View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8132_high_27 (Length: 274)
Name: NF8132_high_27
Description: NF8132
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8132_high_27 |
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Alignment Details
Target: chr3 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 22 - 251
Target Start/End: Original strand, 21381520 - 21381753
Alignment:
| Q |
22 |
ttgctattcataattgtcaaaaagtgaatctcgagccctataattttcatcaaagtggtaaatgttgtcaaagcctgaaacgcgagaccctatattttgc |
121 |
Q |
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| T |
21381520 |
ttgctattcacaattgtcaaaaagtgaatctcgagacctataattttcatcaaagtggtaaatgttgtccaagcctgaaacgcgagaccctatattttcc |
21381619 |
T |
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| Q |
122 |
aaaatctgaagcgtgagaccgtattatgccaaaacctgaaaaccattgtctgcgatcacaattatcttgaaaaaatgtcttgctaacctcaaacttgttt |
221 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
21381620 |
aaaatctgaagcgtgagaccgtattatgccaaaacctgaaaaccattgtctgcgatcacaattatcttgaaaccctgtcttgctaacctcaaacttgttg |
21381719 |
T |
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| Q |
222 |
tagcc----cgaacatacttgccgatatgtaccc |
251 |
Q |
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||||| ||||||||||||||||||||||||| |
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| T |
21381720 |
tagcccgaacgaacatacttgccgatatgtaccc |
21381753 |
T |
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