View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8137_low_13 (Length: 245)
Name: NF8137_low_13
Description: NF8137
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8137_low_13 |
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Alignment Details
Target: chr1 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 35287433 - 35287216
Alignment:
| Q |
1 |
tctgcaactacaattgctgccacaatataaaggttttaaaggtcgtccaccatttccatacccctatcaagtggagtctcttgcatccctttttgtgtaa |
100 |
Q |
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| T |
35287433 |
tctgcaactacaattgctgccacaatataaaggttttaaaggtcgtccaccatttccatactcctatcaagtggagtctcttgcatccctttttgtgtaa |
35287334 |
T |
|
| Q |
101 |
tattttgtttggtcttaaccttgttctttataggccttactaatctgtagtttagccatgggatgactaaaatcggatcaaaattatttcattcaggatc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35287333 |
tattttgtttggtcttaaccttgttctttataggccttactaatctgtagtttagccatgggatgactaaaatcggatcaaaattatttcattcaggatc |
35287234 |
T |
|
| Q |
201 |
gaattcgagtattatcta |
218 |
Q |
| |
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||||||||||| |||||| |
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| T |
35287233 |
gaattcgagtactatcta |
35287216 |
T |
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