View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8139_high_2 (Length: 417)

Name: NF8139_high_2
Description: NF8139
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8139_high_2
NF8139_high_2
[»] chr8 (23 HSPs)
chr8 (1-402)||(7442855-7443262)
chr8 (1-85)||(8342982-8343066)
chr8 (1-66)||(2572040-2572105)
chr8 (3-48)||(18170484-18170529)
chr8 (3-48)||(18634052-18634097)
chr8 (1-48)||(4948662-4948709)
chr8 (1-48)||(24669443-24669490)
chr8 (1-48)||(25566851-25566898)
chr8 (1-48)||(40332201-40332248)
chr8 (1-83)||(13436932-13437013)
chr8 (1-50)||(7658473-7658522)
chr8 (1-66)||(22651986-22652051)
chr8 (1-66)||(29510288-29510353)
chr8 (1-48)||(11927088-11927135)
chr8 (1-48)||(14134709-14134756)
chr8 (1-48)||(20873079-20873126)
chr8 (11-66)||(26902159-26902214)
chr8 (1-35)||(13203651-13203685)
chr8 (1-66)||(15816113-15816178)
chr8 (1-66)||(21465422-21465487)
chr8 (1-66)||(25172682-25172747)
chr8 (1-66)||(28745508-28745573)
chr8 (1-66)||(29447094-29447159)
[»] chr6 (30 HSPs)
chr6 (1-83)||(21395275-21395356)
chr6 (1-66)||(5970092-5970157)
chr6 (1-66)||(16766707-16766772)
chr6 (1-48)||(7977832-7977879)
chr6 (1-63)||(9522901-9522963)
chr6 (1-51)||(25038070-25038120)
chr6 (1-66)||(9107354-9107419)
chr6 (11-66)||(8714000-8714055)
chr6 (1-48)||(10770676-10770723)
chr6 (1-48)||(12696334-12696381)
chr6 (1-48)||(28715305-28715352)
chr6 (1-48)||(34595144-34595191)
chr6 (1-35)||(1532250-1532284)
chr6 (1-66)||(4118317-4118382)
chr6 (1-49)||(16833318-16833366)
chr6 (1-48)||(6898283-6898330)
chr6 (1-48)||(7801158-7801205)
chr6 (1-48)||(15489734-15489781)
chr6 (17-48)||(27904038-27904069)
chr6 (1-48)||(28152109-28152155)
chr6 (1-48)||(31384930-31384977)
chr6 (1-35)||(7569183-7569217)
chr6 (1-35)||(17341679-17341713)
chr6 (1-66)||(8365503-8365568)
chr6 (1-38)||(17435209-17435246)
chr6 (11-48)||(23771598-23771635)
chr6 (11-48)||(31429005-31429042)
chr6 (1-37)||(6349750-6349786)
chr6 (12-48)||(9911530-9911566)
chr6 (1-45)||(31959169-31959213)
[»] chr5 (26 HSPs)
chr5 (1-59)||(41633745-41633803)
chr5 (1-66)||(19579711-19579776)
chr5 (1-66)||(21522760-21522825)
chr5 (1-66)||(21533326-21533391)
chr5 (1-66)||(39698551-39698616)
chr5 (1-48)||(6247632-6247679)
chr5 (1-48)||(21191058-21191105)
chr5 (1-40)||(27932245-27932284)
chr5 (1-47)||(43001810-43001856)
chr5 (1-66)||(3966513-3966578)
chr5 (2-43)||(6326304-6326345)
chr5 (17-66)||(21542056-21542105)
chr5 (1-46)||(24906305-24906350)
chr5 (1-48)||(8420037-8420084)
chr5 (1-48)||(13287401-13287448)
chr5 (1-44)||(21576751-21576794)
chr5 (1-48)||(42893370-42893417)
chr5 (1-35)||(5467993-5468027)
chr5 (1-66)||(7677715-7677780)
chr5 (11-48)||(15884008-15884045)
chr5 (1-66)||(30098336-30098401)
chr5 (11-60)||(30185851-30185900)
chr5 (1-66)||(37328828-37328893)
chr5 (1-54)||(40131631-40131684)
chr5 (1-45)||(14674279-14674323)
chr5 (17-85)||(21351870-21351938)
[»] chr7 (23 HSPs)
chr7 (1-66)||(24339652-24339717)
chr7 (1-85)||(11272550-11272637)
chr7 (1-48)||(21880162-21880209)
chr7 (1-48)||(27945051-27945098)
chr7 (1-66)||(9408318-9408383)
chr7 (1-48)||(28155580-28155627)
chr7 (1-66)||(6028635-6028700)
chr7 (1-66)||(15902832-15902897)
chr7 (11-60)||(21560523-21560572)
chr7 (1-46)||(26033465-26033510)
chr7 (11-48)||(32094022-32094059)
chr7 (1-37)||(12843188-12843224)
chr7 (1-37)||(30813822-30813858)
chr7 (1-48)||(3991334-3991381)
chr7 (1-48)||(5409838-5409885)
chr7 (1-48)||(7438716-7438763)
chr7 (1-48)||(9778510-9778557)
chr7 (1-44)||(13770701-13770744)
chr7 (1-48)||(25481912-25481959)
chr7 (5-74)||(1885587-1885656)
chr7 (11-48)||(18039019-18039056)
chr7 (21-66)||(25822685-25822730)
chr7 (1-45)||(24105688-24105732)
[»] chr4 (19 HSPs)
chr4 (1-82)||(11596320-11596401)
chr4 (1-50)||(29205454-29205503)
chr4 (1-48)||(8423720-8423767)
chr4 (1-48)||(21945513-21945560)
chr4 (1-64)||(30838220-30838283)
chr4 (1-48)||(847961-848008)
chr4 (1-48)||(2361977-2362024)
chr4 (1-48)||(4383378-4383424)
chr4 (1-48)||(6485613-6485660)
chr4 (1-48)||(12797340-12797386)
chr4 (1-48)||(23292988-23293035)
chr4 (1-48)||(28964250-28964297)
chr4 (1-48)||(54580025-54580072)
chr4 (19-85)||(12708175-12708241)
chr4 (1-35)||(24343517-24343551)
chr4 (11-85)||(42640549-42640623)
chr4 (11-48)||(30298967-30299004)
chr4 (11-48)||(30327835-30327872)
chr4 (1-38)||(51701268-51701305)
[»] chr3 (22 HSPs)
chr3 (1-82)||(1509549-1509630)
chr3 (1-65)||(34910327-34910391)
chr3 (1-50)||(20503475-20503524)
chr3 (1-48)||(28918011-28918058)
chr3 (1-51)||(17005618-17005668)
chr3 (1-47)||(26508120-26508166)
chr3 (1-66)||(14209123-14209188)
chr3 (1-66)||(15796278-15796343)
chr3 (5-45)||(4990972-4991012)
chr3 (1-65)||(8039820-8039884)
chr3 (1-48)||(10954962-10955009)
chr3 (1-48)||(49651788-49651835)
chr3 (1-48)||(51206355-51206402)
chr3 (1-48)||(55401085-55401132)
chr3 (1-47)||(4987294-4987340)
chr3 (2-48)||(8587023-8587069)
chr3 (1-46)||(21256990-21257035)
chr3 (11-52)||(30184104-30184145)
chr3 (1-65)||(16789022-16789086)
chr3 (1-48)||(25775518-25775566)
chr3 (1-33)||(33006833-33006865)
chr3 (1-65)||(34185108-34185172)
[»] chr1 (33 HSPs)
chr1 (1-66)||(6612155-6612220)
chr1 (1-85)||(113309-113392)
chr1 (1-83)||(1704957-1705041)
chr1 (1-50)||(21378588-21378637)
chr1 (1-66)||(47989507-47989572)
chr1 (1-44)||(18190114-18190157)
chr1 (1-48)||(18337339-18337386)
chr1 (1-48)||(24577188-24577235)
chr1 (1-48)||(40258935-40258982)
chr1 (1-48)||(41877472-41877519)
chr1 (1-66)||(44482240-44482305)
chr1 (2-66)||(15449216-15449279)
chr1 (1-45)||(31015053-31015097)
chr1 (1-48)||(1486711-1486758)
chr1 (1-48)||(22515889-22515936)
chr1 (1-48)||(22881618-22881665)
chr1 (11-66)||(30173746-30173801)
chr1 (11-66)||(31694694-31694749)
chr1 (1-48)||(38078663-38078710)
chr1 (1-48)||(42359451-42359498)
chr1 (4-66)||(28273072-28273134)
chr1 (11-48)||(1815277-1815314)
chr1 (1-50)||(1864880-1864929)
chr1 (1-66)||(5376484-5376549)
chr1 (1-66)||(9629884-9629949)
chr1 (1-34)||(9828054-9828087)
chr1 (1-66)||(25361896-25361961)
chr1 (1-38)||(37055868-37055905)
chr1 (11-48)||(51410045-51410082)
chr1 (1-29)||(2851031-2851059)
chr1 (3-67)||(14332420-14332484)
chr1 (5-77)||(46914013-46914084)
chr1 (1-45)||(48450592-48450636)
[»] scaffold0027 (1 HSPs)
scaffold0027 (1-48)||(46692-46739)
[»] scaffold0049 (1 HSPs)
scaffold0049 (1-48)||(63783-63830)
[»] chr2 (20 HSPs)
chr2 (1-48)||(15657874-15657921)
chr2 (1-48)||(15972883-15972930)
chr2 (1-48)||(18841015-18841062)
chr2 (1-48)||(30335427-30335474)
chr2 (1-43)||(21374706-21374748)
chr2 (1-43)||(39323274-39323316)
chr2 (1-66)||(30717514-30717579)
chr2 (1-66)||(37419753-37419818)
chr2 (1-45)||(30404855-30404899)
chr2 (1-48)||(2438721-2438768)
chr2 (5-48)||(11223865-11223908)
chr2 (1-48)||(12668425-12668472)
chr2 (1-44)||(12940941-12940984)
chr2 (11-85)||(23058404-23058481)
chr2 (1-40)||(23921263-23921302)
chr2 (1-48)||(42832278-42832325)
chr2 (1-35)||(28412360-28412394)
chr2 (11-48)||(19536399-19536436)
chr2 (1-66)||(36756328-36756393)
chr2 (1-65)||(18420419-18420483)
[»] scaffold0004 (2 HSPs)
scaffold0004 (11-53)||(83180-83222)
scaffold0004 (1-43)||(92817-92859)
[»] scaffold0126 (1 HSPs)
scaffold0126 (11-75)||(19164-19228)
[»] scaffold0044 (1 HSPs)
scaffold0044 (1-65)||(53190-53254)
[»] scaffold0652 (1 HSPs)
scaffold0652 (1-48)||(464-511)
[»] scaffold0223 (1 HSPs)
scaffold0223 (1-48)||(20182-20229)
[»] scaffold0050 (1 HSPs)
scaffold0050 (1-48)||(70288-70335)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-48)||(17751-17798)
[»] scaffold0009 (2 HSPs)
scaffold0009 (11-50)||(174553-174592)
scaffold0009 (11-50)||(180066-180105)
[»] scaffold0021 (1 HSPs)
scaffold0021 (5-47)||(130496-130538)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-43)||(192256-192298)
[»] scaffold0450 (1 HSPs)
scaffold0450 (1-66)||(8619-8684)
[»] scaffold0361 (1 HSPs)
scaffold0361 (1-38)||(14540-14577)
[»] scaffold0136 (1 HSPs)
scaffold0136 (1-66)||(3833-3898)
[»] scaffold0103 (1 HSPs)
scaffold0103 (1-38)||(51821-51858)
[»] scaffold0083 (1 HSPs)
scaffold0083 (11-48)||(45532-45569)
[»] scaffold0066 (1 HSPs)
scaffold0066 (1-38)||(33375-33412)
[»] scaffold0025 (1 HSPs)
scaffold0025 (11-48)||(23790-23827)


Alignment Details
Target: chr8 (Bit Score: 272; Significance: 1e-152; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 1 - 402
Target Start/End: Original strand, 7442855 - 7443262
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacaccgggacacgccaaatccgatcagtgtaattacgg 100  Q
    ||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||  ||||||||| ||||             
T  7442855 ataatttcataaaattacataattcagtgtaattacaagtgttggtgttgtatcagtgtcggacaccgggacacgttaaatccgatgagtga-------- 7442946  T
Q  101 gtgtctgtgcttcatagattaaaagtataaagtaaatattgatttttaattaacacaatgaagaaaagtcttacttggatcaatctcagtgctaaaaagt 200  Q
        ||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  7442947 ----ctgcgcttcatagattaaaagtataaattaaatattgatttttaattaacagaatgaagaaaagtcttacttggatcaatctcagtgctaaaaagt 7443042  T
Q  201 tcaagaacaacatttcttccaatcctatcagtaaaagcatcaagatgtttcacaaaagtctctttgaaatcctctttgatcttgttcctcactgtcacaa 300  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7443043 tcaagaacaacatttcgtccaatcctatcagtaaaagcatcaagatgtttcacaaaagtctctttgaaatcctctttgatcttgttcctcactgtcacaa 7443142  T
Q  301 cagctctaaccttaaatttcactggtttctcagcaggaacaga------------------agaagaagatgaagaagagcttttcatcaaatcttcact 382  Q
    |||||||||||||||||||||||||||||||||||||||||||                  |||||||||||||||||||||||||||||||||||||||    
T  7443143 cagctctaaccttaaatttcactggtttctcagcaggaacagaagaagaagatgatgatatagaagaagatgaagaagagcttttcatcaaatcttcact 7443242  T
Q  383 gatagctgcaacaggaaact 402  Q
    ||||||||||||||| ||||    
T  7443243 gatagctgcaacagggaact 7443262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 8342982 - 8343066
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacaccgggacacgccaaatccga 85  Q
    ||||||||| ||||| |||||||| ||||||||||||| ||||||||| |||   ||||| |||||||||||||||| |||||||    
T  8342982 ataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtacatgtgtccgacaccgggacacgcctaatccga 8343066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 2572105 - 2572040
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    ||||||||| ||||| |||||||| ||||||||||||| ||||||||| || || |||||||||||    
T  2572105 ataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtgtctgtgtcggacac 2572040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 18170529 - 18170484
Alignment:
Q  3 aatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||    
T  18170529 aatttgaaaaaattacataattcaatgtaattacaaatgtcggtgt 18170484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 18634097 - 18634052
Alignment:
Q  3 aatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||    
T  18634097 aatttgaaaaaattacataattcaatgtaattacaaatgtcggtgt 18634052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 4948662 - 4948709
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| |||||||||||||||||||||| |||||||||    
T  4948662 ataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgt 4948709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 24669443 - 24669490
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    |||||||||  ||||||||||||||||||||||||||| |||||||||    
T  24669443 ataatttgaggaaattacataattcagtgtaattacaagtgtcggtgt 24669490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 25566851 - 25566898
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| |||||||||||||||||||||| |||||||||    
T  25566851 ataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgt 25566898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 40332201 - 40332248
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| |||||||||||||||||||||| |||||||||    
T  40332201 ataatttgagaaaatcacataattcagtgtaattacaagtgtcggtgt 40332248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 13437013 - 13436932
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacaccgggacacgccaaatcc 83  Q
    ||||||||| ||||| ||||||||||  ||||| |||| ||||||||| || || |||||| ||||||||||||||| |||||    
T  13437013 ataatttgaaaaaatcacataattcatggtaataacaagtgtcggtgtcgtgtcggtgtcg-acaccgggacacgcctaatcc 13436932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 7658473 - 7658522
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttg 50  Q
    ||||||||| ||||||||||||||||||||||||| |  |||||||||||    
T  7658473 ataatttgagaaaattacataattcagtgtaattatatttgtcggtgttg 7658522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 22651986 - 22652051
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    ||||||||| ||||| |||||||||| | ||||||||| ||||||||| || || |||||||||||    
T  22651986 ataatttgaaaaaatcacataattcaatataattacaagtgtcggtgtcgtgtcggtgtcggacac 22652051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 29510353 - 29510288
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    ||||||||| ||||| ||| |||||||| ||||||||| ||||||||| || || |||||||||||    
T  29510353 ataatttgaaaaaatcacaaaattcagtataattacaagtgtcggtgtagtgtcggtgtcggacac 29510288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 11927135 - 11927088
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||||||||| ||||||||||||||||||| |  |||||||||    
T  11927135 ataatttgataaaatcacataattcagtgtaattatatgtgtcggtgt 11927088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 14134709 - 14134756
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| ||||||||||||||||||| | ||||||||||    
T  14134709 ataatttgagaaaatcacataattcagtgtaattatatatgtcggtgt 14134756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 20873079 - 20873126
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| |||||||| ||||||||||||| |||||||||    
T  20873079 ataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgt 20873126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 26902214 - 26902159
Alignment:
Q  11 aaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    ||||| ||||||||||||||||||| |  ||||||||| |||| ||||||||||||    
T  26902214 aaaatcacataattcagtgtaattatatgtgtcggtgtcgtatgagtgtcggacac 26902159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 13203651 - 13203685
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaatta 35  Q
    ||||||||| |||||||||||||||||||||||||    
T  13203651 ataatttgagaaaattacataattcagtgtaatta 13203685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 15816178 - 15816113
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    ||||||||| ||||| |||||||| |||||||||| || ||||||||| || |  |||||||||||    
T  15816178 ataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtcgtgttggtgtcggacac 15816113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 21465422 - 21465487
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    ||||||||| ||||| | |||||||  ||||||||||| ||| ||||| || ||||||||||||||    
T  21465422 ataatttgaaaaaatcatataattcgatgtaattacaagtgttggtgtcgtgtcagtgtcggacac 21465487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 25172747 - 25172682
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    ||||||||||||||||||||| || | |||||||| |  ||||||||| || ||| ||||||||||    
T  25172747 ataatttgataaaattacatattttaatgtaattatatgtgtcggtgtcgtgtcaatgtcggacac 25172682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 28745508 - 28745573
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    ||||||||| ||| | |||||||||| ||||| ||||||||||| ||| || || |||||||||||    
T  28745508 ataatttgaaaaattcacataattcaatgtaactacaaatgtcgatgtcgtgtcggtgtcggacac 28745573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 29447159 - 29447094
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    ||||||||| ||||| |||||||||| ||||| ||||| |||||||||  | || |||||||||||    
T  29447159 ataatttgagaaaatcacataattcaatgtaactacaagtgtcggtgtcatgtcggtgtcggacac 29447094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 1e-17; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 21395356 - 21395275
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacaccgggacacgccaaatcc 83  Q
    ||||||||| ||||| |||||||| ||||||||||||| ||||||||| || ||||||||||||||| ||||||||| |||||    
T  21395356 ataatttgagaaaat-acataatttagtgtaattacaagtgtcggtgtcgtgtcagtgtcggacaccaggacacgcctaatcc 21395275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 5970157 - 5970092
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    ||||||||| ||||| |||||||||||||||||||||||||| ||||| || || |||||||||||    
T  5970157 ataatttgaaaaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacac 5970092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 16766707 - 16766772
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    ||||||||| ||||| |||||||||||||||||||||| ||||||||| || || |||||||||||    
T  16766707 ataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacac 16766772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 7977879 - 7977832
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||    
T  7977879 ataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgt 7977832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 9522901 - 9522963
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcgga 63  Q
    ||||||| | ||||| |||||||||||||||||||||| |||||||||||| || ||||||||    
T  9522901 ataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgttgtgtcggtgtcgga 9522963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 25038120 - 25038070
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgt 51  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||| ||||    
T  25038120 ataatttgagaaaattacataatttagtgtaattacaaatgtcggtattgt 25038070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 9107419 - 9107354
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    ||||||||| ||||| ||| |||||||||||||||||| ||||||||| || || |||||||||||    
T  9107419 ataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacac 9107354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 8714000 - 8714055
Alignment:
Q  11 aaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    ||||| |||||||||||||||||||||||||| ||||| || || |||||||||||    
T  8714000 aaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacac 8714055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 10770723 - 10770676
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| |||||||||||||||||||||| |||||||||    
T  10770723 ataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgt 10770676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 12696334 - 12696381
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| |||||||||||||||||||||||||||| |||| ||||    
T  12696334 ataatttgaaaaaattacataattcagtgtaattacaagtgtcagtgt 12696381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 28715305 - 28715352
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| |||||||||||||||||||||| |||||||||    
T  28715305 ataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgt 28715352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 34595144 - 34595191
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| |||||||||||||||||||||| |||||||||    
T  34595144 ataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgt 34595191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 1532250 - 1532284
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaatta 35  Q
    |||||||||||||||||||||||||||||||||||    
T  1532250 ataatttgataaaattacataattcagtgtaatta 1532284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 4118382 - 4118317
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    ||||||||| ||||| |||||||| | ||||||||||| ||| ||| |||| ||||||||||||||    
T  4118382 ataatttgaaaaaatcacataattaaatgtaattacaagtgttggttttgtgtcagtgtcggacac 4118317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 16833318 - 16833366
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgtt 49  Q
    ||||||||| ||||| ||||| |||||||||||||||| ||||||||||    
T  16833318 ataatttgaaaaaatcacatacttcagtgtaattacaagtgtcggtgtt 16833366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 6898330 - 6898283
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    |||||||||  ||||||||||||| ||||||||||||| |||||||||    
T  6898330 ataatttgaacaaattacataattaagtgtaattacaagtgtcggtgt 6898283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 7801205 - 7801158
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| ||||||||||| |||||||||| |||||||||    
T  7801205 ataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgt 7801158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 15489781 - 15489734
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||||||| |||||| ||||||||||| |||||||||    
T  15489781 ataatttgaaaaaattacacaattcaatgtaattacaagtgtcggtgt 15489734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 48
Target Start/End: Complemental strand, 27904069 - 27904038
Alignment:
Q  17 acataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||||||||||||||||||||||||||    
T  27904069 acataattcagtgtaattacaaatgtcggtgt 27904038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 28152109 - 28152155
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| |||||||||||||||||||||| |||||||||    
T  28152109 ataatttga-aaaatcacataattcagtgtaattacaagtgtcggtgt 28152155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 31384930 - 31384977
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| |||||||||||||||||||||| |||| ||||    
T  31384930 ataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgt 31384977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 7569217 - 7569183
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaatta 35  Q
    ||||||||| |||||||||||||||||||||||||    
T  7569217 ataatttgagaaaattacataattcagtgtaatta 7569183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 17341713 - 17341679
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaatta 35  Q
    ||||||||||||||| |||||||||||||||||||    
T  17341713 ataatttgataaaatcacataattcagtgtaatta 17341679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 8365568 - 8365503
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    ||||||||| || || ||||||||| |||||||||||| ||||||||| || || || ||||||||    
T  8365568 ataatttgaaaatatcacataattcggtgtaattacaagtgtcggtgtcgtgtcggtatcggacac 8365503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 17435209 - 17435246
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaa 38  Q
    ||||||| | ||||||||||||||||||||||||||||    
T  17435209 ataattttaaaaaattacataattcagtgtaattacaa 17435246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 48
Target Start/End: Original strand, 23771598 - 23771635
Alignment:
Q  11 aaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  23771598 aaaattatatacttcagtgtaattacaaatgtcggtgt 23771635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 48
Target Start/End: Complemental strand, 31429042 - 31429005
Alignment:
Q  11 aaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||| |||||||||||||||||||||||||| |||||    
T  31429042 aaaatcacataattcagtgtaattacaaatgtaggtgt 31429005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 6349786 - 6349750
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattaca 37  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  6349786 ataatttgaaaaaattacataattcattgtaattaca 6349750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 48
Target Start/End: Complemental strand, 9911566 - 9911530
Alignment:
Q  12 aaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    |||| |||||||||||||||||||||| |||||||||    
T  9911566 aaatcacataattcagtgtaattacaagtgtcggtgt 9911530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 31959169 - 31959213
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcgg 45  Q
    ||||||||| ||||| ||||||| |||||||||||||| ||||||    
T  31959169 ataatttgaaaaaatcacataatgcagtgtaattacaagtgtcgg 31959213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 41633745 - 41633803
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgt 59  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||| ||||| ||||    
T  41633745 ataatttgaaaaatttacataattcagtgtaattacaaatgtcggtgtcgtatcggtgt 41633803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 19579711 - 19579776
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    ||||||||| ||||| |||||||| |||| |||||||| ||||||||| || ||||||||||||||    
T  19579711 ataatttgagaaaatcacataatttagtgcaattacaagtgtcggtgtcgtgtcagtgtcggacac 19579776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 21522760 - 21522825
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    ||||||| | ||||| |||||||||||||||||||||| ||||||||| || || |||||||||||    
T  21522760 ataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacac 21522825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 21533326 - 21533391
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    ||||||| | ||||| |||||||||||||||||||||| ||||||||| || || |||||||||||    
T  21533326 ataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacac 21533391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 39698551 - 39698616
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    ||||||||| ||||| |||||||||||||||||||||| |||| |||| || || |||||||||||    
T  39698551 ataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacac 39698616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 6247632 - 6247679
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| |||||||||||||||||||||| |||||||||    
T  6247632 ataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgt 6247679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 21191105 - 21191058
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| |||||||||||||||||||||| |||||||||    
T  21191105 ataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgt 21191058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 27932245 - 27932284
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaat 40  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  27932245 ataatttgagaaaattacataattcagtgtaattacaaat 27932284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 43001810 - 43001856
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtg 47  Q
    ||||||||| |||||||||||||||||||||||||||| ||| ||||    
T  43001810 ataatttgaaaaaattacataattcagtgtaattacaagtgttggtg 43001856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 3966513 - 3966578
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    ||||||||| ||||| ||| ||||||||||||||| |  ||||||||| || ||||||||||||||    
T  3966513 ataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacac 3966578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 6326345 - 6326304
Alignment:
Q  2 taatttgataaaattacataattcagtgtaattacaaatgtc 43  Q
    |||||||| |||||||||||||||||||||||||||| ||||    
T  6326345 taatttgagaaaattacataattcagtgtaattacaagtgtc 6326304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 21542056 - 21542105
Alignment:
Q  17 acataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    |||||||||||||||||||||| ||||||||| || || |||||||||||    
T  21542056 acataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacac 21542105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 24906350 - 24906305
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggt 46  Q
    ||||||||| ||||| |||||||||||||||||||||| |||||||    
T  24906350 ataatttgaaaaaatgacataattcagtgtaattacaagtgtcggt 24906305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 8420037 - 8420084
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| |||||||||| ||||||||||| |||||||||    
T  8420037 ataatttgaaaaaataacataattcaatgtaattacaagtgtcggtgt 8420084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 13287448 - 13287401
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| |||||||||||||||| ||||| |||||||||    
T  13287448 ataatttgaaaaaatcacataattcagtgtaactacaagtgtcggtgt 13287401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 21576794 - 21576751
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcg 44  Q
    ||||||||| ||||| |||||||||||||||||||||| |||||    
T  21576794 ataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 21576751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 42893370 - 42893417
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| ||||||| |||||||||||||| |||||||||    
T  42893370 ataatttgaaaaaatcacataatccagtgtaattacaagtgtcggtgt 42893417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 5468027 - 5467993
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaatta 35  Q
    ||||||||||||||| |||||||||||||||||||    
T  5468027 ataatttgataaaatcacataattcagtgtaatta 5467993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 7677715 - 7677780
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    ||||||||| ||||| ||||||||||||| ||||| || ||||||||| || || ||||| |||||    
T  7677715 ataatttgaaaaaatcacataattcagtgcaattagaagtgtcggtgtcgtgtcggtgtctgacac 7677780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 48
Target Start/End: Original strand, 15884008 - 15884045
Alignment:
Q  11 aaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||| |||||||||||||||||||||| |||||||||    
T  15884008 aaaatcacataattcagtgtaattacaagtgtcggtgt 15884045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 30098336 - 30098401
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    ||||||||| ||||| |||||||||| |||||||| | |||||||| | |  ||||||||||||||    
T  30098336 ataatttgagaaaatcacataattcaatgtaattatagatgtcggtatcgagtcagtgtcggacac 30098401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 30185851 - 30185900
Alignment:
Q  11 aaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtc 60  Q
    |||||||||||||||| |||||| ||||||||| || | |||||||||||    
T  30185851 aaaattacataattcactgtaataacaaatgtcagtctcgtatcagtgtc 30185900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 37328893 - 37328828
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    ||||||||  ||||| ||| |||||||||||||||||  ||||||||| || || |||||||||||    
T  37328893 ataatttgtaaaaatcacaaaattcagtgtaattacatgtgtcggtgtcgtgtcggtgtcggacac 37328828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 40131631 - 40131684
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatc 54  Q
    ||||||||| ||||| |||||||||||| |||||| |||| ||||||| |||||    
T  40131631 ataatttgaaaaaatcacataattcagtttaattataaatatcggtgtcgtatc 40131684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 14674279 - 14674323
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcgg 45  Q
    ||||||||| ||||| |||||||| ||||||||||||| ||||||    
T  14674279 ataatttgaaaaaatcacataatttagtgtaattacaagtgtcgg 14674323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 85
Target Start/End: Complemental strand, 21351938 - 21351870
Alignment:
Q  17 acataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacaccgggacacgccaaatccga 85  Q
    |||||||||||||||||||||| |||||||||  | || ||||| ||||| || ||||| | |||||||    
T  21351938 acataattcagtgtaattacaagtgtcggtgtcatgtcggtgtccgacactggaacacgtctaatccga 21351870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 24339652 - 24339717
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    ||||||||| ||||| |||||||||||||||||||||| ||||||||| || || |||||||||||    
T  24339652 ataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacac 24339717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 11272637 - 11272550
Alignment:
Q  1 ataatttgataaaattacata--attcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac-cgggacacgccaaatccga 85  Q
    ||||||||| ||||| |||||  ||||||||||||||||| ||||||||| || || ||||||||||| ||||||||||| |||||||    
T  11272637 ataatttgaaaaaatcacatataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgcgggacacgcctaatccga 11272550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 21880162 - 21880209
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||    
T  21880162 ataatttgagaaaattacataattcagtgtaattacaagtgtcggtgt 21880209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 27945051 - 27945098
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||    
T  27945051 ataatttgagaaaattacataattcagtgtaattacaagtgtcggtgt 27945098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 9408383 - 9408318
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    ||||||||| ||||| |||||||| ||||||||||||| ||||||||| ||||| ||||| |||||    
T  9408383 ataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtatcggtgtcagacac 9408318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 28155580 - 28155627
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||||||||||||| |||||||||||| |||||||||    
T  28155580 ataatttgagaaaattacataattcggtgtaattacaagtgtcggtgt 28155627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 6028635 - 6028700
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    ||||||||| || || |||||||| | ||||||||||||||||||||| || ||||||||| ||||    
T  6028635 ataatttgaaaatataacataatttaatgtaattacaaatgtcggtgtcgtgtcagtgtcgaacac 6028700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 15902832 - 15902897
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    ||||||||||||||| |||||||| |||||||||| |  |||||||||||| || || ||||||||    
T  15902832 ataatttgataaaatcacataatttagtgtaattatatgtgtcggtgttgtgtcggtatcggacac 15902897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 21560523 - 21560572
Alignment:
Q  11 aaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtc 60  Q
    ||||| |||||||||||||||||||||| ||||||||| ||||| |||||    
T  21560523 aaaatcacataattcagtgtaattacaagtgtcggtgtcgtatcggtgtc 21560572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 26033510 - 26033465
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggt 46  Q
    ||||||||| ||||| |||||||||||||||||||||| |||||||    
T  26033510 ataatttgaaaaaatcacataattcagtgtaattacaagtgtcggt 26033465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 48
Target Start/End: Complemental strand, 32094059 - 32094022
Alignment:
Q  11 aaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  32094059 aaaatcacataattcagtgtaattacaaatgtcggtgt 32094022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 12843224 - 12843188
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattaca 37  Q
    |||||||||||||||||||||||||| ||||||||||    
T  12843224 ataatttgataaaattacataattcaatgtaattaca 12843188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 30813822 - 30813858
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattaca 37  Q
    ||||||||| |||||||||||||||||||||||||||    
T  30813822 ataatttgagaaaattacataattcagtgtaattaca 30813858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 3991334 - 3991381
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| |||||||||||| ||||||||| |||||||||    
T  3991334 ataatttgaaaaaatcacataattcagtataattacaagtgtcggtgt 3991381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 5409885 - 5409838
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| ||||||||||||| |||||||| |||||||||    
T  5409885 ataatttgaaaaaatcacataattcagtgcaattacaagtgtcggtgt 5409838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 7438716 - 7438763
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| |||||||||| ||||||||||| |||||||||    
T  7438716 ataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgt 7438763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 9778510 - 9778557
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| |||||||||||| ||||||||| |||||||||    
T  9778510 ataatttgaaaaaatcacataattcagtataattacaagtgtcggtgt 9778557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 13770701 - 13770744
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcg 44  Q
    ||||||| | |||||||||||||||||||||||||||| |||||    
T  13770701 ataatttaaaaaaattacataattcagtgtaattacaagtgtcg 13770744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 25481912 - 25481959
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| |||||||||||||||||||||| ||| |||||    
T  25481912 ataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgt 25481959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 1885587 - 1885656
Alignment:
Q  5 tttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacaccgggacac 74  Q
    ||||| ||||| |||||||||| |||||| |||| ||||||||| || |  |||||||||||| ||||||    
T  1885587 tttgaaaaaatgacataattcaatgtaatcacaagtgtcggtgtcgtgttggtgtcggacaccaggacac 1885656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 48
Target Start/End: Original strand, 18039019 - 18039056
Alignment:
Q  11 aaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||| |||||||||||||||||||||| |||||||||    
T  18039019 aaaatcacataattcagtgtaattacaagtgtcggtgt 18039056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 25822685 - 25822730
Alignment:
Q  21 aattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    |||||||||||||||||| ||||||||| ||||| || ||||||||    
T  25822685 aattcagtgtaattacaagtgtcggtgtcgtatcggtatcggacac 25822730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 24105688 - 24105732
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcgg 45  Q
    ||||||||| |||||| ||| ||||||||||||||||| ||||||    
T  24105688 ataatttgaaaaaattgcatgattcagtgtaattacaagtgtcgg 24105732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 11596401 - 11596320
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacaccgggacacgccaaatc 82  Q
    ||||||||| ||||| |||||||||||||||||||||| ||| ||||| || ||| |||| |||| ||||||||||| ||||    
T  11596401 ataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcgtgtcattgtccgacatcgggacacgcctaatc 11596320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 29205454 - 29205503
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttg 50  Q
    ||||||||| ||||| |||||||||||||||||||||| |||||||||||    
T  29205454 ataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgttg 29205503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 8423767 - 8423720
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| ||||||||||||||||||| ||||||||||||    
T  8423767 ataatttgagaaaatcacataattcagtgtaattataaatgtcggtgt 8423720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 21945513 - 21945560
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| |||||||||||||||||||||| |||||||||    
T  21945513 ataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgt 21945560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 30838220 - 30838283
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggac 64  Q
    ||||||||||||||||| |||||| |||||||||| || | ||||||| || ||||||||||||    
T  30838220 ataatttgataaaattatataatttagtgtaattataagtatcggtgtcgtgtcagtgtcggac 30838283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 847961 - 848008
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| |||||||||||||||| | ||||||||| |||||||||    
T  847961 ataatttgagaaaattacataattcactataattacaagtgtcggtgt 848008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 2362024 - 2361977
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| |||||||||||||| |||||||||| || |||||||||    
T  2362024 ataatttgaaaaaattacataatttagtgtaattaaaagtgtcggtgt 2361977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 4383378 - 4383424
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| ||||||||||||||||||||||||||| ||||    
T  4383378 ataatttga-aaaatcacataattcagtgtaattacaaatgtcagtgt 4383424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 6485660 - 6485613
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| |||||||| ||||||||||||| |||||||||    
T  6485660 ataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgt 6485613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 12797386 - 12797340
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| |||||||||||||||||||||| |||||||||    
T  12797386 ataatttga-aaaatcacataattcagtgtaattacaagtgtcggtgt 12797340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 23293035 - 23292988
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| |||||||||||| ||||||||| |||||||||    
T  23293035 ataatttgaaaaaatcacataattcagtataattacaagtgtcggtgt 23292988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 28964297 - 28964250
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| |||||||||||||||||||||| |||| ||||    
T  28964297 ataatttgaaaaaatcacataattcagtgtaattacaagtgtctgtgt 28964250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 54580072 - 54580025
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| ||||||||||||||||||| || |||||||||    
T  54580072 ataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgt 54580025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 12708175 - 12708241
Alignment:
Q  19 ataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacaccgggacacgccaaatccga 85  Q
    |||||||||||||||||||| ||||| ||| || ||  ||||||||| ||| ||||||| |||||||    
T  12708175 ataattcagtgtaattacaagtgtcgatgtcgtgtctatgtcggacatcggaacacgcctaatccga 12708241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 24343517 - 24343551
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaatta 35  Q
    ||||||||| |||||||||||||||||||||||||    
T  24343517 ataatttgagaaaattacataattcagtgtaatta 24343551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 85
Target Start/End: Original strand, 42640549 - 42640623
Alignment:
Q  11 aaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacaccgggacacgccaaatccga 85  Q
    ||||| |||||||||||||||||||||| ||||||||| | |   ||||| | |||| ||||||||| |||||||    
T  42640549 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgtgtccggcaccaggacacgcctaatccga 42640623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 48
Target Start/End: Original strand, 30298967 - 30299004
Alignment:
Q  11 aaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||| |||||||||||||||||||||| |||||||||    
T  30298967 aaaatgacataattcagtgtaattacaagtgtcggtgt 30299004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 48
Target Start/End: Original strand, 30327835 - 30327872
Alignment:
Q  11 aaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||| |||||||||||||||||||||| |||||||||    
T  30327835 aaaatgacataattcagtgtaattacaagtgtcggtgt 30327872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 51701268 - 51701305
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaa 38  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  51701268 ataatttgaaaaaattacataattgagtgtaattacaa 51701305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 1509549 - 1509630
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacaccgggacacgccaaatc 82  Q
    ||||||||| ||||| |||||||| ||||||||||||| ||||||||| || || ||||| |||||||| ||||||| ||||    
T  1509549 ataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtttcggtgtccgacaccggtacacgcctaatc 1509630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 34910327 - 34910391
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggaca 65  Q
    ||||||||| ||||| ||||||||||||||||||||||  |||||||| ||||| ||||||||||    
T  34910327 ataatttgaaaaaatcacataattcagtgtaattacaagagtcggtgtcgtatcggtgtcggaca 34910391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 20503475 - 20503524
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttg 50  Q
    ||||||||| ||||| |||||||||||||||||||||| |||||||||||    
T  20503475 ataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgttg 20503524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 28918011 - 28918058
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| |||||||||||||||||||||| |||||||||    
T  28918011 ataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgt 28918058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 17005668 - 17005618
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgt 51  Q
    ||||||||||||||| | ||||||||||||||||| || ||||||||||||    
T  17005668 ataatttgataaaatcatataattcagtgtaattataagtgtcggtgttgt 17005618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 26508120 - 26508166
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtg 47  Q
    ||||||||| ||||| |||||||||||||||||||||| ||||||||    
T  26508120 ataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtg 26508166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 14209123 - 14209188
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    ||||||| | ||||| |||||||||||||||||||||| |||| |||| || || |||||||||||    
T  14209123 ataattttaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacac 14209188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 15796343 - 15796278
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    ||||||||| ||||| | |||||||||||||||||||| ||||||||| || |  |||||||||||    
T  15796343 ataatttgaaaaaatcatataattcagtgtaattacaattgtcggtgtcgtgtaggtgtcggacac 15796278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 4991012 - 4990972
Alignment:
Q  5 tttgataaaattacataattcagtgtaattacaaatgtcgg 45  Q
    ||||| |||||||||||||||||||||||||||| ||||||    
T  4991012 tttgagaaaattacataattcagtgtaattacaagtgtcgg 4990972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 8039884 - 8039820
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggaca 65  Q
    ||||||||| ||||||| ||||||||||||||||| |  ||||||||| || || ||||||||||    
T  8039884 ataatttgagaaaattatataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggaca 8039820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 10954962 - 10955009
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| ||||||||||||||||| |||| |||||||||    
T  10954962 ataatttgaaaaaatcacataattcagtgtaatcacaagtgtcggtgt 10955009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 49651835 - 49651788
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| |||||||||| ||||||||||| |||||||||    
T  49651835 ataatttgaaaaaatcacataattcactgtaattacaagtgtcggtgt 49651788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 51206402 - 51206355
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| |||||||||||||||| ||||| |||||||||    
T  51206402 ataatttgaaaaaatcacataattcagtgtaaatacaagtgtcggtgt 51206355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 55401085 - 55401132
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| |||||||| ||||||||||||| |||||||||    
T  55401085 ataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgt 55401132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 4987340 - 4987294
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtg 47  Q
    ||||||||| ||||| |||||||||||||||||||||| ||| ||||    
T  4987340 ataatttgaaaaaatcacataattcagtgtaattacaagtgttggtg 4987294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 8587069 - 8587023
Alignment:
Q  2 taatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    |||||||| ||||| |||||||| ||||||||||||| |||||||||    
T  8587069 taatttgaaaaaatcacataattaagtgtaattacaagtgtcggtgt 8587023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 21257035 - 21256990
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggt 46  Q
    ||||||||| ||||| |||||||||||| ||||||||| |||||||    
T  21257035 ataatttgaaaaaatcacataattcagtataattacaagtgtcggt 21256990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 30184145 - 30184104
Alignment:
Q  11 aaaattacataattcagtgtaattacaaatgtcggtgttgta 52  Q
    ||||| |||||||||||||||||||||  |||||||||||||    
T  30184145 aaaatgacataattcagtgtaattacatgtgtcggtgttgta 30184104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 16789022 - 16789086
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggaca 65  Q
    ||||||| | ||||| | ||||||||||||||||| || ||| ||||| || |||||||||||||    
T  16789022 ataatttaaaaaaatcatataattcagtgtaattataagtgttggtgtcgtgtcagtgtcggaca 16789086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 25775518 - 25775566
Alignment:
Q  1 ataatttgataa-aattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| || ||| |||||||||||||||||||||| |||||||||    
T  25775518 ataatttgaaaataatcacataattcagtgtaattacaagtgtcggtgt 25775566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 33006833 - 33006865
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaat 33  Q
    |||||||||||||||||||||||||||| ||||    
T  33006833 ataatttgataaaattacataattcagtttaat 33006865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 34185172 - 34185108
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggaca 65  Q
    ||||||| | ||||| ||| |||||||||||||||||| ||||||||| || ||  |||||||||    
T  34185172 ataatttcaaaaaatcacacaattcagtgtaattacaagtgtcggtgtcgtgtccatgtcggaca 34185108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 6612220 - 6612155
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||| || ||  ||||||||||    
T  6612220 ataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcgtgtcgatgtcggacac 6612155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 113309 - 113392
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacaccgggacacgccaaatccga 85  Q
    ||||||||| ||||| |||||||||||||||||||||| ||| ||||| || || |||||  ||||||||||||||| |||||||    
T  113309 ataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcgtgtc-gtgtccaacaccgggacacgcctaatccga 113392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 1705041 - 1704957
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatca--gtgtcggacaccgggacacgccaaatcc 83  Q
    ||||||||| ||||| ||||||||||| |||||||||| ||||||||| || |||  ||||| ||||||| |||||||| |||||    
T  1705041 ataatttgaaaaaatcacataattcagggtaattacaagtgtcggtgtcgtgtcaacgtgtccgacaccgagacacgcctaatcc 1704957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 21378588 - 21378637
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttg 50  Q
    |||| |||| |||||||||||||||||||||||||||| |||||||||||    
T  21378588 ataaattgaaaaaattacataattcagtgtaattacaagtgtcggtgttg 21378637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 47989507 - 47989572
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    ||||||| | ||||| |||||||||||||||||||||| ||||||||| || || |||||||||||    
T  47989507 ataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacac 47989572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 18190157 - 18190114
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcg 44  Q
    ||||||||| |||||||||||||||||||||||||||| |||||    
T  18190157 ataatttgaaaaaattacataattcagtgtaattacaagtgtcg 18190114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 18337339 - 18337386
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| |||||||||||||||||||||| |||||||||    
T  18337339 ataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgt 18337386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 24577235 - 24577188
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| |||||||||||||||||||||| |||||||||    
T  24577235 ataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgt 24577188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 40258982 - 40258935
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| |||||||||||||||||||||| |||||||||    
T  40258982 ataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgt 40258935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 41877519 - 41877472
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| |||||||||||||| ||||||||||||| |||||||||    
T  41877519 ataatttgagaaaattacataatttagtgtaattacaagtgtcggtgt 41877472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 44482240 - 44482305
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    ||||||||| ||||| ||||||||||||||||||| |  ||||||||| || || |||||||||||    
T  44482240 ataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacac 44482305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 15449279 - 15449216
Alignment:
Q  2 taatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    |||||||| ||||| |||||||| ||||||||||||| |||| |||| ||||| |||||||||||    
T  15449279 taatttga-aaaatcacataatttagtgtaattacaagtgtctgtgtcgtatcggtgtcggacac 15449216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 31015053 - 31015097
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcgg 45  Q
    ||||||||| ||||| |||||||||||||||||||||| ||||||    
T  31015053 ataatttgagaaaatcacataattcagtgtaattacaagtgtcgg 31015097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 1486758 - 1486711
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| ||||||||||||||||||| || |||||||||    
T  1486758 ataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgt 1486711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 22515936 - 22515889
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| |||||||| ||||||||||||| |||||||||    
T  22515936 ataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgt 22515889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 22881665 - 22881618
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| |||||||| ||||||||||||| |||||||||    
T  22881665 ataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgt 22881618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 30173801 - 30173746
Alignment:
Q  11 aaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    |||||||||||| ||||||||||||||| ||||||||| || || || ||||||||    
T  30173801 aaaattacataactcagtgtaattacaagtgtcggtgtcgtgtccgtatcggacac 30173746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 31694749 - 31694694
Alignment:
Q  11 aaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    ||||| |||||||||||| ||||||||| ||||||||| || || |||||||||||    
T  31694749 aaaatcacataattcagtataattacaagtgtcggtgtcgtgtcggtgtcggacac 31694694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 38078710 - 38078663
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| |||||||||| ||||||||||| |||||||||    
T  38078710 ataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgt 38078663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 42359498 - 42359451
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| ||| |||||||||||||||||| |||||||||    
T  42359498 ataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgt 42359451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 28273134 - 28273072
Alignment:
Q  4 atttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    |||||| ||||| | |||||||||||||||||||| |||||||||  ||||  ||||||||||    
T  28273134 atttgaaaaaatcatataattcagtgtaattacaagtgtcggtgtcctatcgatgtcggacac 28273072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 48
Target Start/End: Original strand, 1815277 - 1815314
Alignment:
Q  11 aaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||| |||||||||||||||||||||| |||||||||    
T  1815277 aaaatcacataattcagtgtaattacaagtgtcggtgt 1815314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 1864929 - 1864880
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttg 50  Q
    ||||||||| ||||| ||||||||||||||||||| |  |||||||||||    
T  1864929 ataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgttg 1864880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 5376549 - 5376484
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    ||||||| | ||||| ||||||||||||||||||| || ||||||||| || ||  ||||||||||    
T  5376549 ataatttaagaaaataacataattcagtgtaattaaaagtgtcggtgtcgtgtcgatgtcggacac 5376484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 9629949 - 9629884
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    ||||||||||||||| | |||||||||||| |||| || ||||||||| || ||  ||||||||||    
T  9629949 ataatttgataaaatcatataattcagtgtgattataagtgtcggtgtcgtgtcgatgtcggacac 9629884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 9828054 - 9828087
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaatt 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  9828054 ataatttgataaaatcacataattcagtgtaatt 9828087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 25361896 - 25361961
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    ||||||||| ||||| ||||||||||||||||||| |  |||| |||| || || |||||||||||    
T  25361896 ataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtcggtgtcggacac 25361961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 37055905 - 37055868
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaa 38  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  37055905 ataatttgagaaaattacataatttagtgtaattacaa 37055868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 48
Target Start/End: Original strand, 51410045 - 51410082
Alignment:
Q  11 aaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||| |||||||||||||||||||||| |||||||||    
T  51410045 aaaatcacataattcagtgtaattacaagtgtcggtgt 51410082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 2851031 - 2851059
Alignment:
Q  1 ataatttgataaaattacataattcagtg 29  Q
    |||||||||||||||||||||||||||||    
T  2851031 ataatttgataaaattacataattcagtg 2851059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 14332420 - 14332484
Alignment:
Q  3 aatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacacc 67  Q
    ||||||| ||||| |||||||||| |||||| ||| ||||||||||||  |  ||||||||||||    
T  14332420 aatttgagaaaatgacataattcaatgtaatcacatatgtcggtgttgcgttggtgtcggacacc 14332484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 46914084 - 46914013
Alignment:
Q  5 tttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacaccgggacacgcc 77  Q
    ||||| ||||| |||||||||| |||||||| |||||||||| |  | ||| |||| ||||||||||||||||    
T  46914084 tttgagaaaataacataattcaatgtaattataaatgtcggtatcatgtca-tgtccgacaccgggacacgcc 46914013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 48450636 - 48450592
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcgg 45  Q
    ||||||||| ||||| |||||||| ||||||||||||| ||||||    
T  48450636 ataatttgaaaaaataacataatttagtgtaattacaagtgtcgg 48450592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 46692 - 46739
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  46692 ataatttgaaaaaatcacataattcagtgtaattacaaatgtcggtgt 46739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 63783 - 63830
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||||||||||||||||| |||||||| |||||||||    
T  63783 ataatttgagaaaattacataattcagtgcaattacaagtgtcggtgt 63830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000004; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 15657874 - 15657921
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||  ||||| ||||||||||||||||||||||||||||||||    
T  15657874 ataatttgtaaaaatcacataattcagtgtaattacaaatgtcggtgt 15657921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 15972883 - 15972930
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||||||| |||||||||||||||||| |||||||||    
T  15972883 ataatttgaaaaaattacacaattcagtgtaattacaagtgtcggtgt 15972930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 18841062 - 18841015
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| |||||||||||||| ||||||||||||| |||||||||    
T  18841062 ataatttgaaaaaattacataattaagtgtaattacaagtgtcggtgt 18841015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 30335427 - 30335474
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| |||||||| |||||||||||||||||||||||    
T  30335427 ataatttgaaaaaatgacataatttagtgtaattacaaatgtcggtgt 30335474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 21374748 - 21374706
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtc 43  Q
    ||||||||| |||||||||||||||||||||||||||| ||||    
T  21374748 ataatttgaaaaaattacataattcagtgtaattacaagtgtc 21374706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 39323274 - 39323316
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtc 43  Q
    ||||||||| |||||||||||||||||||||||||||| ||||    
T  39323274 ataatttgacaaaattacataattcagtgtaattacaagtgtc 39323316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 30717579 - 30717514
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    ||||||||| ||||| |||||||||||||||||||||| ||||| ||| || ||  ||||||||||    
T  30717579 ataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacac 30717514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 37419753 - 37419818
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    ||||||||| ||||| ||| |||||||||||||||||| || |||||| || || |||||||||||    
T  37419753 ataatttgaaaaaatcacaaaattcagtgtaattacaagtgccggtgtcgtgtcggtgtcggacac 37419818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 30404899 - 30404855
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcgg 45  Q
    ||||||||| ||||| |||||||||||||||||||||| ||||||    
T  30404899 ataatttgaaaaaatcacataattcagtgtaattacaagtgtcgg 30404855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 2438768 - 2438721
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||| | ||||| |||||||||||||||||||||| |||||||||    
T  2438768 ataatttcaaaaaatcacataattcagtgtaattacaagtgtcggtgt 2438721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 48
Target Start/End: Complemental strand, 11223908 - 11223865
Alignment:
Q  5 tttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||| ||||| |||||||||||||||||||||| |||||||||    
T  11223908 tttgaaaaaataacataattcagtgtaattacaagtgtcggtgt 11223865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 12668472 - 12668425
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| ||||||||||||||||||| || |||||||||    
T  12668472 ataatttgaaaaaatgacataattcagtgtaattataagtgtcggtgt 12668425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 12940984 - 12940941
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcg 44  Q
    ||||||||| ||||| | ||||||||||||||||||||||||||    
T  12940984 ataatttgaaaaaatcatataattcagtgtaattacaaatgtcg 12940941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 11 - 85
Target Start/End: Complemental strand, 23058481 - 23058404
Alignment:
Q  11 aaaattacataattcagtgtaattacaaatgtcggtgttgtatcag---tgtcggacaccgggacacgccaaatccga 85  Q
    ||||| ||||||| |||||||||||||| ||||||||| || || |   |||| |||||||||||||||| |||||||    
T  23058481 aaaatcacataatccagtgtaattacaagtgtcggtgtcgtgtcggtgttgtccgacaccgggacacgcctaatccga 23058404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 23921263 - 23921302
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaat 40  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  23921263 ataatttgagaaaattacataattcagtgtaattataaat 23921302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 42832325 - 42832278
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||||||||| ||||||||||||| || |||||||||    
T  42832325 ataatttgagaaaattacatatttcagtgtaattataagtgtcggtgt 42832278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 28412360 - 28412394
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaatta 35  Q
    ||||||||||||||| |||||||||||||||||||    
T  28412360 ataatttgataaaatcacataattcagtgtaatta 28412394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 48
Target Start/End: Complemental strand, 19536436 - 19536399
Alignment:
Q  11 aaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||| |||||||||||||||||||||| |||||||||    
T  19536436 aaaatcacataattcagtgtaattacaagtgtcggtgt 19536399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 36756393 - 36756328
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    |||||||||  |||| ||||||||||||||||||| || ||||||||| || | ||||||| ||||    
T  36756393 ataatttgaagaaataacataattcagtgtaattataagtgtcggtgtcgtgttagtgtcgaacac 36756328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 18420483 - 18420419
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggaca 65  Q
    ||||||||| ||||| |||||||||| || ||||| || |||||||||||| ||  |||||||||    
T  18420483 ataatttgagaaaatcacataattcaatgcaattataagtgtcggtgttgtgtccatgtcggaca 18420419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 83180 - 83222
Alignment:
Q  11 aaaattacataattcagtgtaattacaaatgtcggtgttgtat 53  Q
    ||||| |||||||||||||||||||||||||||||||| ||||    
T  83180 aaaatgacataattcagtgtaattacaaatgtcggtgtcgtat 83222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 92817 - 92859
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtc 43  Q
    ||||||||| |||||||||||||||||||||||||||| ||||    
T  92817 ataatttgagaaaattacataattcagtgtaattacaagtgtc 92859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 19164 - 19228
Alignment:
Q  11 aaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacaccgggacacg 75  Q
    ||||| |||||||||||||| |||| |||||||||||| || ||||| ||||||| ||| |||||    
T  19164 aaaatgacataattcagtgtgattaaaaatgtcggtgtcgtgtcagtatcggacatcggaacacg 19228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 53190 - 53254
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggaca 65  Q
    ||||||||| ||||| ||||||||||||||||||| || ||||||||  || || ||||||||||    
T  53190 ataatttgagaaaatcacataattcagtgtaattataagtgtcggtgccgtgtcggtgtcggaca 53254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 511 - 464
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| ||| |||||||||||||||||| |||||||||    
T  511 ataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgt 464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 20182 - 20229
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| |||||||||||||||||||||| |||| ||||    
T  20182 ataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgt 20229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 70288 - 70335
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| ||||||||||||||||||| || |||||||||    
T  70288 ataatttgaaaaaataacataattcagtgtaattataagtgtcggtgt 70335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 17798 - 17751
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||||||| ||||| |||||||| ||||||||||||| |||||||||    
T  17798 ataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgt 17751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 11 - 50
Target Start/End: Complemental strand, 174592 - 174553
Alignment:
Q  11 aaaattacataattcagtgtaattacaaatgtcggtgttg 50  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  174592 aaaatgacataattcagcgtaattacaaatgtcggtgttg 174553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 11 - 50
Target Start/End: Complemental strand, 180105 - 180066
Alignment:
Q  11 aaaattacataattcagtgtaattacaaatgtcggtgttg 50  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  180105 aaaatgacataattcagcgtaattacaaatgtcggtgttg 180066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 130496 - 130538
Alignment:
Q  5 tttgataaaattacataattcagtgtaattacaaatgtcggtg 47  Q
    ||||| ||||| |||||||||||||||||||||| ||||||||    
T  130496 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtg 130538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 192298 - 192256
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtc 43  Q
    ||||||||| ||||||||||||||| |||||||||||| ||||    
T  192298 ataatttgagaaaattacataattcggtgtaattacaagtgtc 192256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 8684 - 8619
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    ||||||||| || || ||||||||| || ||||||||||||||||||| || || || ||||||||    
T  8684 ataatttgaaaatatcacataattcggtataattacaaatgtcggtgtcgtgtcggtatcggacac 8619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 14540 - 14577
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaa 38  Q
    ||||||||| ||||| ||||||||||||||||||||||    
T  14540 ataatttgaaaaaatcacataattcagtgtaattacaa 14577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 3898 - 3833
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaaatgtcggtgttgtatcagtgtcggacac 66  Q
    ||||||| | ||||| |||||||||||||||||||||| |||| |||| || |  |||||||||||    
T  3898 ataatttaaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgttggtgtcggacac 3833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 51821 - 51858
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaa 38  Q
    ||||||||| ||||| ||||||||||||||||||||||    
T  51821 ataatttgaaaaaatcacataattcagtgtaattacaa 51858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 48
Target Start/End: Complemental strand, 45569 - 45532
Alignment:
Q  11 aaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  45569 aaaaatacataattcagtgtaattacaagtgtcggtgt 45532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 33412 - 33375
Alignment:
Q  1 ataatttgataaaattacataattcagtgtaattacaa 38  Q
    ||||||||| ||||| ||||||||||||||||||||||    
T  33412 ataatttgaaaaaataacataattcagtgtaattacaa 33375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 48
Target Start/End: Original strand, 23790 - 23827
Alignment:
Q  11 aaaattacataattcagtgtaattacaaatgtcggtgt 48  Q
    ||||| |||||||||||||||||||||| |||||||||    
T  23790 aaaatcacataattcagtgtaattacaagtgtcggtgt 23827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University