View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8130_low_21 (Length: 239)
Name: NF8130_low_21
Description: NF8130
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8130_low_21 |
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Alignment Details
Target: chr2 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 37541670 - 37541890
Alignment:
| Q |
1 |
ccaaatggaggaaccacctgttgaatccatatccataatattgttgtaaccaaggtagagtgtgtaactaactgtgtactaatgtattaatatcaatatc |
100 |
Q |
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| T |
37541670 |
ccaaatggaggaaccacctgttgaatccatatccataatattgttgtaaccaaggtagagtgtgtaactaactgtgtactaatgtattaatatcaatatc |
37541769 |
T |
|
| Q |
101 |
agttgatggatagttagtaatagtgatgaaatagcgtgagaatataaaaatactatacatgtatcacataacataaaatatannnnnnnnnnnggtagat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
37541770 |
agttgatggatagttagtaatagtgatgaaatagcgtgagaatataaaaatactatacatgtatcacataacataaaatata-tattttttttggtagat |
37541868 |
T |
|
| Q |
201 |
acataacataaaatattattaa |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
37541869 |
acataacataaaatattattaa |
37541890 |
T |
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