View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8132_low_16 (Length: 405)

Name: NF8132_low_16
Description: NF8132
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8132_low_16
NF8132_low_16
[»] chr2 (28 HSPs)
chr2 (260-388)||(37131468-37131595)
chr2 (260-362)||(28611814-28611916)
chr2 (260-362)||(28612239-28612341)
chr2 (260-362)||(44543932-44544034)
chr2 (260-356)||(10129509-10129605)
chr2 (262-362)||(44256473-44256573)
chr2 (256-356)||(44543727-44543827)
chr2 (291-362)||(5001705-5001776)
chr2 (260-362)||(11735908-11736009)
chr2 (260-353)||(627535-627628)
chr2 (260-362)||(6348070-6348172)
chr2 (260-362)||(12898021-12898123)
chr2 (261-347)||(28612042-28612128)
chr2 (260-362)||(28612663-28612763)
chr2 (264-356)||(29549960-29550052)
chr2 (262-362)||(41995759-41995859)
chr2 (260-362)||(3249805-3249907)
chr2 (260-362)||(5001527-5001629)
chr2 (263-345)||(5013219-5013301)
chr2 (260-356)||(29550131-29550231)
chr2 (265-347)||(41326372-41326454)
chr2 (260-328)||(3249622-3249690)
chr2 (286-362)||(11736325-11736401)
chr2 (260-362)||(28612874-28612977)
chr2 (260-362)||(28612452-28612553)
chr2 (304-362)||(6347935-6347992)
chr2 (261-362)||(29549790-29549891)
chr2 (261-345)||(12896449-12896533)
[»] chr8 (44 HSPs)
chr8 (260-362)||(1197876-1197978)
chr8 (261-362)||(23828133-23828234)
chr8 (260-362)||(23830951-23831053)
chr8 (262-362)||(23838348-23838449)
chr8 (262-362)||(23085860-23085960)
chr8 (260-362)||(3459141-3459243)
chr8 (260-362)||(32062813-32062917)
chr8 (260-362)||(37410078-37410180)
chr8 (270-355)||(18308258-18308343)
chr8 (265-362)||(27853676-27853773)
chr8 (260-328)||(23838176-23838244)
chr8 (262-362)||(23960806-23960905)
chr8 (260-362)||(33198601-33198701)
chr8 (291-362)||(38111373-38111444)
chr8 (264-362)||(39922094-39922192)
chr8 (261-362)||(29580044-29580145)
chr8 (261-356)||(35617680-35617776)
chr8 (291-362)||(34947505-34947576)
chr8 (260-362)||(37198304-37198406)
chr8 (260-326)||(44430416-44430482)
chr8 (262-362)||(37197685-37197783)
chr8 (260-356)||(13797440-13797536)
chr8 (260-320)||(44434151-44434211)
chr8 (260-362)||(30439048-30439153)
chr8 (262-356)||(37198125-37198220)
chr8 (291-362)||(40399500-40399571)
chr8 (260-362)||(23960588-23960689)
chr8 (262-328)||(33198833-33198899)
chr8 (260-362)||(44429048-44429150)
chr8 (260-328)||(44429222-44429290)
chr8 (260-311)||(34345142-34345193)
chr8 (260-330)||(37197952-37198020)
chr8 (260-328)||(2084874-2084942)
chr8 (260-308)||(37197788-37197836)
chr8 (260-328)||(43419067-43419134)
chr8 (260-328)||(44430065-44430133)
chr8 (260-328)||(44433800-44433868)
chr8 (260-328)||(44433974-44434042)
chr8 (260-311)||(604385-604436)
chr8 (260-362)||(604508-604611)
chr8 (260-362)||(44433627-44433729)
chr8 (260-306)||(14683161-14683207)
chr8 (260-310)||(39921968-39922018)
chr8 (260-308)||(39922226-39922274)
[»] chr4 (55 HSPs)
chr4 (260-362)||(53144851-53144953)
chr4 (99-172)||(7809149-7809222)
chr4 (258-362)||(7821299-7821403)
chr4 (19-162)||(7796515-7796658)
chr4 (99-172)||(7821102-7821175)
chr4 (262-362)||(4941678-4941778)
chr4 (229-360)||(7796742-7796883)
chr4 (260-388)||(24049563-24049691)
chr4 (260-362)||(36639170-36639272)
chr4 (260-362)||(44500670-44500772)
chr4 (260-362)||(47768950-47769052)
chr4 (260-362)||(48076188-48076290)
chr4 (260-362)||(48076366-48076468)
chr4 (262-362)||(2177264-2177364)
chr4 (260-356)||(22292896-22292992)
chr4 (262-362)||(52689624-52689724)
chr4 (260-362)||(36639343-36639445)
chr4 (260-362)||(43161746-43161848)
chr4 (273-362)||(8118608-8118697)
chr4 (260-353)||(28379776-28379869)
chr4 (260-356)||(23952516-23952612)
chr4 (260-356)||(54653661-54653757)
chr4 (259-362)||(29967176-29967279)
chr4 (260-362)||(8397748-8397850)
chr4 (261-362)||(21585562-21585663)
chr4 (261-362)||(23952786-23952887)
chr4 (260-328)||(15456290-15456358)
chr4 (260-328)||(15463674-15463742)
chr4 (262-362)||(28389777-28389877)
chr4 (272-355)||(22292701-22292784)
chr4 (260-362)||(7821517-7821619)
chr4 (260-362)||(28813223-28813324)
chr4 (260-362)||(48076543-48076645)
chr4 (293-362)||(21581282-21581351)
chr4 (229-276)||(7821232-7821279)
chr4 (261-362)||(12796126-12796227)
chr4 (262-362)||(32010688-32010789)
chr4 (261-362)||(47631359-47631460)
chr4 (260-320)||(24046063-24046123)
chr4 (260-356)||(28379984-28380079)
chr4 (229-276)||(7809279-7809326)
chr4 (260-362)||(7809529-7809632)
chr4 (260-362)||(8118381-8118481)
chr4 (262-362)||(7809348-7809448)
chr4 (294-362)||(8079327-8079395)
chr4 (260-307)||(23952613-23952660)
chr4 (261-356)||(47631538-47631632)
chr4 (262-328)||(2481688-2481754)
chr4 (261-311)||(2526940-2526990)
chr4 (43-80)||(7821046-7821083)
chr4 (262-307)||(23952661-23952706)
chr4 (260-311)||(47428298-47428349)
chr4 (35-80)||(7809085-7809130)
chr4 (262-311)||(8079018-8079067)
chr4 (291-356)||(43161937-43162002)
[»] chr1 (45 HSPs)
chr1 (260-362)||(42492171-42492273)
chr1 (255-362)||(5428521-5428628)
chr1 (262-388)||(21617756-21617882)
chr1 (262-362)||(44262664-44262764)
chr1 (260-362)||(16165692-16165794)
chr1 (260-362)||(42497297-42497399)
chr1 (261-362)||(42496939-42497040)
chr1 (263-360)||(4100593-4100691)
chr1 (260-362)||(51113721-51113823)
chr1 (260-362)||(51114088-51114190)
chr1 (261-362)||(44263088-44263189)
chr1 (260-362)||(318553-318655)
chr1 (260-362)||(1156071-1156173)
chr1 (260-362)||(3227229-3227330)
chr1 (260-362)||(5428931-5429033)
chr1 (260-362)||(27296335-27296437)
chr1 (260-362)||(38684013-38684115)
chr1 (260-362)||(51113904-51114006)
chr1 (260-362)||(1647541-1647643)
chr1 (260-361)||(44263308-44263409)
chr1 (266-362)||(6537661-6537757)
chr1 (294-362)||(52584966-52585034)
chr1 (260-356)||(52740698-52740794)
chr1 (260-347)||(28950280-28950367)
chr1 (260-362)||(27296160-27296262)
chr1 (264-362)||(28950176-28950274)
chr1 (259-361)||(51272499-51272601)
chr1 (260-328)||(6537470-6537538)
chr1 (260-362)||(30083976-30084079)
chr1 (261-360)||(42497476-42497575)
chr1 (261-362)||(18912326-18912428)
chr1 (260-346)||(42497133-42497219)
chr1 (270-362)||(4100798-4100890)
chr1 (260-328)||(28950027-28950095)
chr1 (290-362)||(44099676-44099748)
chr1 (260-362)||(5429046-5429152)
chr1 (262-362)||(18912215-18912316)
chr1 (260-353)||(33375628-33375721)
chr1 (264-360)||(28949900-28949995)
chr1 (266-308)||(45417699-45417741)
chr1 (260-302)||(47790694-47790736)
chr1 (291-345)||(48411977-48412031)
chr1 (260-317)||(42492280-42492337)
chr1 (291-347)||(24595257-24595313)
chr1 (312-356)||(45417612-45417656)
[»] chr3 (34 HSPs)
chr3 (260-360)||(38887373-38887473)
chr3 (264-362)||(43017273-43017371)
chr3 (260-362)||(46451468-46451570)
chr3 (260-362)||(47503059-47503161)
chr3 (260-362)||(18094954-18095056)
chr3 (262-360)||(53047595-53047693)
chr3 (260-356)||(40050848-40050944)
chr3 (260-355)||(18094739-18094834)
chr3 (260-362)||(36643133-36643235)
chr3 (262-361)||(35560101-35560201)
chr3 (260-356)||(38887807-38887903)
chr3 (260-362)||(11454560-11454663)
chr3 (266-361)||(37760501-37760596)
chr3 (260-362)||(837209-837311)
chr3 (260-362)||(11454203-11454305)
chr3 (260-362)||(45514425-45514526)
chr3 (266-347)||(47519875-47519956)
chr3 (261-362)||(20877222-20877323)
chr3 (289-362)||(24365761-24365834)
chr3 (262-356)||(38887590-38887686)
chr3 (290-347)||(47519954-47520011)
chr3 (260-356)||(16015262-16015358)
chr3 (264-329)||(43819330-43819395)
chr3 (291-362)||(47503232-47503304)
chr3 (299-362)||(46451320-46451383)
chr3 (260-322)||(3847823-3847885)
chr3 (260-362)||(11522530-11522632)
chr3 (292-357)||(51654074-51654139)
chr3 (260-362)||(11453935-11454038)
chr3 (260-362)||(11454379-11454483)
chr3 (260-362)||(850930-851032)
chr3 (265-362)||(11220780-11220876)
chr3 (262-303)||(17755736-17755777)
chr3 (262-303)||(19057056-19057097)
[»] chr6 (22 HSPs)
chr6 (260-359)||(23622216-23622315)
chr6 (262-362)||(808829-808930)
chr6 (260-356)||(27579596-27579692)
chr6 (260-362)||(17202848-17202950)
chr6 (260-362)||(17906806-17906908)
chr6 (260-354)||(25068186-25068280)
chr6 (262-362)||(9828919-9829019)
chr6 (260-362)||(23610430-23610532)
chr6 (260-346)||(808470-808556)
chr6 (260-362)||(4811068-4811170)
chr6 (260-362)||(17201595-17201697)
chr6 (260-362)||(25067960-25068062)
chr6 (260-328)||(29201556-29201624)
chr6 (262-356)||(27315287-27315380)
chr6 (260-362)||(4100320-4100426)
chr6 (260-328)||(17199984-17200052)
chr6 (260-388)||(32208387-32208515)
chr6 (261-356)||(15130898-15130993)
chr6 (260-362)||(26832522-26832624)
chr6 (260-308)||(4125709-4125757)
chr6 (260-309)||(19121167-19121216)
chr6 (293-362)||(17202661-17202731)
[»] chr7 (48 HSPs)
chr7 (260-362)||(18486632-18486734)
chr7 (260-362)||(23591419-23591521)
chr7 (260-362)||(4680901-4681003)
chr7 (260-362)||(9141966-9142068)
chr7 (260-362)||(11650013-11650115)
chr7 (260-362)||(27716314-27716416)
chr7 (260-362)||(45419641-45419743)
chr7 (260-362)||(48640806-48640908)
chr7 (260-360)||(9142140-9142240)
chr7 (260-362)||(12140866-12140968)
chr7 (260-362)||(48641021-48641123)
chr7 (260-388)||(16492524-16492651)
chr7 (260-362)||(21224136-21224238)
chr7 (260-358)||(40450110-40450208)
chr7 (262-362)||(2526958-2527059)
chr7 (260-360)||(11645938-11646038)
chr7 (262-362)||(16671605-16671705)
chr7 (262-362)||(17645973-17646073)
chr7 (291-388)||(18487180-18487277)
chr7 (260-362)||(27716536-27716638)
chr7 (264-356)||(11646220-11646312)
chr7 (260-356)||(11646408-11646504)
chr7 (260-388)||(19222103-19222232)
chr7 (262-362)||(22324284-22324384)
chr7 (262-362)||(48641447-48641546)
chr7 (260-362)||(34837185-34837288)
chr7 (260-362)||(22773916-22774017)
chr7 (261-362)||(2354670-2354771)
chr7 (260-345)||(32278158-32278243)
chr7 (260-328)||(11646625-11646693)
chr7 (291-362)||(4681150-4681221)
chr7 (260-362)||(16671244-16671346)
chr7 (260-362)||(17645612-17645714)
chr7 (261-362)||(34837441-34837541)
chr7 (260-356)||(46264294-46264391)
chr7 (260-356)||(21128038-21128134)
chr7 (260-362)||(23591636-23591738)
chr7 (260-328)||(23591238-23591306)
chr7 (260-356)||(35124723-35124819)
chr7 (294-362)||(43059223-43059291)
chr7 (263-362)||(45419847-45419947)
chr7 (260-362)||(2853222-2853325)
chr7 (260-309)||(34837386-34837435)
chr7 (291-362)||(1566513-1566585)
chr7 (269-361)||(16362696-16362788)
chr7 (291-362)||(30991488-30991560)
chr7 (260-308)||(45285651-45285699)
chr7 (260-308)||(34837653-34837701)
[»] chr5 (38 HSPs)
chr5 (255-362)||(24351477-24351584)
chr5 (262-362)||(12442158-12442258)
chr5 (260-362)||(16529133-16529235)
chr5 (260-362)||(31487089-31487191)
chr5 (260-362)||(35159702-35159803)
chr5 (260-356)||(19121905-19122001)
chr5 (260-356)||(19122241-19122337)
chr5 (260-362)||(9488075-9488177)
chr5 (260-362)||(43394959-43395060)
chr5 (262-362)||(7673224-7673325)
chr5 (260-360)||(10409523-10409623)
chr5 (286-362)||(24350924-24351000)
chr5 (260-356)||(41093081-41093177)
chr5 (260-362)||(11313977-11314080)
chr5 (262-356)||(14166194-14166289)
chr5 (260-355)||(26523268-26523363)
chr5 (260-362)||(7127557-7127659)
chr5 (260-362)||(26523165-26523267)
chr5 (260-356)||(16526195-16526292)
chr5 (260-356)||(11313638-11313734)
chr5 (260-356)||(41092902-41092997)
chr5 (267-362)||(11313807-11313902)
chr5 (261-356)||(16528599-16528694)
chr5 (260-362)||(16528957-16529057)
chr5 (291-346)||(24326554-24326609)
chr5 (291-346)||(24350732-24350787)
chr5 (291-346)||(24351286-24351341)
chr5 (260-346)||(23138030-23138115)
chr5 (260-362)||(16528775-16528881)
chr5 (260-362)||(16305346-16305446)
chr5 (290-356)||(43395142-43395208)
chr5 (261-362)||(13035205-13035310)
chr5 (261-362)||(13105180-13105285)
chr5 (260-307)||(7673100-7673147)
chr5 (260-311)||(22431583-22431634)
chr5 (262-328)||(31486875-31486941)
chr5 (260-309)||(38109884-38109933)
chr5 (262-306)||(38268880-38268924)
[»] scaffold0013 (1 HSPs)
scaffold0013 (262-362)||(102705-102803)
[»] scaffold0504 (1 HSPs)
scaffold0504 (261-362)||(1539-1641)
[»] scaffold0018 (1 HSPs)
scaffold0018 (260-362)||(163808-163910)
[»] scaffold0294 (1 HSPs)
scaffold0294 (260-354)||(12399-12493)
[»] scaffold0240 (2 HSPs)
scaffold0240 (296-362)||(13285-13351)
scaffold0240 (260-362)||(13090-13192)
[»] scaffold0320 (1 HSPs)
scaffold0320 (260-356)||(14592-14688)


Alignment Details
Target: chr2 (Bit Score: 72; Significance: 1e-32; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 260 - 388
Target Start/End: Complemental strand, 37131595 - 37131468
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||| | |||||||||||||||  |||||||||||    
T  37131595 ccttatttattaattttgttagatctgcagcaatttaacctaatttttttccactcatttgctttattagt-ttgcaattatttaacttaacaaatttca 37131497  T
Q  360 tctnnnnnnntgcatcacactaatttcat 388  Q
    |||       |||||||||| ||||||||    
T  37131496 tctaaaaaaatgcatcacaccaatttcat 37131468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 28611916 - 28611814
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||| || |||| ||||||||||||||||||||| ||||||||||| ||||   |||||||||||||||| ||||| || ||    
T  28611916 ccttatttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcatttgcttgattaggtttgcaattatttaacctaacaagttcca 28611817  T
Q  360 tct 362  Q
    |||    
T  28611816 tct 28611814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 28612341 - 28612239
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||| |  |||  ||||||||||||||||||||| ||||||||||||||||   |||||||||||||||| |||||||| ||    
T  28612341 ccttatttattaattttgttagttttgcatcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattcca 28612242  T
Q  360 tct 362  Q
    |||    
T  28612241 tct 28612239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 44544034 - 44543932
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||  ||||||  |||||||| |||||||||||||||||||||| |||||||  ||| |||||||||||| || ||||| ||    
T  44544034 ccttatttattaattttgttacgtccgcaacaatttaacataattttttcccactcatttgcattattaagtttgtaattatttaacctaataaattcca 44543935  T
Q  360 tct 362  Q
    |||    
T  44543934 tct 44543932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 260 - 356
Target Start/End: Complemental strand, 10129605 - 10129509
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatt 356  Q
    |||||||||||||||||||||| || |||| ||||||||||||||| ||| | ||||||||||||||||   |||||||||||||||| || |||||    
T  10129605 ccttatttattaattttgttaggtctgcagcaatttaacctaatttgttctcgctcatttgctttattaggtttgcaattatttaacctaataaatt 10129509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 262 - 362
Target Start/End: Original strand, 44256473 - 44256573
Alignment:
Q  262 ttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatc 361  Q
    |||||||||||||||||||| || |||| ||||||||||||||||||||| ||||||| ||||||||   || ||| ||||||||| || ||||||||||    
T  44256473 ttatttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcattttctttattaggttttcaagtatttaacctaataaatttcatc 44256572  T
Q  362 t 362  Q
    |    
T  44256573 t 44256573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 256 - 356
Target Start/End: Complemental strand, 44543827 - 44543727
Alignment:
Q  256 ttaaccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaat 355  Q
    |||||||||||||||||||||||||  ||||||  ||||||||||||||||| ||| |||||||||||||||    |||||||||||||||| || ||||    
T  44543827 ttaaccttatttattaattttgttacgtccgcaacaatttaacctaatttttccccgctcatttgctttatttggtttgcaattatttaacctaaaaaat 44543728  T
Q  356 t 356  Q
    |    
T  44543727 t 44543727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 291 - 362
Target Start/End: Complemental strand, 5001776 - 5001705
Alignment:
Q  291 aatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatct 362  Q
    ||||||||||||||||||||| ||||||||||||||||   |||||||||||||||| ||||||||||||||    
T  5001776 aatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatct 5001705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 11735908 - 11736009
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||| |  |||| ||||||||||||| ||||||| ||||||||||| || |   |||||||||||||||| |||||||||||    
T  11735908 ccttatttattaattttgttaggtt-gcagcaatttaacctaatattttcccgctcatttgcttcataaggtttgcaattatttaacctaacaaatttca 11736006  T
Q  360 tct 362  Q
    |||    
T  11736007 tct 11736009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 260 - 353
Target Start/End: Original strand, 627535 - 627628
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaa 353  Q
    |||||||||||||||||||||  |  |||| ||||||||||||||||||||| ||||||| ||||||||   |||||||||||||||| |||||    
T  627535 ccttatttattaattttgttacgtttgcagcaatttaacctaattttttcccgctcatttactttattacatttgcaattatttaacctaacaa 627628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 6348070 - 6348172
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||  || |||| |||||||| |||||||||| | |||| |||||||||||   ||||||||||||||   |||||||||||    
T  6348070 ccttatttattaattttgttacgtctgcagcaatttaacataattttttctcgctcaattgctttattaggtttgcaattatttaatttaacaaatttca 6348169  T
Q  360 tct 362  Q
    |||    
T  6348170 tct 6348172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 12898021 - 12898123
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    ||||||||||||||||||||||||| |||| |||||||||| || |||| || ||||||| |||| |||   |||||||||||||| | |||||||| ||    
T  12898021 ccttatttattaattttgttagatctgcagcaatttaacctgatatttttccgctcatttactttgttaggtttgcaattatttaatctaacaaattcca 12898120  T
Q  360 tct 362  Q
    |||    
T  12898121 tct 12898123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 261 - 347
Target Start/End: Complemental strand, 28612128 - 28612042
Alignment:
Q  261 cttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaacc 347  Q
    ||||||||||||||||||||| || |||  ||||||||||||||||||||  ||||||| ||||||||   ||||||||||||||||    
T  28612128 cttatttattaattttgttaggtctgcaacaatttaacctaattttttccagctcattttctttattaggtttgcaattatttaacc 28612042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 28612763 - 28612663
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    ||||||||||||||||||||||  | |||  ||||||||||||| ||||||| |||||| |||||||||   |||||||||||||||| |||||||||||    
T  28612763 ccttatttattaattttgttagg-ctgcaacaatttaacctaatcttttcccgctcatt-gctttattaggtttgcaattatttaacctaacaaatttca 28612666  T
Q  360 tct 362  Q
    |||    
T  28612665 tct 28612663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 264 - 356
Target Start/End: Original strand, 29549960 - 29550052
Alignment:
Q  264 atttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatt 356  Q
    |||||||||||||||||| || ||| |||||||||||||||||||| |  |||||||||||||||   |||  ||||||||||| ||||||||    
T  29549960 atttattaattttgttaggtctgcactaatttaacctaattttttctcgttcatttgctttattaggtttgttattatttaacctaacaaatt 29550052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 262 - 362
Target Start/End: Complemental strand, 41995859 - 41995759
Alignment:
Q  262 ttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatc 361  Q
    |||||||||||||||||||  || | |  ||||||||||||||||||||   |||||||||||||||   |||||||||||||||| |||||||| ||||    
T  41995859 ttatttattaattttgttatgtctgaaacaatttaacctaattttttcctgttcatttgctttattaggtttgcaattatttaacctaacaaattccatc 41995760  T
Q  362 t 362  Q
    |    
T  41995759 t 41995759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 3249907 - 3249805
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    ||||||||||||||||||||||||| |||  ||||||||||||| |||| || || ||||||| |||||   | ||| | |||||||| |||||||||||    
T  3249907 ccttatttattaattttgttagatctgcaacaatttaacctaatatttttccgcttatttgctgtattaggttagcagtaatttaacctaacaaatttca 3249808  T
Q  360 tct 362  Q
    |||    
T  3249807 tct 3249805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 5001629 - 5001527
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||| || |||| ||||||| ||||||||||| |  |||||||||||||||   |  || |||||||||| || ||||||||    
T  5001629 ccttatttattaattttgttaggtctgcagcaatttaaactaattttttctcgttcatttgctttattaggttaacagttatttaacctaaaaaatttca 5001530  T
Q  360 tct 362  Q
    |||    
T  5001529 tct 5001527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 345
Target Start/End: Complemental strand, 5013301 - 5013219
Alignment:
Q  263 tatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaa 345  Q
    ||||||||||||||||||  || |||| |||||||||||| |||||||| ||||||||||||||||   || |||||||||||    
T  5013301 tatttattaattttgttacgtctgcagcaatttaacctaaatttttcccgctcatttgctttattaggtttacaattatttaa 5013219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 356
Target Start/End: Original strand, 29550131 - 29550231
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttatta---atg-ttgcaattatttaaccaaacaaat 355  Q
    ||||||||||||||||| |||| || |||  |||||||||||||||||| || ||||||||||||||||   | | |||||||||||||||| |||||||    
T  29550131 ccttatttattaattttattaggtctgcaacaatttaacctaatttttttccgctcatttgctttattagctaggtttgcaattatttaacctaacaaat 29550230  T
Q  356 t 356  Q
    |    
T  29550231 t 29550231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 347
Target Start/End: Original strand, 41326372 - 41326454
Alignment:
Q  265 tttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaacc 347  Q
    ||||||||||||||||| || |||  |||||||| |||||||| ||| |||||||| ||||||||  ||||||||||||||||    
T  41326372 tttattaattttgttaggtctgcaacaatttaacttaatttttccccgctcatttgttttattaagtttgcaattatttaacc 41326454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 260 - 328
Target Start/End: Complemental strand, 3249690 - 3249622
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttatta 328  Q
    |||||||||||||||||||||| || |||| ||||||| ||||| ||||||| |||||||||| |||||    
T  3249690 ccttatttattaattttgttaggtctgcagcaatttaagctaatattttcccgctcatttgctatatta 3249622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 362
Target Start/End: Original strand, 11736325 - 11736401
Alignment:
Q  286 gcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatct 362  Q
    |||| ||||||||||||| ||||||| ||||||||||| || |   |||||||||||||||| ||||||||||||||    
T  11736325 gcagcaatttaacctaatattttcccgctcatttgcttcataaggtttgcaattatttaacctaacaaatttcatct 11736401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 28612977 - 28612874
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttatta-atgttgcaattatttaaccaaacaaatttc 358  Q
    |||||||||||||||||||||| || |||  ||||||||||||||||||| |  ||||||| |||||||  | || ||||||||||| | |||||||| |    
T  28612977 ccttatttattaattttgttaggtctgcaacaatttaacctaattttttctcgttcatttgttttattaggtttttcaattatttaatctaacaaattcc 28612878  T
Q  359 atct 362  Q
    ||||    
T  28612877 atct 28612874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 28612553 - 28612452
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    ||||||||||||||||||||||  | |||  ||||||||||||||||||||  ||||||| ||||||||   ||||||||| |||||| || |||||| |    
T  28612553 ccttatttattaattttgttagg-ctgcaacaatttaacctaattttttccagctcattttctttattaggtttgcaattacttaacctaaaaaatttta 28612455  T
Q  360 tct 362  Q
    |||    
T  28612454 tct 28612452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 304 - 362
Target Start/End: Original strand, 6347935 - 6347992
Alignment:
Q  304 tttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatct 362  Q
    |||||||| |||||||||||||||| | || ||||||||||||| ||||||||||||||    
T  6347935 tttttcccgctcatttgctttattagt-ttacaattatttaacctaacaaatttcatct 6347992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 362
Target Start/End: Original strand, 29549790 - 29549891
Alignment:
Q  261 cttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcat 360  Q
    ||||||||| ||||||||||| ||  ||   ||||||| || |||||| || ||||||||||||||||   || ||||||||||||| || |||||||||    
T  29549790 cttatttatgaattttgttaggtctacaaccatttaacttattttttttccgctcatttgctttattaggtttacaattatttaacctaataaatttcat 29549889  T
Q  361 ct 362  Q
    ||    
T  29549890 ct 29549891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 261 - 345
Target Start/End: Complemental strand, 12896533 - 12896449
Alignment:
Q  261 cttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaa 345  Q
    ||||||||||||||||||||  ||  ||  |||||||| |||| |||| || |||||||| |||||||   ||||||||||||||    
T  12896533 cttatttattaattttgttatgtctacaacaatttaacttaatctttttccgctcatttgttttattaggtttgcaattatttaa 12896449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 5e-32; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 1197876 - 1197978
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||| || |||| ||||||||||||| ||||||| ||||||||||||||||  ||||||||||||||||| |||||||||||    
T  1197876 ccttatttattaattttgttaggtctgcagcaatttaacctaatcttttcccgctcatttgctttattagggttgcaattatttaacctaacaaatttca 1197975  T
Q  360 tct 362  Q
    |||    
T  1197976 tct 1197978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 261 - 362
Target Start/End: Complemental strand, 23828234 - 23828133
Alignment:
Q  261 cttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcat 360  Q
    ||||||||||||||||||||| || |||| ||||||||||||||||||||| ||||||||||||||||   |||||||||||||||| |||||||| |||    
T  23828234 cttatttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccat 23828135  T
Q  361 ct 362  Q
    ||    
T  23828134 ct 23828133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 23831053 - 23830951
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||| |  |||| ||||||||||||||||||||| ||||||||||||||||   |||||||||||||||| |||||||| ||    
T  23831053 ccttatttattaattttgttaggtgtgcagaaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattgca 23830954  T
Q  360 tct 362  Q
    |||    
T  23830953 tct 23830951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 262 - 362
Target Start/End: Complemental strand, 23838449 - 23838348
Alignment:
Q  262 ttatttattaattttgttagatccgcagtaatttaacct-aattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcat 360  Q
    |||||||||||||||||||| || |||| |||||||||| ||||||||||| |||||||||||||||| | |||||||||||||||| |||||||| |||    
T  23838449 ttatttattaattttgttaggtctgcagcaatttaaccttaattttttcccgctcatttgctttattagttttgcaattatttaacctaacaaattgcat 23838350  T
Q  361 ct 362  Q
    ||    
T  23838349 ct 23838348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 262 - 362
Target Start/End: Original strand, 23085860 - 23085960
Alignment:
Q  262 ttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatc 361  Q
    |||||||||||||||||||| || |||  ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| || ||||| ||||    
T  23085860 ttatttattaattttgttaggtctgcaacaatttaacctaattttttcccactcatttgctttattaggtttgcaattatttaacctaataaattccatc 23085959  T
Q  362 t 362  Q
    |    
T  23085960 t 23085960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 3459243 - 3459141
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    ||||||||| |||||||||||  || |||| |||||||| |||||||||||| ||||||||||||||||   |||||||||||||| | |||||||||||    
T  3459243 ccttatttactaattttgttacgtctgcagcaatttaacataattttttcccgctcatttgctttattaggtttgcaattatttaatctaacaaatttca 3459144  T
Q  360 tct 362  Q
    |||    
T  3459143 tct 3459141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 32062813 - 32062917
Alignment:
Q  260 ccttatttattaattttgttagat--ccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaattt 357  Q
    |||||||||||||||||||||  |  | |||| ||||||| ||||||||||||| ||||||||||||||||   |||||||||||||||| |||||||||    
T  32062813 ccttatttattaattttgttacgttgctgcagcaatttaaactaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattt 32062912  T
Q  358 catct 362  Q
    |||||    
T  32062913 catct 32062917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 37410180 - 37410078
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    ||||||||||||||||| |||  |  |||| |||||||| ||||||||| || ||||||||||||||||   |||||||||||||||| |||||||||||    
T  37410180 ccttatttattaattttattacgtttgcagcaatttaacttaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaatttca 37410081  T
Q  360 tct 362  Q
    |||    
T  37410080 tct 37410078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 270 - 355
Target Start/End: Complemental strand, 18308343 - 18308258
Alignment:
Q  270 taattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaat 355  Q
    ||||||||||| ||| ||| ||| |||||||||||||||||||||||||||||||||||   | |||||||||||||| |||||||    
T  18308343 taattttgttacatctgcaataacttaacctaattttttcccactcatttgctttattaggttcgcaattatttaacctaacaaat 18308258  T

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Target: chr8; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 265 - 362
Target Start/End: Complemental strand, 27853773 - 27853676
Alignment:
Q  265 tttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatct 362  Q
    ||||||||||||||||  || | || ||||||||||||||||||||| ||||||| ||||||||   |||||||||||||||| |||||||| |||||    
T  27853773 tttattaattttgttatgtctgtagcaatttaacctaattttttcccgctcatttactttattaggtttgcaattatttaacctaacaaattccatct 27853676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 260 - 328
Target Start/End: Complemental strand, 23838244 - 23838176
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttatta 328  Q
    |||||||||||||||||||||| || |||  ||||||||||||||||||||| ||||||||||||||||    
T  23838244 ccttatttattaattttgttaggtctgcaacaatttaacctaattttttcccgctcatttgctttatta 23838176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 262 - 362
Target Start/End: Complemental strand, 23960905 - 23960806
Alignment:
Q  262 ttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatc 361  Q
    ||||||| |||||||||||  || |||| |||||||||||||||||||| |||||||||||||||||   ||| |||||||||||| |||||||| ||||    
T  23960905 ttatttaataattttgttacgtctgcagcaatttaacctaattttttcc-actcatttgctttattaggtttgtaattatttaacctaacaaattccatc 23960807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 33198601 - 33198701
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||   ||||||||||| |||||   | ||| | |||||||| |||||||||||    
T  33198601 ccttatttattaattttgttaggtcagcagtaatttaacctaatttttt--tactcatttgctgtattaggttagcactaatttaacctaacaaatttca 33198698  T
Q  360 tct 362  Q
    |||    
T  33198699 tct 33198701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 291 - 362
Target Start/End: Original strand, 38111373 - 38111444
Alignment:
Q  291 aatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatct 362  Q
    ||||||||||||||||||||| ||||||||||||||||   |||||||||||||||| |||||||| |||||    
T  38111373 aatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacccaacaaattccatct 38111444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 264 - 362
Target Start/End: Complemental strand, 39922192 - 39922094
Alignment:
Q  264 atttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatct 362  Q
    ||||||||| |||||||  || |||| |||||||| |||||||||||| |||||||| |||||||   |||||||||||||||| |||||||| |||||    
T  39922192 atttattaactttgttacgtctgcagcaatttaacttaattttttcccgctcatttgttttattaggtttgcaattatttaacctaacaaattccatct 39922094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 261 - 362
Target Start/End: Complemental strand, 29580145 - 29580044
Alignment:
Q  261 cttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcat 360  Q
    ||||||||||||||||||||  |  |||  ||||||||||||||||||||| |||||||| |||||||   |||||||||||||| | |||| |||||||    
T  29580145 cttatttattaattttgttacgtatgcatcaatttaacctaattttttcccgctcatttgttttattaggtttgcaattatttaaactaacacatttcat 29580046  T
Q  361 ct 362  Q
    ||    
T  29580045 ct 29580044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 356
Target Start/End: Original strand, 35617680 - 35617776
Alignment:
Q  261 cttatttattaattttgttagatccgca-gtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatt 356  Q
    ||||||||||||||||||||  || ||| | |||||||| |||||||||||| |||||||| |||||||   |||||||||||||||| ||||||||    
T  35617680 cttatttattaattttgttacgtctgcaagcaatttaacttaattttttcccgctcatttgttttattaggtttgcaattatttaacctaacaaatt 35617776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 291 - 362
Target Start/End: Original strand, 34947505 - 34947576
Alignment:
Q  291 aatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatct 362  Q
    |||||||||||||||||| || ||||||||||||||||   ||| |||||||||||| ||||||||||||||    
T  34947505 aatttaacctaatttttttccgctcatttgctttattaggtttgaaattatttaacctaacaaatttcatct 34947576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 37198406 - 37198304
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||  || |||  |||||||||||||||||| || |||||||||||||||    || ||||| ||||||| |||||||| ||    
T  37198406 ccttatttattaattttgttacgtctgcaacaatttaacctaatttttttccgctcatttgctttattcggttttcaattgtttaacctaacaaattcca 37198307  T
Q  360 tct 362  Q
    |||    
T  37198306 tct 37198304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 326
Target Start/End: Original strand, 44430416 - 44430482
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttat 326  Q
    ||||||||||||||||||||||||| |||| || |||||||| | ||||||| ||||||||||||||    
T  44430416 ccttatttattaattttgttagatctgcagcaacttaacctactattttccctctcatttgctttat 44430482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 262 - 362
Target Start/End: Complemental strand, 37197783 - 37197685
Alignment:
Q  262 ttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatc 361  Q
    |||||||||||||||||||  || |||| ||||||||||||  ||||||  |||||||||||||||||   |  |||||||||||| |||||||||||||    
T  37197783 ttatttattaattttgttacctctgcagcaatttaacctaa--ttttcctgctcatttgctttattaaatataaaattatttaacctaacaaatttcatc 37197686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 260 - 356
Target Start/End: Original strand, 13797440 - 13797536
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatt 356  Q
    |||||||||||||||||||||| |  |||  || |||||||| ||||||||  ||||||||||||||||   |||||||||||||||  ||||||||    
T  13797440 ccttatttattaattttgttaggtttgcatcaacttaacctagttttttcctgctcatttgctttattaggtttgcaattatttaacttaacaaatt 13797536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 260 - 320
Target Start/End: Original strand, 44434151 - 44434211
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttg 320  Q
    ||||||||||||||||||||||||| |||| || |||||||||| ||||||| ||||||||    
T  44434151 ccttatttattaattttgttagatctgcagcaacttaacctaatattttccctctcatttg 44434211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 30439153 - 30439048
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccact---catttgctttattaatgttgcaattatttaaccaaacaaatt 356  Q
    |||||||||||||||||||||| || |||  ||||||| ||||||||||    ||   ||||||||||||||   |||||||||||||||| ||||||||    
T  30439153 ccttatttattaattttgttaggtctgcaacaatttaatctaattttttttttctgttcatttgctttattaggtttgcaattatttaacctaacaaatt 30439054  T
Q  357 tcatct 362  Q
    ||||||    
T  30439053 tcatct 30439048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 356
Target Start/End: Complemental strand, 37198220 - 37198125
Alignment:
Q  262 ttatttattaattttgttagatccgcagtaatttaacctaatt-ttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatt 356  Q
    |||||| ||||||||||||  || |||| |||||||||||||| |||| || ||||||||||||||||   |||||||||||||||| || |||||    
T  37198220 ttattttttaattttgttacgtctgcagcaatttaacctaattttttttccgctcatttgctttattaggtttgcaattatttaacctaataaatt 37198125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 362
Target Start/End: Complemental strand, 40399571 - 40399500
Alignment:
Q  291 aatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatct 362  Q
    ||||||||||||||||||||| |||||||| |||||||   ||| |||||||||||| |||||||| |||||    
T  40399571 aatttaacctaattttttcccgctcatttgttttattaggtttgtaattatttaacctaacaaattccatct 40399500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 23960689 - 23960588
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||  || |||  |||||||| ||||||||| |  |||||| |||||||||   || ||||||||||||| |||||||||||    
T  23960689 ccttatttattaattttgttacgtctgcaacaatttaacttaatttttttctgctcatt-gctttattaggtttacaattatttaacctaacaaatttca 23960591  T
Q  360 tct 362  Q
    |||    
T  23960590 tct 23960588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 262 - 328
Target Start/End: Original strand, 33198833 - 33198899
Alignment:
Q  262 ttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttatta 328  Q
    |||||||||||||||||||| || |||| ||||||||||||| |||| || |||||||||| |||||    
T  33198833 ttatttattaattttgttaggtctgcagcaatttaacctaatatttttccgctcatttgctgtatta 33198899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 44429048 - 44429150
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||| ||  ||  || |||||||||| ||||||| ||||||||||||||||     ||||| |||||||| |||||||| ||    
T  44429048 ccttatttattaattttgttaggtctccaacaacttaacctaatattttccctctcatttgctttattaggtaagcaataatttaacctaacaaattcca 44429147  T
Q  360 tct 362  Q
    |||    
T  44429148 tct 44429150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 260 - 328
Target Start/End: Original strand, 44429222 - 44429290
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttatta 328  Q
    |||||||||||||||||||||| || |||  || |||||||||| |||| || ||||||||||||||||    
T  44429222 ccttatttattaattttgttaggtctgcaacaacttaacctaatatttttcctctcatttgctttatta 44429290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 260 - 311
Target Start/End: Original strand, 34345142 - 34345193
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttccc 311  Q
    ||||||||||||||||| |||| || |||| |||||||||||||||||||||    
T  34345142 ccttatttattaattttattaggtctgcagcaatttaacctaattttttccc 34345193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 260 - 330
Target Start/End: Complemental strand, 37198020 - 37197952
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaat 330  Q
    |||||||||||||||||||||  || |||| |||||||||||||||||  || ||||||| ||||||||||    
T  37198020 ccttatttattaattttgttacgtctgcagcaatttaacctaattttt--ccgctcattttctttattaat 37197952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 328
Target Start/End: Original strand, 2084874 - 2084942
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttatta 328  Q
    |||||||||||||||||||||| |  |||| || |||| ||||| ||||||| |||||||||| |||||    
T  2084874 ccttatttattaattttgttaggtttgcagcaacttaatctaatattttccctctcatttgctgtatta 2084942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 308
Target Start/End: Complemental strand, 37197836 - 37197788
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaatttttt 308  Q
    |||||||||||||||||||||  || |||| ||||||||||||||||||    
T  37197836 ccttatttattaattttgttacgtctgcagcaatttaacctaatttttt 37197788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 328
Target Start/End: Complemental strand, 43419134 - 43419067
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttatta 328  Q
    ||||||||||||||||||||| ||| |||  || |||| |||| |||||||| ||||||||||||||||    
T  43419134 ccttatttattaattttgttacatctgcatcaacttaatctaa-tttttcccgctcatttgctttatta 43419067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 328
Target Start/End: Original strand, 44430065 - 44430133
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttatta 328  Q
    |||||||||||||||||||||| || |||  || ||||| |||| ||||||| | ||||||||||||||    
T  44430065 ccttatttattaattttgttaggtctgcaacaacttaacgtaatattttccctcccatttgctttatta 44430133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 328
Target Start/End: Original strand, 44433800 - 44433868
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttatta 328  Q
    |||||||||||||||||||||| || |||  || ||||| |||| ||||||| | ||||||||||||||    
T  44433800 ccttatttattaattttgttaggtctgcaacaacttaacgtaatattttccctcccatttgctttatta 44433868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 328
Target Start/End: Original strand, 44433974 - 44434042
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttatta 328  Q
    |||||||||||||||||||||| || |||  || ||||||||||  |||||| | ||||||||||||||    
T  44433974 ccttatttattaattttgttaggtctgcaacaacttaacctaatactttccctcccatttgctttatta 44434042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 260 - 311
Target Start/End: Complemental strand, 604436 - 604385
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttccc 311  Q
    ||||||||||||||||||||||||| | || || |||||||||| |||||||    
T  604436 ccttatttattaattttgttagatctgtagcaacttaacctaatattttccc 604385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 604611 - 604508
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactc-atttgctttattaatgttgcaattatttaaccaaacaaatttc 358  Q
    |||| |||||||||||||||||||| | || || |||||||||| ||||||| ||| ||||||| |||||   | ||| | |||||||  ||||||||||    
T  604611 ccttgtttattaattttgttagatctgtagcaacttaacctaatattttccctctctatttgctgtattaggttagcagtaatttaacataacaaatttc 604512  T
Q  359 atct 362  Q
    ||||    
T  604511 atct 604508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 44433627 - 44433729
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgtt-gcaattatttaaccaaacaaatttc 358  Q
    |||||||||| ||||||||||| || |||| || || || |||| ||||||| | |||||||| |||| ||||| ||| | |||||||| ||||||||||    
T  44433627 ccttatttatcaattttgttaggtctgcagcaacttcacttaatattttccctcccatttgctgtatt-atgttagcagtaatttaacctaacaaatttc 44433725  T
Q  359 atct 362  Q
    ||||    
T  44433726 atct 44433729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 260 - 306
Target Start/End: Original strand, 14683161 - 14683207
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaatttt 306  Q
    |||||||||||||||||||||| ||   |||||||||||||||||||    
T  14683161 ccttatttattaattttgttaggtctagagtaatttaacctaatttt 14683207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 39922018 - 39921968
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcc 310  Q
    |||||||||||||||||||||  || |||  ||||||||||||||||||||    
T  39922018 ccttatttattaattttgttacgtctgcaacaatttaacctaattttttcc 39921968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 260 - 308
Target Start/End: Complemental strand, 39922274 - 39922226
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaatttttt 308  Q
    |||||||||||||||||||||  ||  ||| ||||||||||||||||||    
T  39922274 ccttatttattaattttgttacgtcttcagcaatttaacctaatttttt 39922226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 5e-32; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 53144953 - 53144851
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||   ||| |||||||||||| |||||||||||    
T  53144953 ccttatttattaattttgttagatctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgtaattatttaacctaacaaatttca 53144854  T
Q  360 tct 362  Q
    |||    
T  53144853 tct 53144851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 99 - 172
Target Start/End: Original strand, 7809149 - 7809222
Alignment:
Q  99 gatagaaaaattaaatatatagcgaaatggctgaaaatgcaatcgtgaaaaattcacgagatatagcaaggctc 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  7809149 gatagaaaaattaaatatatagcgaaatggctgaaaatgcaatcgtgaaaaattcgcgagatatagcaaggctc 7809222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 258 - 362
Target Start/End: Original strand, 7821299 - 7821403
Alignment:
Q  258 aaccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaattt 357  Q
    |||||||||||||||||||||||| |  |||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| || |||||     
T  7821299 aaccttatttattaattttgttaggtatgcagcaatttaacctaattttttcccgcccatttgctttattaatgttgcaattatttaacctaataaattc 7821398  T
Q  358 catct 362  Q
    |||||    
T  7821399 catct 7821403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 19 - 162
Target Start/End: Original strand, 7796515 - 7796658
Alignment:
Q  19 tttcgaagaagctgaacttagttatgggtagcatgcgagcgatcagttacttatccaaactcnnnnnnnnnnnnnnnnnngatagaaaaattaaatatat 118  Q
    ||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||                  ||||||||||||||||||||    
T  7796515 tttcgaagaagctgaacttagttgtaggtagcatgtgagcgatcagttacttatccaaactctttttcattttttattttgatagaaaaattaaatatat 7796614  T
Q  119 agcgaaatggctgaaaatgcaatcgtgaaaaattcacgagatat 162  Q
    |||||||||||||||||||||||||||||| ||||  |||||||    
T  7796615 agcgaaatggctgaaaatgcaatcgtgaaatattcgggagatat 7796658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 99 - 172
Target Start/End: Original strand, 7821102 - 7821175
Alignment:
Q  99 gatagaaaaattaaatatatagcgaaatggctgaaaatgcaatcgtgaaaaattcacgagatatagcaaggctc 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  7821102 gatagaaaaattaaatatatagcgaaatggctgaaaatgcaatcgtgaaaaattcgcgagatatatcaaggctc 7821175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 262 - 362
Target Start/End: Original strand, 4941678 - 4941778
Alignment:
Q  262 ttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatc 361  Q
    ||||||||||||||||||| |||  || |||||||||||||||||||||| ||||||||||||||||   |||||||||||||||| |||||||||||||    
T  4941678 ttatttattaattttgttacatctacaataatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 4941777  T
Q  362 t 362  Q
    |    
T  4941778 t 4941778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 229 - 360
Target Start/End: Original strand, 7796742 - 7796883
Alignment:
Q  229 caacatcacatagggaaaatagatttgttaacctt----------atttattaattttgttagatccgcagtaatttaacctaattttttcccactcatt 318  Q
    |||||||||||||||||||||||||| ||||||||          |||||||||||||||||| || |||| |||||||||||||||||| || ||||||    
T  7796742 caacatcacatagggaaaatagatttcttaaccttatttatccttatttattaattttgttaggtctgcagcaatttaacctaatttttttccgctcatt 7796841  T
Q  319 tgctttattaatgttgcaattatttaaccaaacaaatttcat 360  Q
    ||||||||||   ||| |||||||||||| ||||||||||||    
T  7796842 tgctttattaggattgtaattatttaacctaacaaatttcat 7796883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 388
Target Start/End: Original strand, 24049563 - 24049691
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||| |  |||  ||||||||||||||||||||| ||||||||||||||||   |||||||||||||||| ||| |||||||    
T  24049563 ccttatttattaattttgttaggtgtgcatcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacgaatttca 24049662  T
Q  360 tctnnnnnnntgcatcacactaatttcat 388  Q
    |||       |||||||||| ||||||||    
T  24049663 tctaaaaaaatgcatcacaccaatttcat 24049691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 36639170 - 36639272
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||  |  | || ||||||||||||||||||||| ||||||||||||||||   |||||||||||||||| |||||||||||    
T  36639170 ccttatttattaattttgttacgtttgtagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttca 36639269  T
Q  360 tct 362  Q
    |||    
T  36639270 tct 36639272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 44500670 - 44500772
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||| ||||||||||||||||| || |||| ||||||||||||||||||||| ||||||||||||||||   |||||||||||||||  |||||||| ||    
T  44500670 ccttgtttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacgtaacaaattcca 44500769  T
Q  360 tct 362  Q
    |||    
T  44500770 tct 44500772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 47768950 - 47769052
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||  || |||| |||||||||||||||||| || ||||||||||| ||||   |||||||||||||||| |||||||||||    
T  47768950 ccttatttattaattttgttacgtctgcagcaatttaacctaatttttttccgctcatttgcttcattaggtttgcaattatttaacctaacaaatttca 47769049  T
Q  360 tct 362  Q
    |||    
T  47769050 tct 47769052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 48076188 - 48076290
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||  || |||| ||||||| ||||||||||||| ||||||||||||||||   |||||||||||||||| |||||||| ||    
T  48076188 ccttatttattaattttgttacgtctgcagcaatttaatctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattcca 48076287  T
Q  360 tct 362  Q
    |||    
T  48076288 tct 48076290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 48076366 - 48076468
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||| ||||||||||||||||  || |||| ||||||||||||||||| ||| ||||||||||||||||   |||||||||||||||| |||||||||||    
T  48076366 ccttctttattaattttgttacgtctgcagcaatttaacctaatttttccccgctcatttgctttattaggtttgcaattatttaacctaacaaatttca 48076465  T
Q  360 tct 362  Q
    |||    
T  48076466 tct 48076468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 262 - 362
Target Start/End: Original strand, 2177264 - 2177364
Alignment:
Q  262 ttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatc 361  Q
    ||||||||||||| ||||||||| |||| |||||||  |||||||||||| ||||||||||||||||   ||||||||| |||||| |||||||||||||    
T  2177264 ttatttattaattctgttagatctgcagcaatttaatttaattttttcccgctcatttgctttattaggtttgcaattacttaacctaacaaatttcatc 2177363  T
Q  362 t 362  Q
    |    
T  2177364 t 2177364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 260 - 356
Target Start/End: Original strand, 22292896 - 22292992
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatt 356  Q
    |||||||||||||||||| ||| || |||| |||||||||||||||||| || ||||||||||||||||   |||||||||||||||| ||||||||    
T  22292896 ccttatttattaattttgctaggtctgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaatt 22292992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 262 - 362
Target Start/End: Complemental strand, 52689724 - 52689624
Alignment:
Q  262 ttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatc 361  Q
    ||||||||||||||| |||| || ||| ||||||| |||||||||||||| ||||||||||||||||   ||| |||||||||||| |||||||||||||    
T  52689724 ttatttattaattttattaggtctgcattaatttatcctaattttttcccgctcatttgctttattaggtttgtaattatttaacctaacaaatttcatc 52689625  T
Q  362 t 362  Q
    |    
T  52689624 t 52689624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 36639343 - 36639445
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||| ||||||||||||||| |  |||| |||||||||||||||||||||  |||||| ||||||||   |||||||||||||||| |||||||||||    
T  36639343 ccttatatattaattttgttaggtttgcagcaatttaacctaattttttcccgttcattttctttattaggattgcaattatttaacctaacaaatttca 36639442  T
Q  360 tct 362  Q
    |||    
T  36639443 tct 36639445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 43161848 - 43161746
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||| ||||||  || |||  ||||||||||||||||||||| ||||||||| ||||||   |||||||||||||||| |||||||||||    
T  43161848 ccttatttattaatcttgttacgtctgcaacaatttaacctaattttttcccgctcatttgcattattaggtttgcaattatttaacctaacaaatttca 43161749  T
Q  360 tct 362  Q
    |||    
T  43161748 tct 43161746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 273 - 362
Target Start/End: Original strand, 8118608 - 8118697
Alignment:
Q  273 ttttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatct 362  Q
    ||||||||| || |||  |||||||||||||||||| || ||||||||||||||||  ||||||||||||||||| ||||||||||||||    
T  8118608 ttttgttaggtctgcaacaatttaacctaatttttttccgctcatttgctttattagggttgcaattatttaacctaacaaatttcatct 8118697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 260 - 353
Target Start/End: Complemental strand, 28379869 - 28379776
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaa 353  Q
    |||||||||||||||||||||| || |||  |||||||||||||||||| || ||||||||||||||||   |||||||||||||||| |||||    
T  28379869 ccttatttattaattttgttaggtctgcatcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaa 28379776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 260 - 356
Target Start/End: Complemental strand, 23952612 - 23952516
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatt 356  Q
    |||||||||||||||||||||  || |||| ||||||||||||||||||| | ||||||||||||||||   |||||||||||||||| || |||||    
T  23952612 ccttatttattaattttgttacgtctgcagcaatttaacctaattttttcacgctcatttgctttattaggtttgcaattatttaacctaaaaaatt 23952516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 260 - 356
Target Start/End: Complemental strand, 54653757 - 54653661
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatt 356  Q
    |||||||||||||||||||||  || |||  ||||||||||||||||||||| ||||||||||||||||   ||||| |||||||||| ||||||||    
T  54653757 ccttatttattaattttgttacgtctgcatcaatttaacctaattttttcccgctcatttgctttattaggtttgcagttatttaacctaacaaatt 54653661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 259 - 362
Target Start/End: Original strand, 29967176 - 29967279
Alignment:
Q  259 accttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttc 358  Q
    ||||||||||||||||||||||| |  |||| || |||||||||||||||||| |||||||| |||||||   |||||||||| ||||| |||||||| |    
T  29967176 accttatttattaattttgttaggtttgcagcaacttaacctaattttttcccgctcatttgttttattagatttgcaattatataacctaacaaattcc 29967275  T
Q  359 atct 362  Q
    ||||    
T  29967276 atct 29967279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 8397850 - 8397748
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||| || |||| |||||||||||||||||| |  ||| |||| |||||||   |||||||||||||||  |||||||||||    
T  8397850 ccttatttattaattttgttaggtctgcagcaatttaacctaatttttttctgctcgtttgttttattaggtttgcaattatttaacttaacaaatttca 8397751  T
Q  360 tct 362  Q
    |||    
T  8397750 tct 8397748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 261 - 362
Target Start/End: Complemental strand, 21585663 - 21585562
Alignment:
Q  261 cttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcat 360  Q
    ||||||||||||||||||||  || |||  |||||||| ||||||||| || ||||||||||||||||   |||||||||||||||  ||||||||||||    
T  21585663 cttatttattaattttgttacgtctgcaacaatttaacttaatttttttcctctcatttgctttattaggtttgcaattatttaacttaacaaatttcat 21585564  T
Q  361 ct 362  Q
    ||    
T  21585563 ct 21585562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 261 - 362
Target Start/End: Complemental strand, 23952887 - 23952786
Alignment:
Q  261 cttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcat 360  Q
    ||||||||||||||||||||  || |||| |||||||||||||||||| || |||||||| |||||||   |||||||||||||||  |||||||| |||    
T  23952887 cttatttattaattttgttacgtctgcagcaatttaacctaatttttttccgctcatttgttttattaggtttgcaattatttaacttaacaaattccat 23952788  T
Q  361 ct 362  Q
    ||    
T  23952787 ct 23952786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 260 - 328
Target Start/End: Original strand, 15456290 - 15456358
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttatta 328  Q
    |||| ||||||||||||||||| || |||| |||||||||||||||| |||||||||||||||||||||    
T  15456290 ccttgtttattaattttgttaggtctgcagcaatttaacctaattttatcccactcatttgctttatta 15456358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 260 - 328
Target Start/End: Original strand, 15463674 - 15463742
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttatta 328  Q
    |||| ||||||||||||||||| || |||| |||||||||||||||| |||||||||||||||||||||    
T  15463674 ccttgtttattaattttgttaggtctgcagcaatttaacctaattttatcccactcatttgctttatta 15463742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 262 - 362
Target Start/End: Complemental strand, 28389877 - 28389777
Alignment:
Q  262 ttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatc 361  Q
    |||||||||||||||||||| |  ||||||||| | |||||| ||||||| ||||||||||||||||   ||||| |||||||||| |||||||| ||||    
T  28389877 ttatttattaattttgttaggtttgcagtaattcatcctaatattttcccgctcatttgctttattaggtttgcatttatttaacctaacaaattccatc 28389778  T
Q  362 t 362  Q
    |    
T  28389777 t 28389777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 272 - 355
Target Start/End: Original strand, 22292701 - 22292784
Alignment:
Q  272 attttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaat 355  Q
    |||||||||| || ||| ||||||||||||||||||| || ||||||||||||||||   |||||||||||||||| |||||||    
T  22292701 attttgttaggtctgcaataatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaat 22292784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 7821517 - 7821619
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||| || | || |||||||||||||||||| |  ||||||||||||||||   ||| |||||||||||| |  ||||||||    
T  7821517 ccttatttattaattttgttaggtctggagcaatttaacctaattttttactgctcatttgctttattaggtttgtaattatttaacctacaaaatttca 7821616  T
Q  360 tct 362  Q
    |||    
T  7821617 tct 7821619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 28813223 - 28813324
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||| |   ||  ||||||| ||||||||||||  ||||||||||||||||   ||| ||||||||||||||||||||||||    
T  28813223 ccttatttattaattttgttaggtttacaacaatttaatctaattttttccg-ctcatttgctttattaggtttgtaattatttaaccaaacaaatttca 28813321  T
Q  360 tct 362  Q
    |||    
T  28813322 tct 28813324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 48076543 - 48076645
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||  |  |||| |||||||||||||||||| || || |||||||||||||   || ||||||||||||| |||||||| ||    
T  48076543 ccttatttattaattttgttacgtttgcagcaatttaacctaatttttttccgctaatttgctttattaggtttacaattatttaacctaacaaattcca 48076642  T
Q  360 tct 362  Q
    |||    
T  48076643 tct 48076645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 293 - 362
Target Start/End: Complemental strand, 21581351 - 21581282
Alignment:
Q  293 tttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatct 362  Q
    ||||||||||||||||| | ||||||||||||||||   |||||||||||||||| ||||||||||||||    
T  21581351 tttaacctaattttttctcgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatct 21581282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 229 - 276
Target Start/End: Original strand, 7821232 - 7821279
Alignment:
Q  229 caacatcacatagggaaaatagatttgttaaccttatttattaatttt 276  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  7821232 caacatcacatagggaaaatagatttcttaaccttatttattaatttt 7821279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 261 - 362
Target Start/End: Complemental strand, 12796227 - 12796126
Alignment:
Q  261 cttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcat 360  Q
    |||||||||||||||| |||| |  | || |||||||||||||||||| || |||||||| |||||||   |||||||||||||| | |||||||| |||    
T  12796227 cttatttattaattttattaggtatgtagcaatttaacctaatttttttccgctcatttgttttattaggtttgcaattatttaatctaacaaattccat 12796128  T
Q  361 ct 362  Q
    ||    
T  12796127 ct 12796126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 262 - 362
Target Start/End: Complemental strand, 32010789 - 32010688
Alignment:
Q  262 ttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaacc-aaacaaatttcat 360  Q
    |||||||||||||||||||  || |||||||||||| |||||||||| || ||||||| ||||||||   ||| |||||||| ||| ||||||||| |||    
T  32010789 ttatttattaattttgttacgtctgcagtaatttaaactaatttttttccgctcattttctttattaggtttgtaattattttacctaaacaaattccat 32010690  T
Q  361 ct 362  Q
    ||    
T  32010689 ct 32010688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 261 - 362
Target Start/End: Original strand, 47631359 - 47631460
Alignment:
Q  261 cttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcat 360  Q
    ||||||||||||||||||||| |  |||  ||||||||||||||| || |  || ||||||||| |||   |||||||||||||||| ||||||||||||    
T  47631359 cttatttattaattttgttaggtatgcatcaatttaacctaatttatttctgctaatttgctttgttaggtttgcaattatttaacctaacaaatttcat 47631458  T
Q  361 ct 362  Q
    ||    
T  47631459 ct 47631460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 260 - 320
Target Start/End: Original strand, 24046063 - 24046123
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttg 320  Q
    |||||||||||||||||||||| |  |||| ||||||||||||||||||||| ||||||||    
T  24046063 ccttatttattaattttgttaggtgtgcagcaatttaacctaattttttcccgctcatttg 24046123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 260 - 356
Target Start/End: Complemental strand, 28380079 - 28379984
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatt 356  Q
    |||||||||||||||||||||| || |||  ||||||||||||| |||||   |||||||| |||||||   |||||||||||||||| ||||||||    
T  28380079 ccttatttattaattttgttaggtctgcaccaatttaacctaat-ttttcttgctcatttgttttattaggtttgcaattatttaacctaacaaatt 28379984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 229 - 276
Target Start/End: Original strand, 7809279 - 7809326
Alignment:
Q  229 caacatcacatagggaaaatagatttgttaaccttatttattaatttt 276  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||    
T  7809279 caacatcacatagggaaaatatatttcttaaccttatttattaatttt 7809326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 7809529 - 7809632
Alignment:
Q  260 ccttatttattaattttg-ttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttc 358  Q
    |||| ||||||||||||  |||| || | ||||||||||||||||||||| |  ||||||||||||||||   ||| |||||||||||| || |||||||    
T  7809529 ccttttttattaatttttattaggtctggagtaatttaacctaatttttttctgctcatttgctttattagatttgtaattatttaacctaaaaaatttc 7809628  T
Q  359 atct 362  Q
    ||||    
T  7809629 atct 7809632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 8118381 - 8118481
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||| ||||  || |||  |||||||| ||||||||| |  ||||||||||||||||   |||||||||||||||| |||||||||||    
T  8118381 ccttatttattaattt-gttacgtctgcaacaatttaacttaatttttttcg-ctcatttgctttattaggtttgcaattatttaacctaacaaatttca 8118478  T
Q  360 tct 362  Q
    |||    
T  8118479 tct 8118481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 262 - 362
Target Start/End: Original strand, 7809348 - 7809448
Alignment:
Q  262 ttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatc 361  Q
    ||||| |||||||||||||| |  |||  |||| ||||||||||||| |  ||||||||||||||||   ||| |||||||||||| || ||||||||||    
T  7809348 ttattcattaattttgttaggtatgcaacaattgaacctaatttttttctgctcatttgctttattaggtttgtaattatttaacctaaaaaatttcatc 7809447  T
Q  362 t 362  Q
    |    
T  7809448 t 7809448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 294 - 362
Target Start/End: Original strand, 8079327 - 8079395
Alignment:
Q  294 ttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatct 362  Q
    ||||||||||||||||| |||||||  ||||||||   |||||||||||||||| |||||||| |||||    
T  8079327 ttaacctaattttttcctactcattacctttattaggtttgcaattatttaacctaacaaattccatct 8079395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 260 - 307
Target Start/End: Complemental strand, 23952660 - 23952613
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttt 307  Q
    |||||||||||||||||||||  || ||||||||||||||||||||||    
T  23952660 ccttatttattaattttgttacgtctgcagtaatttaacctaattttt 23952613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 261 - 356
Target Start/End: Original strand, 47631538 - 47631632
Alignment:
Q  261 cttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatt 356  Q
    |||||||||||||||||| || || |||  ||||||||||||||| || |  ||| ||||||||||||   |||||||||||||||| ||||||||    
T  47631538 cttatttattaattttgtcaggtctgcatcaatttaacctaatttatt-ctgctcttttgctttattaggtttgcaattatttaacctaacaaatt 47631632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 328
Target Start/End: Complemental strand, 2481754 - 2481688
Alignment:
Q  262 ttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttatta 328  Q
    |||| ||||||||||||||  || |||  || |||||||||||||||||| ||||||||||||||||    
T  2481754 ttatctattaattttgttacgtctgcaacaacttaacctaattttttcccgctcatttgctttatta 2481688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 2526940 - 2526990
Alignment:
Q  261 cttatttattaattttgttagatccgcagtaatttaacctaattttttccc 311  Q
    ||||||||||||||||| ||| || |||| |||||||||||||||||||||    
T  2526940 cttatttattaattttggtaggtctgcagcaatttaacctaattttttccc 2526990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 7821046 - 7821083
Alignment:
Q  43 tgggtagcatgcgagcgatcagttacttatccaaactc 80  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  7821046 tgggtagcatgtgagcgatcagttacttatccaaactc 7821083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 262 - 307
Target Start/End: Complemental strand, 23952706 - 23952661
Alignment:
Q  262 ttatttattaattttgttagatccgcagtaatttaacctaattttt 307  Q
    |||||||||||||||||||  || ||||||||||||||||||||||    
T  23952706 ttatttattaattttgttacgtctgcagtaatttaacctaattttt 23952661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 260 - 311
Target Start/End: Complemental strand, 47428349 - 47428298
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttccc 311  Q
    |||||||||||||||||||||||||  ||  ||||||||||||| |||||||    
T  47428349 ccttatttattaattttgttagatctacaacaatttaacctaatattttccc 47428298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 80
Target Start/End: Original strand, 7809085 - 7809130
Alignment:
Q  35 cttagttatgggtagcatgcgagcgatcagttacttatccaaactc 80  Q
    ||||||| | ||||||||| |||| |||||||||||||||||||||    
T  7809085 cttagttgtaggtagcatgtgagccatcagttacttatccaaactc 7809130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 311
Target Start/End: Original strand, 8079018 - 8079067
Alignment:
Q  262 ttatttattaattttgttagatccgcagtaatttaacctaattttttccc 311  Q
    |||||||||||||||||||| || | || ||||||| |||||||||||||    
T  8079018 ttatttattaattttgttagttctggagcaatttaagctaattttttccc 8079067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 356
Target Start/End: Complemental strand, 43162002 - 43161937
Alignment:
Q  291 aatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatt 356  Q
    |||||||| ||| |||||| | ||||||||||||||||   |||||||||||||||  ||||||||    
T  43162002 aatttaacttaactttttcacgctcatttgctttattaggtttgcaattatttaacttaacaaatt 43161937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 5e-32; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 42492273 - 42492171
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| |||||||| ||    
T  42492273 ccttatttattaattttgttaggtctgcagcaatttaacctaattttttcccactcatttgctttattaggtttgcaattatttaacctaacaaattcca 42492174  T
Q  360 tct 362  Q
    |||    
T  42492173 tct 42492171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 255 - 362
Target Start/End: Original strand, 5428521 - 5428628
Alignment:
Q  255 gttaaccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaa 354  Q
    |||| |||||||||||||||||||||| || |||| |||||||||||||||||| || ||||||||||||||||   |||||||||||||||| ||||||    
T  5428521 gttatccttatttattaattttgttaggtctgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaa 5428620  T
Q  355 tttcatct 362  Q
    ||||||||    
T  5428621 tttcatct 5428628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 262 - 388
Target Start/End: Original strand, 21617756 - 21617882
Alignment:
Q  262 ttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatc 361  Q
    ||||| |||||||||||||| || ||| |||||||||||||||||||||| ||||||||||||||||   |||||||||||||||| |||||||||||||    
T  21617756 ttattcattaattttgttaggtctgcattaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 21617855  T
Q  362 tnnnnnnntgcatcacactaatttcat 388  Q
    |       |||||| ||||||||||||    
T  21617856 taaaaaaatgcatcgcactaatttcat 21617882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 262 - 362
Target Start/End: Original strand, 44262664 - 44262764
Alignment:
Q  262 ttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatc 361  Q
    |||||||||||||||||||| || |||| |||||||||||||||||| |||||||||||||||||||   |||||||||||||||| |||||||| ||||    
T  44262664 ttatttattaattttgttaggtctgcagcaatttaacctaatttttttccactcatttgctttattacgtttgcaattatttaacctaacaaattccatc 44262763  T
Q  362 t 362  Q
    |    
T  44262764 t 44262764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 16165794 - 16165692
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||| || | || |||||||||||||||||||||  |||||||||||||||   |||||||||||||||| |||||||||||    
T  16165794 ccttatttattaattttgttaggtctgtagcaatttaacctaattttttcccgatcatttgctttattaggtttgcaattatttaacctaacaaatttca 16165695  T
Q  360 tct 362  Q
    |||    
T  16165694 tct 16165692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 42497399 - 42497297
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||| ||| || |||| |||||||||||||||||| || ||||||||||||||||   |||||||||||||||| |||||||||||    
T  42497399 ccttatttattaattttgataggtctgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaatttca 42497300  T
Q  360 tct 362  Q
    |||    
T  42497299 tct 42497297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 261 - 362
Target Start/End: Complemental strand, 42497040 - 42496939
Alignment:
Q  261 cttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcat 360  Q
    ||||||||||||||||||||| || |||| ||||||||||||||||||||| |||||||| |||||||   |||||||||||||||| |||||||| |||    
T  42497040 cttatttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcatttgttttattagatttgcaattatttaacctaacaaattccat 42496941  T
Q  361 ct 362  Q
    ||    
T  42496940 ct 42496939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 263 - 360
Target Start/End: Complemental strand, 4100691 - 4100593
Alignment:
Q  263 tatttattaattttgttagatccgcagtaatttaacctaatt-ttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcat 360  Q
    ||||||||||||||||||| || ||||||||||||||||||| ||||||| |||||||| ||||||||  |||||||||||||||  ||||||||||||    
T  4100691 tatttattaattttgttaggtctgcagtaatttaacctaatttttttcccgctcatttgttttattaagtttgcaattatttaacttaacaaatttcat 4100593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 51113721 - 51113823
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||  |  |||| |||||||||||||||||| || ||||||||||||||||   |||||||||||||||| |||||||||||    
T  51113721 ccttatttattaattttgttacgtttgcagcaatttaacctaatttttttccgctcatttgctttattagatttgcaattatttaacctaacaaatttca 51113820  T
Q  360 tct 362  Q
    |||    
T  51113821 tct 51113823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 51114088 - 51114190
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||  || | || ||||||||||||||||||||| ||||||||||||||||   |||||||||||||||| |||||||| ||    
T  51114088 ccttatttattaattttgttacgtctgtagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattcca 51114187  T
Q  360 tct 362  Q
    |||    
T  51114188 tct 51114190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 261 - 362
Target Start/End: Original strand, 44263088 - 44263189
Alignment:
Q  261 cttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcat 360  Q
    ||||||||||||||||||||  || |||| |||||||||||||||||||||  |||||||||||||||   |||||||||||||||| |||||||| |||    
T  44263088 cttatttattaattttgttaagtctgcagcaatttaacctaattttttcccgttcatttgctttattaggtttgcaattatttaacctaacaaattccat 44263187  T
Q  361 ct 362  Q
    ||    
T  44263188 ct 44263189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 318553 - 318655
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||  || |||| ||||||| |||||||||| || ||||||||||||||||   |||||||||||||||| |||||||| ||    
T  318553 ccttatttattaattttgttacgtctgcagcaatttaatctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaattcca 318652  T
Q  360 tct 362  Q
    |||    
T  318653 tct 318655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 1156173 - 1156071
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||| ||||||   | |||| ||||||||||||||||||||| ||||||||||||||||   |||||||||||||||| |||||||| ||    
T  1156173 ccttatttattaatattgttacggctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattcca 1156074  T
Q  360 tct 362  Q
    |||    
T  1156073 tct 1156071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 3227330 - 3227229
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    ||||||||||||||||||||||||| |||  ||||||||||||||||||  | ||||||||||||||||   |||||||||||||||| |||||||| ||    
T  3227330 ccttatttattaattttgttagatctgcatcaatttaacctaatttttt-tcgctcatttgctttattaggtttgcaattatttaacctaacaaattcca 3227232  T
Q  360 tct 362  Q
    |||    
T  3227231 tct 3227229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 5428931 - 5429033
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    ||||||||||||||||||||||||| |||| ||||||| |||||||||| || ||||| ||||||||||   |||||||||||||| | |||||||| ||    
T  5428931 ccttatttattaattttgttagatctgcagcaatttaaactaatttttttccgctcatctgctttattaggtttgcaattatttaagctaacaaattcca 5429030  T
Q  360 tct 362  Q
    |||    
T  5429031 tct 5429033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 27296335 - 27296437
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||  || |||  ||||||||||||||||||| | ||||||| ||||||||   |||||||||||||||| |||||||||||    
T  27296335 ccttatttattaattttgttacgtctgcaacaatttaacctaattttttctcgctcattttctttattaggtttgcaattatttaacctaacaaatttca 27296434  T
Q  360 tct 362  Q
    |||    
T  27296435 tct 27296437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 38684013 - 38684115
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||| |  |||| |||||||||||||||||| || ||||||||||||||||   |||| ||||||||||| |||||||| ||    
T  38684013 ccttatttattaattttgttaggtttgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcgattatttaacctaacaaattcca 38684112  T
Q  360 tct 362  Q
    |||    
T  38684113 tct 38684115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 51113904 - 51114006
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||  || |||| |||||||||||||||||||||  |||||| ||||||||   |||||||||||||||| |||||||| ||    
T  51113904 ccttatttattaattttgttacgtctgcagcaatttaacctaattttttcccgttcatttactttattaggtttgcaattatttaacctaacaaattcca 51114003  T
Q  360 tct 362  Q
    |||    
T  51114004 tct 51114006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 1647541 - 1647643
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||| || |||| | |||||||||| ||||| |  ||||||||||||||||   ||| |||||||||||| |||||||||||    
T  1647541 ccttatttattaattttgttaggtctgcagcagtttaacctaagttttttctgctcatttgctttattaggtttggaattatttaacctaacaaatttca 1647640  T
Q  360 tct 362  Q
    |||    
T  1647641 tct 1647643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 260 - 361
Target Start/End: Original strand, 44263308 - 44263409
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||| || |||  ||| ||||||||||||||| | ||||||||| ||||||   |||||||||||||||| |||||||| ||    
T  44263308 ccttatttattaattttgttaggtctgcatcaatataacctaattttttctcgctcatttgccttattaggtttgcaattatttaacctaacaaattaca 44263407  T
Q  360 tc 361  Q
    ||    
T  44263408 tc 44263409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 266 - 362
Target Start/End: Complemental strand, 6537757 - 6537661
Alignment:
Q  266 ttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatct 362  Q
    |||||||||||||||| || |||  |||||||| |||||||||||| ||||||| ||||||||   |||||||||||||||| |||||||| |||||    
T  6537757 ttattaattttgttaggtcagcaacaatttaacttaattttttcccgctcatttactttattaggtttgcaattatttaacctaacaaattccatct 6537661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 294 - 362
Target Start/End: Original strand, 52584966 - 52585034
Alignment:
Q  294 ttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatct 362  Q
    ||||||||||||||||||||| ||||||||||||||  ||| |||||||||||| ||||||||||||||    
T  52584966 ttaacctaattttttcccacttatttgctttattaagtttgtaattatttaacctaacaaatttcatct 52585034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 260 - 356
Target Start/End: Original strand, 52740698 - 52740794
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatt 356  Q
    |||||||||||||||||||||| |  | || ||||||||||||||||||||| ||||||||||||||||   || ||||||||||||  ||||||||    
T  52740698 ccttatttattaattttgttaggtttgaagcaatttaacctaattttttcccgctcatttgctttattaggtttacaattatttaacttaacaaatt 52740794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 260 - 347
Target Start/End: Complemental strand, 28950367 - 28950280
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaacc 347  Q
    |||||||||||||||||||||  ||  ||| ||||||||||||||||||||| || |||||||||||||   ||||||||||||||||    
T  28950367 ccttatttattaattttgttacgtctccagcaatttaacctaattttttcccgctaatttgctttattaggtttgcaattatttaacc 28950280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 27296160 - 27296262
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||  || |||  ||||||||||||||||| ||| || |||||||||||||   |||||||||||||||| || ||||| ||    
T  27296160 ccttatttattaattttgttacgtctgcaacaatttaacctaatttttccccgcttatttgctttattaggtttgcaattatttaacctaataaattcca 27296259  T
Q  360 tct 362  Q
    |||    
T  27296260 tct 27296262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 264 - 362
Target Start/End: Complemental strand, 28950274 - 28950176
Alignment:
Q  264 atttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatct 362  Q
    |||||||||||||||||  ||||||  |||||||| ||||||||| || | ||||||||||||||   ||| |||||||||||| ||||||||||||||    
T  28950274 atttattaattttgttacgtccgcaacaatttaacttaatttttttccgcacatttgctttattagatttgaaattatttaacctaacaaatttcatct 28950176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 259 - 361
Target Start/End: Complemental strand, 51272601 - 51272499
Alignment:
Q  259 accttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttc 358  Q
    ||||||||||||||||||||||| ||  ||  |||||||||||||||||| |  ||||||||||||||||   |||||||||||||||| || ||||| |    
T  51272601 accttatttattaattttgttaggtctacaacaatttaacctaatttttttctgctcatttgctttattaggtttgcaattatttaacctaataaattcc 51272502  T
Q  359 atc 361  Q
    |||    
T  51272501 atc 51272499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 260 - 328
Target Start/End: Complemental strand, 6537538 - 6537470
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttatta 328  Q
    |||||||||||||||||||||| || | |  |||||||| |||||||||||||||||||||||||||||    
T  6537538 ccttatttattaattttgttaggtctgtaacaatttaacttaattttttcccactcatttgctttatta 6537470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 30083976 - 30084079
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattt-tttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttc 358  Q
    |||||||||||||||||||||| ||||||| ||||||| ||||||| ||| || || |||||||||||||   ||| ||||||||||||| | ||||| |    
T  30083976 ccttatttattaattttgttaggtccgcagcaatttaatctaatttcttttccgcttatttgctttattaggtttgaaattatttaaccatataaattcc 30084075  T
Q  359 atct 362  Q
    ||||    
T  30084076 atct 30084079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 261 - 360
Target Start/End: Complemental strand, 42497575 - 42497476
Alignment:
Q  261 cttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcat 360  Q
    ||||||||||||||||||||| || ||||||||||||| |||||||||  | |||||||  |||||||   ||| |||||||||||  ||||||||||||    
T  42497575 cttatttattaattttgttaggtctgcagtaatttaacttaattttttttcgctcatttattttattaggtttgtaattatttaacttaacaaatttcat 42497476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 261 - 362
Target Start/End: Original strand, 18912326 - 18912428
Alignment:
Q  261 cttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttg-caattatttaaccaaacaaatttca 359  Q
    ||||||||||||||||||||  || |||| |||||||||||||||||| || | ||||||||||||||   |||  |||||||||||  |||||||||||    
T  18912326 cttatttattaattttgttatgtctgcagcaatttaacctaatttttttccgcccatttgctttattaggtttgtaaattatttaacttaacaaatttca 18912425  T
Q  360 tct 362  Q
    |||    
T  18912426 tct 18912428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 346
Target Start/End: Complemental strand, 42497219 - 42497133
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaac 346  Q
    |||||||||||||||||||||||||  ||  ||||||||||||||||||| | | ||||||||||||||   || ||||||||||||    
T  42497219 ccttatttattaattttgttagatctacaacaatttaacctaattttttcgctcacatttgctttattaggtttacaattatttaac 42497133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 362
Target Start/End: Complemental strand, 4100890 - 4100798
Alignment:
Q  270 taattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatct 362  Q
    |||||||||||| || |||| ||||||| |||||||||| || |||||| | |||||||   |||||||||||||||| || |||||||||||    
T  4100890 taattttgttaggtctgcagcaatttaatctaatttttttccgctcattagttttattagatttgcaattatttaacctaaaaaatttcatct 4100798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 260 - 328
Target Start/End: Complemental strand, 28950095 - 28950027
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttatta 328  Q
    |||||||||||||||||||||  || |||  |||||||||||||||||| || ||||||||||||||||    
T  28950095 ccttatttattaattttgttacgtctgcaacaatttaacctaatttttttccgctcatttgctttatta 28950027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 290 - 362
Target Start/End: Complemental strand, 44099748 - 44099676
Alignment:
Q  290 taatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatct 362  Q
    |||||||||||||||||||  | ||||||||||||||||   |||||||||||||||| || |||||||||||    
T  44099748 taatttaacctaattttttttcgctcatttgctttattaggtttgcaattatttaacctaataaatttcatct 44099676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 5429046 - 5429152
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaatttttt----cccactcatttgctttattaatgttgcaattatttaaccaaacaaat 355  Q
    ||||||||||||| |||||||| |  |||| ||||||||||||||| ||    ||| |||| |||||||||||   |||||||||||||||| |||||||    
T  5429046 ccttatttattaactttgttaggtgtgcagcaatttaacctaatttattttcccccgctcaattgctttattaggtttgcaattatttaacctaacaaat 5429145  T
Q  356 ttcatct 362  Q
    | |||||    
T  5429146 tccatct 5429152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 362
Target Start/End: Original strand, 18912215 - 18912316
Alignment:
Q  262 ttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttg-caattatttaaccaaacaaatttcat 360  Q
    |||||||||||||||||||  || |||| ||||||| |||||||||| || ||||||| ||||||||   |||  |||||||||||  ||||||||||||    
T  18912215 ttatttattaattttgttatgtctgcagcaatttaatctaatttttttccgctcatttactttattaggtttgtaaattatttaacttaacaaatttcat 18912314  T
Q  361 ct 362  Q
    ||    
T  18912315 ct 18912316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 353
Target Start/End: Original strand, 33375628 - 33375721
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaa 353  Q
    |||||||||||||||||||||  ||   || |||||||||||||||||  || ||||||| ||||||||   |||||||||||||||| |||||    
T  33375628 ccttatttattaattttgttacgtctcaagcaatttaacctaatttttctccgctcatttactttattaggtttgcaattatttaacctaacaa 33375721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 264 - 360
Target Start/End: Complemental strand, 28949995 - 28949900
Alignment:
Q  264 atttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcat 360  Q
    |||||||||||||||||  || | ||  |||||||||||||||| ||| | ||||||||||||||   ||| |||||||||||| ||||||||||||    
T  28949995 atttattaattttgttacgtctgaagctatttaacctaattttt-cccgcacatttgctttattaggtttgtaattatttaacctaacaaatttcat 28949900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 266 - 308
Target Start/End: Complemental strand, 45417741 - 45417699
Alignment:
Q  266 ttattaattttgttagatccgcagtaatttaacctaatttttt 308  Q
    |||||||||||||||| || |||| ||||||||||||||||||    
T  45417741 ttattaattttgttaggtctgcagcaatttaacctaatttttt 45417699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 260 - 302
Target Start/End: Original strand, 47790694 - 47790736
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaa 302  Q
    |||||||||||||||||||||| || |||| ||||||||||||    
T  47790694 ccttatttattaattttgttaggtctgcagcaatttaacctaa 47790736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 291 - 345
Target Start/End: Complemental strand, 48412031 - 48411977
Alignment:
Q  291 aatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaa 345  Q
    |||||||||||| ||||||||  ||||||||||||||||  ||| ||||||||||    
T  48412031 aatttaacctaaatttttccctttcatttgctttattaaatttgtaattatttaa 48411977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 317
Target Start/End: Complemental strand, 42492337 - 42492280
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcat 317  Q
    |||||||||||||||||||||  ||  ||| ||||||||||| ||||||||| |||||    
T  42492337 ccttatttattaattttgttacgtctacagcaatttaacctatttttttcccgctcat 42492280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 24595257 - 24595313
Alignment:
Q  291 aatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaacc 347  Q
    |||||||| | |||||||||  ||||||||||||||||   ||||||||||||||||    
T  24595257 aatttaacttcattttttcctgctcatttgctttattaggtttgcaattatttaacc 24595313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 356
Target Start/End: Complemental strand, 45417656 - 45417612
Alignment:
Q  312 actcatttgctttattaatgttgcaattatttaaccaaacaaatt 356  Q
    |||||||||||||||||   |||||||||||||||| ||||||||    
T  45417656 actcatttgctttattaggtttgcaattatttaacctaacaaatt 45417612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 8e-31; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 260 - 360
Target Start/End: Complemental strand, 38887473 - 38887373
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||| || |||| ||||||||||||||||||||| ||||||||||||||||   |||||||||||||||| |||||||||||    
T  38887473 ccttatttattaattttgttaggtctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttca 38887374  T
Q  360 t 360  Q
    |    
T  38887373 t 38887373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 264 - 362
Target Start/End: Original strand, 43017273 - 43017371
Alignment:
Q  264 atttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatct 362  Q
    |||||||||||||||||  || |||| ||||||||||||||||||||| |||||||||||||||||  |||||||||||||||| ||||||||||||||    
T  43017273 atttattaattttgttacgtctgcagcaatttaacctaattttttcccgctcatttgctttattaagtttgcaattatttaacctaacaaatttcatct 43017371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 46451468 - 46451570
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||  || ||||||||||||||||||||||||||  |||||||||||||||   |||||||||||||||| |||||||| ||    
T  46451468 ccttatttattaattttgttacgtctgcagtaatttaacctaattttttcccgttcatttgctttattaggtttgcaattatttaacctaacaaattcca 46451567  T
Q  360 tct 362  Q
    |||    
T  46451568 tct 46451570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 47503161 - 47503059
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||  || |||| ||||||||||||||||||||| ||||||||| ||||||   |||||||||||||||| |||||||||||    
T  47503161 ccttatttattaattttgttacgtctgcagcaatttaacctaattttttcccgctcatttgcattattaggtttgcaattatttaacctaacaaatttca 47503062  T
Q  360 tct 362  Q
    |||    
T  47503061 tct 47503059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 18094954 - 18095056
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||| || |||  ||||||||||||||||||||| ||||||||||||||||   ||||||| |||||||| |||||||| ||    
T  18094954 ccttatttattaattttgttaggtctgcatcaatttaacctaattttttcccgctcatttgctttattaggtttgcaatgatttaacctaacaaattcca 18095053  T
Q  360 tct 362  Q
    |||    
T  18095054 tct 18095056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 262 - 360
Target Start/End: Complemental strand, 53047693 - 53047595
Alignment:
Q  262 ttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcat 360  Q
    |||||||||||||||||||| || |||| |||||||| |||||||||||| |||||||||||| |||   |||||||||||||||| ||||||||||||    
T  53047693 ttatttattaattttgttaggtctgcagcaatttaacataattttttcccgctcatttgctttgttaggtttgcaattatttaacctaacaaatttcat 53047595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 260 - 356
Target Start/End: Original strand, 40050848 - 40050944
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatt 356  Q
    ||||||||||| |||||||||| || |||| ||||||||||||||||||||| ||||||||||||||||   ||||||| |||||||| ||||||||    
T  40050848 ccttatttatttattttgttagttctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaataatttaacctaacaaatt 40050944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 260 - 355
Target Start/End: Original strand, 18094739 - 18094834
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaat 355  Q
    |||||||||||||||||||||| || |||| |||||||| |||||||||||| || |||||||||||||   |||||||||||||||| |||||||    
T  18094739 ccttatttattaattttgttaggtctgcagcaatttaacttaattttttcccgctaatttgctttattaggtttgcaattatttaacctaacaaat 18094834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 36643235 - 36643133
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||  |  |||| |||||||||||||||||| || ||||||||||||||||   |||||||||||||||| |||||||| ||    
T  36643235 ccttatttattaattttgttacgtatgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaattcca 36643136  T
Q  360 tct 362  Q
    |||    
T  36643135 tct 36643133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 262 - 361
Target Start/End: Original strand, 35560101 - 35560201
Alignment:
Q  262 ttatttattaattttgttagatccgcagtaatttaacctaattttttc-ccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcat 360  Q
    |||||||||||||||||||  || |||| ||||||||||||||||||  || ||||||||||||||||   |||||||||||||||| ||||||||||||    
T  35560101 ttatttattaattttgttacttctgcagcaatttaacctaattttttttcctctcatttgctttattaggtttgcaattatttaacctaacaaatttcat 35560200  T
Q  361 c 361  Q
    |    
T  35560201 c 35560201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 260 - 356
Target Start/End: Complemental strand, 38887903 - 38887807
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatt 356  Q
    ||||||||||||||||| | || || ||||||||||||||||||||||| || ||||||||||||||||   |||||||||||||||  ||||||||    
T  38887903 ccttatttattaattttatcaggtctgcagtaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacgtaacaaatt 38887807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 11454560 - 11454663
Alignment:
Q  260 ccttatttattaatttt-gttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttc 358  Q
    ||||||||||||||||| ||||  || |||| ||||||||||||||||||||| ||||||||||||||||   ||||||| |||||||| |||||||| |    
T  11454560 ccttatttattaatttttgttacgtctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaatcatttaacctaacaaattcc 11454659  T
Q  359 atct 362  Q
    ||||    
T  11454660 atct 11454663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 266 - 361
Target Start/End: Original strand, 37760501 - 37760596
Alignment:
Q  266 ttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatc 361  Q
    |||||||||||||||  || |||  |||||||||||| |||||||| ||||||||||||||||   |||||||||||||||| |||||||||||||    
T  37760501 ttattaattttgttacgtctgcaacaatttaacctaaatttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatc 37760596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 837311 - 837209
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    ||||||||||||||||| |||  || |||  |||||||||||||||||| || ||||||||||||||||   |||||||||||||||| |||||||| ||    
T  837311 ccttatttattaattttattatgtctgcaacaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaattcca 837212  T
Q  360 tct 362  Q
    |||    
T  837211 tct 837209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 11454203 - 11454305
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||  || |||  ||||||||||||||||||||| ||||| | |||||||    |||||||||||||||| |||||||||||    
T  11454203 ccttatttattaattttgttatgtctgcaacaatttaacctaattttttcccgctcatctactttatttggtttgcaattatttaacctaacaaatttca 11454302  T
Q  360 tct 362  Q
    |||    
T  11454303 tct 11454305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 45514526 - 45514425
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||  || |||| ||||||| |||||||||||||  |||||| |||||||| | |||||||||||||||| || ||||||||    
T  45514526 ccttatttattaattttgttacgtctgcagcaatttaatctaattttttcccgttcatttactttattagt-ttgcaattatttaacctaataaatttca 45514428  T
Q  360 tct 362  Q
    |||    
T  45514427 tct 45514425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 266 - 347
Target Start/End: Complemental strand, 47519956 - 47519875
Alignment:
Q  266 ttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaacc 347  Q
    |||||||||||||||| |  |||| ||||||||||||||||||||| |||||||||||||||||  ||| ||||||||||||    
T  47519956 ttattaattttgttagttttgcagcaatttaacctaattttttcccgctcatttgctttattaagtttgtaattatttaacc 47519875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 261 - 362
Target Start/End: Complemental strand, 20877323 - 20877222
Alignment:
Q  261 cttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcat 360  Q
    ||||||||||||||||||||  || |||| ||||||| ||||||||||||| ||||||| ||||||||   |||   |||||||||| ||||||||||||    
T  20877323 cttatttattaattttgttacgtctgcagcaatttaatctaattttttccctctcatttactttattaggtttgtcgttatttaacctaacaaatttcat 20877224  T
Q  361 ct 362  Q
    ||    
T  20877223 ct 20877222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 289 - 362
Target Start/End: Original strand, 24365761 - 24365834
Alignment:
Q  289 gtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatct 362  Q
    ||||||||||||||||||||||| |||||||| |||||||   |||||||||||||||| ||| ||||||||||    
T  24365761 gtaatttaacctaattttttcccgctcatttgatttattaggtttgcaattatttaacctaacgaatttcatct 24365834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 262 - 356
Target Start/End: Complemental strand, 38887686 - 38887590
Alignment:
Q  262 ttatttattaattttgttagatccgcagtaatttaacctaatt--ttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatt 356  Q
    ||||||||||||||| |||| || |||| ||||||||||||||  |||| || ||||||||||||||||   |||||||||||||||| ||||||||    
T  38887686 ttatttattaattttattaggtctgcagcaatttaacctaatttttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaatt 38887590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 290 - 347
Target Start/End: Original strand, 47519954 - 47520011
Alignment:
Q  290 taatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaacc 347  Q
    |||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||    
T  47519954 taatttaacctaattttttcccgctcatttgctttattagggttgcaattatttaacc 47520011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 260 - 356
Target Start/End: Complemental strand, 16015358 - 16015262
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatt 356  Q
    |||||||||||| ||||||||| ||  | | ||||||||||||||||||||| ||||||||||||||||   |  ||||||||||||| ||||||||    
T  16015358 ccttatttattagttttgttaggtctacggaaatttaacctaattttttcccgctcatttgctttattaggttaacaattatttaacctaacaaatt 16015262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 329
Target Start/End: Original strand, 43819330 - 43819395
Alignment:
Q  264 atttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaa 329  Q
    |||||||||||||||||| || |||| ||||||||||||| ||||||| |||||||||| ||||||    
T  43819330 atttattaattttgttaggtctgcagcaatttaacctaatattttcccgctcatttgctgtattaa 43819395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 291 - 362
Target Start/End: Complemental strand, 47503304 - 47503232
Alignment:
Q  291 aatttaacctaatttttt-cccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatct 362  Q
    ||||||||||| |||||| ||| ||||||||||||||||   |||||||||||||||| ||||||||||||||    
T  47503304 aatttaacctattttttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatct 47503232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 362
Target Start/End: Original strand, 46451320 - 46451383
Alignment:
Q  299 ctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatct 362  Q
    ||||||||| ||| ||||||||||||||||   |||||||||||||||| ||||||||||||||    
T  46451320 ctaatttttccccgctcatttgctttattagatttgcaattatttaacctaacaaatttcatct 46451383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 3847823 - 3847885
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgct 322  Q
    |||||||||||||||||||||| || |||| ||||||||||||| ||||| | ||||||||||    
T  3847823 ccttatttattaattttgttaggtctgcagcaatttaacctaatattttcgcgctcatttgct 3847885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 11522530 - 11522632
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||| ||  ||  |||||||||||||||||| |   ||||||| |||||||   || ||||| ||||||| |||||||||||    
T  11522530 ccttatttattaattttgttaggtctacaacaatttaacctaatttttttcagttcatttgttttattaggtttacaattgtttaacctaacaaatttca 11522629  T
Q  360 tct 362  Q
    |||    
T  11522630 tct 11522632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 357
Target Start/End: Original strand, 51654074 - 51654139
Alignment:
Q  292 atttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaattt 357  Q
    |||||||||||||||||||| |||||||| |||||||   || ||||||||||||| |||||||||    
T  51654074 atttaacctaattttttcccgctcatttgttttattaggtttacaattatttaacctaacaaattt 51654139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 11453935 - 11454038
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcc-cactcatttgctttattaatgttgcaattatttaaccaaacaaatttc 358  Q
    |||||||||||||||||||||  |  | | |||||||| |||||||||| | |  |||||||||||||||   |||||||||||||||| |||||||| |    
T  11453935 ccttatttattaattttgttacgtttgaaataatttaatctaatttttttctcgttcatttgctttattaggtttgcaattatttaacctaacaaattac 11454034  T
Q  359 atct 362  Q
    ||||    
T  11454035 atct 11454038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 11454379 - 11454483
Alignment:
Q  260 ccttatttattaattttgtt---agatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatt 356  Q
    ||||||||||||||||||||   |  || |||| |||||| ||||||||||||   ||||||||||||||||   |||||||||||||||| |||||| |    
T  11454379 ccttatttattaattttgttgttacgtctgcagcaatttatcctaattttttctg-ctcatttgctttattaggcttgcaattatttaacctaacaaact 11454477  T
Q  357 tcatct 362  Q
    ||||||    
T  11454478 tcatct 11454483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 850930 - 851032
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||  || ||  | || |||||||| ||||||||| || |||||||  |||||||   ||||||||||||||   |||||||||||    
T  850930 ccttatttattaatttttgtacatttgtagcaatttaacttaatttttttccgctcatttattttattaggtttgcaattatttaagttaacaaatttca 851029  T
Q  360 tct 362  Q
    |||    
T  851030 tct 851032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 362
Target Start/End: Original strand, 11220780 - 11220876
Alignment:
Q  265 tttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatct 362  Q
    ||||||||||||||||| || |||| ||||||||||||| |||| || || ||||||| |||||   | ||| | |||| ||| ||||||||||||||    
T  11220780 tttattaattttgttaggtctgcagcaatttaacctaatatttttcc-cttatttgctgtattaggttagcagtaattttacctaacaaatttcatct 11220876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 17755736 - 17755777
Alignment:
Q  262 ttatttattaattttgttagatccgcagtaatttaacctaat 303  Q
    ||||||||||||||| |||| ||||||| |||||||||||||    
T  17755736 ttatttattaattttattaggtccgcagcaatttaacctaat 17755777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 19057056 - 19057097
Alignment:
Q  262 ttatttattaattttgttagatccgcagtaatttaacctaat 303  Q
    ||||||||||||||| |||| ||||||| |||||||||||||    
T  19057056 ttatttattaattttattaggtccgcagcaatttaacctaat 19057097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 3e-30; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 260 - 359
Target Start/End: Original strand, 23622216 - 23622315
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||| || ||| ||||||||||||| |||||||||||||||||||||||||   |||||||||||||||| |||||||||||    
T  23622216 ccttatttattaattttgttaggtctgcaataatttaacctaactttttcccactcatttgctttattaggtttgcaattatttaacctaacaaatttca 23622315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 262 - 362
Target Start/End: Original strand, 808829 - 808930
Alignment:
Q  262 ttatttattaattttgttagatccgcagtaatttaacctaatttt-ttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcat 360  Q
    |||| ||||||||||||||| || |||| |||||||||||||||| ||||||||||||||||||||||   |||||||||||||||||||||||||||||    
T  808829 ttatctattaattttgttaggtctgcagcaatttaacctaatttttttcccactcatttgctttattaggtttgcaattatttaaccaaacaaatttcat 808928  T
Q  361 ct 362  Q
    ||    
T  808929 ct 808930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 260 - 356
Target Start/End: Original strand, 27579596 - 27579692
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatt 356  Q
    |||||||||||||||||||| | || |||  ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||||    
T  27579596 ccttatttattaattttgttcggtctgcaacaatttaacctaattttttcccactcatttgctttattaggtttgcaattatttaacctaacaaatt 27579692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 17202848 - 17202950
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||| ||||||||||| || |||| ||||||||||||||||||||| | ||||||||||||||   |||||||||||||||| |||||||| ||    
T  17202848 ccttatttataaattttgttaggtctgcagcaatttaacctaattttttcccgcccatttgctttattagatttgcaattatttaacctaacaaattcca 17202947  T
Q  360 tct 362  Q
    |||    
T  17202948 tct 17202950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 17906908 - 17906806
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||| |  |||| ||||||||||||||||||||  ||||||||||||||||   ||| |||||||||||| |||||||| ||    
T  17906908 ccttatttattaattttgttaggtttgcagcaatttaacctaattttttccagctcatttgctttattaggtttgtaattatttaacctaacaaattcca 17906809  T
Q  360 tct 362  Q
    |||    
T  17906808 tct 17906806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 354
Target Start/End: Original strand, 25068186 - 25068280
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaa 354  Q
    |||||||||||||||||||||  || |||| |||||||||||||||||| || ||||||||||||||||   |||||||||||||||| ||||||    
T  25068186 ccttatttattaattttgttacgtctgcagcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaa 25068280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 262 - 362
Target Start/End: Original strand, 9828919 - 9829019
Alignment:
Q  262 ttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatc 361  Q
    ||||| |||||||||||||  || |||| |||||||| |||||||||||| ||||||||||||||||   |||||||||||||||| |||||||| ||||    
T  9828919 ttattaattaattttgttacctctgcagcaatttaacttaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 9829018  T
Q  362 t 362  Q
    |    
T  9829019 t 9829019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 23610430 - 23610532
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaa-ttttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttc 358  Q
    |||||||||||||||||||||| || |||  |||||||||||| ||||||||| ||||||||||||||| | ||| ||||||||||||| |||||||| |    
T  23610430 ccttatttattaattttgttaggtctgcaacaatttaacctaatttttttcccgctcatttgctttatt-aggtttcaattatttaacctaacaaattcc 23610528  T
Q  359 atct 362  Q
    ||||    
T  23610529 atct 23610532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 808470 - 808556
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaac 346  Q
    |||||||||||||||||||||| || |||| |||||||| |||||||||| | ||||||||||||||||   |||||||||||||||    
T  808470 ccttatttattaattttgttagttctgcagcaatttaacgtaattttttctcgctcatttgctttattagatttgcaattatttaac 808556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 4811170 - 4811068
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    ||||||||||| |||||||||  || |||| ||||||||||||||||||||| ||| ||||||||||||   |||||||||||||||| ||| |||| ||    
T  4811170 ccttatttatttattttgttacgtctgcagcaatttaacctaattttttcccgctcgtttgctttattaggtttgcaattatttaacctaactaattcca 4811071  T
Q  360 tct 362  Q
    |||    
T  4811070 tct 4811068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 17201595 - 17201697
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||  || |||  |||||||||||| ||||| || |||||||| |||||||   |||||||||||||||| |||||||||||    
T  17201595 ccttatttattaattttgttacgtctgcaacaatttaacctaacttttttccgctcatttgttttattaggtttgcaattatttaacctaacaaatttca 17201694  T
Q  360 tct 362  Q
    |||    
T  17201695 tct 17201697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 25067960 - 25068062
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||| |||||||||||| ||| |||| |||||||||||||||||| || |||||||||||||| |   |||||||||||||||  |||||||| ||    
T  25067960 ccttatttgttaattttgttacatctgcagcaatttaacctaatttttttccgctcatttgctttataaggtttgcaattatttaacataacaaattaca 25068059  T
Q  360 tct 362  Q
    |||    
T  25068060 tct 25068062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 260 - 328
Target Start/End: Original strand, 29201556 - 29201624
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttatta 328  Q
    |||||||||||||||||||||| || |||| |||||||||||||||||| || ||||||||||||||||    
T  29201556 ccttatttattaattttgttaggtctgcagcaatttaacctaatttttttccgctcatttgctttatta 29201624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 262 - 356
Target Start/End: Original strand, 27315287 - 27315380
Alignment:
Q  262 ttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatt 356  Q
    |||||||||||||||||| | || |||| || ||||||||||||||| ||||| |||||||||||||   |||||||||||||||| ||||||||    
T  27315287 ttatttattaattttgttcggtctgcagcaacttaacctaatttttt-ccactaatttgctttattaggtttgcaattatttaacctaacaaatt 27315380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 4100426 - 4100320
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcc----cactcatttgctttattaatgttgcaattatttaaccaaacaaat 355  Q
    |||||||||||||||||||||| || |||| |||||||||||||||||| |    || | |||||||||||||   |||||||||||||| | |||||||    
T  4100426 ccttatttattaattttgttaggtctgcagcaatttaacctaatttttttccgttcattaatttgctttattatgtttgcaattatttaagctaacaaat 4100327  T
Q  356 ttcatct 362  Q
    | |||||    
T  4100326 tccatct 4100320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 260 - 328
Target Start/End: Original strand, 17199984 - 17200052
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttatta 328  Q
    |||||||||||||||||||||| || | || ||||||||||||| ||||||| |||||||||| |||||    
T  17199984 ccttatttattaattttgttaggtctgtagcaatttaacctaatattttccctctcatttgctatatta 17200052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 260 - 388
Target Start/End: Complemental strand, 32208515 - 32208387
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaatta-tttaaccaaacaaatttc 358  Q
    |||||||||||||||||| ||| || |||  ||||||| |||||||||| || ||||||||||||||||   ||||||||| ||||||| |||||||| |    
T  32208515 ccttatttattaattttgctaggtctgcaacaatttaatctaatttttt-ccgctcatttgctttattaggtttgcaattattttaacctaacaaattcc 32208417  T
Q  359 atctnnnnnnntgcatcacactaatttcat 388  Q
    ||||       ||||||| |||||||||||    
T  32208416 atctagaaaaatgcatcagactaatttcat 32208387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 261 - 356
Target Start/End: Original strand, 15130898 - 15130993
Alignment:
Q  261 cttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatt 356  Q
    ||||||||||||||||||||  || |||| || ||||| ||| | ||| ||||||||| |||||||||   |||||||||||||||| ||||||||    
T  15130898 cttatttattaattttgttacgtctgcagcaacttaacgtaaatattttccactcattcgctttattagatttgcaattatttaacctaacaaatt 15130993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 26832624 - 26832522
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttccca-ctcatttgctttattaatgttgcaattatttaaccaaacaaatttc 358  Q
    ||||||||||||| ||||||||||  |||  |||||||||||||||||| ||| || |||||||||||||   |||||||||||||||  |||||||| |    
T  26832624 ccttatttattaactttgttagatt-gcaacaatttaacctaatttttttccagcttatttgctttattaggtttgcaattatttaacttaacaaattac 26832526  T
Q  359 atct 362  Q
    ||||    
T  26832525 atct 26832522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 260 - 308
Target Start/End: Complemental strand, 4125757 - 4125709
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaatttttt 308  Q
    |||||||||||||||||||||| || |||| ||||||||||||||||||    
T  4125757 ccttatttattaattttgttaggtctgcagcaatttaacctaatttttt 4125709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 260 - 309
Target Start/End: Original strand, 19121167 - 19121216
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttc 309  Q
    ||||||||||||||||||||||||| |||| ||||||| ||||| |||||    
T  19121167 ccttatttattaattttgttagatctgcagcaatttaatctaatattttc 19121216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 362
Target Start/End: Original strand, 17202661 - 17202731
Alignment:
Q  293 tttaacctaattttttcc-cactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatct 362  Q
    |||||||||||||||| | | ||||||||||||||||   |||||||||||||| | |||||||| |||||    
T  17202661 tttaacctaatttttttcacgctcatttgctttattaggtttgcaattatttaatctaacaaattccatct 17202731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 1e-29; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 18486632 - 18486734
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||| |  |||| ||||||||||||||||||||| ||||||||||||||||   |||||||||||||||| |||||||||||    
T  18486632 ccttatttattaattttgttaggtttgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttca 18486731  T
Q  360 tct 362  Q
    |||    
T  18486732 tct 18486734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 23591521 - 23591419
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    ||||||||||||||||||||||||| |||  ||||||||||||||||||||| ||||||||||||||||   |||||||||||||||| |||||||| ||    
T  23591521 ccttatttattaattttgttagatctgcaacaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattcca 23591422  T
Q  360 tct 362  Q
    |||    
T  23591421 tct 23591419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 4681003 - 4680901
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||  || |||| ||||||||||||||||||||| ||||||||||||||||   |||||||||||||||| |||||||| ||    
T  4681003 ccttatttattaattttgttacgtctgcagcaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattcca 4680904  T
Q  360 tct 362  Q
    |||    
T  4680903 tct 4680901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 9142068 - 9141966
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||  || |||| ||||||||||||||||||||  ||||||||||||||||   |||||||||||||||| |||||||||||    
T  9142068 ccttatttattaattttgttatgtctgcagcaatttaacctaattttttcctgctcatttgctttattaggtttgcaattatttaacctaacaaatttca 9141969  T
Q  360 tct 362  Q
    |||    
T  9141968 tct 9141966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 11650115 - 11650013
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||| || |||  ||||||||||||||||||||| ||||||||||||||||   |||||||||||||||| |||||||| ||    
T  11650115 ccttatttattaattttgttaggtctgcaacaatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattcca 11650016  T
Q  360 tct 362  Q
    |||    
T  11650015 tct 11650013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 27716416 - 27716314
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||| ||   || ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| |||||||| ||    
T  27716416 ccttatttattaattttgttaggtctctagcaatttaacctaattttttcccactcatttgctttattaggtttgcaattatttaacctaacaaattcca 27716317  T
Q  360 tct 362  Q
    |||    
T  27716316 tct 27716314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 45419743 - 45419641
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||    ||||||||||||||||   |||||||||||||||| |||||||||||    
T  45419743 ccttatttattaattttgttaggtctgcagtaatttaacctaatttttttaagctcatttgctttattaggtttgcaattatttaacctaacaaatttca 45419644  T
Q  360 tct 362  Q
    |||    
T  45419643 tct 45419641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 48640908 - 48640806
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    ||||||||||||||||||| || || |||| ||||||||||||||| ||||| ||||||||||||||||   |||||||||||||||| |||||||||||    
T  48640908 ccttatttattaattttgtaaggtctgcagcaatttaacctaatttcttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttca 48640809  T
Q  360 tct 362  Q
    |||    
T  48640808 tct 48640806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 260 - 360
Target Start/End: Complemental strand, 9142240 - 9142140
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||| || ||| |||||||||||||||||||||| |||||||||||||||    |||||||||||||||| |||| ||||||    
T  9142240 ccttatttattaattttgttaggtctgcaataatttaacctaattttttcccgctcatttgctttatttggtttgcaattatttaacctaacacatttca 9142141  T
Q  360 t 360  Q
    |    
T  9142140 t 9142140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 12140968 - 12140866
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||  || |||| |||||||||||||||||| || ||||||||| ||||||   |||||||||||||||| |||||||||||    
T  12140968 ccttatttattaattttgttacgtctgcagcaatttaacctaatttttttccgctcatttgcgttattaggtttgcaattatttaacctaacaaatttca 12140869  T
Q  360 tct 362  Q
    |||    
T  12140868 tct 12140866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 48641123 - 48641021
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||| || | || |||||||| || ||||||||| ||||||||||||||||   ||||||||||||||||||| ||||||||    
T  48641123 ccttatttattaattttgttaggtctgtagcaatttaacatagttttttcccgctcatttgctttattaggtttgcaattatttaaccaaaaaaatttca 48641024  T
Q  360 tct 362  Q
    |||    
T  48641023 tct 48641021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 260 - 388
Target Start/End: Complemental strand, 16492651 - 16492524
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||| || |||| |||||||| || ||||||||  ||||||||||||||||   |||||||||||||||| |||||||||||    
T  16492651 ccttatttattaattttgttaggtctgcagcaatttaacttatttttttccg-ctcatttgctttattatgtttgcaattatttaacctaacaaatttca 16492553  T
Q  360 tctnnnnnnntgcatcacactaatttcat 388  Q
    |||       |||||| ||||||||||||    
T  16492552 tctaaaaaagtgcatcgcactaatttcat 16492524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 21224136 - 21224238
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||| || |||| |||||||||||||||||| || || |||||||||||||   || ||||||||||||| ||||| |||||    
T  21224136 ccttatttattaattttgttaggtctgcagcaatttaacctaatttttttccgctaatttgctttattaggtttacaattatttaacctaacaagtttca 21224235  T
Q  360 tct 362  Q
    |||    
T  21224236 tct 21224238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 358
Target Start/End: Complemental strand, 40450208 - 40450110
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttc 358  Q
    |||||||||||||||||||||| || |||| ||||||||||||||| |||   ||||||||||||||||   |||||||||||||||| ||||||||||    
T  40450208 ccttatttattaattttgttaggtctgcagcaatttaacctaatttattcgtgctcatttgctttattagatttgcaattatttaacctaacaaatttc 40450110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 262 - 362
Target Start/End: Complemental strand, 2527059 - 2526958
Alignment:
Q  262 ttatttattaattttgttagatccgcagtaatttaacctaatt-ttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcat 360  Q
    |||||||||||||||||||| || |||| |||||||||||||| ||||||| ||||||||||||||||   |||||||||||||||| ||| |||| |||    
T  2527059 ttatttattaattttgttaggtctgcagcaatttaacctaatttttttcccgctcatttgctttattaggtttgcaattatttaacctaactaattacat 2526960  T
Q  361 ct 362  Q
    ||    
T  2526959 ct 2526958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 260 - 360
Target Start/End: Complemental strand, 11646038 - 11645938
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||  || |||  || |||||||||||||||||| ||||||||||||||||   ||| |||||||||||| |||||||||||    
T  11646038 ccttatttattaattttgttacgtctgcaacaacttaacctaattttttcccgctcatttgctttattaggtttgtaattatttaacctaacaaatttca 11645939  T
Q  360 t 360  Q
    |    
T  11645938 t 11645938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 262 - 362
Target Start/End: Original strand, 16671605 - 16671705
Alignment:
Q  262 ttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatc 361  Q
    |||||| || |||||||||| || |||| ||| ||||||||||||||||| ||||||||||||||||   |||||||||||||||| |||||||| ||||    
T  16671605 ttatttttttattttgttaggtctgcagcaatataacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 16671704  T
Q  362 t 362  Q
    |    
T  16671705 t 16671705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 262 - 362
Target Start/End: Original strand, 17645973 - 17646073
Alignment:
Q  262 ttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatc 361  Q
    |||||| || |||||||||| || |||| ||| ||||||||||||||||| ||||||||||||||||   |||||||||||||||| |||||||| ||||    
T  17645973 ttatttttttattttgttaggtctgcagcaatataacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaattccatc 17646072  T
Q  362 t 362  Q
    |    
T  17646073 t 17646073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 291 - 388
Target Start/End: Original strand, 18487180 - 18487277
Alignment:
Q  291 aatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatctnnnnnnntgcatcacactaatttcat 388  Q
    ||||||||||||||||||||| ||||||||||||||||   |||||||||||||||| ||||||||||||||       |||||||||| ||||||||    
T  18487180 aatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttcatctaaaaaaatgcatcacaccaatttcat 18487277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 27716638 - 27716536
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||| |   ||| |||||||||||||||| |||| ||||||||||||||||   |||||||||||||||| ||||| || ||    
T  27716638 ccttatttattaattttgttaggttttcagcaatttaacctaattttatcccgctcatttgctttattaggtttgcaattatttaacctaacaacttcca 27716539  T
Q  360 tct 362  Q
    |||    
T  27716538 tct 27716536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 264 - 356
Target Start/End: Complemental strand, 11646312 - 11646220
Alignment:
Q  264 atttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatt 356  Q
    |||||||||||||||||  || |||| || ||||||||||||||| ||||||||||||||| |||   |||||||||||||||| ||||||||    
T  11646312 atttattaattttgttatgtctgcagcaacttaacctaatttttttccactcatttgctttgttaggtttgcaattatttaacctaacaaatt 11646220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 260 - 356
Target Start/End: Complemental strand, 11646504 - 11646408
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatt 356  Q
    |||||||||||||||||||||  || |||| || |||| |||||||||| || ||||||||||||||||   |||||||||||||||| ||||||||    
T  11646504 ccttatttattaattttgttacgtctgcagcaacttaatctaatttttttccgctcatttgctttattaggtttgcaattatttaacctaacaaatt 11646408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 260 - 388
Target Start/End: Original strand, 19222103 - 19222232
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaa-ttttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttc 358  Q
    |||||||||||||||||||||| || |||| |||||||||||| |||||| ||  |||||||||||||||   || ||||||||||||| |||||||| |    
T  19222103 ccttatttattaattttgttagttctgcagcaatttaacctaattttttttccgttcatttgctttattaggtttacaattatttaacctaacaaattcc 19222202  T
Q  359 atctnnnnnnntgcatcacactaatttcat 388  Q
    ||||       |||||||||| ||||||||    
T  19222203 atctaaaaatatgcatcacaccaatttcat 19222232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 262 - 362
Target Start/End: Original strand, 22324284 - 22324384
Alignment:
Q  262 ttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatc 361  Q
    |||||||||||||||||||| || |||| |||||||||||||| |||||| ||||||| |||| |||   ||| ||||||| |||| |||||||||||||    
T  22324284 ttatttattaattttgttaggtctgcagcaatttaacctaattgtttcccgctcatttacttttttaggtttgtaattattcaacctaacaaatttcatc 22324383  T
Q  362 t 362  Q
    |    
T  22324384 t 22324384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 262 - 362
Target Start/End: Complemental strand, 48641546 - 48641447
Alignment:
Q  262 ttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatc 361  Q
    ||||||||||||||| |||  || |||| || |||||||||||||| ||  |||||||||||||||||  |||||||||||||||| |||||||||||||    
T  48641546 ttatttattaattttcttacgtctgcaggaacttaacctaattttt-cctgctcatttgctttattaagtttgcaattatttaacctaacaaatttcatc 48641448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 34837185 - 34837288
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaa-ttttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttc 358  Q
    |||||||||||||||||||||| || |||| |||||||||||| |||||| || || |||||||||||||   || ||||||||||||| |||||||| |    
T  34837185 ccttatttattaattttgttaggtctgcagcaatttaacctaattttttttccgcttatttgctttattaggtttacaattatttaacctaacaaattcc 34837284  T
Q  359 atct 362  Q
    ||||    
T  34837285 atct 34837288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 22774017 - 22773916
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||  || |||  ||||||||||||||||| ||| ||||||||||||| ||   |||||||||||||| | |||||||||||    
T  22774017 ccttatttattaattttgttacgtctgcaacaatttaacctaattttt-cccgctcatttgctttactatgtttgcaattatttaatctaacaaatttca 22773919  T
Q  360 tct 362  Q
    |||    
T  22773918 tct 22773916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 261 - 362
Target Start/End: Complemental strand, 2354771 - 2354670
Alignment:
Q  261 cttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcat 360  Q
    ||||||||||||||||||||| || |||| |||||||| |||| ||||||  ||||||||||||||||   ||||||||||||||   |||||||| |||    
T  2354771 cttatttattaattttgttaggtctgcagcaatttaacgtaatgttttccagctcatttgctttattaggtttgcaattatttaatataacaaattccat 2354672  T
Q  361 ct 362  Q
    ||    
T  2354671 ct 2354670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 260 - 345
Target Start/End: Complemental strand, 32278243 - 32278158
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaa 345  Q
    ||||||||||||||| |||||  || |||| ||||||||||||||||||||| ||||||| ||||||||   ||||||||||||||    
T  32278243 ccttatttattaattatgttacgtctgcagcaatttaacctaattttttcccgctcatttactttattaggtttgcaattatttaa 32278158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 260 - 328
Target Start/End: Original strand, 11646625 - 11646693
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttatta 328  Q
    |||||||||||||||||||||  || |||| |||||||||||||||||| || ||||||||||||||||    
T  11646625 ccttatttattaattttgttacgtctgcagcaatttaacctaatttttttccgctcatttgctttatta 11646693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 291 - 362
Target Start/End: Complemental strand, 4681221 - 4681150
Alignment:
Q  291 aatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatct 362  Q
    ||||||||||||||||||||| ||||||||||||||||   |||||||||||||||| || ||||| |||||    
T  4681221 aatttaacctaattttttcccgctcatttgctttattatgtttgcaattatttaacctaataaattccatct 4681150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 16671244 - 16671346
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaa-tttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttc 358  Q
    |||||||||||||||||||||| || |||| || ||||||| ||| |||| || |||||||||| |||||   |||||||||||||||| ||||||||||    
T  16671244 ccttatttattaattttgttaggtctgcagcaattttaaccaaatatttt-ccgctcatttgctctattaggtttgcaattatttaacctaacaaatttc 16671342  T
Q  359 atct 362  Q
    ||||    
T  16671343 atct 16671346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 17645612 - 17645714
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaa-tttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttc 358  Q
    |||||||||||||||||||||| || |||| || ||||||| ||| |||| || |||||||||| |||||   |||||||||||||||| ||||||||||    
T  17645612 ccttatttattaattttgttaggtctgcagcaattttaaccaaatatttt-ccgctcatttgctctattaggtttgcaattatttaacctaacaaatttc 17645710  T
Q  359 atct 362  Q
    ||||    
T  17645711 atct 17645714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 261 - 362
Target Start/End: Original strand, 34837441 - 34837541
Alignment:
Q  261 cttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcat 360  Q
    |||||||||| |||||||||| ||  ||| |||||||| |||||||||||  ||||||| ||||||||   |||||||||||| ||| ||||||||||||    
T  34837441 cttatttatttattttgttaggtcttcagcaatttaacataattttttccg-ctcatttactttattaggtttgcaattattttacctaacaaatttcat 34837539  T
Q  361 ct 362  Q
    ||    
T  34837540 ct 34837541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 260 - 356
Target Start/End: Complemental strand, 46264391 - 46264294
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaatttttt-cccactcatttgctttattaatgttgcaattatttaaccaaacaaatt 356  Q
    |||||||||||||||||||||  || |||  || | ||||||||||||| ||| ||||||||||||||||   |||||||||||||||| ||||||||    
T  46264391 ccttatttattaattttgttacgtctgcaacaactcaacctaatttttttccccctcatttgctttattaggtttgcaattatttaacctaacaaatt 46264294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 260 - 356
Target Start/End: Original strand, 21128038 - 21128134
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatt 356  Q
    |||||||||||||||||||||| || |||| | ||||||||||| |||| || || |||||||||||||   || || |||||||||| ||||||||    
T  21128038 ccttatttattaattttgttaggtctgcagcagtttaacctaatctttttccgctgatttgctttattacgtttccatttatttaacctaacaaatt 21128134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 23591738 - 23591636
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||| ||  |  |||  |||| || |||||||||||||  |||||||||||||||   |||||||||||||||| |||||||| ||    
T  23591738 ccttatttattaattttgctaagtgtgcaacaattgaagctaattttttccctttcatttgctttattaggtttgcaattatttaacctaacaaattcca 23591639  T
Q  360 tct 362  Q
    |||    
T  23591638 tct 23591636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 260 - 328
Target Start/End: Complemental strand, 23591306 - 23591238
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttatta 328  Q
    |||||||||| ||||||||||| ||  |   ||||||||||||||||||||| ||||||||||||||||    
T  23591306 ccttatttataaattttgttaggtctactacaatttaacctaattttttcccgctcatttgctttatta 23591238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 260 - 356
Target Start/End: Original strand, 35124723 - 35124819
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatt 356  Q
    |||||||||||||| ||||||| |  |||  |||||||| |||||||||  |  |||||||||||||||   |||||||||||||||| ||||||||    
T  35124723 ccttatttattaatgttgttaggtttgcaacaatttaacttaattttttgtcgttcatttgctttattaggtttgcaattatttaacctaacaaatt 35124819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 294 - 362
Target Start/End: Original strand, 43059223 - 43059291
Alignment:
Q  294 ttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatct 362  Q
    |||||||||||||||| | ||||||||||||||||   |||||||||||||| | |||||||| |||||    
T  43059223 ttaacctaattttttctcgctcatttgctttattaggtttgcaattatttaatctaacaaattccatct 43059291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 263 - 362
Target Start/End: Complemental strand, 45419947 - 45419847
Alignment:
Q  263 tatttattaattttgttagatccgcagtaatttaacctaattttttc-ccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatc 361  Q
    ||||||||||||||||||| || |||  ||| ||||||| ||||||  || ||||||||||||||||   ||| |||||||||||| |||||||| ||||    
T  45419947 tatttattaattttgttaggtctgcatcaatctaacctatttttttttccgctcatttgctttattaggtttgtaattatttaacctaacaaattccatc 45419848  T
Q  362 t 362  Q
    |    
T  45419847 t 45419847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 2853325 - 2853222
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccact-catttgctttattaatgttgcaattatttaaccaaacaaatttc 358  Q
    |||| |||||||||||||||| ||  | |  ||||||||||||||||||  || | |||||| |||||||   |||||||||||||||| ||||||||||    
T  2853325 ccttgtttattaattttgttacatttgtatcaatttaacctaattttttttcagttcatttgttttattaggtttgcaattatttaacctaacaaatttc 2853226  T
Q  359 atct 362  Q
    ||||    
T  2853225 atct 2853222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 260 - 309
Target Start/End: Original strand, 34837386 - 34837435
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttc 309  Q
    |||||||||||||||||||||| || |||  |||||||||||||||||||    
T  34837386 ccttatttattaattttgttaggtctgcaacaatttaacctaattttttc 34837435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 362
Target Start/End: Complemental strand, 1566585 - 1566513
Alignment:
Q  291 aatttaacctaattttttcc-cactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatct 362  Q
    ||||||||||||||||||   | | ||||||||||||||   |||||||||||||||| ||||||||||||||    
T  1566585 aatttaacctaatttttttttcgcacatttgctttattaggtttgcaattatttaacctaacaaatttcatct 1566513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 361
Target Start/End: Complemental strand, 16362788 - 16362696
Alignment:
Q  269 ttaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatc 361  Q
    |||||||| |||| |  |||| ||| ||| |||||||||| || |||||||| |||||||   ||||| |||||||||| |||||||||||||    
T  16362788 ttaattttattaggtatgcagcaatgtaatctaatttttttccgctcatttgttttattagatttgcagttatttaacctaacaaatttcatc 16362696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 362
Target Start/End: Original strand, 30991488 - 30991560
Alignment:
Q  291 aatttaacctaattttttc-ccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatct 362  Q
    |||||||| |||||||||  || ||||||||||||||||   |||||||||||||||| |||||||| |||||    
T  30991488 aatttaacttaattttttttccgctcatttgctttattatgtttgcaattatttaacctaacaaattccatct 30991560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 308
Target Start/End: Original strand, 45285651 - 45285699
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaatttttt 308  Q
    |||| |||||||||||| |||| ||||||| ||||||||||||||||||    
T  45285651 ccttgtttattaattttattaggtccgcagaaatttaacctaatttttt 45285699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 260 - 308
Target Start/End: Original strand, 34837653 - 34837701
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaatttttt 308  Q
    |||||||||||| ||||||||| |  |||| ||||||||||||||||||    
T  34837653 ccttatttattagttttgttaggtatgcagcaatttaacctaatttttt 34837701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 7e-28; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 255 - 362
Target Start/End: Complemental strand, 24351584 - 24351477
Alignment:
Q  255 gttaaccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaa 354  Q
    |||| ||||||||||||||||| |||| || ||||||||||||||||||| |||||| |||||||| |||||||   |||||||||||||||| ||||||    
T  24351584 gttatccttatttattaatttttttaggtctgcagtaatttaacctaattatttcccgctcatttgttttattaggtttgcaattatttaacctaacaaa 24351485  T
Q  355 tttcatct 362  Q
    ||||||||    
T  24351484 tttcatct 24351477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 262 - 362
Target Start/End: Complemental strand, 12442258 - 12442158
Alignment:
Q  262 ttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatc 361  Q
    ||||||||||||| |||||| || |||| ||||||||||||||||||||| ||||||||| ||||||   |||||||||||||||| |||||||| ||||    
T  12442258 ttatttattaattatgttaggtctgcagcaatttaacctaattttttcccgctcatttgccttattaggtttgcaattatttaacctaacaaattacatc 12442159  T
Q  362 t 362  Q
    |    
T  12442158 t 12442158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 16529133 - 16529235
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||  || |||| ||||||||||||||||||| | ||||||||||||||||   |||||||||||||||  |||||||| ||    
T  16529133 ccttatttattaattttgttacgtctgcagcaatttaacctaattttttcgcgctcatttgctttattagatttgcaattatttaacgtaacaaattcca 16529232  T
Q  360 tct 362  Q
    |||    
T  16529233 tct 16529235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 31487191 - 31487089
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||| || |||||||||||||||||| ||||||| |||||||||| |||||   | ||| | |||||||| |||||||||||    
T  31487191 ccttatttattaattttgttaggtctgcagtaatttaacctaatattttcccgctcatttgctgtattaggttagcagtaatttaacctaacaaatttca 31487092  T
Q  360 tct 362  Q
    |||    
T  31487091 tct 31487089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 35159702 - 35159803
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||  || |||| ||||||||||| ||||||||| ||||||||||||||||   |||||||||||||||| ||||||||| |    
T  35159702 ccttatttattaattttgttacgtctgcagcaatttaaccta-ttttttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatttta 35159800  T
Q  360 tct 362  Q
    |||    
T  35159801 tct 35159803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 260 - 356
Target Start/End: Original strand, 19121905 - 19122001
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatt 356  Q
    |||||||||||||||||||||| || |||  |||||||||||||||||| | |||||||||||||||||   |||||||| ||||||| ||||||||    
T  19121905 ccttatttattaattttgttaggtctgcatcaatttaacctaatttttttcaactcatttgctttattaggtttgcaattgtttaacctaacaaatt 19122001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 260 - 356
Target Start/End: Original strand, 19122241 - 19122337
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatt 356  Q
    |||||||||||||||||||||| |  |||  |||||||||||||||||| |||||||||||||||||||   |||||||| ||||||| ||||||||    
T  19122241 ccttatttattaattttgttaggtttgcatcaatttaacctaatttttttccactcatttgctttattaggtttgcaattgtttaacctaacaaatt 19122337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 9488177 - 9488075
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||  || |||  |||||||||||||||||| ||  | |||||||||||||   |||||||||||||||| |||||||||||    
T  9488177 ccttatttattaattttgttacgtctgcaacaatttaacctaatttttttccgtttatttgctttattagatttgcaattatttaacctaacaaatttca 9488078  T
Q  360 tct 362  Q
    |||    
T  9488077 tct 9488075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 43395060 - 43394959
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||| ||||  |  |||| ||||||||||||||||||||  ||||||||||||||||   |||||||||||||||| |||||||||||    
T  43395060 ccttatttattaattt-gttacgtttgcagcaatttaacctaattttttcctgctcatttgctttattaggtttgcaattatttaacctaacaaatttca 43394962  T
Q  360 tct 362  Q
    |||    
T  43394961 tct 43394959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 262 - 362
Target Start/End: Complemental strand, 7673325 - 7673224
Alignment:
Q  262 ttatttattaattttgttagatccgcagtaatttaacctaatttttt-cccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcat 360  Q
    |||||||||||||||||||  || |||| |||||||||||||||||| |||  ||||||| |||||||   |||||||||||||||| ||||||||||||    
T  7673325 ttatttattaattttgttacgtctgcagcaatttaacctaatttttttcccgttcatttgttttattaggtttgcaattatttaacctaacaaatttcat 7673226  T
Q  361 ct 362  Q
    ||    
T  7673225 ct 7673224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 260 - 360
Target Start/End: Original strand, 10409523 - 10409623
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||  ||  ||||||||||| ||||||||||||| ||||||| ||| | ||   |||||||||||||||| |||||||||||    
T  10409523 ccttatttattaattttgttacgtctccagtaatttaatctaattttttcccgctcattttcttcactagatttgcaattatttaacctaacaaatttca 10409622  T
Q  360 t 360  Q
    |    
T  10409623 t 10409623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 286 - 362
Target Start/End: Complemental strand, 24351000 - 24350924
Alignment:
Q  286 gcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatct 362  Q
    ||||||||||||||||||| |||||| |||||||| |||||||   |||||||||||||||| ||||||||||||||    
T  24351000 gcagtaatttaacctaattatttcccgctcatttgttttattaggtttgcaattatttaacctaacaaatttcatct 24350924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 260 - 356
Target Start/End: Complemental strand, 41093177 - 41093081
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatt 356  Q
    |||||||||||||||||||||| || |||  ||||||||||||||| ||||  || |||||||||||||   |||||||||||||||| ||||||||    
T  41093177 ccttatttattaattttgttaggtctgcatcaatttaacctaatttattcctgctgatttgctttattaggtttgcaattatttaacctaacaaatt 41093081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 11313977 - 11314080
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaa-ttttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttc 358  Q
    |||||||||||||||||||||  || |||| |||||||||||| |||||| || ||||||||||||||||   |||||||||||||||| || ||||| |    
T  11313977 ccttatttattaattttgttacgtctgcagcaatttaacctaattttttttccgctcatttgctttattaggtttgcaattatttaacctaaaaaattcc 11314076  T
Q  359 atct 362  Q
    ||||    
T  11314077 atct 11314080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 262 - 356
Target Start/End: Complemental strand, 14166289 - 14166194
Alignment:
Q  262 ttatttattaattttgttagatccgcagtaatttaacctaa-ttttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatt 356  Q
    |||||||||||||||||||| || ||||||||||||| ||| ||||||  || |||||||||||||||   |||||||||||||||| ||||||||    
T  14166289 ttatttattaattttgttaggtctgcagtaatttaacttaatttttttttcagtcatttgctttattatgtttgcaattatttaacctaacaaatt 14166194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 260 - 355
Target Start/End: Complemental strand, 26523363 - 26523268
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaat 355  Q
    |||||||||||||||||||||  || |||  ||||||||||||||||||||| || |||||||||||||   |||||||||||| ||| |||||||    
T  26523363 ccttatttattaattttgttatgtctgcatcaatttaacctaattttttcccgcttatttgctttattaggtttgcaattatttgacctaacaaat 26523268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 7127557 - 7127659
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||  |  |||| ||||||||||||||||||||  ||||||||||| ||||   |||||||||||||| | |||||||| ||    
T  7127557 ccttatttattaattttgttacgtttgcagcaatttaacctaattttttcctgctcatttgcttgattaggtttgcaattatttaaactaacaaattcca 7127656  T
Q  360 tct 362  Q
    |||    
T  7127657 tct 7127659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 26523267 - 26523165
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||  || |||  |||||||||||||||||| || ||||||||||||||||   |||||||||||| | | |||||||| ||    
T  26523267 ccttatttattaattttgttatgtctgcatcaatttaacctaatttttttccgctcatttgctttattaggtttgcaattatttgatctaacaaattcca 26523168  T
Q  360 tct 362  Q
    |||    
T  26523167 tct 26523165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 260 - 356
Target Start/End: Original strand, 16526195 - 16526292
Alignment:
Q  260 ccttatttattaa-ttttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatt 356  Q
    ||||||||||||| ||||||||  || |||  ||||||||||||||||||  ||||||||||||||||||   |||||||||||||||| ||||||||    
T  16526195 ccttatttattaaattttgttacgtctgcatcaatttaacctaattttttttcactcatttgctttattaggtttgcaattatttaacctaacaaatt 16526292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 260 - 356
Target Start/End: Original strand, 11313638 - 11313734
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatt 356  Q
    ||||||||||||||||| |||  ||  ||  ||||||||||||||||||||| ||||||| ||||||||   |||||||||||||||| ||||||||    
T  11313638 ccttatttattaatttttttacgtctacaacaatttaacctaattttttcccgctcattttctttattaggtttgcaattatttaacctaacaaatt 11313734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 260 - 356
Target Start/End: Complemental strand, 41092997 - 41092902
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatt 356  Q
    |||||||||||||||||||||| || |||  ||||||||||||||| || || ||| ||||||||||||   |||||||||||||||| ||||||||    
T  41092997 ccttatttattaattttgttaggtctgcatcaatttaacctaatttatt-ccgctcttttgctttattaggtttgcaattatttaacctaacaaatt 41092902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 267 - 362
Target Start/End: Original strand, 11313807 - 11313902
Alignment:
Q  267 tattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatct 362  Q
    ||||||||||||||  || |||  ||||||||||||||||||||| | ||||| ||||||||   |||||||||||||||| |||||||| |||||    
T  11313807 tattaattttgttacgtctgcaacaatttaacctaattttttcccgcacattttctttattaggtttgcaattatttaacctaacaaattccatct 11313902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 261 - 356
Target Start/End: Original strand, 16528599 - 16528694
Alignment:
Q  261 cttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatt 356  Q
    ||||||||||||||||||||  ||  ||  ||||||||||||  ||||||| ||||||||||||||||   |||||||||||||||| ||||||||    
T  16528599 cttatttattaattttgttacgtctacaacaatttaacctaacattttcccgctcatttgctttattaggtttgcaattatttaacctaacaaatt 16528694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 16528957 - 16529057
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||  || |||| ||||||||||||  ||||||  ||||||||| ||||||   |||||||||||||||| ||||||||| |    
T  16528957 ccttatttattaattttgttacgtctgcagcaatttaacctaa--ttttcctgctcatttgccttattaggtttgcaattatttaacctaacaaatttaa 16529054  T
Q  360 tct 362  Q
    |||    
T  16529055 tct 16529057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 346
Target Start/End: Original strand, 24326554 - 24326609
Alignment:
Q  291 aatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaac 346  Q
    ||||||||||||||||||||| ||||||||||||||||   |||||||||||||||    
T  24326554 aatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaac 24326609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 346
Target Start/End: Complemental strand, 24350787 - 24350732
Alignment:
Q  291 aatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaac 346  Q
    ||||||||||||||||||||| ||||||||||||||||   |||||||||||||||    
T  24350787 aatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaac 24350732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 346
Target Start/End: Complemental strand, 24351341 - 24351286
Alignment:
Q  291 aatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaac 346  Q
    ||||||||||||||||||||| ||||||||||||||||   |||||||||||||||    
T  24351341 aatttaacctaattttttcccgctcatttgctttattaggtttgcaattatttaac 24351286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 23138030 - 23138115
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaac 346  Q
    |||||||||||||||| ||||| || |||| | |||||||||||||||| || ||||||||||||||||   |||||||||| ||||    
T  23138030 ccttatttattaatttcgttaggtctgcagcattttaacctaatttttt-ccgctcatttgctttattaggtttgcaattatataac 23138115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 16528775 - 16528881
Alignment:
Q  260 ccttatttattaattttgttagatccg----cagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaat 355  Q
    |||||||||||||||||||| | | ||    ||| ||||||||||||||||||||| ||||||||| ||||||   |||||| ||||||||| ||||| |    
T  16528775 ccttatttattaattttgtttgttacgtctgcagcaatttaacctaattttttcccgctcatttgccttattaggtttgcaaatatttaacctaacaact 16528874  T
Q  356 ttcatct 362  Q
    | |||||    
T  16528875 tccatct 16528881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 16305346 - 16305446
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||| |  | | |||||||| ||||||||  ||| ||||||||||||||||   |||||||||||||| | || ||||| ||    
T  16305346 ccttatttattaattttgttaggtttgtaataatttaaactaatttt--cccgctcatttgctttattaggtttgcaattatttaatctaataaattcca 16305443  T
Q  360 tct 362  Q
    |||    
T  16305444 tct 16305446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 356
Target Start/End: Complemental strand, 43395208 - 43395142
Alignment:
Q  290 taatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatt 356  Q
    ||||||||| | |||||||||| ||||||||||||||||   || ||||||||||||| ||||||||    
T  43395208 taatttaacttgattttttcccgctcatttgctttattaggtttccaattatttaacctaacaaatt 43395142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 362
Target Start/End: Complemental strand, 13035310 - 13035205
Alignment:
Q  261 cttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaatta----tttaaccaaacaaatt 356  Q
    ||||||||||||||||||  | || |||| ||||||| |||||||||| || |||||| | |||||||   |||||||||    ||||||| ||||||||    
T  13035310 cttatttattaattttgtatggtctgcagcaatttaatctaatttttttccgctcattagttttattaggtttgcaattatttatttaacctaacaaatt 13035211  T
Q  357 tcatct 362  Q
    ||||||    
T  13035210 tcatct 13035205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 362
Target Start/End: Complemental strand, 13105285 - 13105180
Alignment:
Q  261 cttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaatta----tttaaccaaacaaatt 356  Q
    ||||||||||||||||||  | || |||| | |||||||||||||||| || |||||| | |||||||   |||||||||    ||||||| ||||||||    
T  13105285 cttatttattaattttgtatggtctgcagcagtttaacctaatttttttccgctcattagttttattaggtttgcaattatttatttaacctaacaaatt 13105186  T
Q  357 tcatct 362  Q
    ||||||    
T  13105185 tcatct 13105180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 260 - 307
Target Start/End: Complemental strand, 7673147 - 7673100
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttt 307  Q
    |||||||||||||||||||||  || |||| |||||||||||||||||    
T  7673147 ccttatttattaattttgttacgtctgcagcaatttaacctaattttt 7673100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 260 - 311
Target Start/End: Original strand, 22431583 - 22431634
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttccc 311  Q
    |||||||||||||||||||||  || |||| || ||||||||||||||||||    
T  22431583 ccttatttattaattttgttaagtctgcagcaacttaacctaattttttccc 22431634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 328
Target Start/End: Complemental strand, 31486941 - 31486875
Alignment:
Q  262 ttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttatta 328  Q
    ||||||||||||||| |||| || |||  ||||||||||||| |||||||  ||||||||| |||||    
T  31486941 ttatttattaatttttttaggtctgcaacaatttaacctaatattttcccgttcatttgctgtatta 31486875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 309
Target Start/End: Original strand, 38109884 - 38109933
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttc 309  Q
    |||||||||||||||||||||  || |||| ||||||||||| |||||||    
T  38109884 ccttatttattaattttgttacgtctgcagcaatttaacctatttttttc 38109933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 262 - 306
Target Start/End: Original strand, 38268880 - 38268924
Alignment:
Q  262 ttatttattaattttgttagatccgcagtaatttaacctaatttt 306  Q
    |||||||||||||||||||| || |||  ||||||||||||||||    
T  38268880 ttatttattaattttgttaggtctgcaacaatttaacctaatttt 38268924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 262 - 362
Target Start/End: Original strand, 102705 - 102803
Alignment:
Q  262 ttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatc 361  Q
    ||||||||||||||||||||||  ||| |||||  ||||||||||||||| |||||||||||||||||  |||||||||||||||| |||||||| ||||    
T  102705 ttatttattaattttgttagatatgcaataatt--acctaattttttcccgctcatttgctttattaagtttgcaattatttaacctaacaaattccatc 102802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 261 - 362
Target Start/End: Complemental strand, 1641 - 1539
Alignment:
Q  261 cttatttattaattttgttagatccgcagtaatttaacctaa-ttttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    ||||||||||||||||||||  || |||| ||||||| |||| |||||||||||||||||||||||||||  |||||||||||||||| || ||||| ||    
T  1641 cttatttattaattttgttacgtctgcagcaatttaatctaaattttttcccactcatttgctttattaagtttgcaattatttaacctaataaattcca 1542  T
Q  360 tct 362  Q
    |||    
T  1541 tct 1539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 163910 - 163808
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||||||||| || |||| ||||||||||| |||||| || ||||||||||||||||   |||||||||||||||| || ||||| ||    
T  163910 ccttatttattaattttgttaggtctgcagcaatttaacctactttttttccgctcatttgctttattaggtttgcaattatttaacctaataaattcca 163811  T
Q  360 tct 362  Q
    |||    
T  163810 tct 163808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 260 - 354
Target Start/End: Complemental strand, 12493 - 12399
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaa 354  Q
    |||||||||||||||||||||| |  |||| |||||||||||||||||| || |||||||| |||||||   |||||||||||||||| ||||||    
T  12493 ccttatttattaattttgttaggtttgcagcaatttaacctaatttttttccgctcatttgttttattaggtttgcaattatttaacctaacaaa 12399  T

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Target: scaffold0240 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 296 - 362
Target Start/End: Original strand, 13285 - 13351
Alignment:
Q  296 aacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttcatct 362  Q
    |||||||||||||||| ||||||||||||||||  ||||||||||||||||| ||||||||||||||    
T  13285 aacctaattttttccctctcatttgctttattagggttgcaattatttaacctaacaaatttcatct 13351  T

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Target: scaffold0240; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 13090 - 13192
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatttca 359  Q
    |||||||||||||||| ||| | || |||  |||||||||||||||||| || |||||||| |||||||   |||| ||||||||||| |||||||| ||    
T  13090 ccttatttattaatttcgtttggtctgcaacaatttaacctaatttttttccgctcatttggtttattaggtttgccattatttaacctaacaaattcca 13189  T
Q  360 tct 362  Q
    |||    
T  13190 tct 13192  T

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Target: scaffold0320 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 260 - 356
Target Start/End: Complemental strand, 14688 - 14592
Alignment:
Q  260 ccttatttattaattttgttagatccgcagtaatttaacctaattttttcccactcatttgctttattaatgttgcaattatttaaccaaacaaatt 356  Q
    ||||||||||||||||||||| ||  |||  |||||||| |||||| ||| | |||||||| |||||||   |||||||||||||||| ||||||||    
T  14688 ccttatttattaattttgttacatttgcatcaatttaacttaatttattctcgctcatttgttttattagatttgcaattatttaacctaacaaatt 14592  T

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