View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8132_low_31 (Length: 285)
Name: NF8132_low_31
Description: NF8132
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8132_low_31 |
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Alignment Details
Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 10 - 267
Target Start/End: Original strand, 42205743 - 42206019
Alignment:
| Q |
10 |
attattctccaattcatcactagtcattgtaaactttcttcctaatatgatttaagataacaaaatgaacttctacctctaaatat-------------- |
95 |
Q |
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| T |
42205743 |
attattctccaattcatcactagtcattgtaaactttcttcctaatatgatttaagataacaaaatgaacttctacctctaaatatgaaaatttagactt |
42205842 |
T |
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| Q |
96 |
-----gtgaacaaccgaatggcaaattggctaatatatagcactttgtactaggtgttataactctgcagactgccagtaatagcacctacatctctctt |
190 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42205843 |
gatatgtgaacaaccgaatggcaaattggctaatatatagcactttgtactaggtgttataactctgcagactgccagtaatagcacctacatctctctt |
42205942 |
T |
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| Q |
191 |
ttagtttaatccaaccttgttacaaaaatacttgaatccatatgaaaatgaaagaaaacataccacaacaacaaatg |
267 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42205943 |
ttagtttaatccaaccttgttacaaaaatacttgaatccatatgaaaatgaaagaaaacataccacaacaacaaatg |
42206019 |
T |
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