| || | |||  || |  ||| | ||  ||||| ||| ||||||||||  |  ||    
T  227 ccaaaaatcccattttcctaaatttcactccccaaatcagtttacagatatgaaatgaaatgatgtatgcactcagaatctatttctaacatcaaaccag 128  T
Q  103 caatttctatactcaattcactcaaaaacccat-aattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattc 200  Q
      ||| ||| ||||||||||| |||||||| |  |||||| | ||||||| ||||| ||||||| ||| ||||||||||||||| ||||||||||||||     
T  127 tgattactacactcaattcacccaaaaaccaaagaattcaacttaaaccc-aaaatccccaatttctaccataaacctgttaaa-ccaaaatcagaatta 30  T
Q  201 aataactatactactgaagcagacctcac 229  Q
    || | |||||||||||||||| |||||||    
T  29 aaaatctatactactgaagcaaacctcac 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 45; Significance: 9e-17; HSPs: 4)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 254290 - 254378
Alignment:
Q  7 aaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    |||||||||||| | ||  |||||||||||||| | |||||| ||| ||||||||||  ||||||||||||||| ||||||||||||||    
T  254290 aaatctcatttttcctcaattcactccccaaattaatttacagatgcaaaactaagtgttgtctacaaccagaagctaattctaacatc 254378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 247772 - 247866
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    ||||||||||| |||||| | ||  |||||||||||||| | |||||| ||| ||||||||||  |||||||||||| || ||||||||||||||    
T  247772 tcccaaaaatcccatttttcctcaattcactccccaaattaatttacagatgcaaaactaagtgttgtctacaaccaaaagctaattctaacatc 247866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 240
Target Start/End: Original strand, 254430 - 254514
Alignment:
Q  157 ttcccaattct-atcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaa 240  Q
    ||||||||||| | || ||||||||||||  ||||||||||| | || | |||||||||||||||| ||||||||||||||||||    
T  254430 ttcccaattctcaccaaaaacctgttaaactcaaaatcagaaattaacatctatactactgaagcaaacctcacccttaccttaa 254514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 240
Target Start/End: Original strand, 247918 - 248002
Alignment:
Q  157 ttcccaattct-atcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaa 240  Q
    ||||||||||| | || ||||||||||||  ||||||||||| | || | |||||||||||||||| |||||||||||| |||||    
T  247918 ttcccaattctcaccaaaaacctgttaaactcaaaatcagaaattaacatctatactactgaagcaaacctcacccttatcttaa 248002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0323 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 239
Target Start/End: Original strand, 8163 - 8275
Alignment:
Q  127 aaaaccca-taattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagac 224  Q
    |||||||| ||||||| ||||||||  ||||| ||||||| |||||| ||||||||||||  |||||||||||||||  | |||||||| ||||||| ||    
T  8163 aaaacccactaattcaacataaacct-aaaatccccaatttctatca-aaacctgttaaactcaaaatcagaattcagaatctatactaatgaagcaaac 8260  T
Q  225 ctcacccttacctta 239  Q
    |||||||||||||||    
T  8261 ctcacccttacctta 8275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 1658 - 1712
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaa 55  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||    
T  1658 tcccaaaaatctcatttttcttccattcactccccaaatcagtttacagatgtaa 1712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 1782 - 1886
Alignment:
Q  136 aattcaccataaacccgaaaattcccaattct-atcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcaccctta 234  Q
    |||||| |||||| ||  ||| |||||||||| | || ||| |||||| || |||| || ||| |||||||||| |||| ||||| | ||||||||||||    
T  1782 aattcaacataaaaccccaaaatcccaattctcaccaaaaatctgttagattcaaattcggaaatcaataactacactattgaagtaaacctcaccctta 1881  T
Q  235 cctta 239  Q
    |||||    
T  1882 cctta 1886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 246
Target Start/End: Original strand, 3675 - 3909
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatctgaata 101  Q
    |||||||||| |||||||||    |||||||||||||| |||||||| |||  ||||||||| || | | |||||||||||||||||||||||| |||      
T  3675 cccaaaaatcccattttcctcaaattcactccccaaattagtttacagatgctaaactaagtgctatatgcaaccagaacctaattctaacatcagaacc 3774  T
Q  102 gcaatttctatactcaattcactcaaaaacccataattcaccataaacccgaaaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattc 200  Q
     |||| ||||         ||| |||||  | |||||||| ||||||||  ||||  || |||| ||| || || | ||||||  ||||||||||||||     
T  3775 acaatctcta---------cacccaaaactcaataattcatcataaacct-aaaacccctaatttctaccaaaagcttgttaag-ccaaaatcagaatta 3863  T
Q  201 aataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    |||||||| |||| ||||||| |||||||| |||||||||||||||    
T  3864 aataactacactattgaagcaaacctcaccattaccttaattcaga 3909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 3)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 246
Target Start/End: Original strand, 777 - 837
Alignment:
Q  186 ccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    |||||||||||||| || | |||||||||||||| | ||||||||||||||||||||||||    
T  777 ccaaaatcagaatttaaaatctatactactgaagtatacctcacccttaccttaattcaga 837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 246
Target Start/End: Original strand, 14586 - 14646
Alignment:
Q  186 ccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    |||||||||||||| || | ||||| |||||||| | ||||||||||||||||||||||||    
T  14586 ccaaaatcagaatttaaaatctatattactgaagtaaacctcacccttaccttaattcaga 14646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 14402 - 14496
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    ||||||||||| || ||||||    |||||||||||||| |||||||| ||||| |  ||| | |||| | ||||||||||||| ||||||||||    
T  14402 tcccaaaaatcccaatttcctcaatttcactccccaaattagtttacagatgtatacgtaaatgctgtatgcaaccagaacctatttctaacatc 14496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 178 - 246
Target Start/End: Original strand, 2258 - 2326
Alignment:
Q  178 tgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||| |||||||||||||| |||| ||| |||||||||| | || |||||||||||||||||||||    
T  2258 tgttaaacccaaaatcagaattaaatatctacactactgaagtaaacatcacccttaccttaattcaga 2326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 95
Target Start/End: Original strand, 2117 - 2186
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    |||||||||||||| |||||||| ||| ||||||||||  ||| | |||| |||||||||||||||||||    
T  2117 ttcactccccaaattagtttacagatgcaaaactaagtgttgtatgcaactagaacctaattctaacatc 2186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 240
Target Start/End: Original strand, 2200 - 2263
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaa 240  Q
    ||||||||  ||||||||||| |||||||||||| |||||||| | ||||||||||||||||||    
T  2200 ctgttaaacacaaaatcagaaatcaataactatattactgaagaaaacctcacccttaccttaa 2263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 2033 - 2124
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaac 92  Q
    |||| |||||| |||||| |||||  |||||||||||||||||||||| ||| | ||||||||  | | | ||||||||| |||||||||||    
T  2033 tccccaaaatcccatttttcttccaatcactccccaaatcagtttacagatgcataactaagtgttctatgcaaccagaaactaattctaac 2124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 10677 - 10744
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaa 240  Q
    ||||||||||||  ||||||||||||| || | |||||||||||||| | ||||||||||||||||||    
T  10677 aaacctgttaaactcaaaatcagaatttaaaatctatactactgaagtaaacctcacccttaccttaa 10744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 239
Target Start/End: Complemental strand, 2631 - 2514
Alignment:
Q  121 cactcaaaaacccataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagc 220  Q
    ||||||||| || ||||| |||| ||||||  |||||| ||||||||| || ||||||||||||  |||||||||||||||  | ||| || | |||||     
T  2631 cactcaaaacccaataatccaccttaaacct-aaaatttccaattctaacaaaaacctgttaaaatcaaaatcagaattcagaatctacacaattgaagt 2533  T
Q  221 agacctcacccttacctta 239  Q
    | |||||||||||||||||    
T  2532 aaacctcacccttacctta 2514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 12019 - 12081
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||| ||||||||||| |||||||||| |||| ||||| | |||||||||||||||||    
T  12019 ctgttaaattcaaaatcagaaatcaataactacactattgaagtaaacctcacccttacctta 12081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 11853 - 11900
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| |||||| ||||| |||||||||||||||||||||||    
T  11853 tcccaaaaatcgcatttttcttccattcactccccaaatcagtttaca 11900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0457 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 239
Target Start/End: Complemental strand, 11461 - 11395
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||||| |||||||||||||||||||||| | |  ||||| | |||||||||||||||||    
T  11461 aaacctgttaaatacaaaatcagaattcaataactacattcttgaagtaaacctcacccttacctta 11395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0457; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 11623 - 11576
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| |||||| |||||  ||||||||||||||||||||||    
T  11623 tcccaaaaatcccatttttcttccaatcactccccaaatcagtttaca 11576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0560 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0560
Description:

Target: scaffold0560; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 250 - 181
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||| ||||||||||||| | |||||||| |||| | ||| | ||||||||||||||||||||||||    
T  250 ctgttaactccaaaatcagaaattaataactacactattaaagtaaacctcacccttaccttaattcaga 181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0560; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 412 - 362
Alignment:
Q  6 aaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaa 56  Q
    |||||| |||||| ||||| ||||||||||||||||||||||| |||||||    
T  412 aaaatcccatttttcttccattcactccccaaatcagtttacagatgtaaa 362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 38; Significance: 0.000000000001; HSPs: 3)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 199
Target Start/End: Complemental strand, 1258 - 1194
Alignment:
Q  134 ataattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaatt 199  Q
    |||||||||||||||||| ||| |||||||||| | |||||||||||||||  |||||||||||||    
T  1258 ataattcaccataaaccctaaa-ttcccaattccaacataaacctgttaaaatcaaaatcagaatt 1194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 14735 - 14654
Alignment:
Q  158 tcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    |||||||||| ||||||||||||||||  |||||||||||||||  | |||||| | || || | |||||||||||||||||    
T  14735 tcccaattctctcataaacctgttaaaaacaaaatcagaattcagaacctatacaattgcagtaaacctcacccttacctta 14654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 201
Target Start/End: Complemental strand, 3989 - 3946
Alignment:
Q  158 tcccaattctatcataaacctgttaaatccaaaatcagaattca 201  Q
    |||||||||| ||||||||||||||||  |||||||||||||||    
T  3989 tcccaattctctcataaacctgttaaaaacaaaatcagaattca 3946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 38; Significance: 0.000000000001; HSPs: 3)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 13720 - 13639
Alignment:
Q  158 tcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    |||||||||| ||||||||||||||||  |||||||||||||||  | |||||| | || || | |||||||||||||||||    
T  13720 tcccaattctctcataaacctgttaaaaacaaaatcagaattcagaacctatacaattgcagtaaacctcacccttacctta 13639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 6584 - 6537
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| ||||||||| |  |||||||||||||||||||||||    
T  6584 tcccaaaaatcccattttcctccaattcactccccaaatcagtttaca 6537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 13867 - 13820
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| ||||||||| |  |||||||||||||||||||||||    
T  13867 tcccaaaaatcccattttcctccaattcactccccaaatcagtttaca 13820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 17654 - 17581
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    |||||||||||| ||||||||||| || || | ||| |||| ||||| | ||||||||||||||||||||||||    
T  17654 aaacctgttaaaaccaaaatcagactttaaaatctacactaatgaagtaaacctcacccttaccttaattcaga 17581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 48
Target Start/End: Complemental strand, 17811 - 17768
Alignment:
Q  5 aaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||| ||||||||||||  ||||||||||||||||||||||    
T  17811 aaaaatcccattttccttccaatcactccccaaatcagtttaca 17768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 246
Target Start/End: Original strand, 32509 - 32570
Alignment:
Q  185 tccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||||||| | |||||||| |||| ||||| | ||||||||||||||||||||||||    
T  32509 tccaaaatcagaaattaataactacactattgaagtaaacctcacccttaccttaattcaga 32570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 32339 - 32389
Alignment:
Q  6 aaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaa 56  Q
    |||||| |||||| ||||| ||||||||||||||||||||||| |||||||    
T  32339 aaaatcccatttttcttccattcactccccaaatcagtttacagatgtaaa 32389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1026 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1026
Description:

Target: scaffold1026; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 16 - 63
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  16 tcccaaaaatcccattttccttccaatcactccccaaatcagtttaca 63  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 7115 - 7068
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  7115 tcccaaaaatcccattttccttccaatcactccccaaatcagtttaca 7068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 6953 - 6880
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||||||  |||||| ||| || || | ||| |||| ||||| | ||||||||||||||||||||||||    
T  6953 aaacctgttaaactcaaaattagactttaaaatctacactattgaagtaaacctcacccttaccttaattcaga 6880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0518 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0518
Description:

Target: scaffold0518; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 8273 - 8320
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||||    
T  8273 tcccaaaaatctcattttcctccaattcactccccaaatcagtttaca 8320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0518; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 8421 - 8502
Alignment:
Q  158 tcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    |||||| ||| ||||||||||||||||  |||||||||||||||  | |||||| | ||  | | |||||||||||||||||    
T  8421 tcccaactctctcataaacctgttaaaatcaaaatcagaattcagaacctatacaattggggtaaacctcacccttacctta 8502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 16836 - 16883
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| |||||| ||||| |||||||||||||||||||||||    
T  16836 tcccaaaaatcccatttttcttccattcactccccaaatcagtttaca 16883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 246
Target Start/End: Original strand, 17036 - 17071
Alignment:
Q  211 ctactgaagcagacctcacccttaccttaattcaga 246  Q
    ||||||||||| ||||||||||||||||||||||||    
T  17036 ctactgaagcaaacctcacccttaccttaattcaga 17071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 95
Target Start/End: Original strand, 56689 - 56756
Alignment:
Q  28 cactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    ||||||||||||||||||||| |||  ||||||||| | || | ||||| ||||||||||||||||||    
T  56689 cactccccaaatcagtttacagatgctaaactaagtgccgtatgcaacccgaacctaattctaacatc 56756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 95
Target Start/End: Complemental strand, 27118 - 27051
Alignment:
Q  28 cactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    ||||||| ||||||||||||| |||  ||||||| |||||| | ||||||||||||||||||| ||||    
T  27118 cactcccgaaatcagtttacagatgctaaactaaatactgtatgcaaccagaacctaattctatcatc 27051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 36; Significance: 0.00000000002; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 14887 - 14816
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattca 244  Q
    ||||||||| ||  |||||||||||||  ||| |||||||||||||||| | |||||||||||| |||||||    
T  14887 aaacctgttcaactcaaaatcagaatttcatatctatactactgaagcaaaactcacccttaccataattca 14816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 5878 - 5805
Alignment:
Q  126 aaaaaccca-taattcaccataaacccgaaaattcccaattctatcataaacctgttaaatccaaaatcagaatt 199  Q
    ||||||||| ||||||||||||||||  ||||||||||||| || || ||||||||||||  |||||||||||||    
T  5878 aaaaacccaataattcaccataaacct-aaaattcccaattttaacaaaaacctgttaaaatcaaaatcagaatt 5805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 9323 - 9252
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaattca 244  Q
    ||||||||||||  ||||||||||| |  ||| |||||||||||||| | |  |||||||||||||||||||    
T  9323 aaacctgttaaactcaaaatcagaaattcatatctatactactgaagtaaaattcacccttaccttaattca 9252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 239
Target Start/End: Original strand, 983 - 1049
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||||  ||||||||||| | || | ||| |||||||||||| |||||||||||||||||    
T  983 aaacctgttaaactcaaaatcagaaattaacatctacactactgaagcaaacctcacccttacctta 1049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 239
Target Start/End: Complemental strand, 19740 - 19658
Alignment:
Q  157 ttcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||| ||| ||||||||||||||||  |||||||||||||||  | |||||| | || || | |||||||||||||||||    
T  19740 ttcccaactctttcataaacctgttaaaatcaaaatcagaattcagaatctatacaattgcagtaaacctcacccttacctta 19658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 152703 - 152634
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    ||||||||||||||||||||||| || | ||||||| |  ||| | |||||||||| || ||||||||||    
T  152703 ttcactccccaaatcagtttacagatatgaaactaaatgttgtatgcaaccagaacatatttctaacatc 152634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 35; Significance: 0.00000000009; HSPs: 4)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 265894 - 265940
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttac 47  Q
    ||||||||||||||||||||| |  ||||||||||||||||||||||    
T  265894 tcccaaaaatctcattttcctccaattcactccccaaatcagtttac 265940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 259479 - 259526
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| ||||||||| |  |||||||||||||||||||||||    
T  259479 tcccaaaaatcccattttcctccaattcactccccaaatcagtttaca 259526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 259626 - 259707
Alignment:
Q  158 tcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||  |||||||||||||||  |||||||||||||||  | |||||| | ||  | | |||||||||||||||||    
T  259626 tcccaattctcacataaacctgttaaaaacaaaatcagaattcagaacctatacaattgcggtaaacctcacccttacctta 259707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 266041 - 266122
Alignment:
Q  158 tcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||||||  |||||||||||||||  |||||||||||||||  | |||||| | ||  | | |||||||||||||||||    
T  266041 tcccaattctcacataaacctgttaaaaacaaaatcagaattcagaacctatacaattgcggtaaacctcacccttacctta 266122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 242
Target Start/End: Original strand, 10185 - 10274
Alignment:
Q  155 aattcccaattctatcataaacctgttaaatcca-aaatcagaattcaataactatactactgaagcagac-ctcacccttaccttaatt 242  Q
    |||||||||||| | ||||||||||||||||||| ||||||||||| || | ||| | ||| |||| | || ||||||||||||||||||    
T  10185 aattcccaattccaccataaacctgttaaatccataaatcagaattaaacatctacattaccgaagtaaactctcacccttaccttaatt 10274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 17921 - 17876
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagttta 46  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||    
T  17921 tcccaaaaatcccattttccttccaatcactccccaaatcagttta 17876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 46088 - 46019
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    ||||||||||||||||||||||| ||||  || |||||  ||| | ||||||||||||| ||||||||||    
T  46088 ttcactccccaaatcagtttacagatgtgtaattaagtgttgtatgcaaccagaacctatttctaacatc 46019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 72259 - 72190
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    ||||||||||||||||||||||| ||||  || |||||  ||| | ||||||||||||| ||||||||||    
T  72259 ttcactccccaaatcagtttacagatgtgtaattaagtgttgtatgcaaccagaacctatttctaacatc 72190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 27096 - 27188
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaaca 93  Q
    |||||||||||||| ||||||    ||||||||||||||||||||||| ||||  || ||| |  ||| |||||| ||||| |||||||||||    
T  27096 tcccaaaaatctcaatttcctcaatttcactccccaaatcagtttacagatgtgtaattaaatgatgtatacaactagaacataattctaaca 27188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 14617 - 14562
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaa 56  Q
    |||| |||||| |||||| ||||| ||||||||||||||| ||||||| |||||||    
T  14617 tccccaaaatcccatttttcttccattcactccccaaatcggtttacagatgtaaa 14562  T

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Target: scaffold0158 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 201
Target Start/End: Original strand, 15344 - 15387
Alignment:
Q  158 tcccaattctatcataaacctgttaaatccaaaatcagaattca 201  Q
    |||||||||| ||||||||||||||||  |||||||||||||||    
T  15344 tcccaattctctcataaacctgttaaaatcaaaatcagaattca 15387  T

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Target: scaffold0155 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 31586 - 31633
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| |||||| ||||  |||||||||||||||||||||||    
T  31586 tcccaaaaatcccatttttcttcaattcactccccaaatcagtttaca 31633  T

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Target: scaffold0118 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 8088 - 8155
Alignment:
Q  173 aaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaa 240  Q
    |||| |||||||  ||||||||||| | || | |||||||||||||| | ||||||||||||||||||    
T  8088 aaacatgttaaactcaaaatcagaaattaaaacctatactactgaagtaaacctcacccttaccttaa 8155  T

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Target: scaffold0103 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 20369 - 20416
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||||||||||||| |  |||||||||||||| ||||||||    
T  20369 tcccaaaaatctcattttcctccaattcactccccaaattagtttaca 20416  T

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Target: scaffold0103; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 23215 - 23168
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||||||||||||| |  |||||||||||||| ||||||||    
T  23215 tcccaaaaatctcattttcctccaattcactccccaaattagtttaca 23168  T

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Target: scaffold0097 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 95
Target Start/End: Original strand, 28669 - 28736
Alignment:
Q  28 cactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    ||||||||||||||||||||| || | ||||||| |  ||| | ||||||||||||| ||||||||||    
T  28669 cactccccaaatcagtttacaaatatgaaactaaatgatgtatgcaaccagaacctatttctaacatc 28736  T

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Target: scaffold0071 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 50340 - 50293
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||| ||||||||| |  |||||||||||||||||||||||    
T  50340 tcccaaaaatcccattttcctccaattcactccccaaatcagtttaca 50293  T

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Target: scaffold0019 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 240
Target Start/End: Original strand, 138006 - 138069
Alignment:
Q  177 ctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttaccttaa 240  Q
    ||||||||  ||||||||||| | || | ||| |||||||||||| ||||||||||||||||||    
T  138006 ctgttaaactcaaaatcagaaattaacatctacactactgaagcaaacctcacccttaccttaa 138069  T

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Target: scaffold0276 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 21480 - 21434
Alignment:
Q  2 cccaaaaatctcattttccttccgttcactccccaaatcagtttaca 48  Q
    ||||||||||||||||| || ||  ||||||||||||||||||||||    
T  21480 cccaaaaatctcatttttctcccaatcactccccaaatcagtttaca 21434  T

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Target: scaffold1726 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1726
Description:

Target: scaffold1726; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 1074 - 1163
Alignment:
Q  6 aaaatctcattttccttccgttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    |||||| ||||||||| |  |||||| |||||||  ||||||| ||| | |||| |||||| | | ||||||||| ||||||||||||||    
T  1074 aaaatcccattttcctccaattcactacccaaattggtttacagatgcagaacttagtactatatgcaaccagaaactaattctaacatc 1163  T

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Target: scaffold0395 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 246
Target Start/End: Complemental strand, 1416 - 1358
Alignment:
Q  187 caaaatcagaattcaataactatactactgaa-gcagacctcacccttaccttaattcaga 246  Q
    ||||||||||||||||||  ||||||| | || | ||||||||||||||||||||||||||    
T  1416 caaaatcagaattcaata--tatactattaaaagtagacctcacccttaccttaattcaga 1358  T

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Target: scaffold0335 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 246
Target Start/End: Complemental strand, 7719 - 7661
Alignment:
Q  187 caaaatcagaattcaataactatactactga-agcagacctcacccttaccttaattcaga 246  Q
    |||||||||||||||||  |||||||| ||| || | ||||||||||||||||||||||||    
T  7719 caaaatcagaattcaat--ctatactattgagagtaaacctcacccttaccttaattcaga 7661  T

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Target: scaffold0298 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 95
Target Start/End: Original strand, 19150 - 19219
Alignment:
Q  26 ttcactccccaaatcagtttacatatgtaaaactaagtactgtctacaaccagaacctaattctaacatc 95  Q
    |||||||| |||||||||||||| |||| |||  || |||||| ||||  ||||||||| ||||||||||    
T  19150 ttcactcctcaaatcagtttacagatgtgaaatgaaatactgtatacactcagaacctatttctaacatc 19219  T

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Target: scaffold0298; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 242
Target Start/End: Original strand, 19298 - 19371
Alignment:
Q  170 cataaacctgttaaatcca-aaatcagaattcaataactatactactgaagcagacctcacccttaccttaatt 242  Q
    ||||||||||||||||||| ||||||||||| || | ||| | ||| |||| | |||||||||||||| |||||    
T  19298 cataaacctgttaaatccataaatcagaattaaacatctacattaccgaagtaaacctcacccttaccgtaatt 19371  T

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Target: scaffold0121 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 242
Target Start/End: Original strand, 10215 - 10288
Alignment:
Q  170 cataaacctgttaaatcca-aaatcagaattcaataactatactactgaagcagacctcacccttaccttaatt 242  Q
    ||||||||||||||||||| ||||||||||| || | ||| | ||| |||| | | ||||||||||||||||||    
T  10215 cataaacctgttaaatccataaatcagaattaaacatctacattaccgaagtaaatctcacccttaccttaatt 10288  T

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Target: scaffold0101 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 6004 - 5923
Alignment:
Q  158 tcccaattctatcataaacctgttaaatccaaaatcagaattcaataactatactactgaagcagacctcacccttacctta 239  Q
    ||||||| || |||||||||||||| |  |||||||||||||||| | |||||| | ||  | | |||||||||||||||||    
T  6004 tcccaatactctcataaacctgttagaatcaaaatcagaattcaaaacctatacaattgcggtaaacctcacccttacctta 5923  T

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Target: scaffold0068 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 51252 - 51200
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgt 53  Q
    ||||||||||| |||||| ||||| ||||||||||||||  ||||||| ||||    
T  51252 tcccaaaaatcccatttttcttccattcactccccaaattggtttacagatgt 51200  T

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Target: scaffold0068; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 64700 - 64648
Alignment:
Q  1 tcccaaaaatctcattttccttccgttcactccccaaatcagtttacatatgt 53  Q
    ||||||||||| |||||| ||||| ||||||||||||||  ||||||| ||||    
T  64700 tcccaaaaatcccatttttcttccattcactccccaaattggtttacagatgt 64648  T

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Target: scaffold0026 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 246
Target Start/End: Original strand, 36514 - 36606
Alignment:
Q  154 aaattcccaatt-ctatcataaacctgttaaatccaaaatcagaattcaataa-ctatactactga-agcagacctcacccttaccttaattcaga 246  Q
    |||||||||||| ||| || |||| ||||||| ||||||||||||||  |||| |||||||| ||| || | ||||||||||||||||||||||||    
T  36514 aaattcccaatttctaccagaaacatgttaaa-ccaaaatcagaatt--ataatctatactaatgagagtaaacctcacccttaccttaattcaga 36606  T

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