View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8132_low_4 (Length: 250)
Name: NF8132_low_4
Description: NF8132
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8132_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 42600580 - 42600339
Alignment:
| Q |
1 |
caactccttcaactttccacgttccaatcccaaaccttcagaaagcaactcaaaaaccacttcagcaactccggccgcatgaaaatcccattcaaccatc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42600580 |
caactccttcaactttccacgttccaatcccaaaccttcagagagcaactcaaaaaccacttcagcaactccggccgcatgaaaatcccattcaaccatc |
42600481 |
T |
|
| Q |
101 |
tccttacgacaaatctccggcaactcctcggctttcggtgcctccggtgccatccacgcttgcagagaatcatgccagctggcagcgttggttctataca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42600480 |
tccttacgacaaatctccggcaactcctcggctttcggtgcctccggtgccatccacgcttgcagagaatcatgccagctggcagcgttggttctataca |
42600381 |
T |
|
| Q |
201 |
agtcattgttgcttgcatacatcactccacgtccttcttctc |
242 |
Q |
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||||||||||||||||||||||||||||||||||||| |||| |
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| T |
42600380 |
agtcattgttgcttgcatacatcactccacgtccttcatctc |
42600339 |
T |
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