View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8132_low_8 (Length: 600)

Name: NF8132_low_8
Description: NF8132
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8132_low_8
NF8132_low_8
[»] chr7 (45 HSPs)
chr7 (24-229)||(24228933-24229138)
chr7 (440-590)||(24228386-24228536)
chr7 (300-415)||(24228752-24228866)
chr7 (446-587)||(6602338-6602479)
chr7 (446-587)||(39859209-39859350)
chr7 (442-587)||(34776895-34777040)
chr7 (465-590)||(30940402-30940527)
chr7 (441-590)||(47386186-47386335)
chr7 (446-590)||(37115503-37115647)
chr7 (446-590)||(38474120-38474264)
chr7 (465-587)||(13168142-13168267)
chr7 (466-587)||(45359359-45359480)
chr7 (446-572)||(37796176-37796302)
chr7 (441-532)||(13169683-13169774)
chr7 (499-590)||(48852324-48852415)
chr7 (446-569)||(27666063-27666186)
chr7 (446-569)||(29996512-29996635)
chr7 (498-590)||(35693347-35693441)
chr7 (446-532)||(34775001-34775087)
chr7 (446-590)||(56333-56477)
chr7 (440-532)||(48227941-48228033)
chr7 (442-532)||(39857644-39857734)
chr7 (38-142)||(24225003-24225107)
chr7 (442-532)||(6605397-6605487)
chr7 (446-532)||(22155847-22155933)
chr7 (446-532)||(22211762-22211848)
chr7 (446-532)||(37113944-37114030)
chr7 (440-532)||(27664427-27664519)
chr7 (446-566)||(13018036-13018158)
chr7 (446-533)||(37791657-37791744)
chr7 (446-532)||(24226584-24226670)
chr7 (446-532)||(35401972-35402058)
chr7 (446-532)||(35403619-35403705)
chr7 (453-566)||(33038798-33038911)
chr7 (446-523)||(46439542-46439619)
chr7 (465-568)||(20478064-20478167)
chr7 (446-532)||(78014-78100)
chr7 (446-532)||(47384297-47384383)
chr7 (528-572)||(23906256-23906300)
chr7 (450-533)||(13039641-13039724)
chr7 (499-566)||(46996703-46996770)
chr7 (446-532)||(46437110-46437196)
chr7 (453-555)||(46812594-46812696)
chr7 (440-532)||(20479719-20479811)
chr7 (499-567)||(40784402-40784470)
[»] chr4 (28 HSPs)
chr4 (438-590)||(41761723-41761875)
chr4 (446-587)||(51011929-51012070)
chr4 (446-590)||(49523127-49523271)
chr4 (446-590)||(48813790-48813934)
chr4 (438-590)||(41781534-41781686)
chr4 (482-590)||(42980674-42980782)
chr4 (446-590)||(2693230-2693373)
chr4 (465-587)||(52868129-52868251)
chr4 (465-590)||(48646724-48646849)
chr4 (465-587)||(35404425-35404547)
chr4 (446-590)||(43519427-43519571)
chr4 (446-532)||(39345567-39345653)
chr4 (440-571)||(11601668-11601798)
chr4 (446-532)||(35401752-35401838)
chr4 (446-523)||(48645258-48645335)
chr4 (440-532)||(20493824-20493916)
chr4 (446-533)||(2691377-2691463)
chr4 (446-533)||(20819988-20820075)
chr4 (441-532)||(43507165-43507256)
chr4 (480-558)||(2350516-2350594)
chr4 (446-532)||(4173740-4173826)
chr4 (446-532)||(43508653-43508739)
chr4 (446-523)||(320909-320986)
chr4 (453-566)||(44558494-44558607)
chr4 (446-532)||(319276-319362)
chr4 (447-489)||(11254123-11254165)
chr4 (446-532)||(33266010-33266096)
chr4 (453-514)||(4520471-4520532)
[»] chr1 (37 HSPs)
chr1 (446-590)||(2869582-2869726)
chr1 (446-587)||(31238475-31238616)
chr1 (446-587)||(37344345-37344486)
chr1 (446-590)||(27087286-27087430)
chr1 (446-586)||(50556078-50556218)
chr1 (440-587)||(6818658-6818805)
chr1 (437-587)||(4855946-4856096)
chr1 (468-590)||(51896129-51896251)
chr1 (446-587)||(25278348-25278489)
chr1 (446-587)||(34778118-34778259)
chr1 (498-590)||(15104496-15104588)
chr1 (437-590)||(3013447-3013606)
chr1 (438-590)||(46583533-46583685)
chr1 (443-590)||(33602621-33602768)
chr1 (440-541)||(25278979-25279080)
chr1 (446-532)||(2871076-2871162)
chr1 (446-532)||(31236822-31236908)
chr1 (446-532)||(25276745-25276831)
chr1 (443-532)||(3011855-3011944)
chr1 (445-590)||(52643597-52643737)
chr1 (458-532)||(33599233-33599307)
chr1 (446-532)||(37345962-37346048)
chr1 (446-523)||(25278857-25278934)
chr1 (446-523)||(52641891-52641968)
chr1 (465-568)||(9121667-9121770)
chr1 (499-566)||(36895511-36895578)
chr1 (446-532)||(26223590-26223676)
chr1 (446-532)||(34776572-34776658)
chr1 (446-532)||(46582013-46582099)
chr1 (438-519)||(37088149-37088230)
chr1 (453-566)||(42134492-42134605)
chr1 (499-580)||(51121961-51122042)
chr1 (443-532)||(51894567-51894656)
chr1 (446-530)||(8167945-8168029)
chr1 (453-560)||(18183950-18184057)
chr1 (446-532)||(8169568-8169654)
chr1 (453-566)||(35479976-35480089)
[»] chr2 (30 HSPs)
chr2 (440-590)||(39664745-39664895)
chr2 (440-587)||(16763073-16763220)
chr2 (453-590)||(40560233-40560370)
chr2 (440-590)||(2766931-2767081)
chr2 (443-590)||(17696206-17696353)
chr2 (446-587)||(19908246-19908388)
chr2 (446-588)||(44709744-44709886)
chr2 (441-590)||(14389081-14389230)
chr2 (447-590)||(42519202-42519346)
chr2 (479-587)||(16377197-16377305)
chr2 (446-590)||(39455172-39455316)
chr2 (464-590)||(6797528-6797654)
chr2 (454-590)||(37645498-37645634)
chr2 (443-532)||(6799408-6799497)
chr2 (446-523)||(19581417-19581494)
chr2 (446-532)||(16376739-16376825)
chr2 (499-579)||(15432384-15432464)
chr2 (443-523)||(19906682-19906762)
chr2 (465-568)||(24208061-24208164)
chr2 (446-532)||(34400317-34400403)
chr2 (480-566)||(37417310-37417396)
chr2 (458-532)||(39663169-39663243)
chr2 (446-532)||(14387352-14387438)
chr2 (446-532)||(16764611-16764697)
chr2 (499-566)||(39398-39465)
chr2 (499-558)||(92356-92415)
chr2 (465-568)||(6786000-6786103)
chr2 (499-566)||(29909661-29909728)
chr2 (446-532)||(40561878-40561964)
chr2 (446-487)||(42517561-42517602)
[»] chr5 (31 HSPs)
chr5 (446-587)||(17574321-17574462)
chr5 (446-590)||(36057590-36057734)
chr5 (446-590)||(34327638-34327782)
chr5 (446-587)||(7267846-7267987)
chr5 (446-587)||(2179790-2179931)
chr5 (452-587)||(30468260-30468395)
chr5 (440-590)||(24541188-24541339)
chr5 (441-586)||(8539673-8539818)
chr5 (498-590)||(18624985-18625077)
chr5 (446-532)||(8541271-8541357)
chr5 (446-532)||(12738736-12738822)
chr5 (446-532)||(12801559-12801645)
chr5 (446-532)||(30463903-30463989)
chr5 (446-590)||(2854304-2854447)
chr5 (446-532)||(21842992-21843078)
chr5 (440-532)||(7269446-7269538)
chr5 (436-532)||(28822090-28822186)
chr5 (465-568)||(29621780-29621883)
chr5 (443-534)||(43492131-43492222)
chr5 (499-565)||(38178095-38178161)
chr5 (499-565)||(38205319-38205385)
chr5 (446-523)||(41493847-41493924)
chr5 (525-573)||(15459183-15459231)
chr5 (475-532)||(28813765-28813822)
chr5 (465-549)||(42473625-42473709)
chr5 (499-566)||(18728603-18728670)
chr5 (465-532)||(29620160-29620227)
chr5 (499-566)||(32087570-32087637)
chr5 (446-532)||(2852889-2852975)
chr5 (453-566)||(43318061-43318174)
chr5 (440-532)||(40782211-40782303)
[»] chr3 (49 HSPs)
chr3 (446-587)||(2226152-2226293)
chr3 (446-587)||(53190759-53190900)
chr3 (446-590)||(21348726-21348870)
chr3 (446-590)||(30599915-30600059)
chr3 (446-590)||(51684613-51684757)
chr3 (441-587)||(27899081-27899227)
chr3 (446-590)||(43765140-43765284)
chr3 (465-587)||(35905712-35905834)
chr3 (446-572)||(54898440-54898566)
chr3 (441-590)||(42279505-42279654)
chr3 (446-590)||(17515313-17515457)
chr3 (446-587)||(46112490-46112631)
chr3 (443-587)||(2377029-2377173)
chr3 (506-590)||(48830803-48830887)
chr3 (465-590)||(23293167-23293292)
chr3 (446-571)||(41977753-41977878)
chr3 (498-590)||(46197775-46197867)
chr3 (439-590)||(44794204-44794354)
chr3 (468-590)||(3152215-3152337)
chr3 (458-532)||(23291585-23291659)
chr3 (452-569)||(2660221-2660338)
chr3 (517-590)||(44276193-44276266)
chr3 (525-587)||(7884873-7884935)
chr3 (446-523)||(48829359-48829436)
chr3 (498-590)||(19987591-19987683)
chr3 (440-532)||(30598334-30598426)
chr3 (440-532)||(44267978-44268070)
chr3 (440-532)||(54412547-54412639)
chr3 (441-532)||(53094273-53094364)
chr3 (446-532)||(38193510-38193596)
chr3 (446-532)||(41979352-41979438)
chr3 (446-532)||(46308810-46308896)
chr3 (446-532)||(46310436-46310522)
chr3 (475-532)||(46114105-46114162)
chr3 (446-532)||(3150255-3150341)
chr3 (446-532)||(46609152-46609238)
chr3 (446-532)||(54900074-54900160)
chr3 (446-523)||(600728-600805)
chr3 (453-556)||(2977340-2977443)
chr3 (499-566)||(48633933-48634000)
chr3 (446-532)||(7883331-7883417)
chr3 (446-532)||(38191898-38191984)
chr3 (446-532)||(53092626-53092712)
chr3 (446-532)||(53187745-53187831)
chr3 (453-550)||(23774162-23774259)
chr3 (485-558)||(33852679-33852752)
chr3 (446-523)||(51686403-51686480)
chr3 (543-587)||(600809-600853)
chr3 (452-532)||(2661908-2661988)
[»] chr8 (41 HSPs)
chr8 (446-590)||(13282481-13282625)
chr8 (446-587)||(8609787-8609928)
chr8 (442-590)||(26242311-26242459)
chr8 (441-587)||(38547226-38547372)
chr8 (460-590)||(41042581-41042711)
chr8 (446-590)||(7745109-7745253)
chr8 (442-590)||(41825641-41825789)
chr8 (446-587)||(13108336-13108477)
chr8 (465-590)||(13486096-13486221)
chr8 (444-590)||(42941775-42941921)
chr8 (446-590)||(22272337-22272483)
chr8 (498-590)||(9673162-9673254)
chr8 (446-569)||(27691157-27691280)
chr8 (498-590)||(40339677-40339769)
chr8 (446-590)||(5036448-5036596)
chr8 (446-532)||(42943426-42943512)
chr8 (446-523)||(34681075-34681152)
chr8 (446-532)||(22273891-22273977)
chr8 (446-523)||(26238729-26238806)
chr8 (440-532)||(33761066-33761158)
chr8 (458-532)||(13106819-13106893)
chr8 (442-532)||(13283995-13284085)
chr8 (440-532)||(33762713-33762805)
chr8 (441-532)||(38548831-38548922)
chr8 (446-532)||(601704-601790)
chr8 (446-532)||(5038062-5038147)
chr8 (446-532)||(27692837-27692923)
chr8 (498-590)||(33708801-33708893)
chr8 (452-511)||(13484554-13484613)
chr8 (465-568)||(15305819-15305922)
chr8 (465-568)||(15486188-15486291)
chr8 (499-566)||(33750385-33750452)
chr8 (499-566)||(37526024-37526091)
chr8 (446-532)||(29239187-29239273)
chr8 (480-558)||(31201152-31201230)
chr8 (446-532)||(35509217-35509303)
chr8 (453-550)||(462387-462484)
chr8 (453-558)||(33160157-33160262)
chr8 (441-490)||(41040718-41040767)
chr8 (458-523)||(41823905-41823970)
chr8 (465-549)||(27406935-27407019)
[»] chr6 (21 HSPs)
chr6 (444-590)||(7372935-7373081)
chr6 (467-590)||(20523390-20523513)
chr6 (440-587)||(32439071-32439218)
chr6 (441-590)||(13613559-13613708)
chr6 (498-590)||(9398715-9398807)
chr6 (437-590)||(6899479-6899632)
chr6 (453-590)||(10568409-10568546)
chr6 (446-587)||(32516880-32517021)
chr6 (454-590)||(14338452-14338588)
chr6 (446-587)||(11355225-11355366)
chr6 (525-590)||(7049839-7049904)
chr6 (446-532)||(32518497-32518583)
chr6 (446-523)||(10569928-10570005)
chr6 (465-568)||(3456770-3456873)
chr6 (446-512)||(7371178-7371244)
chr6 (446-532)||(9400035-9400121)
chr6 (446-532)||(20525334-20525420)
chr6 (435-532)||(32454240-32454337)
chr6 (478-580)||(30891159-30891261)
chr6 (458-523)||(13610705-13610770)
chr6 (446-523)||(21068628-21068705)
[»] scaffold1454 (1 HSPs)
scaffold1454 (443-587)||(1263-1407)
[»] scaffold0058 (3 HSPs)
scaffold0058 (446-590)||(3297-3441)
scaffold0058 (446-590)||(4469-4613)
scaffold0058 (446-532)||(14343-14429)
[»] scaffold0564 (1 HSPs)
scaffold0564 (446-587)||(8265-8404)
[»] scaffold0004 (1 HSPs)
scaffold0004 (446-532)||(106673-106757)
[»] scaffold0002 (1 HSPs)
scaffold0002 (452-519)||(436274-436341)


Alignment Details
Target: chr7 (Bit Score: 186; Significance: 1e-100; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 24 - 229
Target Start/End: Complemental strand, 24229138 - 24228933
Alignment:
Q  24 ggggaacaggtgaggagggtttggattgtgagggtggtgtcgatggtgatggagtaggtgttgtgggtgtcgtaggggaggtggttgtcgaagagggtga 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24229138 ggggaacaggtgaggagggtttggattgtgagggtggtgtcgatggtgatggagtaggtgttgtgggtgtcgtaggggaggtggttgtcgaagagggtga 24229039  T
Q  124 tgttgaagggtgatggtgtgagatttgggttggggattggcatgttaatgggattgtcgttttggtcaacgagggtgatcggcattttgaaatttggttg 223  Q
    |||||||||||||||||||| | ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  24229038 tgttgaagggtgatggtgtggggtttgggttggggattggcatgtagatgggattgtcgttttggtcaacgagggtgatcggcattttgaaatttgggtg 24228939  T
Q  224 attggt 229  Q
    ||||||    
T  24228938 attggt 24228933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 440 - 590
Target Start/End: Complemental strand, 24228536 - 24228386
Alignment:
Q  440 aatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagac 539  Q
    ||||||||||| ||||| |||||  ||||||||| |||||| |||||||||  |||  ||||||||||||||||||||||||||||||||||||||||||    
T  24228536 aatgattaatacctcaatttcgttcttgaattttaaaaaattggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaattttacagac 24228437  T
Q  540 gttcatcaaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    || |||||||||||||||||||||||||||||| |||||||||||||||||    
T  24228436 gtccatcaaaatggtcccttcgtccaaaagctccattagtggtgatgatgt 24228386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 300 - 415
Target Start/End: Complemental strand, 24228866 - 24228752
Alignment:
Q  300 tattgtggggtggacggggcgtgagtggaggagtgagtgagacgagtggggtagtcacggaagtgaggtgtaatagtgtagtgtttgctaaagattctgg 399  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  24228866 tattgtggggtggacggggcgtgagtggaggagtgagtgagacgagtggggtagtcacggaagtgaggtgtaatagtgtagtgtttgttaaagatt-tgg 24228768  T
Q  400 acatttgactggctga 415  Q
    | |||||| |||||||    
T  24228767 atatttgattggctga 24228752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 446 - 587
Target Start/End: Original strand, 6602338 - 6602479
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||| ||||| |||| | ||||||||| |||||||||| ||| ||||||  |||||||||||||||||||||||||| ||||||||||||||||| |||    
T  6602338 taataactcaaattcgaccttgaattttaaaaaatcggctaaacttatccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 6602437  T
Q  546 caaaatggtcccttcgtccaaaagctctattagtggtgatga 587  Q
    ||||||||||||| |||||||||||||  |||||||||||||    
T  6602438 caaaatggtccctccgtccaaaagctccgttagtggtgatga 6602479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 446 - 587
Target Start/End: Complemental strand, 39859350 - 39859209
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||||||  |||  ||||||||||||||||||||||||||  |||||||||||||||| | |    
T  39859350 taatacctcaaattcgtccttgaattttaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattttacagacgtccgt 39859251  T
Q  546 caaaatggtcccttcgtccaaaagctctattagtggtgatga 587  Q
    ||||||||||||| |||||||||||||  |||||||||||||    
T  39859250 caaaatggtccctccgtccaaaagctccgttagtggtgatga 39859209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 442 - 587
Target Start/End: Complemental strand, 34777040 - 34776895
Alignment:
Q  442 tgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgt 541  Q
    ||||||||| ||||| |||||  || |||||| |||||| ||||||||| || |  |||||||||||||||||||||||||| |||||||||||||||||    
T  34777040 tgattaatacctcaaattcgttcttaaattttaaaaaattggccaaattcattcctgaattttgcgaaatatctatttagtccctgaattttacagacgt 34776941  T
Q  542 tcatcaaaatggtcccttcgtccaaaagctctattagtggtgatga 587  Q
     |||||||||||||||| ||||||||| |||  |||||| ||||||    
T  34776940 ccatcaaaatggtccctccgtccaaaaactccgttagtgatgatga 34776895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 465 - 590
Target Start/End: Complemental strand, 30940527 - 30940402
Alignment:
Q  465 ttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtcc 564  Q
    ||||||||| ||||||||||||||||  ||    |||||| |||||||||||||||||| |||||||||||| |||||||||||||||||| || |||||    
T  30940527 ttgaattttaaaaaatcggccaaattcgtctcttaattttacgaaatatctatttagtccctgaattttacaaacgttcatcaaaatggtctctccgtcc 30940428  T
Q  565 aaaagctctattagtggtgatgatgt 590  Q
    ||||||||  ||||||||||||||||    
T  30940427 aaaagctccgttagtggtgatgatgt 30940402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 441 - 590
Target Start/End: Complemental strand, 47386335 - 47386186
Alignment:
Q  441 atgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacg 540  Q
    |||| ||||| ||||| |||||| || |||||| ||||||| | ||||||  |||  |||||||||||||||| |||||||||||| |||||||||||||    
T  47386335 atgactaatacctcaaattcgtcctttaattttaaaaaatcagtcaaattcgtccttgaattttgcgaaatatttatttagtctctaaattttacagacg 47386236  T
Q  541 ttcatcaaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    | |||||||||||||  | |||||||||||||  ||||||||||||||||    
T  47386235 tccatcaaaatggtcattccgtccaaaagctccgttagtggtgatgatgt 47386186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 446 - 590
Target Start/End: Complemental strand, 37115647 - 37115503
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||| ||||| |||||| ||||||||| ||||||| | ||||||  | |  ||||||||| |||||||||||||||  ||||||||||||||||| |||    
T  37115647 taatacctcaaattcgtcattgaattttaaaaaatcagtcaaattcgttcctgaattttgcaaaatatctatttagtacctgaattttacagacgtccat 37115548  T
Q  546 caaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    |||||| |||||| |||||||||||||  ||||||||||||||||    
T  37115547 caaaatagtccctccgtccaaaagctccgttagtggtgatgatgt 37115503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 446 - 590
Target Start/End: Complemental strand, 38474264 - 38474120
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||| ||||| || ||| | ||||||||||||||||| ||||||  |||  ||||||||||||||||||||||||||  |||||||||||||||   ||    
T  38474264 taatacctcaaattagtcctcgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccttgaattttacagacgcctat 38474165  T
Q  546 caaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    ||||||||||| | |||||||||||||  ||||||||||||||||    
T  38474164 caaaatggtccatccgtccaaaagctccgttagtggtgatgatgt 38474120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 465 - 587
Target Start/End: Original strand, 13168142 - 13168267
Alignment:
Q  465 ttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctct---gaattttacagacgttcatcaaaatggtcccttcg 561  Q
    ||||||||| ||||||||||||||||  |||  |||||||||||||||||||||||||| ||   ||||||||||||||| |||||||||||||| | ||    
T  13168142 ttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctcctgaattttacagacgtccatcaaaatggtccatccg 13168241  T
Q  562 tccaaaagctctattagtggtgatga 587  Q
    |||||||||||  |||||||||||||    
T  13168242 tccaaaagctccgttagtggtgatga 13168267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 466 - 587
Target Start/End: Original strand, 45359359 - 45359480
Alignment:
Q  466 tgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtcca 565  Q
    |||||||| ||||||||| |||||   |||  ||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||| | ||||    
T  45359359 tgaattttaaaaaatcggtcaaatccgtccttgaattttgcgaaatatctatttagtccttgaattttacagacgtccatcaaaatggtccctccatcca 45359458  T
Q  566 aaagctctattagtggtgatga 587  Q
    |||||||  |||||||||||||    
T  45359459 aaagctccgttagtggtgatga 45359480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 446 - 572
Target Start/End: Complemental strand, 37796302 - 37796176
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||| ||||| || ||| ||||||||| ||||||| ||||||||  |||   ||||||||||||||||||||||||| ||||||||||| ||||| |||    
T  37796302 taatacctcaaatttgtccttgaattttcaaaaatcagccaaattcgtcctcaaattttgcgaaatatctatttagtccctgaattttacggacgtccat 37796203  T
Q  546 caaaatggtcccttcgtccaaaagctc 572  Q
    |||||| |||||| |||||| ||||||    
T  37796202 caaaatagtccctccgtccataagctc 37796176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 441 - 532
Target Start/End: Complemental strand, 13169774 - 13169683
Alignment:
Q  441 atgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    |||| ||||| ||||| |||||| ||||||||| ||||||||||||||||| |||  |||||||||||||||||||||||||| ||||||||    
T  13169774 atgactaatacctcaaattcgtccttgaattttcaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattt 13169683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 499 - 590
Target Start/End: Complemental strand, 48852415 - 48852324
Alignment:
Q  499 aattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    |||||||| ||||||||||||| ||  |||||||||||||||| ||||||||||||| ||  ||||||||||||| ||||||||||||||||    
T  48852415 aattttgcaaaatatctatttaatccttgaattttacagacgtccatcaaaatggtctctcggtccaaaagctctgttagtggtgatgatgt 48852324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 446 - 569
Target Start/End: Complemental strand, 27666186 - 27666063
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||| ||  |||  ||||||||||||||||| | |||||| |||||||||||| |||| |||    
T  27666186 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaaacgtccat 27666087  T
Q  546 caaaatggtcccttcgtccaaaag 569  Q
    ||||   |||||| ||||||||||    
T  27666086 caaatccgtccctccgtccaaaag 27666063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 446 - 569
Target Start/End: Complemental strand, 29996635 - 29996512
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||| ||||| |||||| ||||||||| ||||||||| ||| ||| |||  ||||||||||||||||| | ||| || ||||||||||||||||| |||    
T  29996635 taatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattaatccctgaattttacagacgtccat 29996536  T
Q  546 caaaatggtcccttcgtccaaaag 569  Q
    |||| | |||||| | ||||||||    
T  29996535 caaattcgtccctccatccaaaag 29996512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 498 - 590
Target Start/End: Complemental strand, 35693441 - 35693347
Alignment:
Q  498 gaattttgcgaaatatctat--ttagtctctgaattttacagacgttcatcaaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    |||||||||| ||||||| |  |||||| ||||||||||||||||| |||||||||||||||| | |||||||| ||| ||||||||||||||||    
T  35693441 gaattttgcggaatatctctaattagtccctgaattttacagacgtccatcaaaatggtccctccatccaaaagttctgttagtggtgatgatgt 35693347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 446 - 532
Target Start/End: Original strand, 34775001 - 34775087
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||||||||| |||||||||||||||| ||||||||| |||||| || || ||||||||| ||||| |||||||||| ||||||||    
T  34775001 taatatctcaaattcgtctttgaattttaaaaaatcggtcaaattcattcatgaattttgcaaaatagctatttagtccctgaattt 34775087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 446 - 590
Target Start/End: Original strand, 56333 - 56477
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||| ||||| |||||| ||||||||| |||||||||| || ||  |||  ||||||||||||||||| | |||||| ||||||||||||||||| |||    
T  56333 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccat 56432  T
Q  546 caaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    |||     ||||| |||||||||  ||| ||||| ||||||||||    
T  56433 caattcactccctccgtccaaaatgtctgttagtagtgatgatgt 56477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 440 - 532
Target Start/End: Complemental strand, 48228033 - 48227941
Alignment:
Q  440 aatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||||||||| ||||| |||||||||||||||| ||||||||| ||||||  ||   |||||||||||||||||||||| ||| ||||||||    
T  48228033 aatgattaatacctcaaattcgtctttgaattttaaaaaatcggtcaaattcgtctttgaattttgcgaaatatctattttgtccctgaattt 48227941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 442 - 532
Target Start/End: Original strand, 39857644 - 39857734
Alignment:
Q  442 tgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||||||| ||||| |||||| ||||||||| ||||||||| ||||||  |||  |||||||||||||||||||||||||| | ||||||    
T  39857644 tgattaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtcccagaattt 39857734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 38 - 142
Target Start/End: Original strand, 24225003 - 24225107
Alignment:
Q  38 gagggtttggattgtgagggtggtgtcgatggtgatggagtaggtgttgtgggtgtcgtaggggaggtggttgtcgaagagggtgatgttgaagggtgat 137  Q
    ||||| ||||||||||| ||||| ||||| ||||||||||||||||| |||||| ||||  ||||||| |||||||| || |||||| |||| ||| | |    
T  24225003 gagggattggattgtgaaggtggagtcgaaggtgatggagtaggtgtcgtgggtatcgtgagggaggttgttgtcgatgatggtgattttgatgggagtt 24225102  T
Q  138 ggtgt 142  Q
    |||||    
T  24225103 ggtgt 24225107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 442 - 532
Target Start/End: Complemental strand, 6605487 - 6605397
Alignment:
Q  442 tgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||||||| ||||| || ||| ||||||||| ||||||||| ||||||| | |  ||||||||||||||| |||||||||| ||||||||    
T  6605487 tgattaatacctcaaatttgtccttgaattttaaaaaatcggtcaaatttgttcctgaattttgcgaaatagctatttagtccctgaattt 6605397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 446 - 532
Target Start/End: Complemental strand, 22155933 - 22155847
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| || ||||||||| ||||||||| ||||||||||||||||  |||| ||||||||| ||||| |||||| ||| ||||||||    
T  22155933 taatacctaaacttcgtccttgaattttcaaaaatcggccaaattcgtccatgaattttgcaaaatagctattttgtccctgaattt 22155847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 446 - 532
Target Start/End: Complemental strand, 22211848 - 22211762
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| || ||||||||| ||||||||| ||||||||||||||||  |||| ||||||||| ||||| |||||| ||| ||||||||    
T  22211848 taatacctaaacttcgtccttgaattttcaaaaatcggccaaattcgtccatgaattttgcaaaatagctattttgtccctgaattt 22211762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 446 - 532
Target Start/End: Original strand, 37113944 - 37114030
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| |||||| ||||||||| |||||| || |||||| ||||  |||||||||||||||||||||||||| || |||||    
T  37113944 taatacctcaaattcgtccttgaattttaaaaaattggtcaaattcatccctgaattttgcgaaatatctatttagtccctaaattt 37114030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 440 - 532
Target Start/End: Original strand, 27664427 - 27664519
Alignment:
Q  440 aatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||||||||| ||||| || ||| ||||||||| ||||||||||||| ||| |||  ||||||||| ||||||| | |||||| ||||||||    
T  27664427 aatgattaatacctcaaattagtccttgaattttgaaaaatcggccaattttgtccctgaattttgcaaaatatcaaattagtccctgaattt 27664519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 446 - 566
Target Start/End: Original strand, 13018036 - 13018158
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatat--ctatttagtctctgaattttacagacgttc 543  Q
    ||||| ||||| ||| || ||||||||| ||||||| ||||||||  |||   ||||| |||||||||  ||||||  ||||||||||| ||| |||| |    
T  13018036 taatacctcaaattcatccttgaattttaaaaaatcagccaaattcgtcctcaaatttagcgaaatatatctatttcatctctgaatttaacatacgtcc 13018135  T
Q  544 atcaaaatggtcccttcgtccaa 566  Q
    ||||||||||||||| |||||||    
T  13018136 atcaaaatggtccctccgtccaa 13018158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 446 - 533
Target Start/End: Original strand, 37791657 - 37791744
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaatttt 533  Q
    ||||| || |||||||||||| |||||| ||||||| |||||||| ||||   |||||||| |||||||||||||||| || ||||||    
T  37791657 taatacctaaacttcgtctttaaattttaaaaaatcagccaaattcatccccaaattttgccaaatatctatttagtccctaaatttt 37791744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 446 - 532
Target Start/End: Original strand, 24226584 - 24226670
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||||||  |||  ||||||||||||||| |||||| |||  |||||||    
T  24226584 taatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccttgaattttgcgaaatagctattttgtccttgaattt 24226670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 446 - 532
Target Start/End: Original strand, 35401972 - 35402058
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||||||||| |||||| ||||||||| |||||||||| || ||  |||  ||||||||||||||||| | |||||| ||||||||    
T  35401972 taatatctcaaattcgtccttgaattttgaaaaatcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 35402058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 446 - 532
Target Start/End: Complemental strand, 35403705 - 35403619
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||| ||  |||  ||||||||||||||||| | |||||| ||||||||    
T  35403705 taatacctcaaattcgtccttgaattttaaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 35403619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 453 - 566
Target Start/End: Complemental strand, 33038911 - 33038798
Alignment:
Q  453 tcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatg 552  Q
    |||| |||||| |||||||||||    |||| |||||| ||||   |||| ||||||||||| | |||||| ||||||||| ||||||| |||||||| |    
T  33038911 tcaaattcgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttttcagacgtccatcaaaaag 33038812  T
Q  553 gtcccttcgtccaa 566  Q
    |||||| |||||||    
T  33038811 gtccctccgtccaa 33038798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 446 - 523
Target Start/End: Complemental strand, 46439619 - 46439542
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtc 523  Q
    ||||||||||| |||||| ||||||||||||||||||  |||| || ||    |||||||||||||||||||||||||    
T  46439619 taatatctcaaattcgtcattgaatttttaaaaatcgatcaaacttgtctttaaattttgcgaaatatctatttagtc 46439542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 465 - 568
Target Start/End: Original strand, 20478064 - 20478167
Alignment:
Q  465 ttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtcc 564  Q
    ||||||||| ||||||||||||| ||  | |  ||||||| ||||||||| | |||||| ||||||||| ||||||| |||||||   |||||| |||||    
T  20478064 ttgaattttgaaaaatcggccaatttcgtacctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtcc 20478163  T
Q  565 aaaa 568  Q
    ||||    
T  20478164 aaaa 20478167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 446 - 532
Target Start/End: Complemental strand, 78100 - 78014
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| |||||||||||||||| ||||||||||||| ||  |||  ||||||||| ||||||| | || ||| ||||||||    
T  78100 taatacctcaaattcgtctttgaattttgaaaaatcggccaatttcgtccctgaattttgcaaaatatcaaatttgtccctgaattt 78014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 446 - 532
Target Start/End: Original strand, 47384297 - 47384383
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| |||||| ||||||||| ||||||  ||||||||  |||  ||||||||||||||||||| |||||| | ||||||    
T  47384297 taatacctcaaattcgtccttgaattttgaaaaatgagccaaattcgtccttgaattttgcgaaatatctaattagtccccgaattt 47384383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 528 - 572
Target Start/End: Complemental strand, 23906300 - 23906256
Alignment:
Q  528 aattttacagacgttcatcaaaatggtcccttcgtccaaaagctc 572  Q
    |||||||||| ||| |||||||||||||||| |||||||||||||    
T  23906300 aattttacagtcgtccatcaaaatggtccctccgtccaaaagctc 23906256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 450 - 533
Target Start/End: Complemental strand, 13039724 - 13039641
Alignment:
Q  450 atctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaatttt 533  Q
    ||||||| |||||| ||||||||| |||||||   ||||||  |||   |||||||||||||| |||||||||| |||||||||    
T  13039724 atctcaagttcgtccttgaattttcaaaaatcaatcaaattcgtccctaaattttgcgaaataactatttagtccctgaatttt 13039641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 499 - 566
Target Start/End: Complemental strand, 46996770 - 46996703
Alignment:
Q  499 aattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtccaa 566  Q
    |||| ||||||||||| | |||||| ||||||||  ||||||| |||||||| ||||||| |||||||    
T  46996770 aattatgcgaaatatcaacttagtcactgaatttgtcagacgtccatcaaaaaggtccctccgtccaa 46996703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 532
Target Start/End: Original strand, 46437110 - 46437196
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| |||||| ||||||||| ||||||| ||||||||  ||   ||||||||||||||| |||||| |||  |||||||    
T  46437110 taatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtcgttgaattttgcgaaatagctattttgtccttgaattt 46437196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 453 - 555
Target Start/End: Complemental strand, 46812696 - 46812594
Alignment:
Q  453 tcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatg 552  Q
    ||||||||||| |||||||||||  | ||||||||||| ||||   ||||  | |||||||| |||||||| || |||||  ||||||| |||||||| |    
T  46812696 tcaacttcgtccttgaatttttacgagtcggccaaattcatccctcaattacgtgaaatatcaatttagtccctaaatttgtcagacgtccatcaaaaag 46812597  T
Q  553 gtc 555  Q
    |||    
T  46812596 gtc 46812594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 440 - 532
Target Start/End: Complemental strand, 20479811 - 20479719
Alignment:
Q  440 aatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| |||||  | ||| ||||||||| ||||||||||||| ||  |||  ||||||| ||||||||| | |||||| ||||||||    
T  20479811 aatgactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 20479719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 499 - 567
Target Start/End: Original strand, 40784402 - 40784470
Alignment:
Q  499 aattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtccaaa 567  Q
    |||| ||||||||||| | ||||||| |||||||  ||||| | |||||||| ||||||| ||||||||    
T  40784402 aattatgcgaaatatcaacttagtctttgaatttgtcagacatccatcaaaaaggtccctccgtccaaa 40784470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 93; Significance: 5e-45; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 438 - 590
Target Start/End: Complemental strand, 41761875 - 41761723
Alignment:
Q  438 ataatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacag 537  Q
    ||||||||||||| ||||| |||||| ||||||||| ||||||||||||||||  |||   ||||||||||||||||||||||||| |||||||||||||    
T  41761875 ataatgattaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtcccgaaattttgcgaaatatctatttagtccctgaattttacag 41761776  T
Q  538 acgttcatcaaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    |||| |||||||||||||||| ||||||||||||   ||||||||||||||||    
T  41761775 acgtccatcaaaatggtccctccgtccaaaagcttcgttagtggtgatgatgt 41761723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 446 - 587
Target Start/End: Original strand, 51011929 - 51012070
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||||||||| |||||| ||||||||| ||||||||| ||||||  | |  |||||||||||||||||||||||||||||||||||||||||||| |||    
T  51011929 taatatctcaaattcgtccttgaattttaaaaaatcggtcaaattctttcttgaattttgcgaaatatctatttagtctctgaattttacagacgtccat 51012028  T
Q  546 caaaatggtcccttcgtccaaaagctctattagtggtgatga 587  Q
    ||||||||||||| |||||||||||||| ||||| |||||||    
T  51012029 caaaatggtccctccgtccaaaagctctgttagtagtgatga 51012070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 446 - 590
Target Start/End: Original strand, 49523127 - 49523271
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||| ||||| |||||| ||||||||| |||||||||| |||||  |||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  49523127 taatacctcaaattcgtcattgaattttaaaaaatcggctaaattcgtccatgaattttgcgaaatatctatttagtccctgaattttacagacgttcat 49523226  T
Q  546 caaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    ||||||||||||| |||||||||  ||  ||||||||||||||||    
T  49523227 caaaatggtccctccgtccaaaaaatccgttagtggtgatgatgt 49523271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 446 - 590
Target Start/End: Original strand, 48813790 - 48813934
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||| ||||| |||||| ||||||||| ||||||| |||||||||||||  ||||||||| |||||| ||||||||  |||||||||| |||||| |||    
T  48813790 taatacctcaaattcgtccttgaattttcaaaaatcagccaaatttatccctgaattttgcaaaatatatatttagttcctgaattttatagacgtccat 48813889  T
Q  546 caaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    |||||||||||||||||||||||||||| || |||||||||||||    
T  48813890 caaaatggtcccttcgtccaaaagctctgttggtggtgatgatgt 48813934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 438 - 590
Target Start/End: Original strand, 41781534 - 41781686
Alignment:
Q  438 ataatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacag 537  Q
    ||||||| ||||| ||||| || ||  ||||||||| ||||||||| ||||||| |||  ||||||||| |||||| ||||||||| |||||||||||||    
T  41781534 ataatgactaatacctcaaatttgttcttgaattttaaaaaatcggtcaaatttgtccctgaattttgcaaaatatttatttagtccctgaattttacag 41781633  T
Q  538 acgttcatcaaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    || | |||||||||||||||| |||||||||||||  |||||| |||||||||    
T  41781634 acatccatcaaaatggtccctccgtccaaaagctccgttagtgatgatgatgt 41781686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 482 - 590
Target Start/End: Original strand, 42980674 - 42980782
Alignment:
Q  482 ggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtccaaaagctctattagtgg 581  Q
    |||||||||| |||| ||||||| |||||| ||||||||||| || |||||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  42980674 ggccaaatttgtccatgaattttacgaaatttctatttagtcccttaattttacagacgtccatcaaaatggtccctccgtccaaaagctctgttagtgg 42980773  T
Q  582 tgatgatgt 590  Q
    |||||||||    
T  42980774 tgatgatgt 42980782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 446 - 590
Target Start/End: Complemental strand, 2693373 - 2693230
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||| |||||||||||||||||||||| ||||||| ||||||||||| |   |||||||||||||||||||||||||| ||||||||| | | || |||    
T  2693373 taatacctcaacttcgtctttgaattttaaaaaatcagccaaatttattcctaaattttgcgaaatatctatttagtctttgaatttta-aaatgtccat 2693275  T
Q  546 caaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    ||||||||||| | |||||| ||| || ||||||| |||||||||    
T  2693274 caaaatggtccatccgtccataagttccattagtgatgatgatgt 2693230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 465 - 587
Target Start/End: Complemental strand, 52868251 - 52868129
Alignment:
Q  465 ttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtcc 564  Q
    ||||||||| ||||||||| ||||||  || |  |||||||||||||||||||||||||||||||||| |||||||   |||||||||||| ||||||||    
T  52868251 ttgaattttaaaaaatcggtcaaattcgtctataaattttgcgaaatatctatttagtctctgaatttaacagacgcctatcaaaatggtcacttcgtcc 52868152  T
Q  565 aaaagctctattagtggtgatga 587  Q
    ||||||||  ||||||| |||||    
T  52868151 aaaagctccgttagtggcgatga 52868129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 465 - 590
Target Start/End: Complemental strand, 48646849 - 48646724
Alignment:
Q  465 ttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtcc 564  Q
    ||||||||| |||| || || |||||  |||  |||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||| | |||||    
T  48646849 ttgaattttcaaaagtcagctaaattcgtccttgaatttagcgaaatatctatttagtccctgaattttacagaccttcatcaaaatggtccttccgtcc 48646750  T
Q  565 aaaagctctattagtggtgatgatgt 590  Q
    |||||||   ||||||||||||||||    
T  48646749 aaaagcttcgttagtggtgatgatgt 48646724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 465 - 587
Target Start/End: Complemental strand, 35404547 - 35404425
Alignment:
Q  465 ttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtcc 564  Q
    ||||||||| |||||||||| |||||  |||   ||||||||||||||| |||||| || ||||||||||||||||| || ||||||||||| | |||||    
T  35404547 ttgaattttaaaaaatcggctaaattcgtccttcaattttgcgaaatatttatttaatccctgaattttacagacgtccaacaaaatggtccatccgtcc 35404448  T
Q  565 aaaagctctattagtggtgatga 587  Q
    ||||||||  |||||||||||||    
T  35404447 aaaagctccgttagtggtgatga 35404425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 446 - 590
Target Start/End: Original strand, 43519427 - 43519571
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||| ||  |||  ||||||||||||||||| | |||||| |||||||||||| |||| |||    
T  43519427 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaaacgtccat 43519526  T
Q  546 caaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    ||||   |||||| |||||||||| || |||| | ||||||||||    
T  43519527 caaatccgtccctccgtccaaaaggtccattaatagtgatgatgt 43519571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 446 - 532
Target Start/End: Original strand, 39345567 - 39345653
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    |||||| |||| |||||| ||||||||| ||||||||||||||||  |||  ||||||||||||||| |||||||||| ||||||||    
T  39345567 taatatttcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatagctatttagtccctgaattt 39345653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 440 - 571
Target Start/End: Original strand, 11601668 - 11601798
Alignment:
Q  440 aatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagac 539  Q
    ||||| ||||| || || |||||  ||||||||| ||||||| | |||||||||||   |||||||| |||||| |||| |||| |||||||||||||||    
T  11601668 aatgagtaatacctaaaattcgttcttgaattttcaaaaatcagtcaaatttatccccaaattttgcaaaatatatatt-agtccctgaattttacagac 11601766  T
Q  540 gttcatcaaaatggtcccttcgtccaaaagct 571  Q
    || ||||||||| ||||||  ||||| |||||    
T  11601767 gtccatcaaaatagtccctctgtccacaagct 11601798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 446 - 532
Target Start/End: Original strand, 35401752 - 35401838
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||||||  |||  |||||||| |||||||||||||||||  |||||||    
T  35401752 taatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgtgaaatatctatttagtccttgaattt 35401838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 446 - 523
Target Start/End: Original strand, 48645258 - 48645335
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtc 523  Q
    ||||| ||||| |||||| ||||||||| ||||||| | ||||||  |||| ||||||||||||||||||||||||||    
T  48645258 taatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccatgaattttgcgaaatatctatttagtc 48645335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 440 - 532
Target Start/End: Original strand, 20493824 - 20493916
Alignment:
Q  440 aatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| ||||| |||||| ||||||||| ||| ||||||||||||  | |  |||||||||||||||||||||||||  ||||||||    
T  20493824 aatgactaatacctcaaattcgtcattgaattttaaaatatcggccaaattcgttcttgaattttgcgaaatatctatttagttcctgaattt 20493916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 446 - 533
Target Start/End: Original strand, 2691377 - 2691463
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaatttt 533  Q
    ||||| ||||||||| |||| ||||||| ||||||| ||||||||  ||||  |||||||| |||||||||||||||| |||||||||    
T  2691377 taatacctcaacttcatctt-gaattttcaaaaatcagccaaattcgtccacaaattttgcaaaatatctatttagtccctgaatttt 2691463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 446 - 533
Target Start/End: Original strand, 20819988 - 20820075
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaatttt 533  Q
    ||||| |||||||||||| ||||||||| ||||||| | ||||||||| |   |||||||| |||||| ||||||||| |||||||||    
T  20819988 taatacctcaacttcgtccttgaattttcaaaaatcagtcaaatttattcctaaattttgcaaaatatttatttagtccctgaatttt 20820075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 441 - 532
Target Start/End: Original strand, 43507165 - 43507256
Alignment:
Q  441 atgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    |||| ||||| ||||| |||||| ||||||||| ||||||||||||| ||  |||  ||||||||||||||||| | |||||| ||||||||    
T  43507165 atgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 43507256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 480 - 558
Target Start/End: Complemental strand, 2350594 - 2350516
Alignment:
Q  480 tcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtccct 558  Q
    |||||||||||| |||   |||| ||||||||||| ||||| |||||||||||  |||||||||||||||| |||||||    
T  2350594 tcggccaaatttgtccctcaattatgcgaaatatcaatttaatctctgaatttatcagacgttcatcaaaaaggtccct 2350516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 446 - 532
Target Start/End: Complemental strand, 4173826 - 4173740
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||| ||  |||  ||||||||||||||||| | |||||| ||||||||    
T  4173826 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 4173740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 446 - 532
Target Start/End: Complemental strand, 43508739 - 43508653
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||| ||  |||  ||||||||||||||||| | |||||| ||||||||    
T  43508739 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 43508653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 446 - 523
Target Start/End: Complemental strand, 320986 - 320909
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtc 523  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||| || ||||  ||||||||||||||||| | ||||||    
T  320986 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccttgaattttgcgaaatatcaaattagtc 320909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 453 - 566
Target Start/End: Complemental strand, 44558607 - 44558494
Alignment:
Q  453 tcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatg 552  Q
    ||||||||||| ||||||||| |    ||||||||||| ||||   |||| ||||||||||| | |||||| ||||||||  ||||||| |||||||| |    
T  44558607 tcaacttcgtccttgaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 44558508  T
Q  553 gtcccttcgtccaa 566  Q
    |||| | |||||||    
T  44558507 gtccttccgtccaa 44558494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 532
Target Start/End: Original strand, 319276 - 319362
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| |||||| ||||||||| ||||||||| ||| ||  |||  ||||||||||||||||| | |||||  ||||||||    
T  319276 taatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagttcctgaattt 319362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 489
Target Start/End: Original strand, 11254123 - 11254165
Alignment:
Q  447 aatatctcaacttcgtctttgaatttttaaaaatcggccaaat 489  Q
    |||| ||||| |||||| |||||||||||||||||||||||||    
T  11254123 aatacctcaaattcgtccttgaatttttaaaaatcggccaaat 11254165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 532
Target Start/End: Complemental strand, 33266096 - 33266010
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||||||||| |||||  ||||||||| |||||||||| || ||  | |  ||||||||||||||||| | |||||| ||||||||    
T  33266096 taatatctcaaattcgttcttgaattttgaaaaatcggctaatttcgttcctgaattttgcgaaatatcaaattagtccctgaattt 33266010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 514
Target Start/End: Complemental strand, 4520532 - 4520471
Alignment:
Q  453 tcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatc 514  Q
    ||||||||||| |||||||||||  | ||||||||||| |||||  |||| |||||||||||    
T  4520532 tcaacttcgtccttgaatttttatgagtcggccaaattcatccatcaattatgcgaaatatc 4520471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 93; Significance: 5e-45; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 446 - 590
Target Start/End: Original strand, 2869582 - 2869726
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||| ||||| |||||| ||||||||| ||||||||| ||||||  |||  ||||||||||||||||||||||||||||| |||||||||||||| |||    
T  2869582 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtctctaaattttacagacgtccat 2869681  T
Q  546 caaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||    
T  2869682 caaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 2869726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 446 - 587
Target Start/End: Complemental strand, 31238616 - 31238475
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||| ||||| || ||| ||||||||| ||||||||||||||||| |||  |||||||||||||||||||||||||| ||||||||||||||||| |||    
T  31238616 taatacctcaaatttgtccttgaattttaaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 31238517  T
Q  546 caaaatggtcccttcgtccaaaagctctattagtggtgatga 587  Q
    ||||||||||| |  ||||||||||||  |||||||||||||    
T  31238516 caaaatggtccatctgtccaaaagctccgttagtggtgatga 31238475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 446 - 587
Target Start/End: Original strand, 37344345 - 37344486
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||| ||||| |||||| ||||||||| ||||||||| ||||||  |||  ||||||||||||||| ||||||||||| ||||||||||| |||| |||    
T  37344345 taatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatacctatttagtctttgaattttacatacgtccat 37344444  T
Q  546 caaaatggtcccttcgtccaaaagctctattagtggtgatga 587  Q
    ||||||||||||| |||||||||||||  |||||||||||||    
T  37344445 caaaatggtccctccgtccaaaagctccgttagtggtgatga 37344486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 446 - 590
Target Start/End: Original strand, 27087286 - 27087430
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||| ||||| |||||| || |||||| ||||||||| ||||||| |||  |||||||||||||||||||||||||| |||||||||||| |||| |||    
T  27087286 taatacctcaaattcgtccttaaattttaaaaaatcggtcaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacaaacgtccat 27087385  T
Q  546 caaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    |||||||| || | |||||||||||||  ||||||||||||||||    
T  27087386 caaaatggcccatccgtccaaaagctccgttagtggtgatgatgt 27087430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 446 - 586
Target Start/End: Complemental strand, 50556218 - 50556078
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||||||||| |||||||||||||||| ||||||| | ||||||  ||   |||||||||||||||||||||||||| || ||||||||||||||  ||    
T  50556218 taatatctcaaattcgtctttgaattttaaaaaatcagtcaaattcgtctctgaattttgcgaaatatctatttagtccctaaattttacagacgtctat 50556119  T
Q  546 caaaatggtcccttcgtccaaaagctctattagtggtgatg 586  Q
    ||||||||||||| |||||||||||||  ||||||||||||    
T  50556118 caaaatggtccctccgtccaaaagctccgttagtggtgatg 50556078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 440 - 587
Target Start/End: Complemental strand, 6818805 - 6818658
Alignment:
Q  440 aatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagac 539  Q
    ||||| ||||| ||||| |||||| ||||||||| |||||||||||||| |  |||  | |||| || |||||||||||||||| |||||||||||||||    
T  6818805 aatgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaactcgtccctggatttagcaaaatatctatttagtccctgaattttacagac 6818706  T
Q  540 gttcatcaaaatggtcccttcgtccaaaagctctattagtggtgatga 587  Q
    || |||||||||||||||| |||||||||||||  |||||||||||||    
T  6818705 gtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 6818658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 437 - 587
Target Start/End: Complemental strand, 4856096 - 4855946
Alignment:
Q  437 tataatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttaca 536  Q
    |||| ||| ||||| ||||| |||||| ||||||||| |||||||||||||||   |||  ||||||||||||||||| | |||||| ||||||||||||    
T  4856096 tatattgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttaca 4855997  T
Q  537 gacgttcatcaaaatggtcccttcgtccaaaagctctattagtggtgatga 587  Q
    ||||| |||||||||||||||| |||||||||||||  ||| |||||||||    
T  4855996 gacgtccatcaaaatggtccctccgtccaaaagctccgttaatggtgatga 4855946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 468 - 590
Target Start/End: Complemental strand, 51896251 - 51896129
Alignment:
Q  468 aatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtccaaa 567  Q
    |||||| ||||||| | ||||||| |||  |||||||||||||||||||||||||| |||||||||||||| || ||||||||| |||||| ||||||||    
T  51896251 aattttaaaaaatcagtcaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacagatgtccatcaaaatagtccctccgtccaaa 51896152  T
Q  568 agctctattagtggtgatgatgt 590  Q
    |||||| ||||||||||||||||    
T  51896151 agctctgttagtggtgatgatgt 51896129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 446 - 587
Target Start/End: Complemental strand, 25278489 - 25278348
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||| ||||| |||||| ||||||||| ||||||||| ||||||  |||  ||||||||||||||| ||||||||||  ||||||||||| |||| |||    
T  25278489 taatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatacctatttagtccttgaattttacatacgtccat 25278390  T
Q  546 caaaatggtcccttcgtccaaaagctctattagtggtgatga 587  Q
    ||||||||||||| |||||||||||||  |||||||||||||    
T  25278389 caaaatggtccctccgtccaaaagctccgttagtggtgatga 25278348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 446 - 587
Target Start/End: Complemental strand, 34778259 - 34778118
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||| ||||| |||||| ||||||||| |||||||||||||||   |||  ||||||||||||||||| | |||||| |||||||||||||| || |||    
T  34778259 taatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagatgtccat 34778160  T
Q  546 caaaatggtcccttcgtccaaaagctctattagtggtgatga 587  Q
    ||||||||||||| |||||||||||||  |||||||||||||    
T  34778159 caaaatggtccctccgtccaaaagctccgttagtggtgatga 34778118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 498 - 590
Target Start/End: Original strand, 15104496 - 15104588
Alignment:
Q  498 gaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| | ||||||||||||| |||||||||||||||||    
T  15104496 gaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccttccgtccaaaagctccattagtggtgatgatgt 15104588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 437 - 590
Target Start/End: Complemental strand, 3013606 - 3013447
Alignment:
Q  437 tataatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttaca 536  Q
    |||||||| ||||| ||||| |||||| ||||||||| ||| ||| | ||||||  |||| |||||||||||||||||||||||||| ||||||||||||    
T  3013606 tataatgactaatacctcaaattcgtccttgaattttaaaacatcagtcaaattcgtccatgaattttgcgaaatatctatttagtccctgaattttaca 3013507  T
Q  537 gacgt------tcatcaaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    |||||       ||||||||| |||||| |||||||||||||  ||||||||||||||||    
T  3013506 gacgtccatggacatcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgt 3013447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 438 - 590
Target Start/End: Complemental strand, 46583685 - 46583533
Alignment:
Q  438 ataatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacag 537  Q
    ||||||| ||||| ||||| |||||| ||||||||| ||||||||| ||| ||| |||  ||||||||||||||||| | |||||| |||||||||||||    
T  46583685 ataatgactaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacag 46583586  T
Q  538 acgttcatcaaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    |||| ||||||| | |||||| |||||||||| ||  ||| ||||||||||||    
T  46583585 acgtccatcaaatttgtccctccgtccaaaaggtccgttaatggtgatgatgt 46583533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 443 - 590
Target Start/End: Complemental strand, 33602768 - 33602621
Alignment:
Q  443 gattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgtt 542  Q
    |||||||| ||||| |||||| ||||||||| ||||||||| ||| ||  |||  |||||||| |||||||| | |||||| |||||||||||||||||     
T  33602768 gattaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgtgaaatatcaaattagtccctgaattttacagacgtc 33602669  T
Q  543 catcaaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    | ||||| | |||||| |||||||||| ||  |||||  |||||||||    
T  33602668 cgtcaaattagtccctccgtccaaaaggtccgttagtaatgatgatgt 33602621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 440 - 541
Target Start/End: Complemental strand, 25279080 - 25278979
Alignment:
Q  440 aatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagac 539  Q
    ||||| ||||| ||||| |||||| ||||||||| ||||||| ||||||||  | |   ||||||||||||||||||||||||| |||||||||||||||    
T  25279080 aatgactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgttcctaaattttgcgaaatatctatttagtccctgaattttacagac 25278981  T
Q  540 gt 541  Q
    ||    
T  25278980 gt 25278979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 446 - 532
Target Start/End: Complemental strand, 2871162 - 2871076
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||||||||| |||||| |||||||||||||||||||| |||||  |||  ||||||||||||||| |||||| |||| |||||||    
T  2871162 taatatctcaaattcgtccttgaatttttaaaaatcggctaaattcgtccctgaattttgcgaaatagctattttgtctttgaattt 2871076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 446 - 532
Target Start/End: Original strand, 31236822 - 31236908
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| |||||| ||||||||| ||||||||| ||||||| |||  |||||||||||||||||||||||||  ||||||||    
T  31236822 taatacctcaaattcgtccttgaattttaaaaaatcggtcaaatttgtccctgaattttgcgaaatatctatttagttcctgaattt 31236908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 446 - 532
Target Start/End: Original strand, 25276745 - 25276831
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||| || ||||  ||||||||||||||||| | |||||| ||||||||    
T  25276745 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccttgaattttgcgaaatatcaaattagtccctgaattt 25276831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 443 - 532
Target Start/End: Original strand, 3011855 - 3011944
Alignment:
Q  443 gattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    |||||||| ||||| |||||| || |||||| ||||||| | ||||||  | |  |||||||||||||||||||||||||||||||||||    
T  3011855 gattaatacctcaaattcgtccttaaattttaaaaaatcagtcaaattcgttcctgaattttgcgaaatatctatttagtctctgaattt 3011944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 445 - 590
Target Start/End: Complemental strand, 52643737 - 52643597
Alignment:
Q  445 ttaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttca 544  Q
    |||||| ||||| |||||| || |||||||||||||| |  |||||  |||  |||||||||||||||| ||||||||| |||||||||| | ||||       
T  52643737 ttaatacctcaaattcgtccttaaatttttaaaaatcagttaaattcgtccctgaattttgcgaaatatttatttagtccctgaattttataaacgt--- 52643641  T
Q  545 tcaaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
       | |||||| || |||||||||||||  ||||||||||||||||    
T  52643640 --cagatggtctctccgtccaaaagctccgttagtggtgatgatgt 52643597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 458 - 532
Target Start/End: Original strand, 33599233 - 33599307
Alignment:
Q  458 ttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    |||||| ||||||||| ||||||||| ||||||  |||| ||||||||||||||||| | ||| |||||||||||    
T  33599233 ttcgtccttgaattttgaaaaatcggtcaaattcgtccatgaattttgcgaaatatcaaattaatctctgaattt 33599307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 446 - 532
Target Start/End: Complemental strand, 37346048 - 37345962
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| |||||| ||||||||| |||||||| |||| || ||||  ||||||||||||||||| | |||||| ||||||||    
T  37346048 taatacctcaaattcgtccttgaattttgaaaaatcgaccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattt 37345962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 446 - 523
Target Start/End: Original strand, 25278857 - 25278934
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtc 523  Q
    ||||| ||||| ||| || ||||||||| ||||||| | ||||||| |||  ||||||||||||||||||||||||||    
T  25278857 taatacctcaaattcatccttgaattttcaaaaatcagtcaaatttgtccctgaattttgcgaaatatctatttagtc 25278934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 446 - 523
Target Start/End: Original strand, 52641891 - 52641968
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtc 523  Q
    ||||| ||||| |||||| ||||||||| ||||||| ||||||||  |||  |||||||||||||||| |||||||||    
T  52641891 taatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctgaattttgcgaaatatatatttagtc 52641968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 465 - 568
Target Start/End: Complemental strand, 9121770 - 9121667
Alignment:
Q  465 ttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtcc 564  Q
    ||||||||| ||||||||||||| ||  |||   |||||| ||||||||| | |||||| ||||||||| ||||||| |||||||   |||||| |||||    
T  9121770 ttgaattttgaaaaatcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtcc 9121671  T
Q  565 aaaa 568  Q
    ||||    
T  9121670 aaaa 9121667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 499 - 566
Target Start/End: Complemental strand, 36895578 - 36895511
Alignment:
Q  499 aattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtccaa 566  Q
    |||| ||||||||||| | |||||| ||||||||  ||||||| |||||||| |||||||||||||||    
T  36895578 aattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtcccttcgtccaa 36895511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 446 - 532
Target Start/End: Original strand, 26223590 - 26223676
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| |||||| ||||||||| ||||||||| ||| ||  |||  ||||||||||||||||| | |||||| ||||||||    
T  26223590 taatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 26223676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 446 - 532
Target Start/End: Original strand, 34776572 - 34776658
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||| ||  |||  ||||||| ||||||||| | |||||| ||||||||    
T  34776572 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 34776658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 446 - 532
Target Start/End: Original strand, 46582013 - 46582099
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| || ||| ||||||||| ||||||||||||| ||  |||  ||||||||||||||||| | |||||| ||||||||    
T  46582013 taatacctcaaatttgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 46582099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 438 - 519
Target Start/End: Complemental strand, 37088230 - 37088149
Alignment:
Q  438 ataatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctattt 519  Q
    ||||||| ||||| ||||| ||| || ||||||||| ||||||||||||||||  | |  ||||||||||||||| ||||||    
T  37088230 ataatgactaatacctcaaattcttccttgaattttaaaaaatcggccaaattcgttcctgaattttgcgaaatagctattt 37088149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 453 - 566
Target Start/End: Original strand, 42134492 - 42134605
Alignment:
Q  453 tcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatg 552  Q
    |||| |||||| |||||||||||    ||||||||| | ||||   |||| ||||||||||| | |||||| ||||||||  ||||||| |||||||| |    
T  42134492 tcaaattcgtccttgaatttttacgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 42134591  T
Q  553 gtcccttcgtccaa 566  Q
    |||||| |||||||    
T  42134592 gtccctccgtccaa 42134605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 499 - 580
Target Start/End: Original strand, 51121961 - 51122042
Alignment:
Q  499 aattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtccaaaagctctattagtg 580  Q
    |||||||| ||||||| |||| ||| ||||||||  |  |||| |||||||||||||||| |||||||||| ||| ||||||    
T  51121961 aattttgcaaaatatcaatttcgtccctgaatttctctcacgtccatcaaaatggtccctccgtccaaaaggtctgttagtg 51122042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 443 - 532
Target Start/End: Original strand, 51894567 - 51894656
Alignment:
Q  443 gattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||||||  |||| |||||  ||||||||| |||||| || ||||||| ||   |||||||||||||||| ||||||||| ||||||||    
T  51894567 gattaatacatcaaattcgttcttgaattttaaaaaatgggtcaaatttgtctctgaattttgcgaaatatatatttagtccctgaattt 51894656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 446 - 530
Target Start/End: Original strand, 8167945 - 8168029
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaat 530  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||| ||  ||   ||||||||||||||||| | |||||| ||||||    
T  8167945 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtctctgaattttgcgaaatatcaaattagtccctgaat 8168029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 453 - 560
Target Start/End: Complemental strand, 18184057 - 18183950
Alignment:
Q  453 tcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatg 552  Q
    |||| ||||||||||||||||||    ||||||||| | ||||   |||| ||||||||||| | |||||| ||||||||  ||||||| ||||||||      
T  18184057 tcaaattcgtctttgaatttttacggttcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaat 18183958  T
Q  553 gtcccttc 560  Q
    ||||||||    
T  18183957 gtcccttc 18183950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 532
Target Start/End: Complemental strand, 8169654 - 8169568
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||| ||  |||  ||||||| | ||||||| | |||||| ||||||||    
T  8169654 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacaaaatatcaaattagtccctgaattt 8169568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 566
Target Start/End: Complemental strand, 35480089 - 35479976
Alignment:
Q  453 tcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatg 552  Q
    ||||||||||| ||||||||| |   ||| |||||||| ||||   |||| ||||||||||| | ||| ||| |||||||  ||||||| |||||||| |    
T  35480089 tcaacttcgtccttgaattttcacggatcagccaaattcatccctcaattatgcgaaatatcaacttaatctatgaatttgtcagacgtccatcaaaaag 35479990  T
Q  553 gtcccttcgtccaa 566  Q
    |||| | |||||||    
T  35479989 gtccttccgtccaa 35479976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 8e-44; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 440 - 590
Target Start/End: Complemental strand, 39664895 - 39664745
Alignment:
Q  440 aatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagac 539  Q
    ||||| ||||| ||||| |||||| ||||||||| ||||||||||||||||  |||  ||||||| |||||||||||||||||| |||||||||||||||    
T  39664895 aatgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccccgaattttacgaaatatctatttagtccctgaattttacagac 39664796  T
Q  540 gttcatcaaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    || |||||||||||||||| |||||||||||||  ||||||||||||||||    
T  39664795 gtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 39664745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 440 - 587
Target Start/End: Original strand, 16763073 - 16763220
Alignment:
Q  440 aatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagac 539  Q
    ||||| ||||| ||||| |||||| ||||||||||||||||||| ||||||  |||  |||||||||||||||||||||||||| |||||||||||||||    
T  16763073 aatgactaatacctcaaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagac 16763172  T
Q  540 gttcatcaaaatggtcccttcgtccaaaagctctattagtggtgatga 587  Q
    || |||||||||||||||| ||||||||| |||| ||||||| |||||    
T  16763173 gtccatcaaaatggtccctccgtccaaaatctctgttagtggcgatga 16763220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 453 - 590
Target Start/End: Original strand, 40560233 - 40560370
Alignment:
Q  453 tcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatg 552  Q
    |||| |||||||||||||||| ||||||| ||||||||  |||  |||||||||||||||||||||||||| ||||||||||||||||| |||||||||     
T  40560233 tcaaattcgtctttgaattttaaaaaatcagccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaata 40560332  T
Q  553 gtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    |||||| |||||||||| ||| ||||||||||||||||    
T  40560333 gtccctccgtccaaaagttctgttagtggtgatgatgt 40560370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 440 - 590
Target Start/End: Original strand, 2766931 - 2767081
Alignment:
Q  440 aatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagac 539  Q
    ||||| ||||| ||||| |||||| ||||||||||||||||||| |||| |  |||  |||||||||||||||||||||||||| |||||||||||||||    
T  2766931 aatgactaatagctcaaattcgtccttgaatttttaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacagac 2767030  T
Q  540 gttcatcaaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    ||  |||||||||||||||  ||||||||||||  ||||||||||||||||    
T  2767031 gtctatcaaaatggtccctctgtccaaaagctccgttagtggtgatgatgt 2767081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 443 - 590
Target Start/End: Original strand, 17696206 - 17696353
Alignment:
Q  443 gattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgtt 542  Q
    |||||||| ||||| |||||| ||||||||| |||||||||||||||| ||||  ||||||||  |||||||||||||||| |||||||||||| ||||     
T  17696206 gattaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcatccctgaattttggaaaatatctatttagtccctgaattttacaaacgtc 17696305  T
Q  543 catcaaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
     |||||||||||| || |||||||||||||  ||||||||||||||||    
T  17696306 aatcaaaatggtcactccgtccaaaagctccgttagtggtgatgatgt 17696353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 446 - 587
Target Start/End: Complemental strand, 19908388 - 19908246
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaa-tcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttca 544  Q
    ||||| ||||| |||||| ||||||||| ||||| |||||||||||  |||  ||||||||||||||||||||||||||  |||||||||||||||| |     
T  19908388 taatacctcaaattcgtccttgaattttaaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattttacagacgtccg 19908289  T
Q  545 tcaaaatggtcccttcgtccaaaagctctattagtggtgatga 587  Q
    |||||||||||||| |||||||||||||  |||||||||||||    
T  19908288 tcaaaatggtccctccgtccaaaagctccgttagtggtgatga 19908246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 446 - 588
Target Start/End: Complemental strand, 44709886 - 44709744
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||| ||||| |||||| ||||||||| ||||| ||||||||||   ||  ||||||||||||||| |||||||||| ||||||||||||||||| |||    
T  44709886 taatacctcaaattcgtccttgaattttaaaaaaccggccaaattcggccctgaattttgcgaaataactatttagtccctgaattttacagacgtccat 44709787  T
Q  546 caaaatggtcccttcgtccaaaagctctattagtggtgatgat 588  Q
    ||||||||||||| ||||||||||||   ||||||||||||||    
T  44709786 caaaatggtccctccgtccaaaagcttcgttagtggtgatgat 44709744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 441 - 590
Target Start/End: Complemental strand, 14389230 - 14389081
Alignment:
Q  441 atgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacg 540  Q
    |||| ||||| ||||| |||||| ||||||||| ||||||||||||||||  |||  |||||||||||||||||||||||||| ||||||||| || | |    
T  14389230 atgactaatacctcaaattcgtcattgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttccaaatg 14389131  T
Q  541 ttcatcaaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    | |||||||||||||||| |||||||||| |   ||||| ||||||||||    
T  14389130 tccatcaaaatggtccctccgtccaaaagtttcgttagtagtgatgatgt 14389081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 447 - 590
Target Start/End: Complemental strand, 42519346 - 42519202
Alignment:
Q  447 aatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaatttt-gcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    |||| ||||| |||||| ||||||||| |||||| |  ||||||  |||  ||||||| || |||||||||||||||| ||||||||||||||||| |||    
T  42519346 aatacctcaaattcgtccttgaattttaaaaaattgatcaaattagtccttgaatttttgcaaaatatctatttagtccctgaattttacagacgtccat 42519247  T
Q  546 caaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    ||||||||||||| | |||||||||||  ||||||||||||||||    
T  42519246 caaaatggtccctccatccaaaagctccgttagtggtgatgatgt 42519202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 479 - 587
Target Start/End: Complemental strand, 16377305 - 16377197
Alignment:
Q  479 atcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtccaaaagctctattag 578  Q
    ||||| ||||||| |||  ||||||||| ||||||||||||||||  ||||||||||| |||| |||||||||||||||| |||||||||||||  ||||    
T  16377305 atcggtcaaatttgtccctgaattttgcaaaatatctatttagtccttgaattttacatacgtccatcaaaatggtccctccgtccaaaagctccgttag 16377206  T
Q  579 tggtgatga 587  Q
    |||||||||    
T  16377205 tggtgatga 16377197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 446 - 590
Target Start/End: Original strand, 39455172 - 39455316
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||||||||| || ||| ||||||||| |||||||||  ||||| |  |  ||||||||| ||||||||||||||||  |||||||||||||||| |||    
T  39455172 taatatctcaaatttgtccttgaattttaaaaaatcggttaaattcagtcctgaattttgcaaaatatctatttagtccatgaattttacagacgtccat 39455271  T
Q  546 caaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    |||||||||| || ||| |||||||||  ||||||| ||||||||    
T  39455272 caaaatggtctctccgttcaaaagctccgttagtggcgatgatgt 39455316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 464 - 590
Target Start/End: Original strand, 6797528 - 6797654
Alignment:
Q  464 tttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtc 563  Q
    |||||||||| |||||| ||| |||||  | |  |||||||||||||||||||||||||| || ||||||||||||||  ||||||||||| ||| ||||    
T  6797528 tttgaattttaaaaaattggctaaattcgttcctgaattttgcgaaatatctatttagtcccttaattttacagacgtctatcaaaatggttcctccgtc 6797627  T
Q  564 caaaagctctattagtggtgatgatgt 590  Q
    |||||||||| |||  |||||||||||    
T  6797628 caaaagctctgttacgggtgatgatgt 6797654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 454 - 590
Target Start/End: Original strand, 37645498 - 37645634
Alignment:
Q  454 caacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatgg 553  Q
    |||||||||| ||||||||||||||||| | | ||||  |||   ||||||  |||||||||||||||||  |||||||| |||| ||| |||||||| |    
T  37645498 caacttcgtccttgaatttttaaaaatcagtcgaattcgtccttaaattttaggaaatatctatttagtccttgaattttgcagatgtttatcaaaattg 37645597  T
Q  554 tcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    ||||| |||||| ||||||| ||| || |||||||||    
T  37645598 tccctccgtccataagctctgttattgatgatgatgt 37645634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 443 - 532
Target Start/End: Complemental strand, 6799497 - 6799408
Alignment:
Q  443 gattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||||  |||| ||||||||| ||||| |||||| |||  |||||||    
T  6799497 gattaatatctcaaattcgtccttgaatttttaaaaatcggacaaattcgtccatgaattttgccaaatagctattttgtccttgaattt 6799408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 446 - 523
Target Start/End: Original strand, 19581417 - 19581494
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtc 523  Q
    ||||| ||||| |||||| || |||||||||||||| ||||||||| |||  ||||||||||||||||||||||||||    
T  19581417 taatacctcaaattcgtccttaaatttttaaaaatcagccaaatttgtccctgaattttgcgaaatatctatttagtc 19581494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 446 - 532
Target Start/End: Original strand, 16376739 - 16376825
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| |||||||||||||||| ||||||||| ||||||  |||  ||||||| ||||||| |||||||||| ||||||||    
T  16376739 taatacctcaaattcgtctttgaattttaaaaaatcggtcaaattcgtccctgaattttacgaaatagctatttagtccctgaattt 16376825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 499 - 579
Target Start/End: Original strand, 15432384 - 15432464
Alignment:
Q  499 aattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtccaaaagctctattagt 579  Q
    |||| ||||||||||| |||||||||||||||||  ||||||| |||||||| ||| | |||||||||  |||||||||||    
T  15432384 aattatgcgaaatatcaatttagtctctgaatttgtcagacgtccatcaaaaaggttcattcgtccaagtgctctattagt 15432464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 443 - 523
Target Start/End: Original strand, 19906682 - 19906762
Alignment:
Q  443 gattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtc 523  Q
    |||||||| || || |||||| ||||||||| ||||||||| ||||||  |||  ||||||||||||||||||||||||||    
T  19906682 gattaataccttaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtc 19906762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 465 - 568
Target Start/End: Complemental strand, 24208164 - 24208061
Alignment:
Q  465 ttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtcc 564  Q
    ||||||||| ||||||||||||| ||  |||  ||||| | ||||||||| | |||||| ||||||||||||||||| |||||||   |||||| |||||    
T  24208164 ttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtcc 24208065  T
Q  565 aaaa 568  Q
    ||||    
T  24208064 aaaa 24208061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 446 - 532
Target Start/End: Original strand, 34400317 - 34400403
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| ||| || ||||||||| |||||||||||||||| ||||  ||||||||||||||| |||||| |||  |||||||    
T  34400317 taatacctcaaattcatccttgaattttcaaaaatcggccaaattcatccctgaattttgcgaaatagctattttgtccttgaattt 34400403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 480 - 566
Target Start/End: Original strand, 37417310 - 37417396
Alignment:
Q  480 tcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtccaa 566  Q
    ||||||||||| ||||   |||| ||||||||||| | |||||| ||||||||  ||||||| |||||||| |||||||||||||||    
T  37417310 tcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtcccttcgtccaa 37417396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 458 - 532
Target Start/End: Original strand, 39663169 - 39663243
Alignment:
Q  458 ttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    |||||| ||||||||||||||||||| ||||||  |||  ||||||||| ||||| |||||||||| ||||||||    
T  39663169 ttcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcaaaatagctatttagtccctgaattt 39663243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 446 - 532
Target Start/End: Original strand, 14387352 - 14387438
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||| ||  |||  ||||||| ||||||||| | |||||| ||||||||    
T  14387352 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 14387438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 446 - 532
Target Start/End: Complemental strand, 16764697 - 16764611
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| |||||| ||||||||| | ||||||||||| ||  |||  ||||||||||||||||| | |||||| ||||||||    
T  16764697 taatacctcaaattcgtccttgaattttgagaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 16764611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 499 - 566
Target Start/End: Complemental strand, 39465 - 39398
Alignment:
Q  499 aattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtccaa 566  Q
    |||| ||||||||||| | |||||| ||||||||  |||||||||||||||| ||||||  |||||||    
T  39465 aattatgcgaaatatcaacttagtccctgaatttgtcagacgttcatcaaaaaggtccccccgtccaa 39398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 499 - 558
Target Start/End: Complemental strand, 92415 - 92356
Alignment:
Q  499 aattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtccct 558  Q
    |||| ||||||||||| | ||||||| |||||||  |||||||||||||||| |||||||    
T  92415 aattatgcgaaatatcaacttagtctttgaatttgtcagacgttcatcaaaaaggtccct 92356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 465 - 568
Target Start/End: Complemental strand, 6786103 - 6786000
Alignment:
Q  465 ttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtcc 564  Q
    ||||||||| ||||||||||||| ||  |||   |||| |  |||||||| | |||||| ||||||||||||||||| |||||||   |||||| |||||    
T  6786103 ttgaattttgaaaaatcggccaatttcgtcccttaattatttgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtcc 6786004  T
Q  565 aaaa 568  Q
    ||||    
T  6786003 aaaa 6786000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 499 - 566
Target Start/End: Complemental strand, 29909728 - 29909661
Alignment:
Q  499 aattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtccaa 566  Q
    |||| ||||||||||| |||||||| || |||||  ||||||| |||||||| ||||||| |||||||    
T  29909728 aattatgcgaaatatcaatttagtcccttaatttgtcagacgtccatcaaaaaggtccctccgtccaa 29909661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 532
Target Start/End: Complemental strand, 40561964 - 40561878
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| |||||||||||||||| ||||||||||||| ||  ||   |||||||| |||||| | | |||||| ||||||||    
T  40561964 taatacctcaaattcgtctttgaattttgaaaaatcggccaatttcgtctctgaattttgtgaaatagcaaattagtccctgaattt 40561878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 487
Target Start/End: Original strand, 42517561 - 42517602
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaa 487  Q
    ||||| ||||| |||||| |||||||||||||||||||||||    
T  42517561 taatacctcaaattcgtccttgaatttttaaaaatcggccaa 42517602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 3e-43; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 446 - 587
Target Start/End: Original strand, 17574321 - 17574462
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||||||  |||  |||||||||||||||||||||||||| ||||||||||||||||| |||    
T  17574321 taatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 17574420  T
Q  546 caaaatggtcccttcgtccaaaagctctattagtggtgatga 587  Q
    ||||||||||||| |||||||||||||  |||||||||||||    
T  17574421 caaaatggtccctccgtccaaaagctccgttagtggtgatga 17574462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 446 - 590
Target Start/End: Complemental strand, 36057734 - 36057590
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||||||  |||  |||||||||||||||||||||||| | ||||||||||||||||| |||    
T  36057734 taatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagaccctgaattttacagacgtccat 36057635  T
Q  546 caaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    ||||||||||||| |||||||||||||  ||| ||||||||||||    
T  36057634 caaaatggtccctccgtccaaaagctccgttaatggtgatgatgt 36057590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 446 - 590
Target Start/End: Original strand, 34327638 - 34327782
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||| ||||| |||||| |||||||||  ||||| |||||||||  ||   |||||||||||||||||||||||||| ||||||||||||||||| |||    
T  34327638 taatacctcaaattcgtccttgaattttctaaaattggccaaattcgtcgctgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 34327737  T
Q  546 caaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    |||||||||| || |||||||||||||| ||||||||||||||||    
T  34327738 caaaatggtctctccgtccaaaagctctgttagtggtgatgatgt 34327782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 446 - 587
Target Start/End: Original strand, 7267846 - 7267987
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||| ||||| |||||| ||||||||| |||||||| |||||||  ||   |||||||||||||||||||||||||| ||||||||||||||||| |||    
T  7267846 taatacctcaaattcgtccttgaattttaaaaaatcgtccaaattcgtcactgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 7267945  T
Q  546 caaaatggtcccttcgtccaaaagctctattagtggtgatga 587  Q
    ||||||| ||||| |||||||||||||  |||||||||||||    
T  7267946 caaaatgatccctccgtccaaaagctccgttagtggtgatga 7267987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 446 - 587
Target Start/End: Original strand, 2179790 - 2179931
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||| ||||| || ||| ||||||||| ||||||||| ||||||  |||  |||||||| |||||||||||||| || ||||||||||||||| | |||    
T  2179790 taatacctcaaatttgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgtgaaatatctatttaatccctgaattttacagacatccat 2179889  T
Q  546 caaaatggtcccttcgtccaaaagctctattagtggtgatga 587  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  2179890 caaaatggtccctccgtccaaaagctccattagtggtgatga 2179931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 452 - 587
Target Start/End: Complemental strand, 30468395 - 30468260
Alignment:
Q  452 ctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaat 551  Q
    ||||| |||||| ||||||||| |||||| || ||||||  ||    |||||||||||||||||||||||||  |||||||||||||||| |||||||||    
T  30468395 ctcaatttcgtccttgaattttaaaaaattggtcaaattcgtctctcaattttgcgaaatatctatttagtccttgaattttacagacgtccatcaaaat 30468296  T
Q  552 ggtcccttcgtccaaaagctctattagtggtgatga 587  Q
    ||||||| |||||||||||||  |||||||||||||    
T  30468295 ggtccctccgtccaaaagctccgttagtggtgatga 30468260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 440 - 590
Target Start/End: Complemental strand, 24541339 - 24541188
Alignment:
Q  440 aatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagac 539  Q
    ||||| ||||| ||||| |||||| ||||||||| ||||||||||||| ||  |||  ||||||||||||||||| | |||||| |||||||||||||||    
T  24541339 aatgactaatacctcaaattcgtcattgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagac 24541240  T
Q  540 gttcatcaaaatggtc-ccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    || ||||||| |  || ||| |||||||||| ||||||| | ||||||||||    
T  24541239 gtccatcaaattcatctcctccgtccaaaaggtctattaatagtgatgatgt 24541188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 441 - 586
Target Start/End: Original strand, 8539673 - 8539818
Alignment:
Q  441 atgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacg 540  Q
    |||| ||||| ||||| |||||| ||||||||| |||||||   ||||||  | |  |||||||||||||||||||||||||| |||||||||||| |||    
T  8539673 atgactaatacctcaaattcgtccttgaattttgaaaaatcaatcaaattcgttcttgaattttgcgaaatatctatttagtccctgaattttacaaacg 8539772  T
Q  541 ttcatcaaaatggtcccttcgtccaaaagctctattagtggtgatg 586  Q
    | ||||||||| ||| || | |||||||||||  |||||| |||||    
T  8539773 tccatcaaaatagtcgctccatccaaaagctccgttagtgttgatg 8539818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 498 - 590
Target Start/End: Complemental strand, 18625077 - 18624985
Alignment:
Q  498 gaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    |||||||| ||||||||||||||||| ||||||||||||  ||| |||||||||||||| | |||||||||||||  ||||| ||||||||||    
T  18625077 gaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgttagtagtgatgatgt 18624985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 446 - 532
Target Start/End: Complemental strand, 8541357 - 8541271
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||||||  |||  ||||||||||||||||||||||||||  |||||||    
T  8541357 taatacctcaaattcgtcattgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccttgaattt 8541271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 446 - 532
Target Start/End: Complemental strand, 12738822 - 12738736
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||||||  | |  |||||||||||||||||||||||||| ||||||||    
T  12738822 taatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaattt 12738736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 446 - 532
Target Start/End: Complemental strand, 12801645 - 12801559
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||||||  | |  |||||||||||||||||||||||||| ||||||||    
T  12801645 taatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaattt 12801559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 446 - 532
Target Start/End: Original strand, 30463903 - 30463989
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| |||||| ||||||||| ||||||||| ||||||  |||  |||||||||||||||||||||||||| ||||||||    
T  30463903 taatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 30463989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 446 - 590
Target Start/End: Complemental strand, 2854447 - 2854304
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||| ||||| |||||| ||||||||| ||||||||| ||| ||  |||  ||||||| ||||| ||| | |||||| ||||||||||||||||| ||     
T  2854447 taatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaa-atcaaattagtccctgaattttacagacgtccaa 2854349  T
Q  546 caaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    |||| | |||||| |||||||||| || |||| | ||||||||||    
T  2854348 caaattcgtccctccgtccaaaaggtccattaatagtgatgatgt 2854304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 446 - 532
Target Start/End: Complemental strand, 21843078 - 21842992
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| |||||| ||||||||| ||||||||| ||| ||| |||| ||||||||||||||||| | |||||| ||||||||    
T  21843078 taatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccatgaattttgcgaaatatcaaattagtccctgaattt 21842992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 440 - 532
Target Start/End: Complemental strand, 7269538 - 7269446
Alignment:
Q  440 aatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| ||||| |||||||||||||||| |||||||||| || ||  |||  ||||||||||||||||| | |||||| ||||||||    
T  7269538 aatgactaatacctcaaattcgtctttgaattttaaaaaatcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 7269446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 436 - 532
Target Start/End: Complemental strand, 28822186 - 28822090
Alignment:
Q  436 atataatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||||||||||||| ||||| |||||| |||||||||||||||| || ||||||  |||  ||||||||||||||  |||||| |||  |||||||    
T  28822186 atataatgattaatacctcaaattcgtccttgaatttttaaaaataggtcaaattcgtccctgaattttgcgaaattgctattttgtccttgaattt 28822090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 465 - 568
Target Start/End: Complemental strand, 29621883 - 29621780
Alignment:
Q  465 ttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtcc 564  Q
    ||||||||| ||||||||||||| ||  |||  ||||||| ||||||||| | |||||| ||||||||| ||||||| |||||||   |||||| |||||    
T  29621883 ttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtcc 29621784  T
Q  565 aaaa 568  Q
    ||||    
T  29621783 aaaa 29621780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 443 - 534
Target Start/End: Complemental strand, 43492222 - 43492131
Alignment:
Q  443 gattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaatttta 534  Q
    ||||||||  |||| |||||  || |||||| ||||||| ||||| || ||||  |||||||||||||||||||||||||| ||||||||||    
T  43492222 gattaataaatcaaattcgtacttaaattttcaaaaatcagccaagttcatccctgaattttgcgaaatatctatttagtccctgaatttta 43492131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 499 - 565
Target Start/End: Complemental strand, 38178161 - 38178095
Alignment:
Q  499 aattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtcca 565  Q
    |||| ||||||||||| ||||||| |||||||||  ||||||| |||||||| ||||||||||||||    
T  38178161 aattatgcgaaatatcaatttagtatctgaatttgtcagacgtccatcaaaaaggtcccttcgtcca 38178095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 499 - 565
Target Start/End: Complemental strand, 38205385 - 38205319
Alignment:
Q  499 aattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtcca 565  Q
    |||| ||||||||||| ||||||| |||||||||  ||||||| |||||||| ||||||||||||||    
T  38205385 aattatgcgaaatatcaatttagtatctgaatttgtcagacgtccatcaaaaaggtcccttcgtcca 38205319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 446 - 523
Target Start/End: Original strand, 41493847 - 41493924
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtc 523  Q
    ||||| |||||||||||| ||||||||| ||||||| ||||||||  |||   ||||||| |||||||||||||||||    
T  41493847 taatacctcaacttcgtccttgaattttcaaaaatcagccaaattcgtcctcaaattttgtgaaatatctatttagtc 41493924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 525 - 573
Target Start/End: Complemental strand, 15459231 - 15459183
Alignment:
Q  525 ctgaattttacagacgttcatcaaaatggtcccttcgtccaaaagctct 573  Q
    |||||||| |||||||| ||||||||||||||||||||||||| |||||    
T  15459231 ctgaatttaacagacgtccatcaaaatggtcccttcgtccaaatgctct 15459183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 475 - 532
Target Start/End: Complemental strand, 28813822 - 28813765
Alignment:
Q  475 aaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    |||||| |||||||||  |||  |||||||||||||||||||||||||| ||||||||    
T  28813822 aaaaattggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattt 28813765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 465 - 549
Target Start/End: Complemental strand, 42473709 - 42473625
Alignment:
Q  465 ttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaa 549  Q
    ||||||||| ||||||||||||| ||  |||  ||||| | ||||||||| |  ||||| ||||||||||||||||| |||||||    
T  42473709 ttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattttacagacgtccatcaaa 42473625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 499 - 566
Target Start/End: Complemental strand, 18728670 - 18728603
Alignment:
Q  499 aattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtccaa 566  Q
    |||| ||||||||||| | |||||| ||||||||  ||||||| |||||||| ||||||| |||||||    
T  18728670 aattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtccaa 18728603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 465 - 532
Target Start/End: Original strand, 29620160 - 29620227
Alignment:
Q  465 ttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||||||| ||||||||||||| ||  |||  ||||||| ||||||||| | |||||||||||||||    
T  29620160 ttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtctctgaattt 29620227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 499 - 566
Target Start/End: Original strand, 32087570 - 32087637
Alignment:
Q  499 aattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtccaa 566  Q
    |||| ||||||||||| | |||||| || |||||| ||||||| |||||||| ||||||| |||||||    
T  32087570 aattatgcgaaatatcaacttagtcccttaatttttcagacgtccatcaaaaaggtccctccgtccaa 32087637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 532
Target Start/End: Original strand, 2852889 - 2852975
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| |||||| ||||||||| ||||||||| ||| ||  |||  ||||||||||||||||| | |||||  ||||||||    
T  2852889 taatacctcaaattcgtccttgaattttaaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagttcctgaattt 2852975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 566
Target Start/End: Complemental strand, 43318174 - 43318061
Alignment:
Q  453 tcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatg 552  Q
    |||| |||||| |||||||||||    ||||||||| | ||||   |||| ||||||||||| | |||||| ||||||||  ||||||| ||| |||| |    
T  43318174 tcaaattcgtccttgaatttttatgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccataaaaaag 43318075  T
Q  553 gtcccttcgtccaa 566  Q
    |||||| |||||||    
T  43318074 gtccctccgtccaa 43318061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 440 - 532
Target Start/End: Complemental strand, 40782303 - 40782211
Alignment:
Q  440 aatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| |||||  | ||| ||||||||| ||||||||||||| ||  |||  ||||||| ||||||||| | |||||| ||||||||    
T  40782303 aatgactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 40782211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 3e-43; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 446 - 587
Target Start/End: Complemental strand, 2226293 - 2226152
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||||||  |||  |||||||||||||||||||||||||| |||||||||||||||||||||    
T  2226293 taatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgttcat 2226194  T
Q  546 caaaatggtcccttcgtccaaaagctctattagtggtgatga 587  Q
    ||||||| ||||| ||||||||| |||| |||||||||||||    
T  2226193 caaaatgttccctccgtccaaaaactctgttagtggtgatga 2226152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 446 - 587
Target Start/End: Complemental strand, 53190900 - 53190759
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||||||  |||  |||||||||||||||||||||||||| ||||||||||||||||| |||    
T  53190900 taatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 53190801  T
Q  546 caaaatggtcccttcgtccaaaagctctattagtggtgatga 587  Q
    ||||||||||||| |||||||||||||  |||||||||||||    
T  53190800 caaaatggtccctccgtccaaaagctccgttagtggtgatga 53190759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 446 - 590
Target Start/End: Original strand, 21348726 - 21348870
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||| ||||| || ||| ||||||||| ||||||||||||||||  |||  |||||||||||||||||||||||||| ||||||||||||||||| |||    
T  21348726 taatacctcaaatttgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 21348825  T
Q  546 caaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    ||||||||||||| |||||||||||||| ||||||||||| ||||    
T  21348826 caaaatggtccctccgtccaaaagctctgttagtggtgataatgt 21348870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 446 - 590
Target Start/End: Complemental strand, 30600059 - 30599915
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||| ||||| |||||| || |||||||| ||||||||||||||| |||  |||||||||||||||||||||||||| |||||||||| ||||||  ||    
T  30600059 taatacctcaaattcgtccttaaatttttacaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttagagacgtcgat 30599960  T
Q  546 caaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||    
T  30599959 caaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 30599915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 446 - 590
Target Start/End: Original strand, 51684613 - 51684757
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||||||||| |||||| ||||||||| ||||||| |||||||| ||||  ||||||||| ||||||||||||||||  |||||||||||||||| |||    
T  51684613 taatatctcaaattcgtccttgaattttcaaaaatcagccaaattcatccctgaattttgcaaaatatctatttagtccttgaattttacagacgtccat 51684712  T
Q  546 caaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    ||||||||||||| |||||||||||||  ||||||||||||||||    
T  51684713 caaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 51684757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 441 - 587
Target Start/End: Complemental strand, 27899227 - 27899081
Alignment:
Q  441 atgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacg 540  Q
    |||| ||||| ||||| |||||| ||||||||| ||||||||||||||||  |||  |||||||||||||||||||||||||| ||||||||||||||||    
T  27899227 atgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacg 27899128  T
Q  541 ttcatcaaaatggtcccttcgtccaaaagctctattagtggtgatga 587  Q
    | ||| |||||||||||| |||||||||||||  |||||||||||||    
T  27899127 tccataaaaatggtccctccgtccaaaagctccgttagtggtgatga 27899081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 446 - 590
Target Start/End: Original strand, 43765140 - 43765284
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||| ||||| |||||| ||||||||| ||||||||| ||||||  | |  ||||||||||||||||||||||||| |||||||||||||||||| |||    
T  43765140 taatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgttccggaattttgcgaaatatctatttagtttctgaattttacagacgtccat 43765239  T
Q  546 caaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    ||||||||||||| | |||||||||||  ||||||||||||||||    
T  43765240 caaaatggtccctccatccaaaagctccgttagtggtgatgatgt 43765284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 465 - 587
Target Start/End: Complemental strand, 35905834 - 35905712
Alignment:
Q  465 ttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtcc 564  Q
    ||||||||| ||||||||| ||||||  |||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  35905834 ttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatggtccctccgtcc 35905735  T
Q  565 aaaagctctattagtggtgatga 587  Q
    ||||||||   ||||||||||||    
T  35905734 aaaagctccggtagtggtgatga 35905712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 446 - 572
Target Start/End: Original strand, 54898440 - 54898566
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||| ||||| |||||| ||||||||| ||||||||| ||||||  |||  |||||||||||||||||||||||||| |||||||||||||||||||||    
T  54898440 taatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgttcat 54898539  T
Q  546 caaaatggtcccttcgtccaaaagctc 572  Q
    |||||||||| || |||||||||||||    
T  54898540 caaaatggtctctccgtccaaaagctc 54898566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 441 - 590
Target Start/End: Original strand, 42279505 - 42279654
Alignment:
Q  441 atgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacg 540  Q
    |||| ||||| ||||| |||||| ||||||||| ||||||| ||  ||||  ||  |||||||||| |||||||||||||||| ||||||||||||||||    
T  42279505 atgagtaatacctcaaattcgtcattgaattttcaaaaatcagctcaattcgtctcagaattttgcaaaatatctatttagtccctgaattttacagacg 42279604  T
Q  541 ttcatcaaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    |  ||||||||||||||| |||||||||||||| ||||||||||||||||    
T  42279605 tctatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 42279654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 446 - 590
Target Start/End: Original strand, 17515313 - 17515457
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||| ||||| ||| || |||||||||||||||| ||||||||| |||   |||||||||||||||||||||||||| |||||||||||| |||| |||    
T  17515313 taatacctcaaattcttccttgaatttttaaaaattggccaaattcatcgctgaattttgcgaaatatctatttagtccctgaattttacaaacgtccat 17515412  T
Q  546 caaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    |||||||||||||  |||||||| | |  ||||||||||||||||    
T  17515413 caaaatggtccctctgtccaaaatcaccgttagtggtgatgatgt 17515457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 446 - 587
Target Start/End: Original strand, 46112490 - 46112631
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||||||  |    ||||||||| ||||||||||||||||  |||||||||||||||| |||    
T  46112490 taatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgttattgaattttgcaaaatatctatttagtccatgaattttacagacgtccat 46112589  T
Q  546 caaaatggtcccttcgtccaaaagctctattagtggtgatga 587  Q
    ||||||||||||| ||| |||||||| | |||||||||||||    
T  46112590 caaaatggtccctccgttcaaaagctatgttagtggtgatga 46112631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 443 - 587
Target Start/End: Original strand, 2377029 - 2377173
Alignment:
Q  443 gattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgtt 542  Q
    |||||||| ||||| ||||| |||||||||| |||||| | |||||||  |||  ||||||||| ||| || |||||||||||||||||||||||||||     
T  2377029 gattaatacctcaaattcgtttttgaattttcaaaaattgaccaaattcgtccctgaattttgcaaaaaatatatttagtctctgaattttacagacgtc 2377128  T
Q  543 catcaaaatggtcccttcgtccaaaagctctattagtggtgatga 587  Q
    |||||||||||| ||| |||| ||||||||  |||||||||||||    
T  2377129 catcaaaatggttcctccgtctaaaagctccgttagtggtgatga 2377173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 506 - 590
Target Start/End: Complemental strand, 48830887 - 48830803
Alignment:
Q  506 cgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    ||||||||||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||||||| ||||||||||||||||    
T  48830887 cgaaatatctatttagtctttgaattttacggacgtccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 48830803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 465 - 590
Target Start/End: Complemental strand, 23293292 - 23293167
Alignment:
Q  465 ttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtcc 564  Q
    ||||||||  ||||||| ||||||||   ||  ||||||||||||||||||||||||||  ||||||||||| |||| ||||||||| |||||| |||||    
T  23293292 ttgaatttcgaaaaatcagccaaattcgcccttgaattttgcgaaatatctatttagtccatgaattttacaaacgtccatcaaaatagtccctccgtcc 23293193  T
Q  565 aaaagctctattagtggtgatgatgt 590  Q
    ||||||||  ||||||||||||||||    
T  23293192 aaaagctccgttagtggtgatgatgt 23293167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 446 - 571
Target Start/End: Original strand, 41977753 - 41977878
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||| ||||| |||||| ||||||||| |||||||||||||||   |||  |||||| |||||||||| | |||||| ||||||||||||||||| | |    
T  41977753 taatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaatttggcgaaatatcaaattagtccctgaattttacagacgtccgt 41977852  T
Q  546 caaaatggtcccttcgtccaaaagct 571  Q
    ||||||||||||| ||||||||||||    
T  41977853 caaaatggtccctccgtccaaaagct 41977878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 498 - 590
Target Start/End: Original strand, 46197775 - 46197867
Alignment:
Q  498 gaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    ||||||||| |||||||||||||||  ||||||||||||||||| ||| ||||||||||||||||||||||| ||  |||||| |||||||||    
T  46197775 gaattttgcaaaatatctatttagttcctgaattttacagacgtccattaaaatggtcccttcgtccaaaagttccgttagtgatgatgatgt 46197867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 439 - 590
Target Start/End: Original strand, 44794204 - 44794354
Alignment:
Q  439 taatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacaga 538  Q
    |||||| ||||| ||||| |||||| ||||||||| |||| |||||||| || ||||  ||||||||||||||||| | |||||| ||||||||| ||||    
T  44794204 taatgactaatacctcaaattcgtccttgaattttgaaaa-tcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattttgcaga 44794302  T
Q  539 cgttcatcaaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
     || ||||||| | |||||| |||||||||| ||  ||| | ||||||||||    
T  44794303 agtccatcaaattcgtccctccgtccaaaaggtccgttaatagtgatgatgt 44794354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 468 - 590
Target Start/End: Complemental strand, 3152337 - 3152215
Alignment:
Q  468 aatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtccaaa 567  Q
    |||||| ||||||||||||| || ||||  ||||||||||||||||| | |||||| ||||||||||||||||| |||||||   |||||| ||||||||    
T  3152337 aattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaatccgtccctccgtccaaa 3152238  T
Q  568 agctctattagtggtgatgatgt 590  Q
    || ||  ||| | ||||||||||    
T  3152237 aggtccgttaatagtgatgatgt 3152215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 458 - 532
Target Start/End: Original strand, 23291585 - 23291659
Alignment:
Q  458 ttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    |||||| ||||||||| ||||||||||||||||  |||  |||||||||||||||||||||||||||||||||||    
T  23291585 ttcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaattt 23291659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 452 - 569
Target Start/End: Original strand, 2660221 - 2660338
Alignment:
Q  452 ctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaat 551  Q
    ||||| |||||| ||||||||| |||||||| |||| ||  |||  ||||||||||||||||| | ||||||  |||||||||||||||| ||||||| |    
T  2660221 ctcaaattcgtccttgaattttgaaaaatcgaccaatttcgtccctgaattttgcgaaatatcaaattagtccttgaattttacagacgtccatcaaatt 2660320  T
Q  552 ggtcccttcgtccaaaag 569  Q
     |||||| ||||||||||    
T  2660321 cgtccctccgtccaaaag 2660338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 517 - 590
Target Start/End: Complemental strand, 44276266 - 44276193
Alignment:
Q  517 tttagtctctgaattttacagacgttcatcaaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    |||||||  |||||||||||||||  |||||||||||||||| |||||||||||||| ||||||||||||||||    
T  44276266 tttagtccttgaattttacagacgcccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 44276193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 525 - 587
Target Start/End: Complemental strand, 7884935 - 7884873
Alignment:
Q  525 ctgaattttacagacgttcatcaaaatggtcccttcgtccaaaagctctattagtggtgatga 587  Q
    ||||||||||||||||| |||||||||||||||| |||||||||| ||  |||||||||||||    
T  7884935 ctgaattttacagacgtccatcaaaatggtccctccgtccaaaagttccgttagtggtgatga 7884873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 446 - 523
Target Start/End: Original strand, 48829359 - 48829436
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtc 523  Q
    ||||| ||||| |||||| ||||||||| |||| || ||||||||||| |  ||||||||||||||||||||||||||    
T  48829359 taatacctcaaattcgtccttgaattttcaaaattcagccaaatttattcctgaattttgcgaaatatctatttagtc 48829436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 498 - 590
Target Start/End: Complemental strand, 19987683 - 19987591
Alignment:
Q  498 gaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    ||||||||||||||||| | |||||| || ||||||||| |||| |||||||   |||||| |||||||||| ||| ||||| ||||||||||    
T  19987683 gaattttgcgaaatatcaaattagtccctaaattttacacacgtccatcaaatcagtccctccgtccaaaaggtctgttagtagtgatgatgt 19987591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 440 - 532
Target Start/End: Original strand, 30598334 - 30598426
Alignment:
Q  440 aatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| ||||| |||||| ||||||||| ||||||||| ||||||| |||  ||||||||||||||| |||||| |||  |||||||    
T  30598334 aatgactaatacctcaaattcgtccttgaattttcaaaaatcggtcaaatttgtccctgaattttgcgaaatagctattttgtccttgaattt 30598426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 440 - 532
Target Start/End: Original strand, 44267978 - 44268070
Alignment:
Q  440 aatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| ||||| |||||| ||||||||| |||||||||||||||| |||   ||||||||||||||| |||||| |||  |||||||    
T  44267978 aatgactaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcatctctgaattttgcgaaatagctattttgtccttgaattt 44268070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 440 - 532
Target Start/End: Complemental strand, 54412639 - 54412547
Alignment:
Q  440 aatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||||||||||||||| ||||||  |||||||| |||||| || ||||||  |||  ||||||||||| |||||||||||||  ||||||||    
T  54412639 aatgattaatatctcaaattcgtccgtgaattttaaaaaattggtcaaattcgtccttgaattttgcgagatatctatttagttcctgaattt 54412547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 441 - 532
Target Start/End: Complemental strand, 53094364 - 53094273
Alignment:
Q  441 atgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    |||| ||||| ||||| |||||| ||||||||| ||||||||||||| ||  |||  ||||||||||||||||| | |||||| ||||||||    
T  53094364 atgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 53094273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 446 - 532
Target Start/End: Complemental strand, 38193596 - 38193510
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||| ||  |||  ||||||||||||||||| | |||||| ||||||||    
T  38193596 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 38193510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 446 - 532
Target Start/End: Complemental strand, 41979438 - 41979352
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||| ||  |||  ||||||||||||||||| | |||||| ||||||||    
T  41979438 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 41979352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 446 - 532
Target Start/End: Original strand, 46308810 - 46308896
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||| ||  |||  ||||||||||||||||| | |||||| ||||||||    
T  46308810 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 46308896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 446 - 532
Target Start/End: Complemental strand, 46310522 - 46310436
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| |||||||||||||||| ||||||||| ||| ||  |||  ||||||||||||||||| | |||||| ||||||||    
T  46310522 taatacctcaaattcgtctttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 46310436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 475 - 532
Target Start/End: Complemental strand, 46114162 - 46114105
Alignment:
Q  475 aaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||||||||||||||| |||  ||||||||||||||||||||||||||  |||||||    
T  46114162 aaaaatcggccaaatttgtccttgaattttgcgaaatatctatttagtcattgaattt 46114105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 446 - 532
Target Start/End: Original strand, 3150255 - 3150341
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| |||||| ||||||||| ||||||||| ||| ||  |||  ||||||||||||||||| | |||||| ||||||||    
T  3150255 taatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 3150341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 446 - 532
Target Start/End: Original strand, 46609152 - 46609238
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||||||||| |||||  ||||||||| ||||||||||||| ||  |||  |||||||| |||||||| | |||||| ||||||||    
T  46609152 taatatctcaaattcgttcttgaattttgaaaaatcggccaatttcgtccctgaattttgtgaaatatcaaattagtccctgaattt 46609238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 446 - 532
Target Start/End: Complemental strand, 54900160 - 54900074
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||| ||  |||  ||||||||||||||||| | || ||| ||||||||    
T  54900160 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaatttgtccctgaattt 54900074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 446 - 523
Target Start/End: Original strand, 600728 - 600805
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtc 523  Q
    ||||| ||||| ||| || ||||||||| |||||||| |||||||| | || ||||||| | ||||||||||||||||    
T  600728 taatacctcaaattcatccttgaattttaaaaaatcgaccaaatttgttcatgaattttacaaaatatctatttagtc 600805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 453 - 556
Target Start/End: Complemental strand, 2977443 - 2977340
Alignment:
Q  453 tcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatg 552  Q
    |||| |||||| |||||||||||  ||||||||||||| ||||   |||| ||||||||||| ||| |||| || |||||  || |||| |||||||| |    
T  2977443 tcaaattcgtccttgaatttttacgaatcggccaaattcatcccttaattatgcgaaatatcaattcagtccctaaatttgtcatacgtccatcaaaaag 2977344  T
Q  553 gtcc 556  Q
    ||||    
T  2977343 gtcc 2977340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 499 - 566
Target Start/End: Original strand, 48633933 - 48634000
Alignment:
Q  499 aattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtccaa 566  Q
    |||| ||||||||||| | |||||| ||||||||  ||||||| |||||||| ||||||| |||||||    
T  48633933 aattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtccaa 48634000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 532
Target Start/End: Original strand, 7883331 - 7883417
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| |||||||||||||||| ||||||||||||| ||  |||   ||||||| |||||||| | |||||  ||||||||    
T  7883331 taatacctcaatttcgtctttgaattttgaaaaatcggccaatttcgtccctaaattttgtgaaatatcaaattagttcctgaattt 7883417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 532
Target Start/End: Original strand, 38191898 - 38191984
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| |||||| || |||||| |||||| |||||| ||  |||  ||||||||||||||||| | |||||| ||||||||    
T  38191898 taatacctcaaattcgtccttaaattttgaaaaattggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 38191984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 532
Target Start/End: Original strand, 53092626 - 53092712
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| ||||||||| |||||| |||||| |||||| ||  |||  ||||||||||||||||| | ||| || ||||||||    
T  53092626 taatacctcaaattcgtctttaaattttgaaaaattggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaattt 53092712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 532
Target Start/End: Original strand, 53187745 - 53187831
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| || ||| ||||||||| ||||||||| ||| ||  |||  ||||||||||||||||| | |||||| ||||||||    
T  53187745 taatacctcaaatttgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 53187831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 550
Target Start/End: Original strand, 23774162 - 23774259
Alignment:
Q  453 tcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaa 550  Q
    |||| |||||| ||||||||| |  | |||||||||||  |||   |||| ||||||||||| |||||||| ||||||||  ||||||| ||||||||    
T  23774162 tcaaattcgtccttgaattttcacgagtcggccaaattcgtccctcaattatgcgaaatatcaatttagtccctgaatttgtcagacgtccatcaaaa 23774259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 485 - 558
Target Start/End: Complemental strand, 33852752 - 33852679
Alignment:
Q  485 caaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtccct 558  Q
    |||||||||||   |||| ||||||||||| ||||| | |||||||||  ||||||| |||||||| |||||||    
T  33852752 caaatttatccctcaattatgcgaaatatcaatttaatttctgaatttatcagacgtccatcaaaaaggtccct 33852679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 523
Target Start/End: Complemental strand, 51686480 - 51686403
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtc 523  Q
    ||||| ||||| |||||| || |||||| ||||||| ||||||||  |||   ||||||||||||||| |||||||||    
T  51686480 taatacctcaaattcgtccttaaattttcaaaaatcagccaaattcgtccctaaattttgcgaaatatttatttagtc 51686403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 543 - 587
Target Start/End: Original strand, 600809 - 600853
Alignment:
Q  543 catcaaaatggtcccttcgtccaaaagctctattagtggtgatga 587  Q
    |||||||||||||||| |||| ||||||||  |||||||||||||    
T  600809 catcaaaatggtccctccgtctaaaagctccgttagtggtgatga 600853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 452 - 532
Target Start/End: Complemental strand, 2661988 - 2661908
Alignment:
Q  452 ctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| |||||| ||||||||| |||||||| |||| ||  |||  ||||||||||||||||| | ||||||  |||||||    
T  2661988 ctcaaattcgtccttgaattttgaaaaatcgaccaatttcgtccgtgaattttgcgaaatatcaaattagtccatgaattt 2661908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 89; Significance: 1e-42; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 446 - 590
Target Start/End: Original strand, 13282481 - 13282625
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||||||  |||  |||||||||||||||||||||||||| |||||||||||| |||| |||    
T  13282481 taatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacaaacgtccat 13282580  T
Q  546 caaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    ||||||||||||| |||||||||||||  ||||||||||||||||    
T  13282581 caaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 13282625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 446 - 587
Target Start/End: Complemental strand, 8609928 - 8609787
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||| ||||| |||||  ||||||||| ||||||||||||||||  |||  |||||||||||||||||||||||||| ||||||||||||||||| |||    
T  8609928 taatacctcaaattcgttcttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 8609829  T
Q  546 caaaatggtcccttcgtccaaaagctctattagtggtgatga 587  Q
    ||||||||||||| |||||||||||||  |||||||||||||    
T  8609828 caaaatggtccctccgtccaaaagctccgttagtggtgatga 8609787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 442 - 590
Target Start/End: Complemental strand, 26242459 - 26242311
Alignment:
Q  442 tgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgt 541  Q
    ||||||||| ||||| |||||  ||||||||| ||||||| ||||||||  |||   |||||||||||||||||||||||||||||||||||||||||||    
T  26242459 tgattaatacctcaatttcgttcttgaattttcaaaaatcagccaaattcgtccctaaattttgcgaaatatctatttagtctctgaattttacagacgt 26242360  T
Q  542 tcatcaaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
     |||||||||||||||| |||||||||||||  ||||||| ||||||||    
T  26242359 ccatcaaaatggtccctccgtccaaaagctccgttagtggcgatgatgt 26242311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 441 - 587
Target Start/End: Original strand, 38547226 - 38547372
Alignment:
Q  441 atgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacg 540  Q
    |||| ||||| ||||| |||||| ||||||||| |||||||||||||||   |||| ||||||||||||||||| | |||||| ||||||||||||||||    
T  38547226 atgactaatacctcaagttcgtccttgaattttaaaaaatcggccaaatacgtccatgaattttgcgaaatatcaaattagtccctgaattttacagacg 38547325  T
Q  541 ttcatcaaaatggtcccttcgtccaaaagctctattagtggtgatga 587  Q
    | |||||||||||||||| | |||||||||||  |||||||||||||    
T  38547326 tccatcaaaatggtccctccatccaaaagctccgttagtggtgatga 38547372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 460 - 590
Target Start/End: Complemental strand, 41042711 - 41042581
Alignment:
Q  460 cgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtccctt 559  Q
    |||| ||||||||| |||||| |||||||||| |||  |||||||| ||||||||||||||||| ||||||||||||| ||| ||||||||||||||||     
T  41042711 cgtccttgaattttaaaaaattggccaaatttgtccctgaattttgtgaaatatctatttagtccctgaattttacaggcgtccatcaaaatggtccctc 41042612  T
Q  560 cgtccaaaagctctattagtggtgatgatgt 590  Q
    |||||||||||||  ||||||||||||||||    
T  41042611 cgtccaaaagctccgttagtggtgatgatgt 41042581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 446 - 590
Target Start/End: Complemental strand, 7745253 - 7745109
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||||||||| |||||||||||||||| ||||||| ||||||||  ||   |||||||||||||||| ||||||||| ||| ||||||||||| | |||    
T  7745253 taatatctcaaattcgtctttgaattttcaaaaatcagccaaattcgtctctgaattttgcgaaatatttatttagtccctgtattttacagacatccat 7745154  T
Q  546 caaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    ||||||||||||| | |||||||||||  ||||||||||||||||    
T  7745153 caaaatggtccctccatccaaaagctccgttagtggtgatgatgt 7745109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 442 - 590
Target Start/End: Complemental strand, 41825789 - 41825641
Alignment:
Q  442 tgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgt 541  Q
    ||||||||| ||||| |||||| ||||||||| |||||||    |||||  |||  |||||||||||||||||||||||||| |||||||||||||||||    
T  41825789 tgattaatacctcaaattcgtccttgaattttcaaaaatcaaataaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgt 41825690  T
Q  542 tcatcaaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
     ||||||||||||| || |||||||||||||| ||||| ||||||||||    
T  41825689 ccatcaaaatggtcactccgtccaaaagctctgttagtagtgatgatgt 41825641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 446 - 587
Target Start/End: Complemental strand, 13108477 - 13108336
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||| ||||| |||||| ||||||||| |||||||||| ||||   |||  ||||||||||||||||| | |||||| ||||||||||||||||| |||    
T  13108477 taataactcaaattcgtccttgaattttaaaaaatcggctaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccat 13108378  T
Q  546 caaaatggtcccttcgtccaaaagctctattagtggtgatga 587  Q
    ||||||||||||| ||||||||||||   |||||||||||||    
T  13108377 caaaatggtccctccgtccaaaagcttcgttagtggtgatga 13108336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 465 - 590
Target Start/End: Complemental strand, 13486221 - 13486096
Alignment:
Q  465 ttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtcc 564  Q
    ||||||||||||||||||| || |||  ||   | |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||  ||||    
T  13486221 ttgaatttttaaaaatcggtcagattcgtctctggattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctctgtcc 13486122  T
Q  565 aaaagctctattagtggtgatgatgt 590  Q
    |||||||| |||||| ||||||||||    
T  13486121 aaaagctccattagtagtgatgatgt 13486096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 444 - 590
Target Start/End: Original strand, 42941775 - 42941921
Alignment:
Q  444 attaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttc 543  Q
    ||||||| ||||| |||||| ||||||||| ||||||| ||||||||  |||  |||||||| ||||||| ||||||||| |||||||||||||| || |    
T  42941775 attaatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccctgaattttgagaaatatttatttagtccctgaattttacagatgtcc 42941874  T
Q  544 atcaaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    |||||||| |||||| ||||||||| |||  ||||||| ||||||||    
T  42941875 atcaaaatagtccctccgtccaaaatctccgttagtggagatgatgt 42941921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 446 - 590
Target Start/End: Original strand, 22272337 - 22272483
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaa--tcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttc 543  Q
    ||||| ||||| |||||||||||||||| |||||  || | ||||||  |||  |||||||||| ||||||||||||||| |||||||||||| |||| |    
T  22272337 taatacctcaaattcgtctttgaattttaaaaaaaatcagtcaaattcgtccctgaattttgcgtaatatctatttagtccctgaattttacaaacgtcc 22272436  T
Q  544 atcaaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    |||||||| |||||| | |||||||||||  ||||||||||||||||    
T  22272437 atcaaaatagtccctccatccaaaagctccgttagtggtgatgatgt 22272483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 498 - 590
Target Start/End: Complemental strand, 9673254 - 9673162
Alignment:
Q  498 gaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    |||||||| |||||||||||||| || ||||||||||||||||| |||||||||||||||| |||| |||||||   ||||||||||||||||    
T  9673254 gaattttgtgaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtctaaaagcttcgttagtggtgatgatgt 9673162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 446 - 569
Target Start/End: Original strand, 27691157 - 27691280
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||| ||  |||  ||||||||||||||||| | |||||| ||||||||||||||||| |||    
T  27691157 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccat 27691256  T
Q  546 caaaatggtcccttcgtccaaaag 569  Q
    ||||   |||||| ||||||||||    
T  27691257 caaatccgtccctccgtccaaaag 27691280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 498 - 590
Target Start/End: Complemental strand, 40339769 - 40339677
Alignment:
Q  498 gaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    ||||| || |||||||||||||||||  ||||||||||||| || |||||||||||||||||| |||||||||||  ||||| ||||||||||    
T  40339769 gaattatgtgaaatatctatttagtccatgaattttacagatgtccatcaaaatggtcccttcatccaaaagctccgttagtagtgatgatgt 40339677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 446 - 590
Target Start/End: Original strand, 5036448 - 5036596
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||| ||||| |||||| || |||||| ||||||| | ||||||  |||  |||||||| |||||||||||||||||  ||||||||||||||||  ||    
T  5036448 taatacctcaaattcgtccttaaattttaaaaaatccgtcaaattcgtccctgaattttgtgaaatatctatttagtccttgaattttacagacgtctat 5036547  T
Q  546 caaaatggtcccttcgtcca----aaagctctattagtggtgatgatgt 590  Q
    |||||||||| || ||||||    |||||||| |||||| |||||||||    
T  5036548 caaaatggtctctccgtccaaattaaagctctgttagtgatgatgatgt 5036596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 446 - 532
Target Start/End: Complemental strand, 42943512 - 42943426
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||||||  |||  |||||||||||||||||||||||||| ||||||||    
T  42943512 taatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 42943426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 446 - 523
Target Start/End: Complemental strand, 34681152 - 34681075
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtc 523  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||||||  |||  ||||||||||||||||||||||||||    
T  34681152 taatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtc 34681075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 446 - 532
Target Start/End: Complemental strand, 22273977 - 22273891
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| || ||| ||||||||| ||||||||||||||||| ||   ||||||||| |||||||||||||||| ||||||||    
T  22273977 taatacctcaaatttgtccttgaattttaaaaaatcggccaaatttgtctctgaattttgcaaaatatctatttagtccctgaattt 22273891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 446 - 523
Target Start/End: Original strand, 26238729 - 26238806
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtc 523  Q
    ||||| ||||| |||||| ||||||||| ||||||| ||||||||  |||  ||||||||||||||||||||||||||    
T  26238729 taatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctgaattttgcgaaatatctatttagtc 26238806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 440 - 532
Target Start/End: Original strand, 33761066 - 33761158
Alignment:
Q  440 aatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| ||||| |||||||||||||||| ||||||| ||||| ||  |||  ||||||||||||||||| | |||||| ||||||||    
T  33761066 aatgactaatacctcaaattcgtctttgaattttgaaaaatcagccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 33761158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 458 - 532
Target Start/End: Original strand, 13106819 - 13106893
Alignment:
Q  458 ttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    |||||| ||||||||| ||||||||||||| || ||||  ||||||||||||||||| | |||||| ||||||||    
T  13106819 ttcgtccttgaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattt 13106893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 442 - 532
Target Start/End: Complemental strand, 13284085 - 13283995
Alignment:
Q  442 tgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||||||| | ||| |||||| ||||||||| ||||||||||||| ||| |||  ||||||||||||||||| | ||||||  |||||||    
T  13284085 tgattaataccacaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccatgaattt 13283995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 440 - 532
Target Start/End: Complemental strand, 33762805 - 33762713
Alignment:
Q  440 aatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| ||||| |||||| ||||||||| ||||||||||||| ||  |||  ||||||| ||||||||| | |||||| ||||||||    
T  33762805 aatgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 33762713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 441 - 532
Target Start/End: Complemental strand, 38548922 - 38548831
Alignment:
Q  441 atgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    |||| ||||| ||||| |||||| ||||||||| ||||||||||||| ||  |||  ||||||||||||||||| | ||| || ||||||||    
T  38548922 atgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaattt 38548831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 446 - 532
Target Start/End: Complemental strand, 601790 - 601704
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||| ||  |||  ||||||| ||||||||| | |||||| ||||||||    
T  601790 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 601704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 446 - 532
Target Start/End: Complemental strand, 5038147 - 5038062
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| |||||||| ||||||| ||||||||| ||||||  | |  ||||||||||||||| |||||||||| ||||||||    
T  5038147 taatacctcaaattcgtctt-gaattttaaaaaatcggtcaaattcgttcttgaattttgcgaaatagctatttagtccctgaattt 5038062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 446 - 532
Target Start/End: Complemental strand, 27692923 - 27692837
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||| ||  |||  ||||||||| ||||||| | |||||| ||||||||    
T  27692923 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcaaaatatcaaattagtccctgaattt 27692837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 498 - 590
Target Start/End: Complemental strand, 33708893 - 33708801
Alignment:
Q  498 gaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    ||||||||||||||||  | |||||| |||||||||||| |||| |||||||   |||||| |||||||||| ||  ||| | ||||||||||    
T  33708893 gaattttgcgaaatattaaattagtccctgaattttacaaacgtccatcaaatctgtccctccgtccaaaaggtccgttaatagtgatgatgt 33708801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 452 - 511
Target Start/End: Original strand, 13484554 - 13484613
Alignment:
Q  452 ctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaat 511  Q
    ||||| |||||| ||||||||| ||||||||||||||||  |||  ||||||||||||||    
T  13484554 ctcaaattcgtcattgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaat 13484613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 465 - 568
Target Start/End: Original strand, 15305819 - 15305922
Alignment:
Q  465 ttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtcc 564  Q
    ||||||||| |||||| || ||| ||| |||  ||||| |  |||||||| | |||||| ||||||||||||||||| |||||||   |||||| |||||    
T  15305819 ttgaattttgaaaaattggtcaattttgtccctgaattatttgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtcc 15305918  T
Q  565 aaaa 568  Q
    ||||    
T  15305919 aaaa 15305922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 465 - 568
Target Start/End: Original strand, 15486188 - 15486291
Alignment:
Q  465 ttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtcc 564  Q
    ||||||||| |||||| || ||| ||| |||  ||||| |  |||||||| | |||||| ||||||||||||||||| |||||||   |||||| |||||    
T  15486188 ttgaattttgaaaaattggtcaattttgtccctgaattatttgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtcc 15486287  T
Q  565 aaaa 568  Q
    ||||    
T  15486288 aaaa 15486291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 499 - 566
Target Start/End: Complemental strand, 33750452 - 33750385
Alignment:
Q  499 aattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtccaa 566  Q
    |||| ||||||||||| | |||||| ||||||||  ||||| |||||||||| ||||||| |||||||    
T  33750452 aattatgcgaaatatcaacttagtccctgaatttgtcagacattcatcaaaaaggtccctccgtccaa 33750385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 499 - 566
Target Start/End: Complemental strand, 37526091 - 37526024
Alignment:
Q  499 aattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtccaa 566  Q
    |||| ||||||||||| | |||||| ||||||||| ||||| | |||||||| ||||||| |||||||    
T  37526091 aattatgcgaaatatcaacttagtccctgaatttttcagacatccatcaaaaaggtccctccgtccaa 37526024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 532
Target Start/End: Complemental strand, 29239273 - 29239187
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||| ||  |||   |||||| ||||||||| | |||||| ||||||||    
T  29239273 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaattt 29239187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 480 - 558
Target Start/End: Complemental strand, 31201230 - 31201152
Alignment:
Q  480 tcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtccct 558  Q
    |||||||||||  ||||  |||| ||||||||||| ||||| || ||||||||  ||||||| |||||||| |||||||    
T  31201230 tcggccaaattcgtccatcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccct 31201152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 532
Target Start/End: Original strand, 35509217 - 35509303
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| || ||| ||||||||| ||||||||| ||| ||  |||  ||||||||||||||||| | |||||| ||||||||    
T  35509217 taatacctcaaattagtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 35509303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 550
Target Start/End: Complemental strand, 462484 - 462387
Alignment:
Q  453 tcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaa 550  Q
    |||| |||||| ||||||||||| | |||||||||||| ||||   |||| ||||||||||| | ||||||  |||||||  || |||| ||||||||    
T  462484 tcaaattcgtcattgaatttttacagatcggccaaattcatccgtcaattatgcgaaatatcaacttagtccttgaatttgtcaaacgtccatcaaaa 462387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 558
Target Start/End: Complemental strand, 33160262 - 33160157
Alignment:
Q  453 tcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatg 552  Q
    |||| |||||| ||||||||| | |  ||||||||||| ||||   |||| || |||||||| | |||||||||||||||  ||||||  |||||||| |    
T  33160262 tcaaattcgtccttgaattttcacaggtcggccaaattcatccctcaattatgtgaaatatcaacttagtctctgaatttgtcagacgcccatcaaaaag 33160163  T
Q  553 gtccct 558  Q
    ||||||    
T  33160162 gtccct 33160157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 490
Target Start/End: Original strand, 41040718 - 41040767
Alignment:
Q  441 atgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatt 490  Q
    |||| ||||| ||||| || |||||||||||||||||||||||| |||||    
T  41040718 atgactaatacctcaaatttgtctttgaatttttaaaaatcggctaaatt 41040767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 523
Target Start/End: Original strand, 41823905 - 41823970
Alignment:
Q  458 ttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtc 523  Q
    |||||| ||||||||| ||||||| || || ||  |||  ||||||||||||||||||||||||||    
T  41823905 ttcgtccttgaattttcaaaaatcagctaatttcgtccttgaattttgcgaaatatctatttagtc 41823970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 465 - 549
Target Start/End: Complemental strand, 27407019 - 27406935
Alignment:
Q  465 ttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaa 549  Q
    ||||||||| |||||| |||||| ||  |||| ||||| | ||||||||  |  ||||| ||||||||||||||||| |||||||    
T  27407019 ttgaattttgaaaaattggccaatttcgtccatgaattattcgaaatattaaaatagtccctgaattttacagacgtccatcaaa 27406935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 83; Significance: 5e-39; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 444 - 590
Target Start/End: Complemental strand, 7373081 - 7372935
Alignment:
Q  444 attaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttc 543  Q
    ||||||| ||||| |||||  |||||||||||||||| || ||||||  |||  |||||||||||||||| ||||||||| ||||||||||||| ||| |    
T  7373081 attaatacctcaaattcgtgattgaatttttaaaaattggtcaaattcgtccctgaattttgcgaaatatttatttagtccctgaattttacaggcgtcc 7372982  T
Q  544 atcaaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||    
T  7372981 atcaaaatggtccctccgtccaaaagctccattagtggtgatgatgt 7372935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 467 - 590
Target Start/End: Original strand, 20523390 - 20523513
Alignment:
Q  467 gaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtccaa 566  Q
    ||||||| ||||||||| ||||||  |||  |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||    
T  20523390 gaattttcaaaaatcggtcaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaa 20523489  T
Q  567 aagctctattagtggtgatgatgt 590  Q
    ||| ||| ||||||||||||||||    
T  20523490 aagttctgttagtggtgatgatgt 20523513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 440 - 587
Target Start/End: Complemental strand, 32439218 - 32439071
Alignment:
Q  440 aatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagac 539  Q
    ||||| ||||| ||||| || ||| ||||||||| ||||||||| ||||||  |||  |||||||||||||||||||||||||| |||||||||||||||    
T  32439218 aatgactaatacctcaaattagtcattgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagac 32439119  T
Q  540 gttcatcaaaatggtcccttcgtccaaaagctctattagtggtgatga 587  Q
    || |||||||||||||||| |||||||||| ||| ||||| |||||||    
T  32439118 gtccatcaaaatggtccctccgtccaaaagatctgttagtagtgatga 32439071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 441 - 590
Target Start/End: Complemental strand, 13613708 - 13613559
Alignment:
Q  441 atgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacg 540  Q
    |||| ||||| || || |||||| ||||||||| ||||||||| ||||||  |||  ||||||||||||||||| | |||||| ||||||||||||||||    
T  13613708 atgactaataccttaaattcgtccttgaattttgaaaaatcggtcaaattcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacg 13613609  T
Q  541 ttcatcaaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    | ||||||| | |||||| |||||||||| || |||||||||||||||||    
T  13613608 tccatcaaattagtccctccgtccaaaaggtccattagtggtgatgatgt 13613559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 498 - 590
Target Start/End: Original strand, 9398715 - 9398807
Alignment:
Q  498 gaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||| ||  ||||||||||||||||    
T  9398715 gaattttgcgaaatatctatttagtccctgaattttatagacgttcatcaaaatggtccctccgtccaaaagttccgttagtggtgatgatgt 9398807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 437 - 590
Target Start/End: Original strand, 6899479 - 6899632
Alignment:
Q  437 tataatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttaca 536  Q
    |||||||| ||||| ||||| || ||| ||||||||| ||||||| | ||||||  ||    ||||||| ||||||||||||||||| || |||||||||    
T  6899479 tataatgactaatacctcaaatttgtccttgaattttcaaaaatcagtcaaattcgtctctaaattttgtgaaatatctatttagtccctaaattttaca 6899578  T
Q  537 gacgttcatcaaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    ||| | ||||||||||||||||||||||||||||||  |||||| |||||||||    
T  6899579 gacatccatcaaaatggtcccttcgtccaaaagctccgttagtgttgatgatgt 6899632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 453 - 590
Target Start/End: Original strand, 10568409 - 10568546
Alignment:
Q  453 tcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatg 552  Q
    |||| |||||| ||||||||| ||||||| | ||||||  |||  |||||| ||||||||| ||||||||| |||||||||||||||||  ||||||||     
T  10568409 tcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccttgaatttagcgaaatatttatttagtccctgaattttacagacgtctatcaaaata 10568508  T
Q  553 gtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    |||||| |||||||||||||  ||||||||||||||||    
T  10568509 gtccctccgtccaaaagctccgttagtggtgatgatgt 10568546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 446 - 587
Target Start/End: Original strand, 32516880 - 32517021
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||| ||||| |||||| ||||||||| ||||||||| ||||||  |||  ||||||| | ||||| |||||||| |  ||||||||||| |||| |||    
T  32516880 taatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttacaaaatacctatttagcccttgaattttacatacgtccat 32516979  T
Q  546 caaaatggtcccttcgtccaaaagctctattagtggtgatga 587  Q
    |||||| |||||| |||||||||||||  |||||||||||||    
T  32516980 caaaattgtccctccgtccaaaagctccgttagtggtgatga 32517021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 454 - 590
Target Start/End: Complemental strand, 14338588 - 14338452
Alignment:
Q  454 caacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatgg 553  Q
    |||||||||| ||||||||||||||||| ||||||||  |||   ||||||||||||| |||| ||  || |||||||| |||||||| |||||||||||    
T  14338588 caacttcgtccttgaatttttaaaaatcagccaaattcgtcctcaaattttgcgaaatgtctaattcatccctgaatttcacagacgtccatcaaaatgg 14338489  T
Q  554 tcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    ||||| ||| |||||||||  ||| || |||||||||    
T  14338488 tccctccgttcaaaagctccgttactgatgatgatgt 14338452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 446 - 587
Target Start/End: Original strand, 11355225 - 11355366
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||| ||||| |||||| ||||||||| ||||||||| ||||||  ||   |||||||  |||||||||||| | || ||||||||||||||||  ||     
T  11355225 taatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtcactgaattttatgaaatatctattaactccctgaattttacagacggccac 11355324  T
Q  546 caaaatggtcccttcgtccaaaagctctattagtggtgatga 587  Q
    ||||||||||||| |||||||||||||   ||||||||||||    
T  11355325 caaaatggtccctccgtccaaaagctccggtagtggtgatga 11355366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 525 - 590
Target Start/End: Original strand, 7049839 - 7049904
Alignment:
Q  525 ctgaattttacagacgttcatcaaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||  || |||||||||||||    
T  7049839 ctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttcgtggtgatgatgt 7049904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 446 - 532
Target Start/End: Complemental strand, 32518583 - 32518497
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||| || ||||  ||||||||||||||||| | |||||| ||||||||    
T  32518583 taatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattt 32518497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 446 - 523
Target Start/End: Complemental strand, 10570005 - 10569928
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtc 523  Q
    ||||| ||||| |||||| ||||||||| ||||||| ||||||||  |||| ||||||||| ||||||||||||||||    
T  10570005 taatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccatgaattttgcaaaatatctatttagtc 10569928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 465 - 568
Target Start/End: Original strand, 3456770 - 3456873
Alignment:
Q  465 ttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtcc 564  Q
    ||||||||| ||||||||||||| ||  |||  ||||||| ||||||||| | |||||| ||||||||| ||||||| |||||||   |||||| |||||    
T  3456770 ttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtcc 3456869  T
Q  565 aaaa 568  Q
    ||||    
T  3456870 aaaa 3456873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 446 - 512
Target Start/End: Original strand, 7371178 - 7371244
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaata 512  Q
    ||||| |||||||||||| ||||||||| ||||||||||||||||  |||  |||||||||||||||    
T  7371178 taatacctcaacttcgtccttgaattttcaaaaatcggccaaattggtccctgaattttgcgaaata 7371244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 446 - 532
Target Start/End: Complemental strand, 9400121 - 9400035
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| |||||| ||||||||| ||||||| | |||||| ||||  ||||||||||||||||||| |||||| | ||||||    
T  9400121 taatacctcaaattcgtccttgaattttgaaaaatcagtcaaattcatccttgaattttgcgaaatatctaattagtccccgaattt 9400035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 446 - 532
Target Start/End: Complemental strand, 20525420 - 20525334
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| ||||||||||||||||||||||| || |||||| ||||  ||||||||| ||||| |||||| |||  |||||||    
T  20525420 taatacctcaaattcgtctttgaatttttaaaaataggtcaaattcatccctgaattttgcaaaatagctattttgtccttgaattt 20525334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 435 - 532
Target Start/End: Original strand, 32454240 - 32454337
Alignment:
Q  435 tatataatgattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    |||||||||| ||||| |||||  | ||| ||||||||| ||||||||||||| ||  |||  ||||||| ||||||||| | |||||| ||||||||    
T  32454240 tatataatgactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccttgaatttttcgaaatatcaaattagtccctgaattt 32454337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 478 - 580
Target Start/End: Original strand, 30891159 - 30891261
Alignment:
Q  478 aatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcatcaaaatggtcccttcgtccaaaagctctatta 577  Q
    |||||| |||||||||||   |||| ||| ||||||   ||||||| ||||||||  ||||||| || |||| | |||||| |||||||| |||||||||    
T  30891159 aatcggtcaaatttatccttaaattatgcaaaatatacgtttagtccctgaatttgtcagacgtccaacaaagtagtccctccgtccaaatgctctatta 30891258  T
Q  578 gtg 580  Q
    |||    
T  30891259 gtg 30891261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 523
Target Start/End: Original strand, 13610705 - 13610770
Alignment:
Q  458 ttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtc 523  Q
    |||||| ||||||||| ||||||||  ||||||| |||  ||||||||||||||||| | ||||||    
T  13610705 ttcgtccttgaattttgaaaaatcgatcaaatttgtccctgaattttgcgaaatatcaaattagtc 13610770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 523
Target Start/End: Original strand, 21068628 - 21068705
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtc 523  Q
    ||||| ||||| |||||| ||||||||| || |||| | ||||||  ||||  |||||| ||||||||||||||||||    
T  21068628 taatacctcaaattcgtccttgaattttcaacaatcagtcaaattcgtccacaaattttacgaaatatctatttagtc 21068705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454 (Bit Score: 73; Significance: 5e-33; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 443 - 587
Target Start/End: Original strand, 1263 - 1407
Alignment:
Q  443 gattaatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgtt 542  Q
    |||||||| ||||| | |||| ||||||||| |||||| ||  |||||  |||| |||||||  ||||||||||||||||| |||||||||||||||||     
T  1263 gattaatacctcaaatccgtccttgaattttaaaaaattggttaaattcgtccatgaattttatgaaatatctatttagtccctgaattttacagacgtc 1362  T
Q  543 catcaaaatggtcccttcgtccaaaagctctattagtggtgatga 587  Q
    |||||||||||||||| |||||||||||||  |||||||||||||    
T  1363 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 1407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 65; Significance: 3e-28; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 446 - 590
Target Start/End: Original strand, 3297 - 3441
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||| ||| |||  ||||||||||||||||| | |||||| ||||||||||||||||| |||    
T  3297 taatacctcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccat 3396  T
Q  546 caaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    |||| | |||||| |||||||||| ||  ||| | ||||||||||    
T  3397 caaattcgtccctccgtccaaaaggtccgttaatagtgatgatgt 3441  T

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Target: scaffold0058; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 446 - 590
Target Start/End: Original strand, 4469 - 4613
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||| ||||| |||||| ||||||||| ||||||||||||| ||| |||  ||||||||||||||||| | |||||| ||||||||||||||||| |||    
T  4469 taatacctcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccat 4568  T
Q  546 caaaatggtcccttcgtccaaaagctctattagtggtgatgatgt 590  Q
    |||| | |||||| |||||||||| ||  ||| | ||||||||||    
T  4569 caaattcgtccctccgtccaaaaggtccgttaatagtgatgatgt 4613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 446 - 532
Target Start/End: Complemental strand, 14429 - 14343
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||| ||||| |||||| ||||||||| |||||||||| || ||  |||  ||||||||||||||||| | |||||| ||||||||    
T  14429 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 14343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 446 - 587
Target Start/End: Original strand, 8265 - 8404
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattttacagacgttcat 545  Q
    ||||| ||||| |||||| ||||||||| |||||| |||||||||  | |  ||||||||| |||||||||||||||| |||||||||  | |||| |||    
T  8265 taatacctcaaattcgtccttgaattttaaaaaattggccaaattcgttcttgaattttgcaaaatatctatttagtccctgaatttt--atacgtccat 8362  T
Q  546 caaaatggtcccttcgtccaaaagctctattagtggtgatga 587  Q
    ||||||||| | | ||||||||||||   |||||||||||||    
T  8363 caaaatggtacatccgtccaaaagcttcgttagtggtgatga 8404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 446 - 532
Target Start/End: Original strand, 106673 - 106757
Alignment:
Q  446 taatatctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctatttagtctctgaattt 532  Q
    ||||||||||| |||||| ||||||||  |  |||| ||||||||| |||| ||||||| ||||||||||||||||| || ||||||    
T  106673 taatatctcaaattcgtccttgaattt--accaatcagccaaatttgtccatgaattttacgaaatatctatttagtttccgaattt 106757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 452 - 519
Target Start/End: Original strand, 436274 - 436341
Alignment:
Q  452 ctcaacttcgtctttgaatttttaaaaatcggccaaatttatccaagaattttgcgaaatatctattt 519  Q
    ||||| |||||  ||||||||| ||||||| |||||||| |||||  |||||||||||||||||||||    
T  436274 ctcaaattcgttcttgaattttcaaaaatcagccaaattcatccataaattttgcgaaatatctattt 436341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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