View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8132_low_25 (Length: 347)

Name: NF8132_low_25
Description: NF8132
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8132_low_25
NF8132_low_25
[»] chr2 (38 HSPs)
chr2 (13-325)||(15779912-15780220)
chr2 (144-229)||(11513858-11513945)
chr2 (139-227)||(656802-656892)
chr2 (144-229)||(1056376-1056462)
chr2 (141-218)||(6227708-6227787)
chr2 (141-226)||(18962064-18962151)
chr2 (139-218)||(10143127-10143208)
chr2 (169-215)||(39983329-39983375)
chr2 (139-225)||(3673762-3673850)
chr2 (139-229)||(5133727-5133819)
chr2 (182-227)||(6988115-6988160)
chr2 (147-229)||(9395093-9395177)
chr2 (139-205)||(17952748-17952816)
chr2 (168-229)||(29316798-29316859)
chr2 (139-205)||(41407030-41407098)
chr2 (148-205)||(5043607-5043666)
chr2 (139-231)||(30552665-30552757)
chr2 (185-229)||(43065473-43065517)
chr2 (169-229)||(43985026-43985086)
chr2 (168-231)||(22681206-22681269)
chr2 (142-218)||(28803540-28803618)
chr2 (139-227)||(34054926-34055016)
chr2 (171-229)||(2410068-2410126)
chr2 (139-221)||(6561318-6561400)
chr2 (142-205)||(14666506-14666571)
chr2 (146-201)||(33942112-33942169)
chr2 (168-226)||(43141857-43141915)
chr2 (142-197)||(43529906-43529963)
chr2 (123-205)||(13866828-13866912)
chr2 (168-205)||(18066114-18066151)
chr2 (168-205)||(25800815-25800852)
chr2 (139-201)||(33256695-33256759)
chr2 (144-218)||(37292381-37292457)
chr2 (171-231)||(6993745-6993805)
chr2 (169-205)||(7862740-7862776)
chr2 (181-229)||(9174814-9174862)
chr2 (173-205)||(34926955-34926987)
chr2 (163-227)||(43205290-43205354)
[»] chr6 (23 HSPs)
chr6 (139-229)||(1402951-1403043)
chr6 (169-231)||(2117390-2117452)
chr6 (169-227)||(24838768-24838826)
chr6 (140-229)||(281871-281962)
chr6 (242-329)||(2460074-2460161)
chr6 (168-227)||(4246396-4246455)
chr6 (168-227)||(25100029-25100088)
chr6 (168-229)||(1275135-1275196)
chr6 (139-205)||(4006669-4006737)
chr6 (168-205)||(5623142-5623179)
chr6 (168-229)||(28088245-28088306)
chr6 (181-226)||(33067157-33067202)
chr6 (170-226)||(2112188-2112244)
chr6 (141-229)||(2027429-2027519)
chr6 (139-229)||(24836225-24836314)
chr6 (182-229)||(31812036-31812083)
chr6 (175-229)||(1401102-1401156)
chr6 (139-202)||(9093606-9093671)
chr6 (188-229)||(2205613-2205654)
chr6 (169-202)||(7485118-7485151)
chr6 (146-204)||(10016507-10016567)
chr6 (184-229)||(10476145-10476189)
chr6 (146-219)||(3785733-3785808)
[»] chr4 (33 HSPs)
chr4 (139-229)||(30207594-30207685)
chr4 (103-204)||(24443961-24444060)
chr4 (123-229)||(53943546-53943653)
chr4 (168-229)||(29263356-29263417)
chr4 (139-201)||(53626731-53626795)
chr4 (129-218)||(18630625-18630716)
chr4 (163-231)||(21157749-21157817)
chr4 (163-227)||(23819070-23819134)
chr4 (163-231)||(42866049-42866117)
chr4 (242-329)||(27123275-27123362)
chr4 (139-202)||(24160545-24160610)
chr4 (139-229)||(24929448-24929540)
chr4 (168-229)||(29778781-29778842)
chr4 (123-228)||(30338615-30338723)
chr4 (141-205)||(32066457-32066522)
chr4 (139-229)||(49219094-49219186)
chr4 (170-231)||(52735110-52735171)
chr4 (128-218)||(54325071-54325163)
chr4 (141-203)||(55870390-55870454)
chr4 (141-229)||(8422862-8422950)
chr4 (139-211)||(25885814-25885888)
chr4 (181-231)||(17822886-17822936)
chr4 (139-218)||(17884023-17884104)
chr4 (139-218)||(47118999-47119080)
chr4 (141-215)||(10192241-10192317)
chr4 (175-216)||(16494841-16494882)
chr4 (168-229)||(36048519-36048580)
chr4 (168-229)||(36722692-36722753)
chr4 (182-227)||(56007679-56007724)
chr4 (169-229)||(2900327-2900387)
chr4 (185-229)||(4798589-4798633)
chr4 (169-205)||(9841053-9841089)
chr4 (181-229)||(24370976-24371024)
[»] chr5 (36 HSPs)
chr5 (139-229)||(14295461-14295553)
chr5 (139-229)||(37588383-37588475)
chr5 (136-218)||(39257421-39257504)
chr5 (139-228)||(12460025-12460115)
chr5 (168-229)||(40205097-40205156)
chr5 (139-224)||(12595768-12595855)
chr5 (177-229)||(17368671-17368723)
chr5 (139-229)||(37526222-37526314)
chr5 (129-231)||(35960359-35960462)
chr5 (169-231)||(2568645-2568707)
chr5 (146-227)||(26390815-26390897)
chr5 (168-229)||(18543220-18543280)
chr5 (139-229)||(28586789-28586881)
chr5 (139-233)||(34245679-34245775)
chr5 (139-229)||(37690659-37690752)
chr5 (170-231)||(41535124-41535185)
chr5 (170-226)||(29054896-29054952)
chr5 (142-226)||(15003540-15003626)
chr5 (169-228)||(32408616-32408675)
chr5 (170-204)||(1244109-1244143)
chr5 (146-205)||(2569742-2569803)
chr5 (141-228)||(4855655-4855744)
chr5 (123-161)||(6593239-6593277)
chr5 (146-229)||(9202771-9202856)
chr5 (168-218)||(12975333-12975383)
chr5 (163-229)||(41016160-41016226)
chr5 (168-229)||(6587130-6587191)
chr5 (168-229)||(7319392-7319453)
chr5 (168-229)||(10272454-10272515)
chr5 (177-226)||(30217077-30217126)
chr5 (168-229)||(32172639-32172700)
chr5 (173-218)||(34117570-34117615)
chr5 (183-231)||(17777910-17777958)
chr5 (168-204)||(19138767-19138803)
chr5 (169-205)||(34205226-34205262)
chr5 (148-205)||(41277397-41277456)
[»] chr3 (42 HSPs)
chr3 (169-229)||(47904086-47904146)
chr3 (169-230)||(51510215-51510276)
chr3 (139-226)||(10101502-10101591)
chr3 (139-226)||(10212427-10212516)
chr3 (168-230)||(19679782-19679844)
chr3 (168-229)||(14548744-14548805)
chr3 (139-229)||(24887306-24887398)
chr3 (169-229)||(27792859-27792919)
chr3 (136-229)||(28306110-28306205)
chr3 (163-219)||(43875629-43875685)
chr3 (168-229)||(2318630-2318692)
chr3 (139-227)||(36646407-36646497)
chr3 (175-229)||(42733960-42734014)
chr3 (168-229)||(21367653-21367714)
chr3 (168-205)||(22214706-22214743)
chr3 (123-205)||(38462220-38462304)
chr3 (139-202)||(43116478-43116543)
chr3 (141-194)||(20192664-20192719)
chr3 (141-223)||(33965518-33965604)
chr3 (168-204)||(41057024-41057060)
chr3 (189-229)||(44284103-44284143)
chr3 (141-229)||(1816540-1816630)
chr3 (163-218)||(20502102-20502157)
chr3 (128-205)||(20874351-20874430)
chr3 (175-218)||(22203423-22203466)
chr3 (169-204)||(37788847-37788882)
chr3 (136-203)||(31337450-31337519)
chr3 (168-218)||(33405201-33405251)
chr3 (142-205)||(40122800-40122864)
chr3 (175-229)||(44295522-44295576)
chr3 (148-201)||(2863780-2863833)
chr3 (139-204)||(21865533-21865598)
chr3 (139-229)||(45432962-45433054)
chr3 (168-229)||(48286833-48286894)
chr3 (169-229)||(1125789-1125849)
chr3 (169-205)||(21872318-21872354)
chr3 (183-227)||(24158528-24158572)
chr3 (175-231)||(24785198-24785254)
chr3 (128-205)||(25183035-25183114)
chr3 (171-227)||(26603182-26603238)
chr3 (169-229)||(27290924-27290984)
chr3 (139-204)||(36783382-36783449)
[»] chr7 (36 HSPs)
chr7 (139-229)||(44241815-44241906)
chr7 (139-202)||(9527140-9527205)
chr7 (142-229)||(44151503-44151592)
chr7 (139-205)||(11208404-11208472)
chr7 (141-218)||(17989057-17989136)
chr7 (123-203)||(1417203-1417285)
chr7 (123-196)||(45813236-45813311)
chr7 (140-203)||(5006558-5006623)
chr7 (149-226)||(36370635-36370713)
chr7 (139-229)||(3610763-3610855)
chr7 (141-226)||(22759143-22759230)
chr7 (169-225)||(24895343-24895399)
chr7 (169-225)||(24909651-24909707)
chr7 (169-225)||(36484062-36484118)
chr7 (182-229)||(24363624-24363671)
chr7 (163-226)||(27481320-27481383)
chr7 (168-231)||(38010700-38010763)
chr7 (168-227)||(40439040-40439099)
chr7 (141-205)||(45777218-45777284)
chr7 (139-218)||(30456484-30456565)
chr7 (181-231)||(46056031-46056081)
chr7 (175-229)||(46104590-46104644)
chr7 (168-218)||(46104646-46104696)
chr7 (169-218)||(1350276-1350325)
chr7 (168-229)||(3559021-3559082)
chr7 (168-229)||(21185075-21185135)
chr7 (169-218)||(25558225-25558274)
chr7 (169-218)||(25558423-25558472)
chr7 (181-226)||(33346806-33346851)
chr7 (139-205)||(40689033-40689101)
chr7 (184-229)||(48917369-48917414)
chr7 (169-205)||(1358244-1358280)
chr7 (144-226)||(4966116-4966200)
chr7 (167-231)||(6263384-6263448)
chr7 (139-194)||(33894578-33894634)
chr7 (139-231)||(46825053-46825148)
[»] chr1 (47 HSPs)
chr1 (168-229)||(25005820-25005881)
chr1 (122-229)||(7472250-7472358)
chr1 (127-229)||(28689475-28689581)
chr1 (147-229)||(30257646-30257730)
chr1 (139-229)||(37842378-37842470)
chr1 (169-205)||(4078196-4078232)
chr1 (169-229)||(6231839-6231899)
chr1 (139-231)||(27738201-27738295)
chr1 (141-229)||(30371105-30371195)
chr1 (163-205)||(12564921-12564963)
chr1 (129-229)||(14629989-14630093)
chr1 (168-218)||(25006068-25006118)
chr1 (173-231)||(27887139-27887197)
chr1 (139-217)||(5756721-5756801)
chr1 (139-217)||(6074429-6074509)
chr1 (168-217)||(17269236-17269285)
chr1 (170-223)||(17422967-17423020)
chr1 (139-205)||(33527194-33527262)
chr1 (172-229)||(39347990-39348047)
chr1 (169-229)||(23902090-23902150)
chr1 (188-232)||(38651451-38651495)
chr1 (141-229)||(44940300-44940388)
chr1 (139-231)||(4622048-4622142)
chr1 (188-227)||(5150943-5150982)
chr1 (168-227)||(7218099-7218158)
chr1 (139-191)||(15360849-15360903)
chr1 (184-231)||(27963391-27963438)
chr1 (168-227)||(35017562-35017621)
chr1 (169-231)||(40751151-40751214)
chr1 (139-203)||(49517025-49517091)
chr1 (139-229)||(49557096-49557194)
chr1 (139-231)||(52286633-52286727)
chr1 (175-229)||(7137021-7137075)
chr1 (163-205)||(8130417-8130459)
chr1 (168-226)||(15515527-15515585)
chr1 (171-229)||(25479570-25479628)
chr1 (175-229)||(35590915-35590969)
chr1 (163-229)||(44422680-44422746)
chr1 (139-230)||(48830098-48830191)
chr1 (163-224)||(4549570-4549631)
chr1 (139-229)||(31517763-31517855)
chr1 (174-219)||(42556664-42556709)
chr1 (147-229)||(45205031-45205115)
chr1 (189-229)||(23373335-23373375)
chr1 (139-227)||(30259511-30259602)
chr1 (169-229)||(37241845-37241905)
chr1 (246-318)||(44928125-44928197)
[»] chr8 (33 HSPs)
chr8 (142-227)||(39551234-39551321)
chr8 (103-204)||(35869760-35869859)
chr8 (142-231)||(2093237-2093328)
chr8 (139-228)||(10437840-10437930)
chr8 (139-215)||(7714197-7714275)
chr8 (143-205)||(35298524-35298589)
chr8 (136-218)||(39866768-39866855)
chr8 (144-218)||(4763878-4763954)
chr8 (174-227)||(6509328-6509381)
chr8 (168-229)||(7645964-7646025)
chr8 (168-205)||(9834836-9834873)
chr8 (168-229)||(39561564-39561625)
chr8 (181-229)||(7918796-7918844)
chr8 (139-231)||(4558753-4558847)
chr8 (145-205)||(34770853-34770915)
chr8 (168-227)||(1561260-1561321)
chr8 (168-227)||(2091747-2091808)
chr8 (163-229)||(11813128-11813194)
chr8 (163-229)||(30013199-30013265)
chr8 (168-229)||(11795078-11795139)
chr8 (139-205)||(27728068-27728136)
chr8 (169-226)||(29973068-29973125)
chr8 (168-205)||(31884580-31884617)
chr8 (188-229)||(33553246-33553287)
chr8 (139-201)||(42597356-42597420)
chr8 (163-200)||(43704430-43704467)
chr8 (139-202)||(926442-926508)
chr8 (185-229)||(4762512-4762556)
chr8 (169-217)||(10460590-10460638)
chr8 (169-205)||(24558840-24558876)
chr8 (181-229)||(27028830-27028878)
chr8 (169-229)||(28769362-28769422)
chr8 (187-227)||(29695527-29695567)
[»] scaffold0167 (1 HSPs)
scaffold0167 (169-230)||(17263-17324)
[»] scaffold0100 (1 HSPs)
scaffold0100 (139-204)||(42572-42638)
[»] scaffold0024 (1 HSPs)
scaffold0024 (139-205)||(27531-27599)
[»] scaffold0053 (1 HSPs)
scaffold0053 (139-200)||(20134-20197)


Alignment Details
Target: chr2 (Bit Score: 272; Significance: 1e-152; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 13 - 325
Target Start/End: Original strand, 15779912 - 15780220
Alignment:
Q  13 aatatgtactcacttttggttttagtttaaaaaatgtgacatctaattgttttctaagaattgattcattgattcaaatgtatataagagcttatcatat 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  15779912 aatatgtactcacttttggttttagtttaaaaaatgtgacatctaattggtttctaagaatcgattcattgattcatatgtatataagagcttatcatat 15780011  T
Q  113 aagttcttaattatttataaacaatctctataacaaaagataaaataaataaacggttttcatataatctataagttgttttcataagctatcgtgcaga 212  Q
    |||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15780012 aagttctta----tttataaacaatctctataacaaaagataaaataaataaacggttttcatataatctataagttgttttcataagctatcgtgcaga 15780107  T
Q  213 gcttatagaaataagctaagatgaaagttaagacatgtcattaattgtttctatgagatctttcaaacaatcttacaagtagttatgctagtcgatacgc 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||    
T  15780108 gcttatagaaataagctaagatgaaagttaagacatgtcattaattgtttctatgagatctttcaaacaatcttacaaggggttatgctagtcgataagc 15780207  T
Q  313 tcaaataagtaaa 325  Q
    |||||||||||||    
T  15780208 tcaaataagtaaa 15780220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 229
Target Start/End: Original strand, 11513858 - 11513945
Alignment:
Q  144 aacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    ||||||||||||||||||   |||  |||||||||||| ||||||||||||||||||||||||| || ||| ||| | ||||||||||    
T  11513858 aacaaaagataaaataaagtcaaattgttttcatataagctataagttgttttcataagctatcatggagaacttttggaaataagct 11513945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 139 - 227
Target Start/End: Complemental strand, 656892 - 656802
Alignment:
Q  139 tctataacaaaagataaaata-aat-aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataag 227  Q
    ||||||||||||||||||||| ||| |||  |||||| ||||| || ||||||| |||||||||||||| ||||||||||||  |||||||    
T  656892 tctataacaaaagataaaatataatcaaattgttttcgtataagctgtaagttgatttcataagctatcttgcagagcttatgaaaataag 656802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 144 - 229
Target Start/End: Complemental strand, 1056462 - 1056376
Alignment:
Q  144 aacaaaagataaaataaata-aacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||||||||||||||||||| ||   ||||||||||| || |||| | ||||||||||||||| || |||| |||||||||||||||    
T  1056462 aacaaaagataaaataaatacaaattttttcatataacctgtaagctattttcataagctatcttgaagagtttatagaaataagct 1056376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 6227708 - 6227787
Alignment:
Q  141 tataacaaaagataaaataaa--taaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttat 218  Q
    |||||||||||||||||| ||  ||||| ||||| |||||| |||||||| |||||||||||||||  || |||||||||    
T  6227708 tataacaaaagataaaattaaattaaaccgtttttatataaactataagtggttttcataagctattttggagagcttat 6227787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 141 - 226
Target Start/End: Complemental strand, 18962151 - 18962064
Alignment:
Q  141 tataacaaaagataaaataaa--taaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataa 226  Q
    |||||||||||||||||||||  ||||| |||||||||||| ||||||  | ||||||||||||||| || ||||  ||| |||||||    
T  18962151 tataacaaaagataaaataaagttaaactgttttcatataagctataaactattttcataagctatcatggagagactatggaaataa 18962064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 218
Target Start/End: Original strand, 10143127 - 10143208
Alignment:
Q  139 tctataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttat 218  Q
    |||||||||||||||||||| ||   |||| ||||| |||||| ||||||||| ||||||||||||||| || |||| ||||    
T  10143127 tctataacaaaagataaaattaagtcaaactgtttttatataagctataagtttttttcataagctatcatggagagtttat 10143208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 39983329 - 39983375
Alignment:
Q  169 ttttcatataatctataagttgttttcataagctatcgtgcagagct 215  Q
    ||||||||||| ||||||||||||||||||||||||| || ||||||    
T  39983329 ttttcatataagctataagttgttttcataagctatcctggagagct 39983375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 139 - 225
Target Start/End: Original strand, 3673762 - 3673850
Alignment:
Q  139 tctataacaaaagataaaataaa--taaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaata 225  Q
    |||||||||||| ||||||||||  ||||  ||||||||||||  |||||||| ||||||| ||||||| || |||||||  |||||||    
T  3673762 tctataacaaaatataaaataaagttaaattgttttcatataagttataagtttttttcattagctatcttgaagagcttgcagaaata 3673850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 5133727 - 5133819
Alignment:
Q  139 tctataacaaaagataaaataa--ataaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    ||||||||||||||||||||||  |||||| ||||| ||||||  |||||| |||||||| ||| ||||    ||||||||| ||||||||||    
T  5133727 tctataacaaaagataaaataaagataaactgtttttatataagatataagctgttttcaaaagttatctaagagagcttatggaaataagct 5133819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 6988115 - 6988160
Alignment:
Q  182 tataagttgttttcataagctatcgtgcagagcttatagaaataag 227  Q
    |||||||||||||||||||||||| || |||| |||||||||||||    
T  6988115 tataagttgttttcataagctatcttgaagagtttatagaaataag 6988160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 147 - 229
Target Start/End: Original strand, 9395093 - 9395177
Alignment:
Q  147 aaaagataaaataaa--taaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||||||||||||||  ||||  |||||||||||||||||||| ||||||||| || |||  || |||||||||  |||||||||    
T  9395093 aaaagataaaataaagctaaattgttttcatataatctataagctgttttcattagttattctgtagagcttatgaaaataagct 9395177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 17952816 - 17952748
Alignment:
Q  139 tctataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctatc 205  Q
    |||||||||||||||||||||||   ||||  ||||||||||| ||| ||| |||||||||||||||||    
T  17952816 tctataacaaaagataaaataaagtcaaactattttcatataagctacaagatgttttcataagctatc 17952748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 229
Target Start/End: Complemental strand, 29316859 - 29316798
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    ||||||| |||||||||||| ||||||||| ||||||| || ||| ||||| ||||||||||    
T  29316859 gttttcacataatctataagctgttttcatcagctatcttggagaacttatggaaataagct 29316798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 41407030 - 41407098
Alignment:
Q  139 tctataacaaaagataaaataaa--taaacggttttcatataatctataagttgttttcataagctatc 205  Q
    ||||||||| |||||||||||||  ||||| | |||  |||| ||||||||||||||||||||||||||    
T  41407030 tctataacacaagataaaataaagttaaactgcttttgtatattctataagttgttttcataagctatc 41407098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 205
Target Start/End: Complemental strand, 5043666 - 5043607
Alignment:
Q  148 aaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctatc 205  Q
    ||||||||||||||   |||| |||||||||||| ||| |||||||||||||||||||||    
T  5043666 aaagataaaataaagtcaaactgttttcatataagctagaagttgttttcataagctatc 5043607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 30552757 - 30552665
Alignment:
Q  139 tctataacaaaagataaaataaataaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagctaa 231  Q
    |||||||||||| ||||| ||| | |||  ||||||||| | |||||| || ||||||||| ||||| |  ||||||||| ||||||||||||    
T  30552757 tctataacaaaatataaattaagttaacttttttcatatcagctataaattattttcataaactatcctagagagcttatggaaataagctaa 30552665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 43065517 - 43065473
Alignment:
Q  185 aagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||||||||||||||| ||||||| ||||||||| ||||||||||    
T  43065517 aagttgttttcataagttatcgtggagagcttattgaaataagct 43065473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 229
Target Start/End: Complemental strand, 43985086 - 43985026
Alignment:
Q  169 ttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    ||||| |||||  |||||||||||||||||||||||| || |||||||||  |||||||||    
T  43985086 ttttcgtataaattataagttgttttcataagctatcttgaagagcttatgaaaataagct 43985026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 168 - 231
Target Start/End: Complemental strand, 22681269 - 22681206
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagctaa 231  Q
    |||||||||||| ||||||| ||||||||||| ||||| |  ||| ||||| ||||||||||||    
T  22681269 gttttcatataagctataagctgttttcataatctatcctagagaacttatggaaataagctaa 22681206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 28803618 - 28803540
Alignment:
Q  142 ataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttat 218  Q
    ||||||||||||||||||||   |||| | |||||||||| ||| ||||||||||| ||| ||||| || |||||||||    
T  28803618 ataacaaaagataaaataaagtcaaactgatttcatataagctacaagttgttttcttaaactatcctggagagcttat 28803540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 139 - 227
Target Start/End: Complemental strand, 34055016 - 34054926
Alignment:
Q  139 tctataacaaaagataaaataaa--taaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataag 227  Q
    |||||||||||||||||||||||   |||| |||| ||||||   |||||| ||||||||||||||||| |  ||||||||  ||||||||    
T  34055016 tctataacaaaagataaaataaaggcaaactgtttacatatatgatataaggtgttttcataagctatcctatagagcttagtgaaataag 34054926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 229
Target Start/End: Complemental strand, 2410126 - 2410068
Alignment:
Q  171 ttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    ||||||||||||||||||||||| ||||   |||| || ||||||||| ||||||||||    
T  2410126 ttcatataatctataagttgtttgcatattttatcctgtagagcttatggaaataagct 2410068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 221
Target Start/End: Original strand, 6561318 - 6561400
Alignment:
Q  139 tctataacaaaagataaaataaataaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttataga 221  Q
    ||||| |||||||| |||| ||  ||||  ||||||||||| |||||||  ||||||| |||||||| || ||||||||||||    
T  6561318 tctattacaaaagacaaaaaaatcaaacttttttcatataacctataagaagttttcagaagctatcctggagagcttataga 6561400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 205
Target Start/End: Original strand, 14666506 - 14666571
Alignment:
Q  142 ataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctatc 205  Q
    ||||||||||||||||||||   |||| | ||||||||||  ||||||||||||||| ||||||||    
T  14666506 ataacaaaagataaaataaagtcaaactgatttcatataagttataagttgttttcacaagctatc 14666571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 201
Target Start/End: Original strand, 33942112 - 33942169
Alignment:
Q  146 caaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagc 201  Q
    ||||||||||||||||   |||| |||||||| ||| |||||||||||||||||||||    
T  33942112 caaaagataaaataaagtcaaactgttttcatgtaagctataagttgttttcataagc 33942169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 226
Target Start/End: Original strand, 43141857 - 43141915
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataa 226  Q
    |||| ||||||| ||||||| ||||||||||||||||| || |||| |||| |||||||    
T  43141857 gtttccatataagctataagatgttttcataagctatcctgaagagtttatggaaataa 43141915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 197
Target Start/End: Complemental strand, 43529963 - 43529906
Alignment:
Q  142 ataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcat 197  Q
    ||||||||||||||||||||   |||| | |||| |||||||||||||||||||||||    
T  43529963 ataacaaaagataaaataaaatcaaactgctttcctataatctataagttgttttcat 43529906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 13866828 - 13866912
Alignment:
Q  123 ttatttataaacaatctctataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctatc 205  Q
    |||| ||||||| || |||||| ||||||||||||| ||   |||| ||||| |||||||||||||| | ||||||| |||||||    
T  13866828 ttatgtataaactatttctatagcaaaagataaaattaagtcaaactgtttttatataatctataagctcttttcattagctatc 13866912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 205
Target Start/End: Original strand, 18066114 - 18066151
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctatc 205  Q
    |||||||||||| ||||||| |||||||||||||||||    
T  18066114 gttttcatataagctataagctgttttcataagctatc 18066151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 205
Target Start/End: Original strand, 25800815 - 25800852
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctatc 205  Q
    |||||||||||| ||||||| |||||||||||||||||    
T  25800815 gttttcatataagctataagctgttttcataagctatc 25800852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 201
Target Start/End: Original strand, 33256695 - 33256759
Alignment:
Q  139 tctataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagc 201  Q
    |||||||||| ||||||||||||   |||| |||||||||||| |||||||  ||||||||||||    
T  33256695 tctataacaatagataaaataaagtcaaactgttttcatataaactataagcagttttcataagc 33256759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 37292457 - 37292381
Alignment:
Q  144 aacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttat 218  Q
    ||||||||||||||||||   ||||  ||||||||||| |||| |||||||||| ||||||||| || |||| ||||    
T  37292457 aacaaaagataaaataaagtaaaactattttcatataagctattagttgttttcttaagctatcctggagagtttat 37292381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 6993805 - 6993745
Alignment:
Q  171 ttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagctaa 231  Q
    ||||||||| ||||| ||||||||||||||||||  |  |||||||||  |||||||||||    
T  6993805 ttcatataagctataggttgttttcataagctatgcttgagagcttatgaaaataagctaa 6993745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 205
Target Start/End: Original strand, 7862740 - 7862776
Alignment:
Q  169 ttttcatataatctataagttgttttcataagctatc 205  Q
    ||||||||||| |||||||||| ||||||||||||||    
T  7862740 ttttcatataagctataagttggtttcataagctatc 7862776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 229
Target Start/End: Original strand, 9174814 - 9174862
Alignment:
Q  181 ctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    ||||||| ||||||||||||||||| | ||||||||||  |||||||||    
T  9174814 ctataagctgttttcataagctatcttacagagcttatgaaaataagct 9174862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 205
Target Start/End: Original strand, 34926955 - 34926987
Alignment:
Q  173 catataatctataagttgttttcataagctatc 205  Q
    ||||||| |||||||||||||||||||||||||    
T  34926955 catataagctataagttgttttcataagctatc 34926987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 43205290 - 43205354
Alignment:
Q  163 aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataag 227  Q
    |||| ||||||||||||  |||||  |||||||||||||||||  | ||||||||| ||||||||    
T  43205290 aaactgttttcatataagatataatctgttttcataagctatcacggagagcttatggaaataag 43205354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 1402951 - 1403043
Alignment:
Q  139 tctataacaaaagataaaataaa--taaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||||||||||||||||||||||  |||||  ||||||||||| |||||| |||||||||||||||||| || ||| ||||||||||| ||||    
T  1402951 tctataacaaaagataaaataaagttaaactattttcatataagctataaattgttttcataagctatcatggagatcttatagaaattagct 1403043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 231
Target Start/End: Original strand, 2117390 - 2117452
Alignment:
Q  169 ttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagctaa 231  Q
    |||||||||||||||||||||||||||||||| |||| |  ||||||||| ||||||||||||    
T  2117390 ttttcatataatctataagttgttttcataagttatcctagagagcttattgaaataagctaa 2117452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 227
Target Start/End: Complemental strand, 24838826 - 24838768
Alignment:
Q  169 ttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataag 227  Q
    ||||||||||| ||||||| || |||||||||||||| || ||||||||||||||||||    
T  24838826 ttttcatataagctataagctgatttcataagctatcatggagagcttatagaaataag 24838768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 229
Target Start/End: Complemental strand, 281962 - 281871
Alignment:
Q  140 ctataacaaaagataaaataaa-taaacg-gttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||||||||||||||||||||| | |||  |||||||||||| ||||||| ||| ||||||||||||| |  |||||| || ||||||||||    
T  281962 ctataacaaaagataaaataaagtcaacttgttttcatataagctataagctgtgttcataagctatcctagagagctcatggaaataagct 281871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 329
Target Start/End: Complemental strand, 2460161 - 2460074
Alignment:
Q  242 aagacatgtcattaattgtttctatgagatctttcaaacaatcttacaagtagttatgctagtcgatacgctcaaataagtaaatcca 329  Q
    |||||||||||| | ||||||| || || ||| ||||||| ||| ||||||| ||||||||||  ||| |||||||||||| ||||||    
T  2460161 aagacatgtcataagttgtttccataagctctctcaaacagtctcacaagtacttatgctagtttataagctcaaataagttaatcca 2460074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 4246396 - 4246455
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataag 227  Q
    |||||||||||||||||||| ||||||||||||||||  || ||||| |||| |||||||    
T  4246396 gttttcatataatctataagctgttttcataagctattatggagagcatataaaaataag 4246455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 25100029 - 25100088
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataag 227  Q
    ||||||||| ||  |||||||||||||||||||||||| |  ||||||||||||||||||    
T  25100029 gttttcatagaagttataagttgttttcataagctatcttaaagagcttatagaaataag 25100088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 229
Target Start/End: Original strand, 1275135 - 1275196
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||||||||||| ||||||| |||||||||| | |||| || ||||||||| ||||||||||    
T  1275135 gttttcatataagctataagctgttttcatatgttatcctggagagcttatggaaataagct 1275196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 4006669 - 4006737
Alignment:
Q  139 tctataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctatc 205  Q
    ||||||||||| |||||||||||   |||  ||||| |||||| |||||||||||||||||||||||||    
T  4006669 tctataacaaatgataaaataaagtcaaattgtttttatataagctataagttgttttcataagctatc 4006737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 205
Target Start/End: Original strand, 5623142 - 5623179
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctatc 205  Q
    |||||||||||| |||||||||||||||||||||||||    
T  5623142 gttttcatataaactataagttgttttcataagctatc 5623179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 229
Target Start/End: Complemental strand, 28088306 - 28088245
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||||||||||| ||||||  ||||||||||||||||| || |||||| || ||||||||||    
T  28088306 gttttcatataagctataaactgttttcataagctatcatggagagctcatggaaataagct 28088245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 33067157 - 33067202
Alignment:
Q  181 ctataagttgttttcataagctatcgtgcagagcttatagaaataa 226  Q
    ||||||||||||||||||||||||| || ||||||| |||||||||    
T  33067157 ctataagttgttttcataagctatcttggagagcttgtagaaataa 33067202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 226
Target Start/End: Original strand, 2112188 - 2112244
Alignment:
Q  170 tttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataa 226  Q
    |||||||||| ||||||||||||||||||| ||||| |  || ||||||||||||||    
T  2112188 tttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataa 2112244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 141 - 229
Target Start/End: Complemental strand, 2027519 - 2027429
Alignment:
Q  141 tataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||||||||||||||||||||   ||||  ||||||||||| ||||||| |||| |||||||||| | || |||| ||| | |||||||||    
T  2027519 tataacaaaagataaaataaagtcaaactattttcatataacctataagctgttctcataagctagcatgtagagtttaaataaataagct 2027429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 24836314 - 24836225
Alignment:
Q  139 tctataacaaaagataaaataaa--taaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||||||||||||||||||||||   |||  |||||| ||||| ||||||   |||||| ||||||||| || ||||||||| ||||||||||    
T  24836314 tctataacaaaagataaaataaagtcaaattgttttcgtataaactataa---gttttcgtaagctatcatggagagcttatggaaataagct 24836225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 182 - 229
Target Start/End: Complemental strand, 31812083 - 31812036
Alignment:
Q  182 tataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||||||||||||||||||||||| || |||||||||  |||||||||    
T  31812083 tataagttgttttcataagctatcttggagagcttatgaaaataagct 31812036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 229
Target Start/End: Original strand, 1401102 - 1401156
Alignment:
Q  175 tataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    ||||| ||||||| ||||||||||||||||| || ||||||||| || |||||||    
T  1401102 tataagctataagctgttttcataagctatcatggagagcttatggagataagct 1401156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 202
Target Start/End: Complemental strand, 9093671 - 9093606
Alignment:
Q  139 tctataacaaaagataaaataaa--taaacggttttcatataatctataagttgttttcataagct 202  Q
    |||||| ||||||||||||||||  ||||  |||||| ||||| ||||||| ||||||||||||||    
T  9093671 tctatatcaaaagataaaataaagttaaattgttttcgtataagctataagctgttttcataagct 9093606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 229
Target Start/End: Complemental strand, 2205654 - 2205613
Alignment:
Q  188 ttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||||||||||||||||| || ||||||||| ||||||||||    
T  2205654 ttgttttcataagctatcttggagagcttatggaaataagct 2205613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 202
Target Start/End: Complemental strand, 7485151 - 7485118
Alignment:
Q  169 ttttcatataatctataagttgttttcataagct 202  Q
    ||||||||||| ||||||||||||||||||||||    
T  7485151 ttttcatataagctataagttgttttcataagct 7485118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 204
Target Start/End: Original strand, 10016507 - 10016567
Alignment:
Q  146 caaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctat 204  Q
    |||||||||||||||||  |||| ||| |||||||| | ||||| ||||||||||||||||    
T  10016507 caaaagataaaataaatttaaactgttctcatataagccataagctgttttcataagctat 10016567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 229
Target Start/End: Complemental strand, 10476189 - 10476145
Alignment:
Q  184 taagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||||||||||||||||||||| || ||||| ||||||||||||||    
T  10476189 taagttgttttcataagctatcttggagagc-tatagaaataagct 10476145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 3785808 - 3785733
Alignment:
Q  146 caaaagataaaataaa--taaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttata 219  Q
    ||||||||||||||||  ||||| |||||| ||||| ||||||| ||||||  ||||||||  || ||||||||||    
T  3785808 caaaagataaaataaagttaaactgttttcgtataagctataagctgtttttgtaagctattctggagagcttata 3785733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 30207685 - 30207594
Alignment:
Q  139 tctataacaaaagataaaataaat-aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||||||||||| ||||||||||| |||| |||||||||||| ||||||||||||||||||||||| | |  |||| |||| ||||||||||    
T  30207685 tctataacaaaaaataaaataaatcaaactgttttcatataagctataagttgttttcataagctaccttagagagattatggaaataagct 30207594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 204
Target Start/End: Original strand, 24443961 - 24444060
Alignment:
Q  103 cttatcatataagttcttaattatttataaacaatctctataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataag 200  Q
    |||||||||||||||||||    | ||||| | || |||| ||||||| |||||||||||  ||||  ||||||||||| ||||||||||||||||||||    
T  24443961 cttatcatataagttctta----tgtataagcgatttctacaacaaaatataaaataaattcaaacaattttcatataagctataagttgttttcataag 24444056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 229
Target Start/End: Original strand, 53943546 - 53943653
Alignment:
Q  123 ttatttataaacaatctctataacaaaagataaaataaa-taaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttataga 221  Q
    |||||||||| | || | ||||||||| ||| ||||||| | ||| |||||||||||| ||||||||||||| |||||| | || || ||||||||| ||    
T  53943546 ttatttataagccatttttataacaaaggatgaaataaaatcaactgttttcatataaactataagttgtttacataagttgtcatggagagcttatgga 53943645  T
Q  222 aataagct 229  Q
    ||||||||    
T  53943646 aataagct 53943653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 229
Target Start/End: Original strand, 29263356 - 29263417
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    ||||||| |||| | ||||||||||||||||||||||| |||||||||| | ||||||||||    
T  29263356 gttttcaaataagcgataagttgttttcataagctatcctgcagagcttgtggaaataagct 29263417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 201
Target Start/End: Original strand, 53626731 - 53626795
Alignment:
Q  139 tctataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagc 201  Q
    ||||||||||||||||||||||||  |||  |||||||||||| ||||||| |||||||||||||    
T  53626731 tctataacaaaagataaaataaattcaaaatgttttcatataagctataagctgttttcataagc 53626795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 129 - 218
Target Start/End: Original strand, 18630625 - 18630716
Alignment:
Q  129 ataaacaatctctataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttat 218  Q
    |||||| || || ||||||||||||||||||||   ||  ||||||||||||| |||||||||||||||| ||||||||   ||||||||||    
T  18630625 ataaactatttcaataacaaaagataaaataaagtcaattggttttcatataagctataagttgttttcacaagctatccaacagagcttat 18630716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 21157749 - 21157817
Alignment:
Q  163 aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagctaa 231  Q
    |||| |||||||| ||| ||||||| |||||||||| |||||| || ||||||||| ||||||||||||    
T  21157749 aaactgttttcatgtaagctataagatgttttcatatgctatcctgaagagcttatggaaataagctaa 21157817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 23819070 - 23819134
Alignment:
Q  163 aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataag 227  Q
    |||| ||||||||||||  |||||  ||||||||||||||||| || ||||||||||||||||||    
T  23819070 aaactgttttcatataagttataacatgttttcataagctatcttgaagagcttatagaaataag 23819134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 42866049 - 42866117
Alignment:
Q  163 aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagctaa 231  Q
    |||| ||||| |||||| ||||||||||||||||||||||||| |  ||||||||| ||| ||||||||    
T  42866049 aaactgtttttatataagctataagttgttttcataagctatccttgagagcttatggaagtaagctaa 42866117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 329
Target Start/End: Complemental strand, 27123362 - 27123275
Alignment:
Q  242 aagacatgtcattaattgtttctatgagatctttcaaacaatcttacaagtagttatgctagtcgatacgctcaaataagtaaatcca 329  Q
    |||||||||||| | ||||||| || || ||| ||||||| ||| ||||||| ||||||||||  ||| |||||||||||| ||||||    
T  27123362 aagacatgtcataagttgtttccataagctctctcaaacagtctcacaagtacttatgctagtttataagctcaaataagttaatcca 27123275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 202
Target Start/End: Complemental strand, 24160610 - 24160545
Alignment:
Q  139 tctataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagct 202  Q
    ||||||||||||||||| ||||||  ||||  ||||||| ||| ||||||||||||||||||||||    
T  24160610 tctataacaaaagataatataaattcaaactattttcatgtaagctataagttgttttcataagct 24160545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 24929448 - 24929540
Alignment:
Q  139 tctataacaaaagataaaataaata--aacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||||||||||||||||||||||    ||| ||||||||| || ||||||||||||||||||| || |  |  ||||||||| ||||||||||    
T  24929448 tctataacaaaagataaaataaagtctaactgttttcataaaagctataagttgttttcataaactctactagagagcttatggaaataagct 24929540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 229
Target Start/End: Original strand, 29778781 - 29778842
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||||||||||| || |||||||||||||||||||| | || |||||||||  |||||||||    
T  29778781 gttttcatataagctgtaagttgttttcataagctaccttgaagagcttatgaaaataagct 29778842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 123 - 228
Target Start/End: Complemental strand, 30338723 - 30338615
Alignment:
Q  123 ttatttataaacaatctctataacaaaagataaaataaa--taaacggttttcatataatctataagttg-ttttcataagctatcgtgcagagcttata 219  Q
    |||| ||||||| || |||||||||||||||| ||||||  ||||| |||||||||||| ||||||  || |||||||||||| || || |||| ||||     
T  30338723 ttatgtataaactatttctataacaaaagatagaataaagttaaactgttttcatataagctataaactgtttttcataagctctcttggagagtttatg 30338624  T
Q  220 gaaataagc 228  Q
     ||||||||    
T  30338623 aaaataagc 30338615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 32066522 - 32066457
Alignment:
Q  141 tataacaaaagataaaataaa-taaacggttttcatataatctataagttgttttcataagctatc 205  Q
    ||||||||||||||||||||| ||||| || ||||||| | ||||||| |||||| ||||||||||    
T  32066522 tataacaaaagataaaataaattaaaccgtgttcatatgagctataagctgtttttataagctatc 32066457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 49219094 - 49219186
Alignment:
Q  139 tctataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||||||||||| ||||||||||   |||   ||||||||||| ||||||||||||||||||| ||||| |  |||| |||| ||||||||||    
T  49219094 tctataacaaaatataaaataaagtcaaattattttcatataagctataagttgttttcataaactatcttaaagagattatggaaataagct 49219186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 170 - 231
Target Start/End: Original strand, 52735110 - 52735171
Alignment:
Q  170 tttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagctaa 231  Q
    ||||||||||  |||| ||||||||| ||||||||| || ||||||||| ||||||||||||    
T  52735110 tttcatataagttatatgttgttttcgtaagctatcttgaagagcttatggaaataagctaa 52735171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 54325163 - 54325071
Alignment:
Q  128 tataaacaatctctataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttat 218  Q
    ||||||| || ||||| |||||||||||||||||   |||| |||||||||||| ||||||| | |||||| |||||||| || |||| ||||    
T  54325163 tataaactatttctattacaaaagataaaataaagtcaaactgttttcatataagctataagctattttcaaaagctatcatggagagtttat 54325071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 203
Target Start/End: Complemental strand, 55870454 - 55870390
Alignment:
Q  141 tataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagcta 203  Q
    ||||||||||||| |||||||   |||| ||||||| |||| |||||||||||||||||||||||    
T  55870454 tataacaaaagatcaaataaagtcaaactgttttcacataagctataagttgttttcataagcta 55870390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 229
Target Start/End: Complemental strand, 8422950 - 8422862
Alignment:
Q  141 tataacaaaagataaaataaataaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    ||||| |||||||||||||||   |  |||||||||||| |||||||||||||||| || ||||| || |||| ||||  |||||||||    
T  8422950 tataaaaaaagataaaataaagtcattgttttcatataagctataagttgttttcacaatctatcttggagagtttatgcaaataagct 8422862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 25885814 - 25885888
Alignment:
Q  139 tctataacaaaagataaaataaa--taaacggttttcatataatctataagttgttttcataagctatcgtgcag 211  Q
    |||||| ||||||||||||||||  ||||  |||||| | ||| |||||||||||||||||||| |||| |||||    
T  25885814 tctatagcaaaagataaaataaagttaaattgttttcgtgtaagctataagttgttttcataagttatcttgcag 25885888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 231
Target Start/End: Complemental strand, 17822936 - 17822886
Alignment:
Q  181 ctataagttgttttcataagctatcgtgcagagcttatagaaataagctaa 231  Q
    ||||||||||||||||||||||||| || ||| |||||  |||||||||||    
T  17822936 ctataagttgttttcataagctatcttggagaacttatgaaaataagctaa 17822886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 218
Target Start/End: Original strand, 17884023 - 17884104
Alignment:
Q  139 tctataacaaaagataaaataaa--taaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttat 218  Q
    |||||||||||||||||||||||  ||||  |||||  |||||  ||| |||||||||||||||||||  || |||||||||    
T  17884023 tctataacaaaagataaaataaagttaaattgtttttgtataagttatcagttgttttcataagctatattggagagcttat 17884104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 218
Target Start/End: Complemental strand, 47119080 - 47118999
Alignment:
Q  139 tctataacaaaagataaaataaa--taaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttat 218  Q
    |||||| |||||||||||| |||  ||||  |||||||||||| ||||||||||| |||||| |||||| || ||| |||||    
T  47119080 tctatatcaaaagataaaacaaagttaaattgttttcatataagctataagttgtattcatatgctatcttgaagaacttat 47118999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 10192241 - 10192317
Alignment:
Q  141 tataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctatcgtgcagagct 215  Q
    |||||||||||||| ||||||   |||  ||||||||||||  ||||||||||||||| |||||||| || ||||||    
T  10192241 tataacaaaagatagaataaagtcaaattgttttcatataagttataagttgttttcaaaagctatcctggagagct 10192317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 16494882 - 16494841
Alignment:
Q  175 tataatctataagttgttttcataagctatcgtgcagagctt 216  Q
    ||||| ||||||||||||||||||||||||| || |||||||    
T  16494882 tataagctataagttgttttcataagctatcttggagagctt 16494841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 229
Target Start/End: Original strand, 36048519 - 36048580
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||||||||||| ||||||| | |||||| |||||||| |  ||||||||| ||||||||||    
T  36048519 gttttcatataagctataagctattttcaaaagctatcttagagagcttatggaaataagct 36048580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 229
Target Start/End: Complemental strand, 36722753 - 36722692
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    ||||||||||||  ||||||||||||| ||||| |||| || |||||||||  |||||||||    
T  36722753 gttttcatataagttataagttgttttgataagttatcctgaagagcttatgaaaataagct 36722692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 56007679 - 56007724
Alignment:
Q  182 tataagttgttttcataagctatcgtgcagagcttatagaaataag 227  Q
    ||||||||||||| ||||| |||| || ||||||||||||||||||    
T  56007679 tataagttgtttttataagttatcttggagagcttatagaaataag 56007724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 2900327 - 2900387
Alignment:
Q  169 ttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    ||||||||||| ||||||| |||||||| |||||||| |  |||| ||||| |||||||||    
T  2900327 ttttcatataaactataagctgttttcacaagctatcatagagagattataaaaataagct 2900387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 4798633 - 4798589
Alignment:
Q  185 aagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    ||||||||||||||||||||| || |||||||||  |||||||||    
T  4798633 aagttgttttcataagctatcttggagagcttatgcaaataagct 4798589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 205
Target Start/End: Original strand, 9841053 - 9841089
Alignment:
Q  169 ttttcatataatctataagttgttttcataagctatc 205  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  9841053 ttttcatataagctataagatgttttcataagctatc 9841089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 229
Target Start/End: Complemental strand, 24371024 - 24370976
Alignment:
Q  181 ctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    ||||||||||||||||||||||||| |  | || |||||||||||||||    
T  24371024 ctataagttgttttcataagctatcctaaatagtttatagaaataagct 24370976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 3e-17; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 14295461 - 14295553
Alignment:
Q  139 tctataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||||||||||||||||||||||   |||| |||||||||||| ||||||| ||||||| ||||||||| || ||||||| ||||| ||||||    
T  14295461 tctataacaaaagataaaataaagtcaaactgttttcatataagctataagctgttttcgtaagctatcctggagagcttttagaagtaagct 14295553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 37588475 - 37588383
Alignment:
Q  139 tctataacaaaagataaaat-aaat-aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    ||||||| |||||||||||| |||| |||  |||||||||||| |||||||||||||||||||| |||  || ||||||||| ||||||||||    
T  37588475 tctataataaaagataaaatcaaatcaaaaagttttcatataagctataagttgttttcataagttattctggagagcttatggaaataagct 37588383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 218
Target Start/End: Complemental strand, 39257504 - 39257421
Alignment:
Q  136 atctctataacaaaagataaaataaa-taaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttat 218  Q
    |||||||||||||||| ||||||||| | ||   ||||||||||| ||||||||||||||||||||| ||| || |||||||||    
T  39257504 atctctataacaaaaggtaaaataaagtcaaaccttttcatataaactataagttgttttcataagcaatcatggagagcttat 39257421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 139 - 228
Target Start/End: Complemental strand, 12460115 - 12460025
Alignment:
Q  139 tctataacaaaagataaaataaataa-acggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagc 228  Q
    |||||||||||||||||||||| | | |  ||||||| |||| ||||||||||| |||| |||||||| ||||||||||||  ||||||||    
T  12460115 tctataacaaaagataaaataagttatattgttttcaaataaactataagttgtcttcacaagctatcttgcagagcttatgaaaataagc 12460025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 168 - 229
Target Start/End: Complemental strand, 40205156 - 40205097
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||||||||||| |||  |||||||||||||||||||| || ||||||||||||||||||||    
T  40205156 gttttcatataaacta--agttgttttcataagctatcctggagagcttatagaaataagct 40205097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 139 - 224
Target Start/End: Complemental strand, 12595855 - 12595768
Alignment:
Q  139 tctataacaaaagataaaataaa--taaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaat 224  Q
    |||||||||||||||||||||||  ||||  |||||||||||| |||| || || |||||||||||| | |  |||||||||||||||    
T  12595855 tctataacaaaagataaaataaagttaaattgttttcatataaactatgagctggtttcataagctaccttaaagagcttatagaaat 12595768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 17368671 - 17368723
Alignment:
Q  177 taatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    ||||||||||||||||||||||||||||| || |||| |||| ||||||||||    
T  17368671 taatctataagttgttttcataagctatcttggagaggttatggaaataagct 17368723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 37526314 - 37526222
Alignment:
Q  139 tctataacaaaagataaaat-aaat-aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    ||||||| |||||||||||| |||| |||  |||||||||||| |||||||||||||||||||| | |  || ||||||||| ||||||||||    
T  37526314 tctataataaaagataaaatcaaatcaaaaagttttcatataagctataagttgttttcataagttgttctggagagcttatggaaataagct 37526222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 231
Target Start/End: Original strand, 35960359 - 35960462
Alignment:
Q  129 ataaacaatctctataacaaaagataaaataaa-taaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataag 227  Q
    |||||| || ||||||| ||||||||||||||| | ||    |||||||||| |||||||||| |||||||||||||| || | ||| || |||||||||    
T  35960359 ataaactatttctataataaaagataaaataaagtcaaactatttcatataaactataagttgatttcataagctatcctggaaagcgtaaagaaataag 35960458  T
Q  228 ctaa 231  Q
    ||||    
T  35960459 ctaa 35960462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 231
Target Start/End: Original strand, 2568645 - 2568707
Alignment:
Q  169 ttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagctaa 231  Q
    ||||| ||||| ||||||||||||||||||||||||| || |||||| ||  |||||||||||    
T  2568645 ttttcgtataagctataagttgttttcataagctatcatggagagctaatgaaaataagctaa 2568707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 227
Target Start/End: Complemental strand, 26390897 - 26390815
Alignment:
Q  146 caaaagataaaataaat-aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataag 227  Q
    ||||||||||||||| | |||| |||||||||||| ||||||| || |||| |||| |||| || ||||||||| ||||||||    
T  26390897 caaaagataaaataagttaaactgttttcatataagctataagatggtttcctaagttatcctggagagcttatggaaataag 26390815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 229
Target Start/End: Complemental strand, 18543280 - 18543220
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    ||||| ||||||  |||||||||||||||||||||||| || ||||||||| ||||||||||    
T  18543280 gtttttatataagatataagttgttttcataagctatcctggagagcttat-gaaataagct 18543220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 28586881 - 28586789
Alignment:
Q  139 tctataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||||||||||||||||||||||   |||| ||||||||||||  |||||| |||||| |  ||||||| |  ||||||||| ||||||||||    
T  28586881 tctataacaaaagataaaataaagtcaaactgttttcatataaattataagctgttttgacgagctatcctagagagcttatcgaaataagct 28586789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 139 - 233
Target Start/End: Original strand, 34245679 - 34245775
Alignment:
Q  139 tctataacaaaagataaaataaata--aacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagctaaga 233  Q
    |||||||| |||||||||| ||||   ||| ||||| |||||| |||||||||||||| |||||||||| || |||||| ||  |||||||| ||||    
T  34245679 tctataactaaagataaaacaaattccaactgttttaatataagctataagttgtttttataagctatcatggagagctgatgaaaataagccaaga 34245775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 37690752 - 37690659
Alignment:
Q  139 tctataacaaaagataaaat-aaat-aaacggttttcatataatctataagttgttttcat-aagctatcgtgcagagcttatagaaataagct 229  Q
    ||||||| |||||||||||| |||| |||  |||||||||||| ||||||||||||||||| ||| |||  || ||||||||| ||||||||||    
T  37690752 tctataataaaagataaaatcaaatcaaaaagttttcatataagctataagttgttttcataaagttattatggagagcttatggaaataagct 37690659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 170 - 231
Target Start/End: Complemental strand, 41535185 - 41535124
Alignment:
Q  170 tttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagctaa 231  Q
    |||| |||||| |||||| | ||||||||||||||| | ||||||||||| |||||||||||    
T  41535185 tttcgtataatgtataagctattttcataagctatccttcagagcttatataaataagctaa 41535124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 226
Target Start/End: Original strand, 29054896 - 29054952
Alignment:
Q  170 tttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataa 226  Q
    |||||||||| ||||||||||||| ||||| ||||| || ||||||||| |||||||    
T  29054896 tttcatataagctataagttgtttccataaactatcatgtagagcttatggaaataa 29054952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 142 - 226
Target Start/End: Complemental strand, 15003626 - 15003540
Alignment:
Q  142 ataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataa 226  Q
    ||||||||||||||||||||   ||||  | ||||||||| |||||||| ||||||||||||||||    ||||||||| |||||||    
T  15003626 ataacaaaagataaaataaaatcaaactctcttcatataagctataagtggttttcataagctatccaagagagcttatggaaataa 15003540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 169 - 228
Target Start/End: Complemental strand, 32408675 - 32408616
Alignment:
Q  169 ttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagc 228  Q
    ||||||||||| ||||||  | ||||||||||||||| || ||||||||| |||||||||    
T  32408675 ttttcatataagctataaactattttcataagctatcctgaagagcttatggaaataagc 32408616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 204
Target Start/End: Complemental strand, 1244143 - 1244109
Alignment:
Q  170 tttcatataatctataagttgttttcataagctat 204  Q
    |||||||||||||||||||| ||||||||||||||    
T  1244143 tttcatataatctataagttcttttcataagctat 1244109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 205
Target Start/End: Complemental strand, 2569803 - 2569742
Alignment:
Q  146 caaaagataaaataaataaa--cggttttcatataatctataagttgttttcataagctatc 205  Q
    |||||||||||||||||  |  | |||||||||||||||||||| ||||||||||| |||||    
T  2569803 caaaagataaaataaatttattctgttttcatataatctataagctgttttcataaactatc 2569742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 228
Target Start/End: Original strand, 4855655 - 4855744
Alignment:
Q  141 tataacaaaagataaaataaa--taaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagc 228  Q
    |||||||||| ||||||||||  ||||  ||| ||||||||  |||||||||||||||||| |||||    |||||||| ||||||||||    
T  4855655 tataacaaaaaataaaataaagttaaattgttatcatataagttataagttgttttcataaactatcccaaagagcttacagaaataagc 4855744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 161
Target Start/End: Original strand, 6593239 - 6593277
Alignment:
Q  123 ttatttataaacaatctctataacaaaagataaaataaa 161  Q
    |||| |||||||||| |||||||||||||||||||||||    
T  6593239 ttatgtataaacaatttctataacaaaagataaaataaa 6593277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 229
Target Start/End: Complemental strand, 9202856 - 9202771
Alignment:
Q  146 caaaagataaaataaa--taaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    ||||||||||||||||  ||||  |||||||||||| | ||||| |||||||||||| |||| || ||| |||||  |||||||||    
T  9202856 caaaagataaaataaagttaaattgttttcatataagcaataagctgttttcataagttatcttgaagaacttatgaaaataagct 9202771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 12975333 - 12975383
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctatcgtgcagagcttat 218  Q
    |||||||||||| ||||||| ||| ||||||||||||| || |||||||||    
T  12975333 gttttcatataagctataagctgtgttcataagctatcttggagagcttat 12975383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 41016160 - 41016226
Alignment:
Q  163 aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||| |||||||||||| |||||||||||||||| |||| ||| || | |||||||  |||||||||    
T  41016160 aaactgttttcatataagctataagttgttttcacaagccatcatggaaagcttatgaaaataagct 41016226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 229
Target Start/End: Complemental strand, 6587191 - 6587130
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||||| ||||| |||||||||||||||||||||||| ||| ||| ||| |  |||||||||    
T  6587191 gttttcgtataagctataagttgttttcataagctatagtggagaacttgtgaaaataagct 6587130  T

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Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 229
Target Start/End: Original strand, 7319392 - 7319453
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||||||||||| ||||||  ||||||| ||||||||| || ||| |||||| |||||||||    
T  7319392 gttttcatataagctataaactgttttcgtaagctatcttggagaacttataaaaataagct 7319453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 229
Target Start/End: Complemental strand, 10272515 - 10272454
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||||| ||||| ||||||||||||||||||||| ||| || |||| ||||  |||||||||    
T  10272515 gttttcgtataagctataagttgttttcataagccatcttggagagtttatgaaaataagct 10272454  T

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Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 30217077 - 30217126
Alignment:
Q  177 taatctataagttgttttcataagctatcgtgcagagcttatagaaataa 226  Q
    ||||||||||| || |||||||||||||| || ||||||||| |||||||    
T  30217077 taatctataagctgctttcataagctatcctggagagcttatggaaataa 30217126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 229
Target Start/End: Original strand, 32172639 - 32172700
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||| ||||||| ||||||| ||||||||||||||||| || ||| || || ||||||||||    
T  32172639 gtttacatataagctataagctgttttcataagctatcatgaagaactaatggaaataagct 32172700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 34117615 - 34117570
Alignment:
Q  173 catataatctataagttgttttcataagctatcgtgcagagcttat 218  Q
    ||||||| |||||||||| |||||||||||||| || |||||||||    
T  34117615 catataagctataagttgctttcataagctatcttggagagcttat 34117570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 231
Target Start/End: Original strand, 17777910 - 17777958
Alignment:
Q  183 ataagttgttttcataagctatcgtgcagagcttatagaaataagctaa 231  Q
    |||||||||||||||||| |||| || ||||||||| ||||||| ||||    
T  17777910 ataagttgttttcataagttatcctggagagcttatcgaaataaactaa 17777958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 204
Target Start/End: Complemental strand, 19138803 - 19138767
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctat 204  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  19138803 gttttcagataagctataagttgttttcataagctat 19138767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 205
Target Start/End: Original strand, 34205226 - 34205262
Alignment:
Q  169 ttttcatataatctataagttgttttcataagctatc 205  Q
    |||| |||||| |||||||||||||||||||||||||    
T  34205226 tttttatataagctataagttgttttcataagctatc 34205262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 205
Target Start/End: Complemental strand, 41277456 - 41277397
Alignment:
Q  148 aaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctatc 205  Q
    ||||||||||||||   |||| ||||||||||||  || |||||||||||||||||||||    
T  41277456 aaagataaaataaagtcaaactgttttcatataagttaaaagttgttttcataagctatc 41277397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 229
Target Start/End: Complemental strand, 47904146 - 47904086
Alignment:
Q  169 ttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||  ||||||||||    
T  47904146 ttttcatataatctataagtggttttcataagctatcgtgaagagcttacggaaataagct 47904086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 169 - 230
Target Start/End: Complemental strand, 51510276 - 51510215
Alignment:
Q  169 ttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagcta 230  Q
    |||| |||||| |||||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  51510276 ttttgatataaactataagttgttttcataagttatcgtggagagcttatggaaataagcta 51510215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 10101591 - 10101502
Alignment:
Q  139 tctataacaaaagataaaataaa--taaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataa 226  Q
    |||||||||||||||||||||||  ||||  ||||||||||||  || |||||||||||||||||  || |  |||||||||||||||||    
T  10101591 tctataacaaaagataaaataaagttaaattgttttcatataagataaaagttgttttcataagccctcttagagagcttatagaaataa 10101502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 10212516 - 10212427
Alignment:
Q  139 tctataacaaaagataaaataaa--taaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataa 226  Q
    |||||||||||||||||||||||  ||||  ||||||||||||  || |||||||||||||||||  || |  |||||||||||||||||    
T  10212516 tctataacaaaagataaaataaagttaaattgttttcatataagataaaagttgttttcataagccctcttagagagcttatagaaataa 10212427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 168 - 230
Target Start/End: Complemental strand, 19679844 - 19679782
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagcta 230  Q
    |||||||||||| ||||| ||||||||||||| ||||| ||| ||||| ||||||||||||||    
T  19679844 gttttcatataagctataggttgttttcataaactatcatgccgagctgatagaaataagcta 19679782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 229
Target Start/End: Complemental strand, 14548805 - 14548744
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||||||||||| |||||||||||||||||||| |||  || ||||||||| ||||||||||    
T  14548805 gttttcatataagctataagttgttttcataagttattctggagagcttatggaaataagct 14548744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 24887398 - 24887306
Alignment:
Q  139 tctataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||||||||| ||||||||||||   |||| || ||||||||| ||| ||| ||||||||||||||||| || ||||||||| | ||||||||    
T  24887398 tctataacaatagataaaataaagtcaaactgtattcatataagctaaaagctgttttcataagctatcctggagagcttatgggaataagct 24887306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 27792859 - 27792919
Alignment:
Q  169 ttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    ||||||||||| ||  ||||||||||||||| ||||| || ||||||||||||||||||||    
T  27792859 ttttcatataagctgcaagttgttttcataaactatcatgtagagcttatagaaataagct 27792919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 136 - 229
Target Start/End: Original strand, 28306110 - 28306205
Alignment:
Q  136 atctctataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||||||||||||||  |||||||||   |||| ||||||||||||  || ||||||||||||||||||||   | |||||||| |||||||||||    
T  28306110 atctctataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataagctatacagaagagcttacagaaataagct 28306205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 43875629 - 43875685
Alignment:
Q  163 aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttata 219  Q
    |||| ||| |||||||| ||||||||||||||||||||||||| || ||||||||||    
T  43875629 aaactgttctcatataagctataagttgttttcataagctatcatggagagcttata 43875685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 229
Target Start/End: Original strand, 2318630 - 2318692
Alignment:
Q  168 gttttcatataatctataagttgttttcataagcta-tcgtgcagagcttatagaaataagct 229  Q
    |||||||||||| |||||||||||||| ||||| || || || ||||||||||||||||||||    
T  2318630 gttttcatataaactataagttgtttttataagttattcttggagagcttatagaaataagct 2318692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 227
Target Start/End: Complemental strand, 36646497 - 36646407
Alignment:
Q  139 tctataacaaaagataaaataaa-ta-aacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataag 227  Q
    ||||| ||||||||||||||||| || ||  ||||||||||||  ||||| |||||||||||||||||| |  |||| |||||||||||||    
T  36646497 tctatgacaaaagataaaataaagtataattgttttcatataagttataacttgttttcataagctatcctagagagtttatagaaataag 36646407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 229
Target Start/End: Complemental strand, 42734014 - 42733960
Alignment:
Q  175 tataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    ||||| ||||||||||||||||  |||||||||| ||||||||| ||||||||||    
T  42734014 tataagctataagttgttttcaccagctatcgtggagagcttatggaaataagct 42733960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 229
Target Start/End: Original strand, 21367653 - 21367714
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||||| |||||| |||||||||||||||||||||||| || ||| |||||  |||||||||    
T  21367653 gttttcgtataatgtataagttgttttcataagctatcttggagaacttatgaaaataagct 21367714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 205
Target Start/End: Complemental strand, 22214743 - 22214706
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctatc 205  Q
    |||||||||||| |||||||||||||||||||||||||    
T  22214743 gttttcatataacctataagttgttttcataagctatc 22214706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 38462220 - 38462304
Alignment:
Q  123 ttatttataaacaatctctataacaaaagataaaataaa--taaacggttttcatataatctataagttgttttcataagctatc 205  Q
    |||||||||| | || |||||| ||||||||||||||||   |||| |||||||||||  ||||||  |||||||||||||||||    
T  38462220 ttatttataagctatttctataccaaaagataaaataaagtcaaactgttttcatatatgctataaactgttttcataagctatc 38462304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 139 - 202
Target Start/End: Complemental strand, 43116543 - 43116478
Alignment:
Q  139 tctataacaaaagataaaat-aaat-aaacggttttcatataatctataagttgttttcataagct 202  Q
    |||||||||||||||||||| |||| ||||  ||||||||||| |||||||| |||||||||||||    
T  43116543 tctataacaaaagataaaatcaaatcaaacaattttcatataagctataagtcgttttcataagct 43116478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 194
Target Start/End: Complemental strand, 20192719 - 20192664
Alignment:
Q  141 tataacaaaagataaaataaat--aaacggttttcatataatctataagttgtttt 194  Q
    |||||||||||||||||||||   |||| |||||||||||||||||||| ||||||    
T  20192719 tataacaaaagataaaataaagtcaaacagttttcatataatctataagctgtttt 20192664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 223
Target Start/End: Complemental strand, 33965604 - 33965518
Alignment:
Q  141 tataacaaaagataaaataaat--aaacggttttcatataat--ctataagttgttttcataagctatcgtgcagagcttatagaaa 223  Q
    ||||||||||| |||||||||   |||| ||||||||||||   ||||||| ||||||||||||||||| || ||||||||| ||||    
T  33965604 tataacaaaaggtaaaataaagtcaaactgttttcatataaaagctataagatgttttcataagctatcttgaagagcttatggaaa 33965518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 204
Target Start/End: Original strand, 41057024 - 41057060
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctat 204  Q
    |||||||||||| ||||||||||||||||||||||||    
T  41057024 gttttcatataagctataagttgttttcataagctat 41057060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 229
Target Start/End: Complemental strand, 44284143 - 44284103
Alignment:
Q  189 tgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    ||||||||||||||||| || ||||||||||||||||||||    
T  44284143 tgttttcataagctatcctggagagcttatagaaataagct 44284103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 141 - 229
Target Start/End: Original strand, 1816540 - 1816630
Alignment:
Q  141 tataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    ||||| |||||||||||||||   |||| |||||  |||||  |||||||||||||||||||||||  || |||||||||  |||||||||    
T  1816540 tataataaaagataaaataaagtcaaactgtttttgtataagatataagttgttttcataagctatactggagagcttatcaaaataagct 1816630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 163 - 218
Target Start/End: Complemental strand, 20502157 - 20502102
Alignment:
Q  163 aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttat 218  Q
    |||| |||||||||||  ||||||| ||||||||||||||||| || |||||||||    
T  20502157 aaactgttttcatatacgctataagctgttttcataagctatcctgaagagcttat 20502102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 128 - 205
Target Start/End: Complemental strand, 20874430 - 20874351
Alignment:
Q  128 tataaacaatctctataacaaaagataaaata-aata-aacggttttcatataatctataagttgttttcataagctatc 205  Q
    ||||||| || ||||| ||||||| ||||||| |||| ||  |||||||||||| ||||||| |||||||||||||||||    
T  20874430 tataaactatttctatgacaaaagctaaaatacaatataattgttttcatataaactataagctgttttcataagctatc 20874351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 175 - 218
Target Start/End: Original strand, 22203423 - 22203466
Alignment:
Q  175 tataatctataagttgttttcataagctatcgtgcagagcttat 218  Q
    ||||||||||||||||||||||||||||||| || ||| |||||    
T  22203423 tataatctataagttgttttcataagctatcttggagaacttat 22203466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 169 - 204
Target Start/End: Original strand, 37788847 - 37788882
Alignment:
Q  169 ttttcatataatctataagttgttttcataagctat 204  Q
    ||||| ||||||||||||||||||||||||||||||    
T  37788847 ttttcgtataatctataagttgttttcataagctat 37788882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 203
Target Start/End: Complemental strand, 31337519 - 31337450
Alignment:
Q  136 atctctataacaaaagataaaataaa--taaacggttttcatataatctataagttgttttcataagcta 203  Q
    ||||||| ||||||||||||||||||   |||| ||||| ||||||  |||||||||| |||||||||||    
T  31337519 atctctaaaacaaaagataaaataaagtcaaactgtttttatataagttataagttgtattcataagcta 31337450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 33405251 - 33405201
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctatcgtgcagagcttat 218  Q
    |||||||||||| ||||||| ||||||||||||||||| || ||| |||||    
T  33405251 gttttcatataagctataagctgttttcataagctatcttgaagaacttat 33405201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 205
Target Start/End: Complemental strand, 40122864 - 40122800
Alignment:
Q  142 ataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctatc 205  Q
    ||||||||||||||||||||   |||| ||||||||| || |||||||||||||| ||||||||||    
T  40122864 ataacaaaagataaaataaagtcaaactgttttcata-aagctataagttgtttttataagctatc 40122800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 229
Target Start/End: Original strand, 44295522 - 44295576
Alignment:
Q  175 tataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||||||||||||||||||||||||| |||   | ||||||||| ||||||||||    
T  44295522 tataatctataagttgttttcataagatatatcggagagcttatggaaataagct 44295576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 201
Target Start/End: Original strand, 2863780 - 2863833
Alignment:
Q  148 aaagataaaataaataaacggttttcatataatctataagttgttttcataagc 201  Q
    |||||||||||||| |||| |||||| ||||| ||||||| | |||||||||||    
T  2863780 aaagataaaataaagaaactgttttcctataagctataagctattttcataagc 2863833  T

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Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 21865533 - 21865598
Alignment:
Q  139 tctataacaaaagataaaataaataaacggttttcatataatctataagttgttttcataagctat 204  Q
    ||||||||||||||||||| ||    |  |||||||||||| |||||||||||||| |||||||||    
T  21865533 tctataacaaaagataaaacaaggtcaatgttttcatataagctataagttgttttgataagctat 21865598  T

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Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 45433054 - 45432962
Alignment:
Q  139 tctataacaaaagataaaataaa--taaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    ||||||| |||||||||||| ||  ||||  |||||||||| | |||||| ||||||||| |||  ||| || ||||||||| ||||||||||    
T  45433054 tctataagaaaagataaaatgaagttaaattgttttcatatgagctataaattgttttcacaagtcatcctgtagagcttatggaaataagct 45432962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 229
Target Start/End: Complemental strand, 48286894 - 48286833
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||| |||||||  |||||  |||||||||||| |||| || ||||||||||||||||||||    
T  48286894 gtttccatataagttataaactgttttcataagttatcatgtagagcttatagaaataagct 48286833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 229
Target Start/End: Complemental strand, 1125849 - 1125789
Alignment:
Q  169 ttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    ||||||||||| |||||| |||||||| |||| |||| || ||||||||| ||| ||||||    
T  1125849 ttttcatataagctataacttgttttcttaagttatcttggagagcttatggaagtaagct 1125789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 205
Target Start/End: Complemental strand, 21872354 - 21872318
Alignment:
Q  169 ttttcatataatctataagttgttttcataagctatc 205  Q
    |||| |||||| |||||||||||||||||||||||||    
T  21872354 ttttgatataagctataagttgttttcataagctatc 21872318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 24158572 - 24158528
Alignment:
Q  183 ataagttgttttcataagctatcgtgcagagcttatagaaataag 227  Q
    ||||| ||||||||||||||||| || ||||||||| ||||||||    
T  24158572 ataagctgttttcataagctatcctggagagcttatggaaataag 24158528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 24785198 - 24785254
Alignment:
Q  175 tataatctataagttgttttcataagctatcgtgcagagcttatagaaataagctaa 231  Q
    ||||||||||||  ||||||||||||||||| |  |||||||||  |||||||||||    
T  24785198 tataatctataacgtgttttcataagctatcctcgagagcttatgtaaataagctaa 24785254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 205
Target Start/End: Complemental strand, 25183114 - 25183035
Alignment:
Q  128 tataaacaatctctataacaaaagataaaataaa--taaacggttttcatataatctataagttgttttcataagctatc 205  Q
    ||||||| || | ||||||||||||| |||||||  ||| |  ||||||||| | ||||||| |||||||||||||||||    
T  25183114 tataaactatttttataacaaaagattaaataaagttaagctattttcatatgagctataagctgttttcataagctatc 25183035  T

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Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 227
Target Start/End: Original strand, 26603182 - 26603238
Alignment:
Q  171 ttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataag 227  Q
    |||||||  ||||||| |||||| ||||||||||| |||| ||||||| ||||||||    
T  26603182 ttcatattctctataacttgtttgcataagctatcctgcaaagcttatggaaataag 26603238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 229
Target Start/End: Complemental strand, 27290984 - 27290924
Alignment:
Q  169 ttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    ||||||||||||||| ||| ||||| ||| ||||||| ||||||| | || ||||||||||    
T  27290984 ttttcatataatctaaaagctgtttgcattagctatcctgcagagttcatggaaataagct 27290924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 204
Target Start/End: Complemental strand, 36783449 - 36783382
Alignment:
Q  139 tctataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctat 204  Q
    |||||| ||||||||||||||||   |||  |||||||||||| |||| || ||||||||||||||||    
T  36783449 tctataccaaaagataaaataaagtaaaattgttttcatataaactattagctgttttcataagctat 36783382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 5e-16; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 44241815 - 44241906
Alignment:
Q  139 tctataacaaaagataaaataaa-taaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||||||||| |||||||||||| | |||  ||||  ||||| ||||||||||||||||||||||||| || | ||||||||||||||||||    
T  44241815 tctataacaacagataaaataaagttaactatttttgtataacctataagttgttttcataagctatcttgaatagcttatagaaataagct 44241906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 139 - 202
Target Start/End: Complemental strand, 9527205 - 9527140
Alignment:
Q  139 tctataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagct 202  Q
    |||||||||||||||| ||||||   |||| |||||||||||| ||||||||||||||||||||||    
T  9527205 tctataacaaaagatataataaagtcaaactgttttcatataaactataagttgttttcataagct 9527140  T

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Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 142 - 229
Target Start/End: Complemental strand, 44151592 - 44151503
Alignment:
Q  142 ataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    ||||||||||||| ||||||   |||| |||| ||||||| ||||||||||||||||||| ||||| || | ||||||| ||||||||||    
T  44151592 ataacaaaagatagaataaagtaaaactgtttccatataagctataagttgttttcataaactatcttgaaaagcttatggaaataagct 44151503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 11208404 - 11208472
Alignment:
Q  139 tctataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctatc 205  Q
    |||| ||||||||||||||||||   |||| |||||||||||| ||||| |||||||||||||||||||    
T  11208404 tctacaacaaaagataaaataaactcaaaccgttttcatataaactatatgttgttttcataagctatc 11208472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 17989136 - 17989057
Alignment:
Q  141 tataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttat 218  Q
    |||||||||| ||||||||||   |||| |||||||||||| |||||| ||||||||||||||| || || |||||||||    
T  17989136 tataacaaaatataaaataaagtcaaactgttttcatataaactataatttgttttcataagctctcctgaagagcttat 17989057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 203
Target Start/End: Original strand, 1417203 - 1417285
Alignment:
Q  123 ttatttataaacaatctctataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagcta 203  Q
    |||| ||||||| || | |||||||||||||||||||||   |||  |||||||||||| | |||||||||||||||||||||    
T  1417203 ttatgtataaactatttatataacaaaagataaaataaagtcaaattgttttcatataagcaataagttgttttcataagcta 1417285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 196
Target Start/End: Complemental strand, 45813311 - 45813236
Alignment:
Q  123 ttatttataaacaatctctataacaaaagataaaataaa-taaacg-gttttcatataatctataagttgttttca 196  Q
    |||||||||| | || |||||| |||||||||||||||| | |||  |||||||||||||||||||||||||||||    
T  45813311 ttatttataagctatttctataccaaaagataaaataaagtcaacttgttttcatataatctataagttgttttca 45813236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 203
Target Start/End: Complemental strand, 5006623 - 5006558
Alignment:
Q  140 ctataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagcta 203  Q
    ||||||||||||||||||||||   |||| ||||||||||||  ||||| ||||||||||||||||    
T  5006623 ctataacaaaagataaaataaagtcaaactgttttcatataaggtataaattgttttcataagcta 5006558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 36370635 - 36370713
Alignment:
Q  149 aagataaaataaat-aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataa 226  Q
    |||||||||||| | |||| ||||||| |||| ||||||||||||| ||||| ||||| || ||||||||| |||||||    
T  36370635 aagataaaataagttaaactgttttcacataagctataagttgtttccataaactatcctgaagagcttatggaaataa 36370713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 3610855 - 3610763
Alignment:
Q  139 tctataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||| ||||||||||||||| ||   |||| |||||  ||||| ||||||||||||||| ||| ||||| |  ||||||||||||||||||||    
T  3610855 tctacaacaaaagataaaatgaaggcaaactgttttggtataagctataagttgttttcgtaaactatcctagagagcttatagaaataagct 3610763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 226
Target Start/End: Original strand, 22759143 - 22759230
Alignment:
Q  141 tataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataa 226  Q
    |||||||||||||||||||||   |||  |||||||||||| ||| ||| || ||||||||||||||  | ||||||||| |||||||    
T  22759143 tataacaaaagataaaataaaggaaaattgttttcatataagctaaaagctgatttcataagctatccaggagagcttatggaaataa 22759230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 24895343 - 24895399
Alignment:
Q  169 ttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaata 225  Q
    ||||||||||| |||||||||||||||| ||| ||| ||| ||||||||| ||||||    
T  24895343 ttttcatataagctataagttgttttcacaagatattgtggagagcttatggaaata 24895399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 24909651 - 24909707
Alignment:
Q  169 ttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaata 225  Q
    ||||||||||| |||||||||||||||||||| ||| ||| ||||||| | ||||||    
T  24909651 ttttcatataagctataagttgttttcataagatattgtggagagcttgtggaaata 24909707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 36484118 - 36484062
Alignment:
Q  169 ttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaata 225  Q
    ||||| || ||||||||||||||||||| ||| |||| || ||||||||||||||||    
T  36484118 ttttcgtagaatctataagttgttttcacaagttatcctgaagagcttatagaaata 36484062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 182 - 229
Target Start/End: Complemental strand, 24363671 - 24363624
Alignment:
Q  182 tataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||||||||||||||||||||||| || |||| |||| ||||||||||    
T  24363671 tataagttgttttcataagctatcctggagaggttatggaaataagct 24363624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 163 - 226
Target Start/End: Complemental strand, 27481383 - 27481320
Alignment:
Q  163 aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataa 226  Q
    |||| |||| ||||||| ||||||||| ||||||||||||||| || | ||||||| |||||||    
T  27481383 aaactgtttccatataagctataagttattttcataagctatcatggatagcttatggaaataa 27481320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 168 - 231
Target Start/End: Original strand, 38010700 - 38010763
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagctaa 231  Q
    |||||||||||| ||||||| ||||||||||| ||||| |  ||| ||||| ||||||||||||    
T  38010700 gttttcatataagctataagctgttttcataatctatcctagagaacttatggaaataagctaa 38010763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 40439040 - 40439099
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataag 227  Q
    |||||||||||   |||||||||||||||| ||||||| || ||||||||| ||||||||    
T  40439040 gttttcatatatgttataagttgttttcattagctatcctgaagagcttatggaaataag 40439099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 45777284 - 45777218
Alignment:
Q  141 tataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctatc 205  Q
    |||||||||||||||||| ||   |||| |||||||||||| ||||||||||||||| || ||||||    
T  45777284 tataacaaaagataaaattaagtcaaactgttttcatataaactataagttgttttcgtaggctatc 45777218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 218
Target Start/End: Complemental strand, 30456565 - 30456484
Alignment:
Q  139 tctataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttat 218  Q
    |||| ||||||||||||||||||   |||  ||||||||||||  ||||||| |||||||||| ||||| || |||||||||    
T  30456565 tctaaaacaaaagataaaataaagtcaaattgttttcatataagttataagtggttttcataaactatcttggagagcttat 30456484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 231
Target Start/End: Complemental strand, 46056081 - 46056031
Alignment:
Q  181 ctataagttgttttcataagctatcgtgcagagcttatagaaataagctaa 231  Q
    |||||| ||||||||||||||||||  | ||||||||| ||||||||||||    
T  46056081 ctataaattgttttcataagctatcccgtagagcttatggaaataagctaa 46056031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 229
Target Start/End: Complemental strand, 46104644 - 46104590
Alignment:
Q  175 tataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    ||||| ||||||||||||||||||||||||  || |||||||||  |||||||||    
T  46104644 tataagctataagttgttttcataagctatgctgaagagcttatgaaaataagct 46104590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 46104696 - 46104646
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctatcgtgcagagcttat 218  Q
    |||||||||||| |||||||||||||||| ||| |||| || |||||||||    
T  46104696 gttttcatataagctataagttgttttcaaaagatatcttgaagagcttat 46104646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 1350325 - 1350276
Alignment:
Q  169 ttttcatataatctataagttgttttcataagctatcgtgcagagcttat 218  Q
    |||||| |||||||||||| ||||||||||| ||||| || |||||||||    
T  1350325 ttttcacataatctataagctgttttcataaactatcctgaagagcttat 1350276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 229
Target Start/End: Original strand, 3559021 - 3559082
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||| |||||||||||||||  |||||||| | ||||| || | ||||||||||||||||||    
T  3559021 gtttacatataatctataagccgttttcattaactatcttgtatagcttatagaaataagct 3559082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 229
Target Start/End: Original strand, 21185075 - 21185135
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||||||||||||||||||| ||||| |||||| |||  || ||||||||| ||||||||||    
T  21185075 gttttcatataatctataagctgtttccataagatat-ttgaagagcttattgaaataagct 21185135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 25558274 - 25558225
Alignment:
Q  169 ttttcatataatctataagttgttttcataagctatcgtgcagagcttat 218  Q
    ||||||||||| |||||||||||||||||||| |||| | || |||||||    
T  25558274 ttttcatataagctataagttgttttcataagttatcctacaaagcttat 25558225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 25558472 - 25558423
Alignment:
Q  169 ttttcatataatctataagttgttttcataagctatcgtgcagagcttat 218  Q
    ||||||||||| |||||||||||||||||||| |||| | || |||||||    
T  25558472 ttttcatataagctataagttgttttcataagttatcctacaaagcttat 25558423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 33346806 - 33346851
Alignment:
Q  181 ctataagttgttttcataagctatcgtgcagagcttatagaaataa 226  Q
    |||||||||| | |||||||||||| || |||||||||||||||||    
T  33346806 ctataagttgatctcataagctatcttggagagcttatagaaataa 33346851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 40689101 - 40689033
Alignment:
Q  139 tctataacaaaagataaaataaa--taaacggttttcatataatctataagttgttttcataagctatc 205  Q
    |||||| ||||||||||||||||  ||||   ||||||||||| ||||||| ||| |||||||||||||    
T  40689101 tctatagcaaaagataaaataaagttaaattattttcatataagctataagctgtgttcataagctatc 40689033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 229
Target Start/End: Complemental strand, 48917414 - 48917369
Alignment:
Q  184 taagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||||||||||||||||||||| || |||||||||  |||||||||    
T  48917414 taagttgttttcataagctatcttggagagcttatgaaaataagct 48917369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 205
Target Start/End: Complemental strand, 1358280 - 1358244
Alignment:
Q  169 ttttcatataatctataagttgttttcataagctatc 205  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  1358280 ttttcatataatctataagctgttttcataaactatc 1358244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 226
Target Start/End: Original strand, 4966116 - 4966200
Alignment:
Q  144 aacaaaagataaaataa-at-aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataa 226  Q
    |||||| |||||||||| || |||| |||||||||| |  |||||| ||||||||||||| ||| || ||||||||| |||||||    
T  4966116 aacaaaggataaaataatatcaaacagttttcatattaggtataagctgttttcataagccatcctgaagagcttatggaaataa 4966200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 6263448 - 6263384
Alignment:
Q  167 ggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagctaa 231  Q
    |||||||||||||  |||||| || |||||||||||||  || ||||| ||| ||||||||||||    
T  6263448 ggttttcatataagttataagctgatttcataagctattatggagagcatatggaaataagctaa 6263384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 194
Target Start/End: Original strand, 33894578 - 33894634
Alignment:
Q  139 tctataacaaaagataaaataaat-aaacggttttcatataatctataagttgtttt 194  Q
    |||||||||||||||||||||| | |||| |||||||||||| || || ||||||||    
T  33894578 tctataacaaaagataaaataagtcaaactgttttcatataagctttatgttgtttt 33894634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 46825053 - 46825148
Alignment:
Q  139 tctataacaaaagataaaataaa--taaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttat-agaaataagctaa 231  Q
    ||||||| |||||||||||||||   |||  |||||||||||| | ||||   |||||||||||||||| || || |||||| |||||||||||||    
T  46825053 tctataaaaaaagataaaataaagtcaaattgttttcatataagccataaaccgttttcataagctatcttggagtgcttatgagaaataagctaa 46825148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 168 - 229
Target Start/End: Complemental strand, 25005881 - 25005820
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||||||||||| ||||||||||||||||||||||||| || |||||||||| ||| |||||    
T  25005881 gttttcatataagctataagttgttttcataagctatcctggagagcttataaaaacaagct 25005820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 229
Target Start/End: Original strand, 7472250 - 7472358
Alignment:
Q  122 attatttataaacaatctctataacaaaagataaaataaat-aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatag 220  Q
    ||||||||||| | || |||||||||||||||| ||||| | |||  |||||  ||||||||||||| ||||| ||||||||||| || |||||||||      
T  7472250 attatttataagctatttctataacaaaagatataataagttaaattgtttttgtataatctataagctgtttccataagctatcttggagagcttatga 7472349  T
Q  221 aaataagct 229  Q
    |||||||||    
T  7472350 aaataagct 7472358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 229
Target Start/End: Complemental strand, 28689581 - 28689475
Alignment:
Q  127 ttataaacaatctctataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttc--ataagctatcgtgcagagcttatagaa 222  Q
    |||||||| || |||||| |||||||||||||||||  ||  ||||||||||||| |||||||||||||||  |||||||||| || | |||||||  ||    
T  28689581 ttataaactatttctatatcaaaagataaaataaatgcaagtggttttcatataagctataagttgttttcatataagctatcttggaaagcttatgaaa 28689482  T
Q  223 ataagct 229  Q
    |||||||    
T  28689481 ataagct 28689475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 229
Target Start/End: Original strand, 30257646 - 30257730
Alignment:
Q  147 aaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||||||||||||||   |||| |||| ||||||| || |||||||||||||||| ||||| || || |||||||||||||||||    
T  30257646 aaaagataaaataaagtcaaactgtttccatataagctttaagttgttttcataaactatcctggagggcttatagaaataagct 30257730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 37842470 - 37842378
Alignment:
Q  139 tctataacaaaagataaaataaa--taaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||||| |||||||| |||||||  ||||| || |||  |||| ||||||||||||||||||||||||| || ||| |||||| |||||||||    
T  37842470 tctatagcaaaagatgaaataaagttaaactgtgttcgaataagctataagttgttttcataagctatcttgaagaacttataaaaataagct 37842378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 205
Target Start/End: Complemental strand, 4078232 - 4078196
Alignment:
Q  169 ttttcatataatctataagttgttttcataagctatc 205  Q
    |||||||||||||||||||||||||||||||||||||    
T  4078232 ttttcatataatctataagttgttttcataagctatc 4078196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 169 - 229
Target Start/End: Complemental strand, 6231899 - 6231839
Alignment:
Q  169 ttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    ||||||||||||||||||| ||||||| ||||||| | || ||| ||||||||||||||||    
T  6231899 ttttcatataatctataagctgttttcgtaagctaacctgaagaacttatagaaataagct 6231839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 27738295 - 27738201
Alignment:
Q  139 tctataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagctaa 231  Q
    |||| ||||||||||||||||||   |||  |||||||||||| |||||| |||||||||||||||||   | ||||||||| || |||||||||    
T  27738295 tctacaacaaaagataaaataaagtcaaattgttttcatataagctataatttgttttcataagctatacaggagagcttatggatataagctaa 27738201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 141 - 229
Target Start/End: Original strand, 30371105 - 30371195
Alignment:
Q  141 tataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||||||||||||||||||||   |||  |||||||||||| ||||||||||||||||||||  ||  || ||||| ||| ||||||||||    
T  30371105 tataacaaaagataaaataaactcaaattgttttcatataagctataagttgttttcataagacattttggagagcgtattgaaataagct 30371195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 205
Target Start/End: Complemental strand, 12564963 - 12564921
Alignment:
Q  163 aaacggttttcatataatctataagttgttttcataagctatc 205  Q
    |||| |||||||||||| |||||||||||||||||||||||||    
T  12564963 aaactgttttcatataagctataagttgttttcataagctatc 12564921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 229
Target Start/End: Complemental strand, 14630093 - 14629989
Alignment:
Q  129 ataaacaatctctataacaaaagataaaataaa--taaacggttttc--atataatctataagttgttttcataagctatcgtgcagagcttatagaaat 224  Q
    |||||| ||||||||||||||||||||||||||  || || |||| |  |||||| ||||||| | ||||||||||||||| || |||  |||| |||||    
T  14630093 ataaactatctctataacaaaagataaaataaagttacactgtttacatatataagctataagctattttcataagctatcttggagactttatggaaat 14629994  T
Q  225 aagct 229  Q
    |||||    
T  14629993 aagct 14629989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 25006118 - 25006068
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctatcgtgcagagcttat 218  Q
    |||||||||||| ||||||||||||||||||||||||| || ||| |||||    
T  25006118 gttttcatataagctataagttgttttcataagctatcttggagatcttat 25006068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 27887197 - 27887139
Alignment:
Q  173 catataatctataagttgttttcataagctatcgtgcagagcttatagaaataagctaa 231  Q
    ||||||| ||||||||||||||||||| ||||| || ||||| |||| |||||||||||    
T  27887197 catataagctataagttgttttcataaactatcatggagagcatataaaaataagctaa 27887139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 139 - 217
Target Start/End: Complemental strand, 5756801 - 5756721
Alignment:
Q  139 tctataacaaaagataaaataaa--taaacggttttcatataatctataagttgttttcataagctatcgtgcagagctta 217  Q
    ||||||||||||||| | |||||  ||||| ||||||||||||  |||||||||||||| ||||||| | || ||||||||    
T  5756801 tctataacaaaagatgatataaagttaaactgttttcatataaattataagttgttttcgtaagctagcctggagagctta 5756721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 139 - 217
Target Start/End: Original strand, 6074429 - 6074509
Alignment:
Q  139 tctataacaaaagataaaataaa--taaacggttttcatataatctataagttgttttcataagctatcgtgcagagctta 217  Q
    ||||||||||||||| | |||||  ||||| |||||||||||| |||| |||||||||| ||||||| | || ||||||||    
T  6074429 tctataacaaaagatgatataaagttaaactgttttcatataagctatgagttgttttcttaagctagcctgaagagctta 6074509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 217
Target Start/End: Original strand, 17269236 - 17269285
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctatcgtgcagagctta 217  Q
    |||||||||||| | ||||||||||||||||||||||| || ||||||||    
T  17269236 gttttcatataagcaataagttgttttcataagctatcctggagagctta 17269285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 170 - 223
Target Start/End: Complemental strand, 17423020 - 17422967
Alignment:
Q  170 tttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaa 223  Q
    |||||||||| |||||||||||||||||| |||||| || |||| |||||||||    
T  17423020 tttcatataagctataagttgttttcatatgctatcatggagaggttatagaaa 17422967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 33527262 - 33527194
Alignment:
Q  139 tctataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctatc 205  Q
    |||| |||||||||||||||| |   |||| |||||||||||||||||||| |||||||||||| ||||    
T  33527262 tctaaaacaaaagataaaatacagtcaaactgttttcatataatctataagctgttttcataagttatc 33527194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 229
Target Start/End: Complemental strand, 39348047 - 39347990
Alignment:
Q  172 tcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    ||||| || ||||||||||||||||||| ||||| |||| ||||||| ||||||||||    
T  39348047 tcatacaagctataagttgttttcataaactatcctgcaaagcttatggaaataagct 39347990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 229
Target Start/End: Complemental strand, 23902150 - 23902090
Alignment:
Q  169 ttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    ||||||||||| |||||||||||||||| |||||||| |  ||||||||| ||| ||||||    
T  23902150 ttttcatataagctataagttgttttcaaaagctatcttagagagcttatggaagtaagct 23902090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 232
Target Start/End: Complemental strand, 38651495 - 38651451
Alignment:
Q  188 ttgttttcataagctatcgtgcagagcttatagaaataagctaag 232  Q
    |||||||||||||||||| || |||||||||| ||||||||||||    
T  38651495 ttgttttcataagctatcctggagagcttataaaaataagctaag 38651451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 229
Target Start/End: Original strand, 44940300 - 44940388
Alignment:
Q  141 tataacaaaagataaaataaataaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||| ||||||||||||||||   || ||||||| ||||  |||||||||||||||||| ||||| || |||| || | ||||||||||    
T  44940300 tatagcaaaagataaaataaagtcactgttttcaaataagttataagttgttttcataatctatcctgaagaggttgtggaaataagct 44940388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 4622048 - 4622142
Alignment:
Q  139 tctataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagctaa 231  Q
    ||||||||||||||| |||| |||  ||||  ||||||||||| ||||||| ||||| |||| |||||| || ||||||| |  |||||||||||    
T  4622048 tctataacaaaagatcaaatgaattcaaactcttttcatataagctataagctgtttccatatgctatcttggagagcttgtgaaaataagctaa 4622142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 188 - 227
Target Start/End: Original strand, 5150943 - 5150982
Alignment:
Q  188 ttgttttcataagctatcgtgcagagcttatagaaataag 227  Q
    |||||||||||||||||| || ||||||||||||||||||    
T  5150943 ttgttttcataagctatcatgaagagcttatagaaataag 5150982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 7218158 - 7218099
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataag 227  Q
    |||||||||||| ||||||||||||||||||| ||||| || ||| |||||  |||||||    
T  7218158 gttttcatataagctataagttgttttcataacctatcctggagaacttatgaaaataag 7218099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 139 - 191
Target Start/End: Original strand, 15360849 - 15360903
Alignment:
Q  139 tctataacaaaagataaaataaa--taaacggttttcatataatctataagttgt 191  Q
    |||||||||||||||||||||||   |||| |||||||||||| |||||||||||    
T  15360849 tctataacaaaagataaaataaagtcaaactgttttcatataagctataagttgt 15360903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 231
Target Start/End: Complemental strand, 27963438 - 27963391
Alignment:
Q  184 taagttgttttcataagctatcgtgcagagcttatagaaataagctaa 231  Q
    |||||||||||||||||||||  || |||||||||| |||||||||||    
T  27963438 taagttgttttcataagctattatggagagcttatataaataagctaa 27963391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 35017562 - 35017621
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataag 227  Q
    |||||| ||||||||||| | |||||||||||||| || || ||||||||| ||||||||    
T  35017562 gttttcgtataatctatatgctgttttcataagctgtcctggagagcttatggaaataag 35017621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 169 - 231
Target Start/End: Complemental strand, 40751214 - 40751151
Alignment:
Q  169 ttttcatataatctat-aagttgttttcataagctatcgtgcagagcttatagaaataagctaa 231  Q
    ||||||||||| |||| ||||||||||||||||| ||| || ||||||||  ||||||||||||    
T  40751214 ttttcatataaactattaagttgttttcataagccatcatggagagcttactgaaataagctaa 40751151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 49517025 - 49517091
Alignment:
Q  139 tctataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagcta 203  Q
    |||||||||||||||||||||||   |||  |||||||| ||| ||||||| |||||||||||||||    
T  49517025 tctataacaaaagataaaataaagtcaaattgttttcatttaagctataagctgttttcataagcta 49517091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 139 - 229
Target Start/End: Original strand, 49557096 - 49557194
Alignment:
Q  139 tctataacaaaagataaaataaa--taaacggttttcatataatctataagttgttttc--ataagctatcgtgcag----agcttatagaaataagct 229  Q
    |||||||||||||||||||||||  ||||  || ||||| ||| |||||||||||||||  |||||||||| || ||    ||||||||||||||||||    
T  49557096 tctataacaaaagataaaataaagttaaatagtattcatttaagctataagttgttttcatataagctatcctgaagagctagcttatagaaataagct 49557194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 52286633 - 52286727
Alignment:
Q  139 tctataacaaaagataaaataaa--taaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagctaa 231  Q
    |||| ||||||||||||||||||  |||||  ||||||||||| ||||||  | ||||||||||  ||| || |||| |||| ||||||||||||    
T  52286633 tctacaacaaaagataaaataaagttaaacaattttcatataagctataaactattttcataagtcatcttgaagagtttatggaaataagctaa 52286727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 229
Target Start/End: Complemental strand, 7137075 - 7137021
Alignment:
Q  175 tataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    ||||||||||||| ||||||||||||||||| || ||| |||||  |||||||||    
T  7137075 tataatctataagctgttttcataagctatcttggagaacttatgaaaataagct 7137021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 205
Target Start/End: Original strand, 8130417 - 8130459
Alignment:
Q  163 aaacggttttcatataatctataagttgttttcataagctatc 205  Q
    |||| ||||||| |||| |||||||||||||||||||||||||    
T  8130417 aaactgttttcacataagctataagttgttttcataagctatc 8130459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 226
Target Start/End: Original strand, 15515527 - 15515585
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataa 226  Q
    |||||| ||||| |||||||||||||||||||| |||| || | ||||||| |||||||    
T  15515527 gttttcgtataagctataagttgttttcataagttatcatggatagcttatggaaataa 15515585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 229
Target Start/End: Original strand, 25479570 - 25479628
Alignment:
Q  171 ttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    ||||||||  ||||||||||||||||||||||||| |  |||||||||  |||||||||    
T  25479570 ttcatataggctataagttgttttcataagctatcctagagagcttatgaaaataagct 25479628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 229
Target Start/End: Complemental strand, 35590969 - 35590915
Alignment:
Q  175 tataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    ||||| |||||||| | |||||||||||||| || ||||||||| ||||||||||    
T  35590969 tataagctataagtcgatttcataagctatcatggagagcttatggaaataagct 35590915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 44422680 - 44422746
Alignment:
Q  163 aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||| |||||||||||| ||||||| | |||| |||||||||| || |||||||||  |||||||||    
T  44422680 aaactgttttcatataagctataagctatttttataagctatcctggagagcttatgaaaataagct 44422746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 230
Target Start/End: Complemental strand, 48830191 - 48830098
Alignment:
Q  139 tctataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagcta 230  Q
    ||||| || ||||||||||||||   ||||  ||||||||||| ||||||  ||||||||||||||||  |  |||||| ||||||||||||||    
T  48830191 tctattaccaaagataaaataaagtcaaactattttcatataagctataaactgttttcataagctattctaaagagctaatagaaataagcta 48830098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 4549631 - 4549570
Alignment:
Q  163 aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaat 224  Q
    |||| ||||||||| || ||||||| ||||||||||||| ||| || ||||||||| |||||    
T  4549631 aaactgttttcatacaagctataagatgttttcataagcaatcctggagagcttattgaaat 4549570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 31517855 - 31517763
Alignment:
Q  139 tctataacaaaagataaaataaa--taaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||| ||||||||||||||||||  ||||  | |||||||||| ||||||| ||| ||||||| || || || |||||||||  |||||||||    
T  31517855 tctacaacaaaagataaaataaagttaaattgatttcatataagctataagctgtcttcataatctgtcttggagagcttatgaaaataagct 31517763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 42556709 - 42556664
Alignment:
Q  174 atataatctataagttgttttcataagctatcgtgcagagcttata 219  Q
    |||||| ||||||||||||||||||||||||| || |||| |||||    
T  42556709 atataagctataagttgttttcataagctatcatggagagtttata 42556664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 229
Target Start/End: Original strand, 45205031 - 45205115
Alignment:
Q  147 aaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||||||||||||||   ||||  ||| ||||||| ||| ||||||||||||||||||||| || |||| | || ||||||||||    
T  45205031 aaaagataaaataaagtcaaactatttccatataagctagaagttgttttcataagctatcatgtagagttcatggaaataagct 45205115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 229
Target Start/End: Complemental strand, 23373375 - 23373335
Alignment:
Q  189 tgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    ||||||||||||||||| || |||||||| |||||||||||    
T  23373375 tgttttcataagctatcctgaagagcttacagaaataagct 23373335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 227
Target Start/End: Complemental strand, 30259602 - 30259511
Alignment:
Q  139 tctataacaaaagataaaataaa--taaacggttttcatataatctataagttgttttcat-aagctatcgtgcagagcttatagaaataag 227  Q
    |||||||||||| ||||||||||   |||| | ||| |||||| ||||||| ||||| ||| |||||||| || ||||||||| ||||||||    
T  30259602 tctataacaaaatataaaataaagtcaaactgctttgatataagctataagctgtttgcataaagctatcatggagagcttatggaaataag 30259511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 229
Target Start/End: Complemental strand, 37241905 - 37241845
Alignment:
Q  169 ttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    ||||||||||| ||| |||||||||||||||| |||| |  |||||||||  |||||||||    
T  37241905 ttttcatataagctagaagttgttttcataagatatcctagagagcttatgaaaataagct 37241845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 44928197 - 44928125
Alignment:
Q  246 catgtcattaattgtttctatgagatctttcaaacaatcttacaagtagttatgctagtcgatacgctcaaat 318  Q
    |||||||| | |||||||||| || |||| |||||||||||||||||  |||| |||||  ||| ||||||||    
T  44928197 catgtcataagttgtttctataagttcttccaaacaatcttacaagtgcttatactagtaaataagctcaaat 44928125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 39551321 - 39551234
Alignment:
Q  142 ataacaaaagataaaataaa--taaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataag 227  Q
    |||| |||||||||||||||  ||||| || |||||| || |||||||||||||||||||||| || || |||||||||| |||||||    
T  39551321 ataataaaagataaaataaagctaaactgtcttcatacaagctataagttgttttcataagctttcctggagagcttataaaaataag 39551234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 204
Target Start/End: Original strand, 35869760 - 35869859
Alignment:
Q  103 cttatcatataagttcttaattatttataaacaatctctataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataag 200  Q
    |||||||||||||||||||    | ||||| | || |||| ||||||| |||||||||||  ||||  ||||||||||| ||||||||||||||||||||    
T  35869760 cttatcatataagttctta----tgtataagcgatttctacaacaaaatataaaataaattcaaacaattttcatataagctataagttgttttcataag 35869855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 142 - 231
Target Start/End: Original strand, 2093237 - 2093328
Alignment:
Q  142 ataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagctaa 231  Q
    |||| |||||||||||||||   ||| ||||||| | ||| ||||||||||||||||| ||||||| || || | |||||||||||||||||    
T  2093237 ataataaaagataaaataaagtcaaatggttttcttttaagctataagttgttttcattagctatcctgaagcgtttatagaaataagctaa 2093328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 139 - 228
Target Start/End: Original strand, 10437840 - 10437930
Alignment:
Q  139 tctataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagc 228  Q
    |||||||||||||||||||||||   |||| ||||| |||||| || ||||| | |||||||||||||| |  |||||||||||||||||||    
T  10437840 tctataacaaaagataaaataaagtcaaactgtttt-atataagctttaagtaggtttcataagctatcttcgagagcttatagaaataagc 10437930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 139 - 215
Target Start/End: Original strand, 7714197 - 7714275
Alignment:
Q  139 tctataacaaaagataaaataaa--taaacggttttcatataatctataagttgttttcataagctatcgtgcagagct 215  Q
    |||||||||||||||||||||||  | | | |||||||||| | ||||||||||||||||| ||||||| || ||||||    
T  7714197 tctataacaaaagataaaataaaggtgagctgttttcatatcaactataagttgttttcatgagctatcttggagagct 7714275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 205
Target Start/End: Complemental strand, 35298589 - 35298524
Alignment:
Q  143 taacaaaagataaaataaat--aaacggttttca-tataatctataagttgttttcataagctatc 205  Q
    |||||||||||||||||||   |||| ||||||| ||||| |||||||||||||||||||||||||    
T  35298589 taacaaaagataaaataaagccaaacagttttcaatataaactataagttgttttcataagctatc 35298524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 218
Target Start/End: Complemental strand, 39866855 - 39866768
Alignment:
Q  136 atctctataacaaaagataaaataaa---taaacggttttcatataatctataagttgttttc--ataagctatcgtgcagagcttat 218  Q
    ||||||||||||||||||||||||||    |||| ||||||||| || |||||| ||||||||  |||||||||| || |||||||||    
T  39866855 atctctataacaaaagataaaataaagtcaaaactgttttcataaaaactataaattgttttcatataagctatcttgaagagcttat 39866768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 4763878 - 4763954
Alignment:
Q  144 aacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttat 218  Q
    |||||||||||||||||||  |||| ||||||| |||| ||||||| ||||||  ||||||||| || |||||||||    
T  4763878 aacaaaagataaaataaattcaaaccgttttcacataagctataagctgtttttctaagctatcctgaagagcttat 4763954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 6509381 - 6509328
Alignment:
Q  174 atataatctataagttgttttcataagctatcgtgcagagcttatagaaataag 227  Q
    |||||| ||||||| ||||||||||||||||| || ||||||||| ||||||||    
T  6509381 atataagctataagctgttttcataagctatcctggagagcttattgaaataag 6509328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 229
Target Start/End: Original strand, 7645964 - 7646025
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||||||| ||| ||||||||||||||||||||||| | || | ||||||| ||||||||||    
T  7645964 gttttcatgtaagctataagttgttttcataagctaacctgtaaagcttatggaaataagct 7646025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 205
Target Start/End: Complemental strand, 9834873 - 9834836
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctatc 205  Q
    |||||||||||| |||||||||||||||||||||||||    
T  9834873 gttttcatataagctataagttgttttcataagctatc 9834836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 229
Target Start/End: Complemental strand, 39561625 - 39561564
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||||||| ||| ||||||||||||||| ||||||||| || | ||||||| ||||||||||    
T  39561625 gttttcatctaaactataagttgttttcgtaagctatcatgaaaagcttatggaaataagct 39561564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 229
Target Start/End: Complemental strand, 7918844 - 7918796
Alignment:
Q  181 ctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    ||||||||||||||||||||||||| || ||||||| | ||||||||||    
T  7918844 ctataagttgttttcataagctatcttgtagagcttgtggaaataagct 7918796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 4558753 - 4558847
Alignment:
Q  139 tctataacaaaagataaaataaa--taaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagctaa 231  Q
    ||||||| |||||||||||||||  ||||   ||||||||||  ||||||| ||||| ||||||||||| |  ||||||||| ||||||| ||||    
T  4558753 tctataataaaagataaaataaagttaaattattttcatatatgctataagctgtttccataagctatcctagagagcttatggaaataaactaa 4558847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 34770853 - 34770915
Alignment:
Q  145 acaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctatc 205  Q
    |||||||||||||||||   |||  |||||||| ||| |||||||||||||||||||||||||    
T  34770853 acaaaagataaaataaagtcaaattgttttcatttaagctataagttgttttcataagctatc 34770915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 1561260 - 1561321
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctatc--gtgcagagcttatagaaataag 227  Q
    ||||| |||||| ||| |||||||||||||||||||||  ||| ||||| ||||||||||||    
T  1561260 gttttaatataagctacaagttgttttcataagctatcctgtgaagagcatatagaaataag 1561321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 2091747 - 2091808
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctatc--gtgcagagcttatagaaataag 227  Q
    ||||| |||||| ||| |||||||||||||||||||||  ||| ||||| ||||||||||||    
T  2091747 gttttaatataagctacaagttgttttcataagctatcctgtgaagagcatatagaaataag 2091808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 11813194 - 11813128
Alignment:
Q  163 aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||| |||| |||||||| |||||  ||||||||||||||||| |  |||||||| |||||||||||    
T  11813194 aaactgtttccatataatttataatctgttttcataagctatcttcaagagcttacagaaataagct 11813128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 30013199 - 30013265
Alignment:
Q  163 aaacggttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||| |||| ||||||| ||||||| ||||||||||||||||| || ||| || || ||||||||||    
T  30013199 aaactgtttccatataagctataagctgttttcataagctatcctgtagaactaatggaaataagct 30013265  T

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Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 229
Target Start/End: Original strand, 11795078 - 11795139
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    ||||||||||||  |||||| || |||||||||||||  || ||||||||| ||||||||||    
T  11795078 gttttcatataagttataagctgatttcataagctattatggagagcttatggaaataagct 11795139  T

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Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 27728136 - 27728068
Alignment:
Q  139 tctataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctatc 205  Q
    ||||||| |||||||||||||||   ||||  |||||||||||  ||| ||||||||||||||||||||    
T  27728136 tctataaaaaaagataaaataaagtcaaactattttcatataaagtattagttgttttcataagctatc 27728068  T

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Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 226
Target Start/End: Original strand, 29973068 - 29973125
Alignment:
Q  169 ttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataa 226  Q
    |||||| |||| ||||||||||||||||||||||||| |  |||| |||| |||||||    
T  29973068 ttttcacataagctataagttgttttcataagctatccttgagagtttatggaaataa 29973125  T

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Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 205
Target Start/End: Original strand, 31884580 - 31884617
Alignment:
Q  168 gttttcatataatctataagttgttttcataagctatc 205  Q
    |||||||||||| |||||| ||||||||||||||||||    
T  31884580 gttttcatataagctataaattgttttcataagctatc 31884617  T

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Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 229
Target Start/End: Original strand, 33553246 - 33553287
Alignment:
Q  188 ttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    |||||||||||||||||| || ||||||||| ||||||||||    
T  33553246 ttgttttcataagctatcttgaagagcttatggaaataagct 33553287  T

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Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 201
Target Start/End: Original strand, 42597356 - 42597420
Alignment:
Q  139 tctataacaaaagataaaataaa--taaacggttttcatataatctataagttgttttcataagc 201  Q
    |||||||||||||||||||||||   |||  ||||||||  || |||||||||||||||||||||    
T  42597356 tctataacaaaagataaaataaagtaaaattgttttcatgcaagctataagttgttttcataagc 42597420  T

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Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 200
Target Start/End: Complemental strand, 43704467 - 43704430
Alignment:
Q  163 aaacggttttcatataatctataagttgttttcataag 200  Q
    |||| |||||||||||| ||||||||||||||||||||    
T  43704467 aaactgttttcatataaactataagttgttttcataag 43704430  T

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Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 202
Target Start/End: Original strand, 926442 - 926508
Alignment:
Q  139 tctataacaaaagataaaataaat---aaacggttttcatataatctataagttgttttcataagct 202  Q
    ||||||||| |||||||||||||    |||| |||||  ||| ||||||||||||||||||||||||    
T  926442 tctataacacaagataaaataaagtcaaaactgtttttgtattatctataagttgttttcataagct 926508  T

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Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 4762512 - 4762556
Alignment:
Q  185 aagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    ||||||||||||||||||||| || |||||||||  |||||||||    
T  4762512 aagttgttttcataagctatcttgaagagcttatgtaaataagct 4762556  T

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Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 10460590 - 10460638
Alignment:
Q  169 ttttcatataatctataagttgttttcataagctatcgtgcagagctta 217  Q
    |||||||| || |||||||| |||||||||||||||| || ||||||||    
T  10460590 ttttcatacaagctataagtggttttcataagctatcatgtagagctta 10460638  T

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Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 205
Target Start/End: Original strand, 24558840 - 24558876
Alignment:
Q  169 ttttcatataatctataagttgttttcataagctatc 205  Q
    ||||| ||||| |||||||||||||||||||||||||    
T  24558840 ttttcgtataagctataagttgttttcataagctatc 24558876  T

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Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 229
Target Start/End: Original strand, 27028830 - 27028878
Alignment:
Q  181 ctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    ||||||| ||||||||||||||||| || |||||||||  |||||||||    
T  27028830 ctataagctgttttcataagctatcttggagagcttatgaaaataagct 27028878  T

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Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 229
Target Start/End: Complemental strand, 28769422 - 28769362
Alignment:
Q  169 ttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagct 229  Q
    ||||| ||||| ||||||| ||||||||||||||||  || |||| |||| ||||||||||    
T  28769422 ttttcttataagctataagctgttttcataagctattttggagagtttatggaaataagct 28769362  T

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Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 227
Target Start/End: Complemental strand, 29695567 - 29695527
Alignment:
Q  187 gttgttttcataagctatcgtgcagagcttatagaaataag 227  Q
    ||||||||||| |||||||||| |||||||||| |||||||    
T  29695567 gttgttttcattagctatcgtggagagcttatacaaataag 29695527  T

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Target: scaffold0167 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 230
Target Start/End: Original strand, 17263 - 17324
Alignment:
Q  169 ttttcatataatctataagttgttttcataagctatcgtgcagagcttatagaaataagcta 230  Q
    |||| ||| |||||||||||||||||||||||||||| || ||| ||||||| |||||||||    
T  17263 ttttaatacaatctataagttgttttcataagctatcttggagaacttatagcaataagcta 17324  T

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Target: scaffold0100 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 42572 - 42638
Alignment:
Q  139 tctataacaaaagataaaataaa-taaacggttttcatataatctataagttgttttcataagctat 204  Q
    ||||||||||||||||||||| | |||||   |||||||||| |||| |||||||||||||||||||    
T  42572 tctataacaaaagataaaatagagtaaacctgtttcatataagctattagttgttttcataagctat 42638  T

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Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 27531 - 27599
Alignment:
Q  139 tctataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataagctatc 205  Q
    ||||||||| |||||||||||||   |||  |||||||||||| ||||||||||||||||||| |||||    
T  27531 tctataacagaagataaaataaagtcaaattgttttcatataaactataagttgttttcataaactatc 27599  T

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Target: scaffold0053 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 200
Target Start/End: Original strand, 20134 - 20197
Alignment:
Q  139 tctataacaaaagataaaataaat--aaacggttttcatataatctataagttgttttcataag 200  Q
    |||||||| ||||||||||||||   |||| ||| |||||||| |||| |||||||||||||||    
T  20134 tctataaccaaagataaaataaagtcaaacagttatcatataagctattagttgttttcataag 20197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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