View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8131_low_6 (Length: 354)
Name: NF8131_low_6
Description: NF8131
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8131_low_6 |
 |  |
|
| [»] scaffold0003 (1 HSPs) |
 |  |  |
|
| [»] scaffold0032 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr7 (Bit Score: 262; Significance: 1e-146; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 14 - 327
Target Start/End: Complemental strand, 22863028 - 22862715
Alignment:
| Q |
14 |
cattaaaatcaccaagaacacaccaagccgcttctccatgtaaaggaaacaaattagacaaagaatcccacaacacctgtcgccccctactatcacaagg |
113 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22863028 |
cattaaaatcaccaagaacacaccaagccgcttccccatgtaaaggaaacaaattagacaaagaatcccacaacacctgtcgccccctactatcacaaga |
22862929 |
T |
 |
| Q |
114 |
agcataaatattcgccaaacagaacacctcattatttgatacaaaggaacctttaacaatcaaacaataatcaatatttactgacaaccaaacatccaaa |
213 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||| |
|
|
| T |
22862928 |
agcataaatattcgccaaacagaacacctcattatttgttacaaaggagcctttaacaatcaaacaattatcaatatttactgacaaccagacatccaac |
22862829 |
T |
 |
| Q |
214 |
acagacggatcccacaccgtaataatacctcccgaagctccgactgaagctttaaatgagtaagccatcaaatcagccccccataaggagtgacacaaaa |
313 |
Q |
| |
|
||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
22862828 |
acagaaggatcccacaccgtaataatacctccagaagcaccgactgaagctttaaaggaataagccatcaaatcagccccccataaggagcgacacaaaa |
22862729 |
T |
 |
| Q |
314 |
actcatccaccacc |
327 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
22862728 |
actcatccaccacc |
22862715 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 10 - 327
Target Start/End: Original strand, 47556226 - 47556543
Alignment:
| Q |
10 |
acatcattaaaatcaccaagaacacaccaagccgcttctccatgtaaaggaaacaaattagacaaagaatcccacaacacctgtcgccccctactatcac |
109 |
Q |
| |
|
||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47556226 |
acatcattaaagtcaccaagaacacaccacaccgcttccccatgtaaaggaaacaaattagacaaagaatcccacaacacctgtcgccccctactatcac |
47556325 |
T |
 |
| Q |
110 |
aaggagcataaatattcgccaaacagaacacctcattatttgatacaaaggaacctttaacaatcaaacaataatcaatatttactgacaaccaaacatc |
209 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| | ||||||||||||||||||| ||||| |
|
|
| T |
47556326 |
aaggagcataaatattcgccaaacagaacacctcattatttgctacaaaggagcctttaacaatcaaacaattagcaatatttactgacaaccagacatc |
47556425 |
T |
 |
| Q |
210 |
caaaacagacggatcccacaccgtaataatacctcccgaagctccgactgaagctttaaatgagtaagccatcaaatcagccccccataaggagtgacac |
309 |
Q |
| |
|
||| ||||| |||||||||| ||| ||||||||||| ||||| ||||||||||||||||| || ||||||||||||||||||||||||||||| ||||| |
|
|
| T |
47556426 |
caacacagaaggatcccacaacgtgataatacctccagaagcaccgactgaagctttaaaggaataagccatcaaatcagccccccataaggaacgacac |
47556525 |
T |
 |
| Q |
310 |
aaaaactcatccaccacc |
327 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
47556526 |
aaaaactcatccaccacc |
47556543 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 282
Target Start/End: Complemental strand, 20695297 - 20695029
Alignment:
| Q |
14 |
cattaaaatcaccaagaacacaccaagccgcttctccatgtaaaggaaacaaattagacaaagaatcccacaacacctgtcgccccctactatcacaagg |
113 |
Q |
| |
|
|||||||||||||||||| ||||||||| ||||| |||||| ||| ||||||||| || ||||||||| | || ||||||||| | |||||||| |
|
|
| T |
20695297 |
cattaaaatcaccaagaatacaccaagcagcttcatcatgtacctgaatcaaattagataacacatcccacaaatcttgccgccccctattgtcacaagg |
20695198 |
T |
 |
| Q |
114 |
agcataaatattcgccaaacagaacacctcattatttgatacaaaggaacctttaacaatcaaacaataatcaatatttactgacaaccaaacatccaaa |
213 |
Q |
| |
|
||||| |||| |||||||| |||| ||| ||||| || || ||||||||||||||||||| | ||||||| || | || |||||||||||| |
|
|
| T |
20695197 |
ggcataggtattagccaaacaaaacaattcactattttttaagaacctccctttaacaatcaaacaattaacaatattcaccgtcacccaaacatccaac |
20695098 |
T |
 |
| Q |
214 |
acagacggatcccacaccgtaataatacctcccgaagctccgactgaagctttaaatgagtaagccatc |
282 |
Q |
| |
|
||| | |||||||| ||||||||||| || || || || ||||||| |||||| || |||||||| |
|
|
| T |
20695097 |
acactagagtcccacactgtaataataccaccagacgcaccaactgaaggtttaaaagaaaaagccatc |
20695029 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 282
Target Start/End: Complemental strand, 20700775 - 20700507
Alignment:
| Q |
14 |
cattaaaatcaccaagaacacaccaagccgcttctccatgtaaaggaaacaaattagacaaagaatcccacaacacctgtcgccccctactatcacaagg |
113 |
Q |
| |
|
|||||||||||||||||| ||||||||| ||||| |||||| ||| ||||||||| || ||||||||| | || ||||||||| | |||||||| |
|
|
| T |
20700775 |
cattaaaatcaccaagaatacaccaagcagcttcatcatgtacctgaatcaaattagataacacatcccacaaatcttgccgccccctattgtcacaagg |
20700676 |
T |
 |
| Q |
114 |
agcataaatattcgccaaacagaacacctcattatttgatacaaaggaacctttaacaatcaaacaataatcaatatttactgacaaccaaacatccaaa |
213 |
Q |
| |
|
||||| |||| |||||||| |||| ||| ||||| || || ||||||||||||||||||| | ||||||| || | || |||||||||||| |
|
|
| T |
20700675 |
ggcataggtattagccaaacaaaacaattcactattttttaagaacctccctttaacaatcaaacaattaacaatattcaccgtcacccaaacatccaac |
20700576 |
T |
 |
| Q |
214 |
acagacggatcccacaccgtaataatacctcccgaagctccgactgaagctttaaatgagtaagccatc |
282 |
Q |
| |
|
||| | |||||||| ||||||||||| || || || || ||||||| |||||| || |||||||| |
|
|
| T |
20700575 |
acactagagtcccacactgtaataataccaccagacgcaccaactgaaggtttaaaagaaaaagccatc |
20700507 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 269
Target Start/End: Original strand, 591117 - 591307
Alignment:
| Q |
79 |
tcccacaacacctgtcgccccctactatcacaaggagcataaatattcgccaaacagaacacctcattatttgatacaaaggaacctttaacaatcaaac |
178 |
Q |
| |
|
|||||||||| ||||||||||||| ||| | ||||||||||||| || |||||||| |||| ||||| ||| || ||| || || || | ||||| | |
|
|
| T |
591117 |
tcccacaacatctgtcgccccctaatattagaaggagcataaatgtttgccaaacaaaacatgtcattgttttttaaaaacgacccctttatcatcaagc |
591216 |
T |
 |
| Q |
179 |
aataatcaatatttactgacaaccaaacatccaaaacagacggatcccacaccgtaataatacctcccgaagctccgactgaagctttaaa |
269 |
Q |
| |
|
||| |||||||||| | || ||||||||||| ||| ||||||||||||||||||||||| || || || || ||||||| |||||| |
|
|
| T |
591217 |
aatttgcaatatttacagtcatccaaacatccagcacactaggatcccacaccgtaataataccaccagacgcaccaactgaagatttaaa |
591307 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 269
Target Start/End: Original strand, 12124573 - 12124781
Alignment:
| Q |
61 |
aacaaattagacaaagaatcccacaacacctgtcgccccctactatcacaaggagcataaatattcgccaaacagaacacctcattatttgatacaaagg |
160 |
Q |
| |
|
||||||||||| | || |||||||| | ||| ||||||||| ||| ||||||||||||||||| ||||||| |||| ||||||||| | ||| | |
|
|
| T |
12124573 |
aacaaattagagatagcttcccacaaaagctggcgccccctattattgcaaggagcataaatatttaccaaacaaaacatttcattatttttaataaacg |
12124672 |
T |
 |
| Q |
161 |
aacctttaacaatcaaacaataatcaatatttactgacaaccaaacatccaaaacagacggatcccacaccgtaataatacctcccgaagctccgactga |
260 |
Q |
| |
|
| || || | |||||||||| ||| ||||| | || |||||||||||| ||| |||||||||||||||||||| || || || || || ||||| |
|
|
| T |
12124673 |
accccttgatcatcaaacaatttgtaatgtttaccgtcatccaaacatccaacacactaggatcccacaccgtaataatgccaccagacgcaccaactga |
12124772 |
T |
 |
| Q |
261 |
agctttaaa |
269 |
Q |
| |
|
|| |||||| |
|
|
| T |
12124773 |
agatttaaa |
12124781 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 10 - 327
Target Start/End: Complemental strand, 10798966 - 10798649
Alignment:
| Q |
10 |
acatcattaaaatcaccaagaacacaccaagccgcttctccatgtaaaggaaacaaattagacaaagaatcccacaacacctgtcgccccctactatcac |
109 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
10798966 |
acatcattaaagtcaccaagaacacaccaagccgcttccccatgtaaaggaaacaaattagacaaagaatcccacaacacttgtcgccccctactatcac |
10798867 |
T |
 |
| Q |
110 |
aaggagcataaatattcgccaaacagaacacctcattatttgatacaaaggaacctttaacaatcaaacaataatcaatatttactgacaaccaaacatc |
209 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
10798866 |
aaggagcataaatattcgccaaactgaacacctcattatttgctacaaaggagcctttaacaatcaaacaattatcaatatttactgacaaccagacatc |
10798767 |
T |
 |
| Q |
210 |
caaaacagacggatcccacaccgtaataatacctcccgaagctccgactgaagctttaaatgagtaagccatcaaatcagccccccataaggagtgacac |
309 |
Q |
| |
|
||| ||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||||| || ||||||||||||||||||||||||||||| ||||| |
|
|
| T |
10798766 |
caacacagaaggatcccacaccgtgataatacctccagaagcaccgactgaagctttaaaggaataagccatcaaatcagccccccataaggaacgacac |
10798667 |
T |
 |
| Q |
310 |
aaaaactcatccaccacc |
327 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
10798666 |
aaaaactcatccaccacc |
10798649 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 234; Significance: 1e-129; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 10 - 327
Target Start/End: Complemental strand, 5388810 - 5388493
Alignment:
| Q |
10 |
acatcattaaaatcaccaagaacacaccaagccgcttctccatgtaaaggaaacaaattagacaaagaatcccacaacacctgtcgccccctactatcac |
109 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||| |
|
|
| T |
5388810 |
acatcattaaaatcaccaagaacacaccaagccgcttctccatgtaatggaaacaaattagacaaagaatcccacaacacctgatgccccctactgtcac |
5388711 |
T |
 |
| Q |
110 |
aaggagcataaatattcgccaaacagaacacctcattatttgatacaaaggaacctttaacaatcaaacaataatcaatatttactgacaaccaaacatc |
209 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||| ||||||||||| ||||| |
|
|
| T |
5388710 |
aaggagcataaacattcgccaaacagaacacctcattatttgcaacaaaagaacctttaacaatcaaacaattatcaatattaactgacaaccagacatc |
5388611 |
T |
 |
| Q |
210 |
caaaacagacggatcccacaccgtaataatacctcccgaagctccgactgaagctttaaatgagtaagccatcaaatcagccccccataaggagtgacac |
309 |
Q |
| |
|
||| ||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||| ||||| |
|
|
| T |
5388610 |
caacacagaaggatcccacatcgtaataatacctcccgaagcaccgactgaagctttaaaggagtaagccatcaaatcgatcccccataaggaacgacac |
5388511 |
T |
 |
| Q |
310 |
aaaaactcatccaccacc |
327 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
5388510 |
aaaaactcatccaccacc |
5388493 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 242
Target Start/End: Original strand, 2897316 - 2897373
Alignment:
| Q |
185 |
caatatttactgacaaccaaacatccaaaacagacggatcccacaccgtaataatacc |
242 |
Q |
| |
|
|||||||||| | ||||||||||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
2897316 |
caatatttaccgtcaaccaaacatccaaaacactaggatcccacacagtaataatacc |
2897373 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 14 - 245
Target Start/End: Complemental strand, 221998 - 221767
Alignment:
| Q |
14 |
cattaaaatcaccaagaacacaccaagccgcttctccatgtaaaggaaacaaattagacaaagaatcccacaacacctgtcgccccctactatcacaagg |
113 |
Q |
| |
|
||||||||||||||||||||||||| | ||||| |||||||| ||| |||||||| ||||| | ||||||| ||||| || || |||||||| ||||| |
|
|
| T |
221998 |
cattaaaatcaccaagaacacaccacacagcttccccatgtaactgaatcaaattagtcaaagcaccccacaaaacctggcgaccactactatcgcaagg |
221899 |
T |
 |
| Q |
114 |
agcataaatattcgccaaacagaacacctcattatttgatacaaaggaacctttaacaatcaaacaataatcaatatttactgacaaccaaacatccaaa |
213 |
Q |
| |
|
|||||||||||| |||||||| ||||| |||||| || || || ||||| ||||| ||||||| | ||||||||||||| ||||| ||||||| |
|
|
| T |
221898 |
agcataaatatttgccaaacaaaacacttcattactttttatgaacttccctttcacaataaaacaattagcaatatttactgataaccagacatccacc |
221799 |
T |
 |
| Q |
214 |
acagacggatcccacaccgtaataatacctcc |
245 |
Q |
| |
|
||| ||||||||||| || ||||||||||| |
|
|
| T |
221798 |
acactaggatcccacacagtgataatacctcc |
221767 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0032 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0032
Description:
Target: scaffold0032; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 14 - 150
Target Start/End: Complemental strand, 50262 - 50126
Alignment:
| Q |
14 |
cattaaaatcaccaagaacacaccaagccgcttctccatgtaaaggaaacaaattagacaaagaatcccacaacacctgtcgccccctactatcacaagg |
113 |
Q |
| |
|
||||||| || ||||| ||| |||||||| | || || ||||| | | ||||||||| | || ||||||| ||||||||||||||| |||||||||| |
|
|
| T |
50262 |
cattaaagtcgccaagcacaaaccaagccacatcaccgtgtaatagtagcaaattagagacagcgtcccacagaacctgtcgccccctattatcacaagg |
50163 |
T |
 |
| Q |
114 |
agcataaatattcgccaaacagaacacctcattattt |
150 |
Q |
| |
|
|||||||||||| |||||||| ||||| ||||||||| |
|
|
| T |
50162 |
agcataaatatttgccaaacaaaacacttcattattt |
50126 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 150
Target Start/End: Complemental strand, 17824063 - 17823927
Alignment:
| Q |
14 |
cattaaaatcaccaagaacacaccaagccgcttctccatgtaaaggaaacaaattagacaaagaatcccacaacacctgtcgccccctactatcacaagg |
113 |
Q |
| |
|
||||||| |||||||| ||||||||||| | || || |||| ||||||||||||| | | ||||||||| ||||| || |||||| ||| |||||| |
|
|
| T |
17824063 |
cattaaagtcaccaagcacacaccaagctacatcaccgtgtaccagaaacaaattagagaccgcatcccacaaaacctgacgtcccctattattacaagg |
17823964 |
T |
 |
| Q |
114 |
agcataaatattcgccaaacagaacacctcattattt |
150 |
Q |
| |
|
|||||||||||| |||||||| |||| ||||||||| |
|
|
| T |
17823963 |
agcataaatatttgccaaacaaaacatttcattattt |
17823927 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 326
Target Start/End: Complemental strand, 15646353 - 15646136
Alignment:
| Q |
109 |
caaggagcataaatattcgccaaacagaacacctcattatttgatacaaaggaacctttaacaatcaaacaataatcaatatttactgacaaccaaacat |
208 |
Q |
| |
|
||||||||||||||||| |||||||| ||||| ||||||||| | ||| || || |||| |||||||||| || ||| || | ||||||||||| |
|
|
| T |
15646353 |
caaggagcataaatatttgccaaacaaaacacttcattatttttaataaacgaccccttaatcatcaaacaatgcgaaaaattaaccgtcaaccaaacat |
15646254 |
T |
 |
| Q |
209 |
ccaaaacagacggatcccacaccgtaataatacctcccgaagctccgactgaagctttaaatgagtaagccatcaaatcagccccccataaggagtgaca |
308 |
Q |
| |
|
||| ||| ||||||||||||||||| ||||| || ||||| || |||| ||||||||| || ||||||| ||||| |||||| | ||| |||| |
|
|
| T |
15646253 |
ccactacattaggatcccacaccgtaattataccaccagaagcaccaactgcagctttaaaagaaaaagccataggatcagacccccaaatagagcgaca |
15646154 |
T |
 |
| Q |
309 |
caaaaactcatccaccac |
326 |
Q |
| |
|
|| |||||||| ||||| |
|
|
| T |
15646153 |
cacgaactcatcaaccac |
15646136 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 59 - 269
Target Start/End: Original strand, 23824553 - 23824763
Alignment:
| Q |
59 |
gaaacaaattagacaaagaatcccacaacacctgtcgccccctactatcacaaggagcataaatattcgccaaacagaacacctcattatttgatacaaa |
158 |
Q |
| |
|
||||||||||||| | | ||||||||| ||||| || || ||| ||| |||||||||||| ||||| |||||||| ||||| |||||||| || ||| |
|
|
| T |
23824553 |
gaaacaaattagagaccgcatcccacaagacctgacgtcctctattattacaaggagcatatatatttgccaaacaaaacacttcattattatttaaaaa |
23824652 |
T |
 |
| Q |
159 |
ggaacctttaacaatcaaacaataatcaatatttactgacaaccaaacatccaaaacagacggatcccacaccgtaataatacctcccgaagctccgact |
258 |
Q |
| |
|
| ||||||| ||||| |||| ||| ||||| | || |||||||||||| ||| || |||||||| ||||||||||| || ||||| || ||| |
|
|
| T |
23824653 |
cgtccctttaatcatcaagcaatttgcaaagtttacagtcacccaaacatccaacacactagggtcccacacagtaataataccaccagaagcgccaact |
23824752 |
T |
 |
| Q |
259 |
gaagctttaaa |
269 |
Q |
| |
|
|||| |||||| |
|
|
| T |
23824753 |
gaagatttaaa |
23824763 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 242
Target Start/End: Complemental strand, 17151045 - 17150864
Alignment:
| Q |
61 |
aacaaattagacaaagaatcccacaacacctgtcgccccctactatcacaaggagcataaatattcgccaaacagaacacctcattatttgatacaaagg |
160 |
Q |
| |
|
||||||||||| | || |||||||| ||| ||||||||| ||| ||||||||||||||||| ||||||| ||||| ||||||||| | ||| |
|
|
| T |
17151045 |
aacaaattagagacagcttcccacaaactctgacgccccctaatattgcaaggagcataaatatttaccaaacaaaacacttcattatttttaataaaca |
17150946 |
T |
 |
| Q |
161 |
aacctttaacaatcaaacaataatcaatatttactgacaaccaaacatccaaaacagacggatcccacaccgtaataatacc |
242 |
Q |
| |
|
| || || | |||||||||| |||| ||||| | ||||||||||||||| ||| ||||||||||||||||||||||| |
|
|
| T |
17150945 |
accccttgatcatcaaacaatttgcaatgtttaccgtcaaccaaacatccaacacattaggatcccacaccgtaataatacc |
17150864 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 79 - 239
Target Start/End: Original strand, 3517690 - 3517850
Alignment:
| Q |
79 |
tcccacaacacctgtcgccccctactatcacaaggagcataaatattcgccaaacagaacacctcattatttgatacaaaggaacctttaacaatcaaac |
178 |
Q |
| |
|
|||||||| | ||| ||||||||| ||| ||||||||||||||||| ||||||| |||| |||| |||| | ||| || || || | ||||||| |
|
|
| T |
3517690 |
tcccacaaaatctggcgccccctattattgcaaggagcataaatatttaccaaacaaaacatttcatgatttttaataaacgaccccttgattatcaaac |
3517789 |
T |
 |
| Q |
179 |
aataatcaatatttactgacaaccaaacatccaaaacagacggatcccacaccgtaataat |
239 |
Q |
| |
|
||| |||||||||| | ||||||||||||||| ||| |||||||||||||||||||| |
|
|
| T |
3517790 |
aatttgcaatatttaccgtcaaccaaacatccaacacactaggatcccacaccgtaataat |
3517850 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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