View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8132_low_17 (Length: 404)

Name: NF8132_low_17
Description: NF8132
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8132_low_17
NF8132_low_17
[»] chr5 (23 HSPs)
chr5 (119-390)||(39777089-39777359)
chr5 (123-299)||(32743840-32744015)
chr5 (24-110)||(19655161-19655247)
chr5 (29-114)||(12913802-12913887)
chr5 (24-96)||(29699384-29699456)
chr5 (24-110)||(291100-291186)
chr5 (24-105)||(16439146-16439227)
chr5 (29-110)||(19598335-19598416)
chr5 (51-110)||(16971220-16971279)
chr5 (24-114)||(3180109-3180198)
chr5 (64-110)||(13312267-13312313)
chr5 (24-85)||(3899867-3899928)
chr5 (24-85)||(16802472-16802533)
chr5 (24-85)||(16971172-16971233)
chr5 (32-85)||(26662427-26662480)
chr5 (32-85)||(26934022-26934075)
chr5 (24-85)||(28818945-28819006)
chr5 (23-120)||(39031199-39031296)
chr5 (51-110)||(2953266-2953325)
chr5 (51-110)||(3899915-3899974)
chr5 (24-61)||(2953242-2953279)
chr5 (64-117)||(12913892-12913945)
chr5 (66-110)||(22083001-22083045)
[»] chr1 (33 HSPs)
chr1 (20-114)||(9157309-9157403)
chr1 (23-120)||(36290455-36290552)
chr1 (24-110)||(32540797-32540883)
chr1 (32-110)||(37155049-37155127)
chr1 (24-110)||(48993966-48994052)
chr1 (29-117)||(44706838-44706926)
chr1 (24-110)||(29179646-29179732)
chr1 (24-110)||(1091593-1091679)
chr1 (24-110)||(17127613-17127699)
chr1 (29-110)||(5995372-5995453)
chr1 (37-110)||(21630045-21630118)
chr1 (24-114)||(4608995-4609085)
chr1 (29-106)||(45728294-45728371)
chr1 (42-122)||(28395628-28395708)
chr1 (24-87)||(46333995-46334058)
chr1 (29-87)||(33219599-33219657)
chr1 (29-85)||(5694943-5694999)
chr1 (51-110)||(48993920-48993979)
chr1 (24-85)||(29371396-29371457)
chr1 (26-110)||(48498418-48498502)
chr1 (51-114)||(17127563-17127626)
chr1 (51-114)||(29371444-29371507)
chr1 (51-110)||(49444916-49444975)
chr1 (24-70)||(741551-741597)
chr1 (51-109)||(29179601-29179659)
chr1 (65-110)||(5995459-5995504)
chr1 (24-85)||(8337900-8337961)
chr1 (24-61)||(15220863-15220900)
chr1 (65-110)||(46932000-46932045)
chr1 (65-110)||(46932072-46932116)
chr1 (24-56)||(1819538-1819570)
chr1 (66-122)||(15220902-15220958)
chr1 (33-85)||(48605005-48605057)
[»] scaffold0586 (1 HSPs)
scaffold0586 (24-114)||(7096-7185)
[»] chr8 (20 HSPs)
chr8 (24-110)||(5033164-5033250)
chr8 (24-110)||(33841640-33841726)
chr8 (24-110)||(35441018-35441104)
chr8 (20-114)||(34229640-34229734)
chr8 (29-110)||(5667100-5667181)
chr8 (29-110)||(8243442-8243523)
chr8 (29-110)||(45191181-45191262)
chr8 (32-114)||(4958599-4958680)
chr8 (51-110)||(5033237-5033296)
chr8 (19-110)||(8796425-8796516)
chr8 (64-110)||(5667186-5667232)
chr8 (40-110)||(43844534-43844604)
chr8 (32-85)||(6296633-6296686)
chr8 (64-109)||(10086846-10086891)
chr8 (20-61)||(34541848-34541889)
chr8 (43-110)||(2581828-2581895)
chr8 (51-110)||(33841594-33841653)
chr8 (51-110)||(35440972-35441031)
chr8 (24-110)||(10086760-10086846)
chr8 (29-85)||(39850983-39851039)
[»] chr3 (18 HSPs)
chr3 (24-114)||(33689175-33689265)
chr3 (29-117)||(43139763-43139851)
chr3 (24-110)||(30734451-30734537)
chr3 (24-114)||(55223231-55223321)
chr3 (51-114)||(30734401-30734464)
chr3 (24-110)||(47492096-47492182)
chr3 (29-110)||(41752967-41753048)
chr3 (29-109)||(50524706-50524786)
chr3 (33-96)||(50549992-50550055)
chr3 (24-110)||(51046122-51046208)
chr3 (24-85)||(30476523-30476584)
chr3 (24-85)||(47677304-47677365)
chr3 (33-85)||(39385746-39385798)
chr3 (24-75)||(29031763-29031814)
chr3 (65-110)||(1801449-1801494)
chr3 (29-85)||(1801500-1801556)
chr3 (33-109)||(30580814-30580890)
chr3 (86-114)||(47677263-47677291)
[»] chr4 (25 HSPs)
chr4 (24-117)||(23444318-23444411)
chr4 (24-110)||(51265448-51265534)
chr4 (24-110)||(6271705-6271791)
chr4 (24-110)||(35682169-35682255)
chr4 (24-120)||(47762601-47762697)
chr4 (23-110)||(30861822-30861909)
chr4 (24-96)||(47661859-47661931)
chr4 (63-110)||(2325068-2325115)
chr4 (24-110)||(26186065-26186149)
chr4 (51-122)||(47661918-47661989)
chr4 (51-111)||(53954686-53954746)
chr4 (51-122)||(23444260-23444331)
chr4 (54-116)||(44380009-44380071)
chr4 (24-85)||(40789207-40789268)
chr4 (51-111)||(35682242-35682302)
chr4 (79-114)||(25617980-25618015)
chr4 (51-110)||(42375086-42375145)
chr4 (48-110)||(3862619-3862681)
chr4 (48-110)||(3871376-3871438)
chr4 (64-110)||(30709989-30710035)
chr4 (24-61)||(42375062-42375099)
chr4 (24-61)||(50384154-50384191)
chr4 (24-85)||(53954638-53954699)
chr4 (85-122)||(54716349-54716386)
chr4 (24-85)||(55090045-55090106)
[»] chr7 (18 HSPs)
chr7 (29-110)||(41018282-41018363)
chr7 (33-110)||(45231908-45231985)
chr7 (24-110)||(11016872-11016958)
chr7 (29-110)||(38975808-38975889)
chr7 (29-116)||(30217508-30217594)
chr7 (29-110)||(34854749-34854830)
chr7 (24-107)||(15027548-15027631)
chr7 (64-110)||(11016958-11017004)
chr7 (29-95)||(22764754-22764820)
chr7 (32-85)||(10419486-10419539)
chr7 (29-85)||(42628323-42628379)
chr7 (51-110)||(42628371-42628430)
chr7 (32-110)||(4290548-4290626)
chr7 (24-110)||(27028842-27028928)
chr7 (65-107)||(48000827-48000869)
chr7 (65-110)||(38975895-38975940)
chr7 (29-85)||(7671965-7672021)
chr7 (29-85)||(29053368-29053424)
[»] chr2 (19 HSPs)
chr2 (29-110)||(29508745-29508826)
chr2 (51-114)||(14470591-14470654)
chr2 (24-110)||(16514427-16514513)
chr2 (32-95)||(8534164-8534227)
chr2 (67-114)||(45213892-45213939)
chr2 (24-94)||(6721970-6722040)
chr2 (24-85)||(38933615-38933676)
chr2 (54-122)||(14892339-14892407)
chr2 (29-114)||(24115919-24116004)
chr2 (24-96)||(15011297-15011369)
chr2 (24-75)||(14229402-14229453)
chr2 (51-110)||(16514500-16514559)
chr2 (67-110)||(29508693-29508736)
chr2 (24-85)||(2828612-2828673)
chr2 (24-85)||(2893991-2894052)
chr2 (65-110)||(6217227-6217272)
chr2 (29-110)||(9173035-9173116)
chr2 (29-85)||(6217278-6217334)
chr2 (29-85)||(29925624-29925680)
[»] scaffold0016 (2 HSPs)
scaffold0016 (51-110)||(49706-49765)
scaffold0016 (24-85)||(49752-49813)
[»] chr6 (9 HSPs)
chr6 (24-110)||(24587464-24587550)
chr6 (33-117)||(551223-551307)
chr6 (24-114)||(17750902-17750991)
chr6 (20-61)||(13043509-13043550)
chr6 (28-85)||(31654333-31654390)
chr6 (29-85)||(24618655-24618711)
chr6 (51-114)||(17750978-17751041)
chr6 (64-110)||(24618604-24618650)
chr6 (24-61)||(12343152-12343189)
[»] scaffold0180 (1 HSPs)
scaffold0180 (51-116)||(19119-19184)
[»] scaffold0161 (1 HSPs)
scaffold0161 (32-110)||(27277-27355)
[»] scaffold1033 (1 HSPs)
scaffold1033 (24-61)||(2265-2302)
[»] scaffold1029 (1 HSPs)
scaffold1029 (24-61)||(2265-2302)
[»] scaffold0047 (1 HSPs)
scaffold0047 (24-85)||(63785-63846)


Alignment Details
Target: chr5 (Bit Score: 248; Significance: 1e-137; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 119 - 390
Target Start/End: Original strand, 39777089 - 39777359
Alignment:
Q  119 tacctactattgtttgtctccttaattcttcatattcaattggctaaacgttacatgaaaaaatcaacctttattccatcagttttcattgccataaata 218  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39777089 tacctaatattgtttgtctccttaattcttcatattcaattggctaaacgttacatgaaaaaatcaacctttattccatcagttttcattgccataaata 39777188  T
Q  219 tcctttatattgctaagaaatcttgcaacggaaagatagggccattcatttactttgtgccactagcatcatatatatactctatattaaagagagaaga 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||    
T  39777189 tcctttatattgctaagaaatcttgcaacggaaagatagggccattcatttagtttgtgccactagcatcatatatatactct-tataaaagagagaaga 39777287  T
Q  319 tggaacatatagaaaagaagctcatcatgctttctattaagctctcatcttttctatcgttcttctaccata 390  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39777288 gggaacatatagaaaagaagctcatcatgctttctattaagctctcatcttttctatcgttcttctaccata 39777359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 123 - 299
Target Start/End: Complemental strand, 32744015 - 32743840
Alignment:
Q  123 tactattgtttgtctccttaattcttcatattcaattggctaaacgttacatgaaaaaatcaacctttattccatcagttttcattgccataaatatcct 222  Q
    |||||||||||| || ||||| ||||||||||||||| ||||||| ||||| |||||||  |||  ||| ||||| ||||||||||||||| |||||  |    
T  32744015 tactattgtttgcctacttaaatcttcatattcaattagctaaacattaca-gaaaaaacaaacgcttaatccattagttttcattgccattaatatttt 32743917  T
Q  223 ttatattgctaagaaatcttgcaacggaaagatagggccattcatttactttgtgccactagcatcatatatatact 299  Q
    |||| |||||||||||| ||||||||||||||||| |||||||||||  |||||||||||  | ||| |||||||||    
T  32743916 ttatgttgctaagaaatgttgcaacggaaagatagagccattcattttgtttgtgccactgacgtcacatatatact 32743840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 24 - 110
Target Start/End: Complemental strand, 19655247 - 19655161
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||| |||||||||||||||||||||||||||  ||||   |||||| ||||| |||||||| |||||||||| |||||||||||||    
T  19655247 tcacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtcaccaatgtcacccaactctatgtcac 19655161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 29 - 114
Target Start/End: Complemental strand, 12913887 - 12913802
Alignment:
Q  29 atgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaa 114  Q
    |||||||||||||||||||| ||||||| ||||  ||||||| ||||| |||||||| |||||||||  |||| ||||||||||||    
T  12913887 atgcttgtgaaagagagagatacacaagaattgtgacattgtgattggccaatgtcaccaatgtcactcaactatatgtcacacaa 12913802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 29699456 - 29699384
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcacc 96  Q
    |||| |||||||||||||||||||||||||||| ||||   |||||| ||||| |||||||| ||||||||||    
T  29699456 tcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcaccaatgtcacc 29699384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 24 - 110
Target Start/End: Complemental strand, 291186 - 291100
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||| ||| |||||||||||| ||||| ||||| ||||   |||||| ||||| |||||||| |||||||||| |||||||||||||    
T  291186 tcacaatgtttgtgaaagagaaagaaatacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctatgtcac 291100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 105
Target Start/End: Complemental strand, 16439227 - 16439146
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctat 105  Q
    |||| |||||||||||||||||||||||||||| ||||  ||||||| ||||  |||||||| |||| | ||| ||||||||    
T  16439227 tcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgattgaccaatgtcaccaatattacccaactctat 16439146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 110
Target Start/End: Complemental strand, 19598416 - 19598335
Alignment:
Q  29 atgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||||||||||||||||||||||||||| ||||    ||||| ||||  |||||||| |||||| ||| |||||||||||||    
T  19598416 atgcttgtgaaagagagagaaacacaagcattgtggtattgtgattgaccaatgtcaccaatgttacccaactctatgtcac 19598335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 110
Target Start/End: Original strand, 16971220 - 16971279
Alignment:
Q  51 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||||| ||||  ||||||| |||||||||||||| |||||||||| |||||||||||||    
T  16971220 cacaagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaactctatgtcac 16971279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 114
Target Start/End: Original strand, 3180109 - 3180198
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaa 114  Q
    |||| ||| |||||||||||||||||||||||| ||||   |||||| ||||  |||||||| |||||| ||| |||||||||| ||||||    
T  3180109 tcacaatgtttgtgaaagagagagaaacacaagcattgtggcattgtgattgaccaatgtcaccaatgttacc-aactctatgtgacacaa 3180198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 110
Target Start/End: Complemental strand, 13312313 - 13312267
Alignment:
Q  64 acattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    ||||||| |||| |||||||||||||||||||| |||||||||||||    
T  13312313 acattgtgattgatcaatgtcatcaatgtcacctaactctatgtcac 13312267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 3899928 - 3899867
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 85  Q
    |||| |||||||||||||||||||||||||||| ||||   |||||| ||||| ||||||||    
T  3899928 tcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtca 3899867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 16802533 - 16802472
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 85  Q
    |||| |||||||| |||||||||||||||||| |||||  ||||||| ||||| ||||||||    
T  16802533 tcacaatgcttgtaaaagagagagaaacacaaatattgttacattgtgattggccaatgtca 16802472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 16971233 - 16971172
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 85  Q
    |||| |||||||||||||||||||||||||||| ||||   |||||| ||||| ||||||||    
T  16971233 tcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtca 16971172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 26662480 - 26662427
Alignment:
Q  32 cttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 85  Q
    ||||||||| ||||||||||||||| | || |||||||| ||||||||||||||    
T  26662480 cttgtgaaaaagagagaaacacaagcaatgtaacattgtgattggtcaatgtca 26662427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 26934075 - 26934022
Alignment:
Q  32 cttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 85  Q
    ||||||||| ||||||||||||||| | || |||||||| ||||||||||||||    
T  26934075 cttgtgaaaaagagagaaacacaagcaatgtaacattgtgattggtcaatgtca 26934022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 28819006 - 28818945
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 85  Q
    |||| |||||||||||||||||||||| ||||||||||  ||||||| ||||  ||||||||    
T  28819006 tcacaatgcttgtgaaagagagagaaatacaagtattgtgacattgtgattgaccaatgtca 28818945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 39031199 - 39031296
Alignment:
Q  23 atcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaaatacta 120  Q
    ||||| |||||||||||||| ||||||| |||| ||||   | ||||| |||| ||| ||||| ||||||||||  |||||||||||  |||||||||    
T  39031199 atcacaatgcttgtgaaagaaagagaaatacaaatattatgatattgtgattgatcagtgtcaccaatgtcaccccactctatgtcatccaaatacta 39031296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 110
Target Start/End: Original strand, 2953266 - 2953325
Alignment:
Q  51 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||||| ||||  ||||||| ||||| |||||||| |||||||||| |||||||||||||    
T  2953266 cacaagcattgtgacattgtgattggccaatgtcaccaatgtcacccaactctatgtcac 2953325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 110
Target Start/End: Original strand, 3899915 - 3899974
Alignment:
Q  51 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||||| ||||  ||||||| |||||||||||||| |||||||||| ||||||| |||||    
T  3899915 cacaagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaactctaagtcac 3899974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 2953279 - 2953242
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattg 61  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  2953279 tcacaatgcttgtgaaagagagagaaacacaagcattg 2953242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 117
Target Start/End: Original strand, 12913892 - 12913945
Alignment:
Q  64 acattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaaata 117  Q
    ||||||| ||||  |||| ||| |||||||||| ||||||||||||||||||||    
T  12913892 acattgtgattgaccaatatcaccaatgtcacccaactctatgtcacacaaata 12913945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 110
Target Start/End: Complemental strand, 22083045 - 22083001
Alignment:
Q  66 attgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    ||||| ||||||||||||||| ||||||||  |||||||||||||    
T  22083045 attgtgattggtcaatgtcattaatgtcacacaactctatgtcac 22083001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 7e-25; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 20 - 114
Target Start/End: Complemental strand, 9157403 - 9157309
Alignment:
Q  20 aatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaa 114  Q
    |||||||| ||||||| |||||||||||||||||||| ||||  ||||||| |||||||||||| | |||||||||| |||||||||||||||||    
T  9157403 aatatcacaatgcttgagaaagagagagaaacacaagcattgtgacattgtgattggtcaatgttaccaatgtcacccaactctatgtcacacaa 9157309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 36290455 - 36290552
Alignment:
Q  23 atcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaaatacta 120  Q
    ||||| ||||||||||||||||||||||||||| |||||  ||||||| ||||||||||| || |||||||||| ||||||||||||| ||| |||||    
T  36290455 atcacaatgcttgtgaaagagagagaaacacaaatattgtgacattgtgattggtcaatgccaccaatgtcacccaactctatgtcacccaagtacta 36290552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 24 - 110
Target Start/End: Original strand, 32540797 - 32540883
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||| |||||||||||||||||||||||||||| |||| |||||||| |||||||||||||| |||||||| | || ||||||||||    
T  32540797 tcacaatgcttgtgaaagagagagaaacacaagcattgtaacattgtgattggtcaatgtcaccaatgtcatccaattctatgtcac 32540883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 32 - 110
Target Start/End: Complemental strand, 37155127 - 37155049
Alignment:
Q  32 cttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    ||||||||||||||||||||||||| ||||  ||||||| ||||| |||||||| ||||||||||||||||||||||||    
T  37155127 cttgtgaaagagagagaaacacaagcattgtgacattgtgattggccaatgtcaccaatgtcaccaaactctatgtcac 37155049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 24 - 110
Target Start/End: Original strand, 48993966 - 48994052
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||| |||||||||||||||||||||||||||| ||||   |||||| |||||||||||||| |||||||||| |||||||||||||    
T  48993966 tcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcaccaatgtcacccaactctatgtcac 48994052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 117
Target Start/End: Original strand, 44706838 - 44706926
Alignment:
Q  29 atgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaaata 117  Q
    |||||||||||||||||||||||||||| ||||   |||||| ||||| |||||||| |||||||||| ||||||||||||| ||||||    
T  44706838 atgcttgtgaaagagagagaaacacaagcattgcggcattgtgattggccaatgtcaccaatgtcacccaactctatgtcacccaaata 44706926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 24 - 110
Target Start/End: Original strand, 29179646 - 29179732
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||| |||||||||||||||||||||||||||| ||||   |||||| ||||| |||||||| |||||||||| |||||||||||||    
T  29179646 tcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctatgtcac 29179732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 24 - 110
Target Start/End: Original strand, 1091593 - 1091679
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||| |||||||||||||||||||||||||||  ||||  ||||||| ||||||||| |||| |||| ||||| |||||||||||||    
T  1091593 tcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattggtcaaagtcaccaatatcacccaactctatgtcac 1091679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 24 - 110
Target Start/End: Original strand, 17127613 - 17127699
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||| |||||||||||||||||||||||||||| ||||  ||||| | ||||||||||||||  ||||||||| |||||||| ||||    
T  17127613 tcacaatgcttgtgaaagagagagaaacacaagcattgtgacattttgattggtcaatgtcactaatgtcacctaactctatatcac 17127699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 29 - 110
Target Start/End: Complemental strand, 5995453 - 5995372
Alignment:
Q  29 atgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||||||||||||||||||||||||||| ||||   |||||| ||||| |||||| | |||||||| |||||||||||||||    
T  5995453 atgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgttaccaatgtcatcaaactctatgtcac 5995372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 37 - 110
Target Start/End: Complemental strand, 21630118 - 21630045
Alignment:
Q  37 gaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||||||||||||||||||| ||||  ||||||| |||||||||||||| |||||||||| |||| ||||||||    
T  21630118 gaaagagagagaaacacaagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaactttatgtcac 21630045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 114
Target Start/End: Complemental strand, 4609085 - 4608995
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaa 114  Q
    |||| |||||||||||||||||||||||||||  ||||  ||||||| || ||||||||||| | |||||||| ||||| || ||||||||    
T  4609085 tcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgatgggtcaatgtcaccgatgtcacccaactccatatcacacaa 4608995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 106
Target Start/End: Complemental strand, 45728371 - 45728294
Alignment:
Q  29 atgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatg 106  Q
    |||||||||||||||||||||||||||| ||||  | ||||| |||||||||| ||| |||| ||||| |||||||||    
T  45728371 atgcttgtgaaagagagagaaacacaagcattgtgatattgtgattggtcaatatcaccaatatcacccaactctatg 45728294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 42 - 122
Target Start/End: Complemental strand, 28395708 - 28395628
Alignment:
Q  42 agagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaaatactacc 122  Q
    ||||||||||||||| ||||  ||||||| |||||||||||||| |||||||||  |||||||||| || ||||| |||||    
T  28395708 agagagaaacacaagcattgtgacattgtgattggtcaatgtcaccaatgtcactcaactctatgttacccaaatgctacc 28395628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 46333995 - 46334058
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatc 87  Q
    |||| |||||||||||||||||| ||||||||| ||||  ||||||| ||||||||||||||||    
T  46333995 tcacaatgcttgtgaaagagagaaaaacacaagcattgtgacattgtgattggtcaatgtcatc 46334058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 33219657 - 33219599
Alignment:
Q  29 atgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatc 87  Q
    |||||||||||||||||| ||||||||| |||| |||||||| |||| |||||||||||    
T  33219657 atgcttgtgaaagagagaaaaacacaagcattgtaacattgtgattgatcaatgtcatc 33219599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 5694943 - 5694999
Alignment:
Q  29 atgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 85  Q
    ||||||||||||||||||||||||||| |||||  ||||||||||||  ||||||||    
T  5694943 atgcttgtgaaagagagagaaacacaaatattgtgacattgtaattgaccaatgtca 5694999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 110
Target Start/End: Complemental strand, 48993979 - 48993920
Alignment:
Q  51 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||||| ||||  ||||||| |||||||||||||| |||||||||| |||||||||||||    
T  48993979 cacaagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaactctatgtcac 48993920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 29371457 - 29371396
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 85  Q
    |||| |||||||||||||||||||||||||||  ||||  ||||||| ||||| ||||||||    
T  29371457 tcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattggccaatgtca 29371396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 110
Target Start/End: Complemental strand, 48498502 - 48498418
Alignment:
Q  26 accatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    ||||||||||||||||||||||||||||||  ||||    ||| | ||||  ||||||||  ||||||||| |||||||||||||    
T  48498502 accatgcttgtgaaagagagagaaacacaaacattgtggtattatgattgaccaatgtcacaaatgtcacccaactctatgtcac 48498418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 114
Target Start/End: Complemental strand, 17127626 - 17127563
Alignment:
Q  51 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaa 114  Q
    |||||| ||||  ||||||| ||||||||||||||  ||||||||| |||||||| ||||||||    
T  17127626 cacaagcattgtgacattgtgattggtcaatgtcactaatgtcacctaactctatatcacacaa 17127563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 114
Target Start/End: Original strand, 29371444 - 29371507
Alignment:
Q  51 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaa 114  Q
    |||||| ||||  ||||||| |||||||||| ||| |||||||||| | |||||||||||||||    
T  29371444 cacaagcattgtgacattgtgattggtcaatatcaccaatgtcacctagctctatgtcacacaa 29371507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 110
Target Start/End: Complemental strand, 49444975 - 49444916
Alignment:
Q  51 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||||| |||| |||||||| |||| || |||||| |||||||||| |||||||||||||    
T  49444975 cacaagcattgtaacattgtgattgatcgatgtcaccaatgtcacccaactctatgtcac 49444916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 741551 - 741597
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgt 70  Q
    |||| |||||||||||||||||||||||||||| ||||  |||||||    
T  741551 tcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgt 741597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 109
Target Start/End: Complemental strand, 29179659 - 29179601
Alignment:
Q  51 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtca 109  Q
    |||||| ||||  ||||||| |||||||| ||||| |||||||||| ||||||||||||    
T  29179659 cacaagcattgtgacattgtgattggtcagtgtcaccaatgtcacccaactctatgtca 29179601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 110
Target Start/End: Original strand, 5995459 - 5995504
Alignment:
Q  65 cattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||||| |||||||||||||| |||||||| | |||||||||||||    
T  5995459 cattgtgattggtcaatgtcaccaatgtcatccaactctatgtcac 5995504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 8337900 - 8337961
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 85  Q
    |||| ||| |||||||||||||||||||||||  ||||   |||||| ||||||||||||||    
T  8337900 tcacaatgtttgtgaaagagagagaaacacaaacattgtggcattgtgattggtcaatgtca 8337961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 15220900 - 15220863
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattg 61  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  15220900 tcacaatgcttgtgaaagagagagaaacacaagcattg 15220863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 110
Target Start/End: Complemental strand, 46932045 - 46932000
Alignment:
Q  65 cattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||||| ||||| |||||||| |||||||||| |||||||||||||    
T  46932045 cattgtgattggccaatgtcaccaatgtcacccaactctatgtcac 46932000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 110
Target Start/End: Original strand, 46932072 - 46932116
Alignment:
Q  65 cattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||||| |||||||||||||| |||||||||| |||||||||||||    
T  46932072 cattgtgattggtcaatgtcaccaatgtcacc-aactctatgtcac 46932116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 56
Target Start/End: Original strand, 1819538 - 1819570
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaag 56  Q
    |||| ||||||||||||||||||||||||||||    
T  1819538 tcacaatgcttgtgaaagagagagaaacacaag 1819570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 122
Target Start/End: Original strand, 15220902 - 15220958
Alignment:
Q  66 attgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaaatactacc 122  Q
    ||||| ||||| |||| ||| |||||||||| ||||||||||||| ||||| |||||    
T  15220902 attgtgattggccaatatcaccaatgtcacccaactctatgtcacccaaatgctacc 15220958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 48605005 - 48605057
Alignment:
Q  33 ttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 85  Q
    ||||||||||||||||||| |||| ||||  ||||| ||||||| ||||||||    
T  48605005 ttgtgaaagagagagaaacgcaagcattgtgacattataattggccaatgtca 48605057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 24 - 114
Target Start/End: Original strand, 7096 - 7185
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaa 114  Q
    |||| |||||||||||||||||||||||||||| ||||  ||||||| ||||| |||||||| |||||||||| |||||||||||||||||    
T  7096 tcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgattggccaatgtcaccaatgtcacc-aactctatgtcacacaa 7185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 2e-22; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 24 - 110
Target Start/End: Complemental strand, 5033250 - 5033164
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||| |||||||||||||||||||||||||||| ||||   |||||| |||||||||||||| |||||||||| |||||||||||||    
T  5033250 tcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtcaccaatgtcacccaactctatgtcac 5033164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 24 - 110
Target Start/End: Original strand, 33841640 - 33841726
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||| |||||||||||||||||||||||||||| ||||   |||| | |||||||||||||| |||||||||| |||||||||||||    
T  33841640 tcacaatgcttgtgaaagagagagaaacacaagcattgtggcattctgattggtcaatgtcaccaatgtcacccaactctatgtcac 33841726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 24 - 110
Target Start/End: Original strand, 35441018 - 35441104
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||| |||||||||||||||||||||||||||| ||||   |||||| ||||| |||||||| |||||||||| |||||||||||||    
T  35441018 tcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctatgtcac 35441104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 114
Target Start/End: Complemental strand, 34229734 - 34229640
Alignment:
Q  20 aatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaa 114  Q
    |||||||| |||||||||||||||||||||||||||| |||   ||||||| ||||    ||||||  ||||||||| |||||||||||||||||    
T  34229734 aatatcacaatgcttgtgaaagagagagaaacacaagcattctgacattgtgattgactcatgtcactaatgtcacccaactctatgtcacacaa 34229640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 110
Target Start/End: Complemental strand, 5667181 - 5667100
Alignment:
Q  29 atgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||||||||||||||||||||| ||||| ||||  ||||||| ||||  |||||||| |||||||| | |||||||||||||    
T  5667181 atgcttgtgaaagagagagaaatacaagcattgtgacattgtgattgaccaatgtcaccaatgtcatccaactctatgtcac 5667100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 110
Target Start/End: Original strand, 8243442 - 8243523
Alignment:
Q  29 atgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||||||||||||||||||||||||||| ||||   |||||| ||||  ||| |||| |||||||||| |||||||||||||    
T  8243442 atgcttgtgaaagagagagaaacacaagcattgtggcattgtgattgaccaacgtcaccaatgtcacccaactctatgtcac 8243523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 110
Target Start/End: Original strand, 45191181 - 45191262
Alignment:
Q  29 atgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||||| ||||||||||||||||||||  |||| |||||| | |||||||||||||| |||| ||| | |||||||||||||    
T  45191181 atgcttatgaaagagagagaaacacaaacattgtaacattttgattggtcaatgtcaccaatatcatccaactctatgtcac 45191262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 4958680 - 4958599
Alignment:
Q  32 cttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaa 114  Q
    ||||||||||||||||||||||||  |||   ||||||| ||||| ||||||||||||| ||| |||| ||||||||||||||    
T  4958680 cttgtgaaagagagagaaacacaaacattatgacattgtgattggccaatgtcatcaatatca-caaattctatgtcacacaa 4958599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 110
Target Start/End: Original strand, 5033237 - 5033296
Alignment:
Q  51 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||||| ||||  ||||||| |||||||||||||| |||||||||| |||||||||||||    
T  5033237 cacaagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaactctatgtcac 5033296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 110
Target Start/End: Complemental strand, 8796516 - 8796425
Alignment:
Q  19 aaatatcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||| |||| |||||||||||||| ||||||||||||| ||||  ||||||| ||||  |||| |||  ||| ||||| |||||||||||||    
T  8796516 aaatgtcacaatgcttgtgaaagatagagaaacacaagcattgtgacattgtgattgaccaatatcacaaatatcacctaactctatgtcac 8796425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 110
Target Start/End: Original strand, 5667186 - 5667232
Alignment:
Q  64 acattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||    
T  5667186 acattgtaattggccaatgtcaccaatgtcatcaaactctatgtcac 5667232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 110
Target Start/End: Original strand, 43844534 - 43844604
Alignment:
Q  40 agagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    ||||||||||||||||| ||||  ||||||| |||| ||||| ||| |||||||| | |||||||||||||    
T  43844534 agagagagaaacacaagcattgtgacattgtgattgatcaatatcaccaatgtcatccaactctatgtcac 43844604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 6296686 - 6296633
Alignment:
Q  32 cttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 85  Q
    ||||||||||||||||||||||||| |||   ||||||| ||||||||||||||    
T  6296686 cttgtgaaagagagagaaacacaagcattatgacattgtgattggtcaatgtca 6296633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 64 - 109
Target Start/End: Original strand, 10086846 - 10086891
Alignment:
Q  64 acattgtaattggtcaatgtcatcaatgtcaccaaactctatgtca 109  Q
    ||||||| |||||||||||||| |||||||||| ||||||||||||    
T  10086846 acattgtgattggtcaatgtcaccaatgtcacccaactctatgtca 10086891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 34541848 - 34541889
Alignment:
Q  20 aatatcaccatgcttgtgaaagagagagaaacacaagtattg 61  Q
    |||||||| |||||||||||||||||||||||||||| ||||    
T  34541848 aatatcacaatgcttgtgaaagagagagaaacacaagcattg 34541889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 43 - 110
Target Start/End: Complemental strand, 2581895 - 2581828
Alignment:
Q  43 gagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||||||||||||| ||||   |||||| ||||| |||||||| |||||||||| || ||||||||||    
T  2581895 gagagaaacacaagcattgtggcattgtgattggccaatgtcaacaatgtcacccaattctatgtcac 2581828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 110
Target Start/End: Complemental strand, 33841653 - 33841594
Alignment:
Q  51 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||||| ||||  ||| ||| |||||||||||||| |||||||||| |||||||||||||    
T  33841653 cacaagcattgtgacaatgtgattggtcaatgtcaccaatgtcacccaactctatgtcac 33841594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 110
Target Start/End: Complemental strand, 35441031 - 35440972
Alignment:
Q  51 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||||| ||||  ||||||| |||||||||||||| |||||||||| ||||||| |||||    
T  35441031 cacaagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaactctaagtcac 35440972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 110
Target Start/End: Complemental strand, 10086846 - 10086760
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||| ||| |||||||||||||||||||||||  |||   ||||||| ||||  ||||||||  ||||||||| || ||||||||||    
T  10086846 tcacaatgtttgtgaaagagagagaaacacaaacattatgacattgtgattgaccaatgtcactaatgtcacccaattctatgtcac 10086760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 39851039 - 39850983
Alignment:
Q  29 atgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 85  Q
    |||||||||||||||||||||||||||  ||||   |||||| ||||| ||||||||    
T  39851039 atgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtca 39850983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 2e-22; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 24 - 114
Target Start/End: Complemental strand, 33689265 - 33689175
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaa 114  Q
    |||| |||||||||||||||||||||||||||| ||||  ||||||| ||||  |||| |||||||||||||| |||||||||||||||||    
T  33689265 tcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgattgaccaatatcatcaatgtcacccaactctatgtcacacaa 33689175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 117
Target Start/End: Original strand, 43139763 - 43139851
Alignment:
Q  29 atgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaaata 117  Q
    |||||||||||||||||||||||||||| ||||   |||||| ||||| |||||||| |||||||||| ||||||||||||| ||||||    
T  43139763 atgcttgtgaaagagagagaaacacaagcattgtggcattgttattggccaatgtcaccaatgtcacccaactctatgtcacccaaata 43139851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 24 - 110
Target Start/End: Original strand, 30734451 - 30734537
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||| |||||||||||||| |||||||||||||||||   ||||||| ||||| |||||||| |||||||||| |||||||||||||    
T  30734451 tcacaatgcttgtgaaagatagagaaacacaagtattatgacattgtgattggccaatgtcaccaatgtcacctaactctatgtcac 30734537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 24 - 114
Target Start/End: Complemental strand, 55223321 - 55223231
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaa 114  Q
    |||| |||||||||||||||||||||||| |||||||  || ||||| ||||  |||| ||| |||||||||| |||||||||||||||||    
T  55223321 tcacaatgcttgtgaaagagagagaaacataagtattctaatattgtgattgaccaatatcaccaatgtcacctaactctatgtcacacaa 55223231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 51 - 114
Target Start/End: Complemental strand, 30734464 - 30734401
Alignment:
Q  51 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaa 114  Q
    |||||| ||||  ||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  30734464 cacaagcattgtgacattgtgatcggtcaatgtcatcaatgtcaccaaactctatgtcacacaa 30734401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 110
Target Start/End: Original strand, 47492096 - 47492182
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||| |||||||||||| ||||||||||||||| ||||  ||||||| ||||| |||| | | |||||||||| |||||||||||||    
T  47492096 tcacaatgcttgtgaaaaagagagaaacacaagcattgtgacattgtgattggccaatatgaccaatgtcacccaactctatgtcac 47492182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 110
Target Start/End: Complemental strand, 41753048 - 41752967
Alignment:
Q  29 atgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||||||||||||||| ||||||||||  ||||   |||||| ||||| |||||||| |||||||||| |||||||||||||    
T  41753048 atgcttgtgaaagagaaagaaacacaaacattgtggcattgtgattggccaatgtcaccaatgtcacccaactctatgtcac 41752967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 50524786 - 50524706
Alignment:
Q  29 atgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtca 109  Q
    |||||||||||||||||||||||||||  ||||  ||||| | ||||||||||||||||| | ||||  ||||||||||||    
T  50524786 atgcttgtgaaagagagagaaacacaaacattgtgacattatgattggtcaatgtcatcattatcactcaactctatgtca 50524706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 33 - 96
Target Start/End: Complemental strand, 50550055 - 50549992
Alignment:
Q  33 ttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcacc 96  Q
    |||||||||||||||||||||||| |||| || ||||| |||||||||||||| |||| |||||    
T  50550055 ttgtgaaagagagagaaacacaagcattgtaatattgtgattggtcaatgtcaccaatatcacc 50549992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 24 - 110
Target Start/End: Original strand, 51046122 - 51046208
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||| ||| |||||||||||||||||||||||| |||    |||||| ||||| |||||||| |||||||| | |||||||||||||    
T  51046122 tcacaatgtttgtgaaagagagagaaacacaagcattatggcattgtgattggccaatgtcaccaatgtcatccaactctatgtcac 51046208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 30476523 - 30476584
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 85  Q
    |||| |||||||||||||||||||||||||||| ||||  ||||||| ||||  ||||||||    
T  30476523 tcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgattgaccaatgtca 30476584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 47677304 - 47677365
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 85  Q
    |||| |||||||||||||||||||||||||||  ||||  ||||||| |||| |||||||||    
T  47677304 tcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattgatcaatgtca 47677365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 39385746 - 39385798
Alignment:
Q  33 ttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 85  Q
    |||||||||||||||||| |||| ||||| |||||||| ||||| ||||||||    
T  39385746 ttgtgaaagagagagaaatacaaatattgtaacattgtgattggccaatgtca 39385798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 29031763 - 29031814
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattg 75  Q
    |||| |||||||||||||||||||||||||||  ||||  ||||||||||||    
T  29031763 tcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtaattg 29031814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 110
Target Start/End: Complemental strand, 1801494 - 1801449
Alignment:
Q  65 cattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||||| ||||| |||||||| |||||||||| |||||||||||||    
T  1801494 cattgtgattggccaatgtcaccaatgtcacccaactctatgtcac 1801449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 1801500 - 1801556
Alignment:
Q  29 atgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 85  Q
    |||||||||||||||||||||||||||  ||||   |||||| ||||| ||||||||    
T  1801500 atgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtca 1801556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 33 - 109
Target Start/End: Original strand, 30580814 - 30580890
Alignment:
Q  33 ttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtca 109  Q
    |||||||||||| ||||||||||| | ||  ||||||| ||||  ||||||||  ||||||||| || |||||||||    
T  30580814 ttgtgaaagagatagaaacacaagcactgtgacattgtgattgaccaatgtcacaaatgtcacccaattctatgtca 30580890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 86 - 114
Target Start/End: Complemental strand, 47677291 - 47677263
Alignment:
Q  86 tcaatgtcaccaaactctatgtcacacaa 114  Q
    |||||||||||||||||||||||||||||    
T  47677291 tcaatgtcaccaaactctatgtcacacaa 47677263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 7e-22; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 23444318 - 23444411
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaaata 117  Q
    |||| |||||||||||||||||||||||||||| ||||   |||||| ||||| |||||||| |||||||||| ||||||||||||| ||||||    
T  23444318 tcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctatgtcacccaaata 23444411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 24 - 110
Target Start/End: Complemental strand, 51265534 - 51265448
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||| |||||||||||||||||||||||||||| ||||   |||||| ||||| |||||||| |||||||||| |||||||||||||    
T  51265534 tcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctatgtcac 51265448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 24 - 110
Target Start/End: Complemental strand, 6271791 - 6271705
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||| |||||||||||||||||||||||||||| ||||   |||||| ||||| |||||||| |||| ||||| |||||||||||||    
T  6271791 tcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcaccaatatcacccaactctatgtcac 6271705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 24 - 110
Target Start/End: Complemental strand, 35682255 - 35682169
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||| |||||||||||||| |||||||||||||||||   ||||||| ||||| |||||||| |||| ||||| |||||||||||||    
T  35682255 tcacaatgcttgtgaaagatagagaaacacaagtattatgacattgtgattggccaatgtcaccaatatcacctaactctatgtcac 35682169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 120
Target Start/End: Complemental strand, 47762697 - 47762601
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaaatacta 120  Q
    |||| |||||||||||||||||||||||| ||  |||| |||||||| ||||||||||||||  ||| ||||  | ||||||||||| |||||||||    
T  47762697 tcacaatgcttgtgaaagagagagaaacataaacattgtaacattgtgattggtcaatgtcacaaatatcactcagctctatgtcacccaaatacta 47762601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 30861822 - 30861909
Alignment:
Q  23 atcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    ||||| |||||||||||||||||||||||||||| ||||   |||||| ||||| |||||||| |||| ||| | |||||||||||||    
T  30861822 atcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcaccaatatcatccaactctatgtcac 30861909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 47661931 - 47661859
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcacc 96  Q
    |||| |||||||||||||||||||||||||||| ||||   |||||| ||||| |||||||| ||||||||||    
T  47661931 tcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcaccaatgtcacc 47661859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 63 - 110
Target Start/End: Original strand, 2325068 - 2325115
Alignment:
Q  63 aacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||    
T  2325068 aacattgtgatttgtcaatgtcatcaatgtcaccaaactctatgtcac 2325115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 110
Target Start/End: Original strand, 26186065 - 26186149
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||| |||||||||||||||  ||||||||||| ||||  | ||||| ||||| ||||||||||||||| ||| |||||||||||||    
T  26186065 tcacaatgcttgtgaaagag--agaaacacaagcattgtgaaattgtgattggccaatgtcatcaatgttacccaactctatgtcac 26186149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 51 - 122
Target Start/End: Original strand, 47661918 - 47661989
Alignment:
Q  51 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaaatactacc 122  Q
    |||||| ||||  ||||||| |||||||||||||| |||||||||| ||||||||||||| ||||| |||||    
T  47661918 cacaagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaactctatgtcacccaaatgctacc 47661989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 53954686 - 53954746
Alignment:
Q  51 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcaca 111  Q
    |||||| ||||  ||||||||||||| |||||||| |||||||||| ||||||||||||||    
T  53954686 cacaagcattgtgacattgtaattggacaatgtcaccaatgtcacccaactctatgtcaca 53954746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 23444331 - 23444260
Alignment:
Q  51 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaaatactacc 122  Q
    |||||| ||||  ||||||| |||||||||||||| |||||||||| |||||||||| || ||||| |||||    
T  23444331 cacaagcattgtgacattgtgattggtcaatgtcaccaatgtcacccaactctatgttacccaaatgctacc 23444260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 44380009 - 44380071
Alignment:
Q  54 aagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaaat 116  Q
    |||||||| |||||||| |||||||||| ||| |||||||||  ||||||||||||| |||||    
T  44380009 aagtattgtaacattgtgattggtcaatatcaccaatgtcactcaactctatgtcacccaaat 44380071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 40789268 - 40789207
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 85  Q
    |||| |||||||||||||||||||||||||||  ||||  ||||||| ||||| ||||||||    
T  40789268 tcacaatgcttgtgaaagagagagaaacacaaacattgtgacattgtgattggccaatgtca 40789207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 35682242 - 35682302
Alignment:
Q  51 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcaca 111  Q
    |||||| ||||  ||||||| || ||||||||||| |||||||||| ||||||||||||||    
T  35682242 cacaagcattgtgacattgtgatcggtcaatgtcaccaatgtcacctaactctatgtcaca 35682302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 79 - 114
Target Start/End: Complemental strand, 25618015 - 25617980
Alignment:
Q  79 aatgtcatcaatgtcaccaaactctatgtcacacaa 114  Q
    |||||||||||||||||| |||||||||||||||||    
T  25618015 aatgtcatcaatgtcacccaactctatgtcacacaa 25617980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 110
Target Start/End: Original strand, 42375086 - 42375145
Alignment:
Q  51 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||||| ||||  ||||||| |||| ||||||||| |||||||||| |||||||||||||    
T  42375086 cacaagcattgtgacattgtgattgatcaatgtcaccaatgtcacccaactctatgtcac 42375145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 110
Target Start/End: Original strand, 3862619 - 3862681
Alignment:
Q  48 aaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    ||||||||| ||||   |||||| ||||| |||||||| |||||||||| |||||||||||||    
T  3862619 aaacacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctatgtcac 3862681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 110
Target Start/End: Original strand, 3871376 - 3871438
Alignment:
Q  48 aaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    ||||||||| ||||   |||||| ||||| |||||||| |||||||||| |||||||||||||    
T  3871376 aaacacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctatgtcac 3871438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 110
Target Start/End: Original strand, 30709989 - 30710035
Alignment:
Q  64 acattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    ||||||| ||||| |||||||| |||||||||| |||||||||||||    
T  30709989 acattgtgattggccaatgtcaccaatgtcacctaactctatgtcac 30710035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 42375099 - 42375062
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattg 61  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  42375099 tcacaatgcttgtgaaagagagagaaacacaagcattg 42375062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 50384154 - 50384191
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattg 61  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  50384154 tcacaatgcttgtgaaagagagagaaacacaagcattg 50384191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 53954699 - 53954638
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 85  Q
    |||| ||||||||||||||| ||||||||| || ||||  ||||||| ||||| ||||||||    
T  53954699 tcacaatgcttgtgaaagagtgagaaacactagcattgtgacattgtgattggccaatgtca 53954638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 54716386 - 54716349
Alignment:
Q  85 atcaatgtcaccaaactctatgtcacacaaatactacc 122  Q
    |||||||||||| ||||||||||||| |||||||||||    
T  54716386 atcaatgtcacccaactctatgtcactcaaatactacc 54716349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 55090045 - 55090106
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 85  Q
    |||| |||||||||||||||||||| ||||||| ||||  ||||||| ||||  ||||||||    
T  55090045 tcacaatgcttgtgaaagagagagagacacaagcattgtgacattgtgattgaccaatgtca 55090106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 2e-19; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 29 - 110
Target Start/End: Original strand, 41018282 - 41018363
Alignment:
Q  29 atgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||||||||||||||||||||||| ||| ||||   |||||| |||||||||||||| |||||||||| |||||||||||||    
T  41018282 atgcttgtgaaagagagagaaacataagcattgtggcattgtgattggtcaatgtcaccaatgtcacccaactctatgtcac 41018363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 33 - 110
Target Start/End: Original strand, 45231908 - 45231985
Alignment:
Q  33 ttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||||||||||||||||||| ||| |||| |||||||| ||||| |||||||| |||||||||| |||||||||||||    
T  45231908 ttgtgaaagagagagaaacaaaagcattgtaacattgtgattggccaatgtcaccaatgtcacccaactctatgtcac 45231985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 24 - 110
Target Start/End: Complemental strand, 11016958 - 11016872
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||| ||| |||||||||||||||||||||||| ||||   |||||| ||||| |||||||| |||||||||| |||||||||||||    
T  11016958 tcacaatgtttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcaccaatgtcacccaactctatgtcac 11016872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 110
Target Start/End: Complemental strand, 38975889 - 38975808
Alignment:
Q  29 atgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||||||||||||||||||||||||||| ||||   |||||| ||||  |||||| | |||||||||| |||||||||||||    
T  38975889 atgcttgtgaaagagagagaaacacaagcattgtggcattgtgattgaccaatgttaccaatgtcacccaactctatgtcac 38975808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 116
Target Start/End: Original strand, 30217508 - 30217594
Alignment:
Q  29 atgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaaat 116  Q
    |||||||||||||||||||||||| ||  |||   | ||||| |||||  |||||||||||||||| |||||||||||||||||||||    
T  30217508 atgcttgtgaaagagagagaaacataaacattttgatattgtgattggcgaatgtcatcaatgtca-caaactctatgtcacacaaat 30217594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 110
Target Start/End: Original strand, 34854749 - 34854830
Alignment:
Q  29 atgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||||||||||||||| ||||||||||  ||||   |||||| ||||  |||||||| |||||||||| |||||||||||||    
T  34854749 atgcttgtgaaagagatagaaacacaaacattgtggcattgtgattgaccaatgtcaccaatgtcacccaactctatgtcac 34854830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 15027631 - 15027548
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgt 107  Q
    |||| |||||||||||||||||||||||||||  ||||    ||||| |||||||||||||| ||||||||   ||||||||||    
T  15027631 tcacaatgcttgtgaaagagagagaaacacaaacattgtggtattgtgattggtcaatgtcaccaatgtcaaacaactctatgt 15027548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 110
Target Start/End: Original strand, 11016958 - 11017004
Alignment:
Q  64 acattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    ||||||| |||||||||||||| |||||||||| |||||||||||||    
T  11016958 acattgtgattggtcaatgtcaccaatgtcacccaactctatgtcac 11017004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 22764754 - 22764820
Alignment:
Q  29 atgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcac 95  Q
    |||||||||||||||||||||||||||  ||||  ||||||| ||||| |||| ||| |||||||||    
T  22764754 atgcttgtgaaagagagagaaacacaaacattgtgacattgtgattggccaatatcaccaatgtcac 22764820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 10419539 - 10419486
Alignment:
Q  32 cttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 85  Q
    |||||||||||||||||||||||||||||| |||||| | ||||  ||||||||    
T  10419539 cttgtgaaagagagagaaacacaagtattgtaacattatgattgaccaatgtca 10419486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 42628379 - 42628323
Alignment:
Q  29 atgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 85  Q
    |||||||||||||||||||||||| ||| ||||   |||||| ||||||||||||||    
T  42628379 atgcttgtgaaagagagagaaacataagcattgtggcattgtgattggtcaatgtca 42628323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 110
Target Start/End: Original strand, 42628371 - 42628430
Alignment:
Q  51 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||||| ||||| ||||||| ||||| |||| ||| |||||||||| |||||||||||||    
T  42628371 cacaagcattgggacattgtgattggccaatatcaccaatgtcacccaactctatgtcac 42628430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 110
Target Start/End: Complemental strand, 4290626 - 4290548
Alignment:
Q  32 cttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||||||||||||||||||||| || ||||   |||||| ||||  |||| ||| |||| ||||| |||||||||||||    
T  4290626 cttgtgaaagagagagaaacacgagcattgtggcattgtgattgaccaatatcaccaatatcacccaactctatgtcac 4290548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 110
Target Start/End: Original strand, 27028842 - 27028928
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||| |||||| ||||||||||||||||||||  ||||  ||||||| ||||  |||||||| |||  ||||| || ||||||||||    
T  27028842 tcacaatgcttctgaaagagagagaaacacaaacattgtgacattgtgattgaccaatgtcaccaacatcacccaagtctatgtcac 27028928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 107
Target Start/End: Original strand, 48000827 - 48000869
Alignment:
Q  65 cattgtaattggtcaatgtcatcaatgtcaccaaactctatgt 107  Q
    |||||| |||||||||||||| |||||||||| ||||||||||    
T  48000827 cattgtgattggtcaatgtcaccaatgtcacccaactctatgt 48000869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 110
Target Start/End: Original strand, 38975895 - 38975940
Alignment:
Q  65 cattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||| |||||| ||||||||| |||||||||| |||||||||||||    
T  38975895 cattataattgatcaatgtcaccaatgtcacctaactctatgtcac 38975940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 7671965 - 7672021
Alignment:
Q  29 atgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 85  Q
    |||||||||||||||||||||||||||  ||||   |||||| ||||| ||||||||    
T  7671965 atgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtca 7672021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 29053368 - 29053424
Alignment:
Q  29 atgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 85  Q
    |||||||||||||||||||||||||||  ||||   |||||| ||||| ||||||||    
T  29053368 atgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtca 29053424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 4e-17; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 29 - 110
Target Start/End: Original strand, 29508745 - 29508826
Alignment:
Q  29 atgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||||||||||||||||||||||||||| ||||   |||||| ||||| |||||||| |||| ||||| |||||||||||||    
T  29508745 atgcttgtgaaagagagagaaacacaagcattgcggcattgtgattggccaatgtcaccaatatcacccaactctatgtcac 29508826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 51 - 114
Target Start/End: Complemental strand, 14470654 - 14470591
Alignment:
Q  51 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaa 114  Q
    |||||| |||| |||||||| |||||||||||||| |||||||||| |||||||||||||||||    
T  14470654 cacaagcattgcaacattgtgattggtcaatgtcaccaatgtcacccaactctatgtcacacaa 14470591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 110
Target Start/End: Complemental strand, 16514513 - 16514427
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||| |||||||||||||||||||||||||||| |||    ||| || ||||| |||||||| |||||||||| |||||||||||||    
T  16514513 tcacaatgcttgtgaaagagagagaaacacaagcattatggcatagtgattggccaatgtcaccaatgtcacccaactctatgtcac 16514427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 8534227 - 8534164
Alignment:
Q  32 cttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcac 95  Q
    ||||||||| |||||||||||||| ||||   |||||||||||| |||||||||||||||||||    
T  8534227 cttgtgaaatagagagaaacacaaatatttttacattgtaattgatcaatgtcatcaatgtcac 8534164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 67 - 114
Target Start/End: Original strand, 45213892 - 45213939
Alignment:
Q  67 ttgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaa 114  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||    
T  45213892 ttgtgattggtcaatgtcatcaatgtcacccaactctatgtcacacaa 45213939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 6722040 - 6721970
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtca 94  Q
    |||| ||| |||||||||||||||||||||||| ||||  | ||||| |||||||||||||| ||||||||    
T  6722040 tcacaatgtttgtgaaagagagagaaacacaagcattgtgatattgtgattggtcaatgtcaccaatgtca 6721970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 38933676 - 38933615
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 85  Q
    |||| |||||||||||||||||||||||||||| ||||   |||||| ||||||||||||||    
T  38933676 tcacaatgcttgtgaaagagagagaaacacaagcattgtggcattgtgattggtcaatgtca 38933615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 54 - 122
Target Start/End: Original strand, 14892339 - 14892407
Alignment:
Q  54 aagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaaatactacc 122  Q
    |||||||| |||||||| |||| ||||||||| |||||||| | ||||||||||||| ||||| |||||    
T  14892339 aagtattgtaacattgtgattgatcaatgtcaccaatgtcatccaactctatgtcacccaaatgctacc 14892407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 29 - 114
Target Start/End: Complemental strand, 24116004 - 24115919
Alignment:
Q  29 atgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaa 114  Q
    ||||||||||||||| | |||||||| | |||| |||||||| ||||| |||||| | |||||| ||  |||||||| ||||||||    
T  24116004 atgcttgtgaaagagtgtgaaacacaggcattgtaacattgtgattggccaatgttaccaatgtgactcaactctatctcacacaa 24115919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 15011369 - 15011297
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcacc 96  Q
    |||| |||||||||||||||||||||||||||  ||||   |||||| ||||| |||| ||| ||||||||||    
T  15011369 tcacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatatcaccaatgtcacc 15011297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 14229402 - 14229453
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattg 75  Q
    |||| |||||||||||||||||||||||||||| ||||  ||||||| ||||    
T  14229402 tcacaatgcttgtgaaagagagagaaacacaagcattgtgacattgtgattg 14229453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 110
Target Start/End: Original strand, 16514500 - 16514559
Alignment:
Q  51 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||||| ||||  ||||||| |||||||||||||| |||| ||||| |||||||||||||    
T  16514500 cacaagcattgtgacattgtgattggtcaatgtcaccaatctcacccaactctatgtcac 16514559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 67 - 110
Target Start/End: Complemental strand, 29508736 - 29508693
Alignment:
Q  67 ttgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||| |||||||||||||| |||||||||| |||||||||||||    
T  29508736 ttgtgattggtcaatgtcaccaatgtcacccaactctatgtcac 29508693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 2828673 - 2828612
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 85  Q
    |||| |||||| ||||||||||||||||||||| |||   ||||||| ||||| ||||||||    
T  2828673 tcacaatgcttctgaaagagagagaaacacaagcattttgacattgtgattggccaatgtca 2828612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 2894052 - 2893991
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 85  Q
    |||| |||||||||||||||||||||| ||||| ||||  | ||||| ||||| ||||||||    
T  2894052 tcacaatgcttgtgaaagagagagaaatacaagcattgtgagattgtgattggccaatgtca 2893991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 110
Target Start/End: Complemental strand, 6217272 - 6217227
Alignment:
Q  65 cattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||||| ||||| |||||||| |||||||||| |||||||||||||    
T  6217272 cattgtgattggccaatgtcaccaatgtcacccaactctatgtcac 6217227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 110
Target Start/End: Original strand, 9173035 - 9173116
Alignment:
Q  29 atgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||||| | ||||| ||||||| ||||| ||||   |||||| ||||| |||| ||| |||||||||| |||||||||||||    
T  9173035 atgcttataaaagaaagagaaatacaagcattgtggcattgtgattggccaatatcaccaatgtcacccaactctatgtcac 9173116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 6217278 - 6217334
Alignment:
Q  29 atgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 85  Q
    |||||||||||||||||||||||||||  ||||   |||||| ||||| ||||||||    
T  6217278 atgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtca 6217334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 29925624 - 29925680
Alignment:
Q  29 atgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 85  Q
    |||||||||||||||||||||||||||  ||||   |||||| ||||| ||||||||    
T  29925624 atgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtca 29925680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 51 - 110
Target Start/End: Complemental strand, 49765 - 49706
Alignment:
Q  51 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||||| ||||  ||||||| ||||||||||||||||||||||||| |||||||||||||    
T  49765 cacaagcattgtgacattgtgattggtcaatgtcatcaatgtcacccaactctatgtcac 49706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 49752 - 49813
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 85  Q
    |||| |||||||||||||| ||||||||||||| ||||   |||||| ||||| ||||||||    
T  49752 tcacaatgcttgtgaaagaaagagaaacacaagcattgtggcattgtgattggccaatgtca 49813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 24 - 110
Target Start/End: Complemental strand, 24587550 - 24587464
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    |||| |||||||||||| || |||||||||||| ||||  ||||||| ||||  ||||||||  ||||||||| |||||||||||||    
T  24587550 tcacaatgcttgtgaaaaagcgagaaacacaagcattgtgacattgtgattgaccaatgtcactaatgtcacccaactctatgtcac 24587464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 551223 - 551307
Alignment:
Q  33 ttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaaata 117  Q
    |||||||||||||||||||||||| ||||   |||||| ||||| |||||||| |||| ||| | || |||||||||| ||||||    
T  551223 ttgtgaaagagagagaaacacaagcattgtggcattgtgattggccaatgtcaccaatatcatccaattctatgtcacccaaata 551307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 114
Target Start/End: Complemental strand, 17750991 - 17750902
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaa 114  Q
    |||| |||||||||||||||||| ||| ||||  ||||  ||||||| ||||  |||||||| |||||||| | |||||||||||||||||    
T  17750991 tcacaatgcttgtgaaagagagataaatacaaacattgtgacattgtgattgaccaatgtcaccaatgtcatc-aactctatgtcacacaa 17750902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 13043550 - 13043509
Alignment:
Q  20 aatatcaccatgcttgtgaaagagagagaaacacaagtattg 61  Q
    |||||||| |||||||||||||||||||||||||||| ||||    
T  13043550 aatatcacaatgcttgtgaaagagagagaaacacaagcattg 13043509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 31654390 - 31654333
Alignment:
Q  28 catgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 85  Q
    |||| |||||||||||||||||||||||| ||||  ||||||| ||||| ||||||||    
T  31654390 catgtttgtgaaagagagagaaacacaagcattgtgacattgtgattggccaatgtca 31654333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 24618655 - 24618711
Alignment:
Q  29 atgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 85  Q
    |||||| ||||||||||||||||||||| ||||  ||||||| ||||||||| ||||    
T  24618655 atgcttatgaaagagagagaaacacaagcattgtgacattgtgattggtcaacgtca 24618711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 114
Target Start/End: Original strand, 17750978 - 17751041
Alignment:
Q  51 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaa 114  Q
    |||||| ||||  ||||||| || || ||||||||||||| ||||| |||||||||||||||||    
T  17750978 cacaagcattgtgacattgtgatcggccaatgtcatcaatatcacccaactctatgtcacacaa 17751041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 110
Target Start/End: Complemental strand, 24618650 - 24618604
Alignment:
Q  64 acattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    ||||||| |||| ||||||||| |||||||||| |||||||||||||    
T  24618650 acattgtgattgatcaatgtcaccaatgtcacccaactctatgtcac 24618604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 12343189 - 12343152
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattg 61  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  12343189 tcacaatgcttgtgaaagagagagaaacacaagcattg 12343152  T

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Target: scaffold0180 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 19184 - 19119
Alignment:
Q  51 cacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcacacaaat 116  Q
    |||||| ||||  ||||||| |||| ||||| |||||||||||||| |||||||||||||||||||    
T  19184 cacaagcattgtgacattgtgattgatcaatatcatcaatgtcacccaactctatgtcacacaaat 19119  T

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Target: scaffold0161 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 110
Target Start/End: Original strand, 27277 - 27355
Alignment:
Q  32 cttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtcatcaatgtcaccaaactctatgtcac 110  Q
    ||||||||||||||||||||| ||| ||||   |||||| ||||| |||| ||| |||||||||| |||||||| ||||    
T  27277 cttgtgaaagagagagaaacagaagcattgtggcattgtgattggccaatatcaccaatgtcacccaactctatatcac 27355  T

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Target: scaffold1033 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1033
Description:

Target: scaffold1033; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 2302 - 2265
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattg 61  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  2302 tcacaatgcttgtgaaagagagagaaacacaagcattg 2265  T

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Target: scaffold1029 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1029
Description:

Target: scaffold1029; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 2302 - 2265
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattg 61  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  2302 tcacaatgcttgtgaaagagagagaaacacaagcattg 2265  T

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Target: scaffold0047 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 63846 - 63785
Alignment:
Q  24 tcaccatgcttgtgaaagagagagaaacacaagtattggaacattgtaattggtcaatgtca 85  Q
    |||| |||||||||||||||||||||||||||  ||||   |||||| ||||| ||||||||    
T  63846 tcacaatgcttgtgaaagagagagaaacacaaacattgtggcattgtgattggccaatgtca 63785  T

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