View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8141_high_2 (Length: 377)
Name: NF8141_high_2
Description: NF8141
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8141_high_2 |
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Alignment Details
Target: chr3 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 20 - 261
Target Start/End: Complemental strand, 7950203 - 7949962
Alignment:
| Q |
20 |
gtataatggtgttttttcacatagatgctacatctattatgactacctactaccattaactgtgacttgataaagccacacaattattagcaacctcttc |
119 |
Q |
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| T |
7950203 |
gtataatggtgttttttcacatagatgctacatctattatgactacctactaccattaactgtgacttgataaagccacacaattattagcaacctcttc |
7950104 |
T |
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| Q |
120 |
atccattaaatggttagcttacttatgagttatgatttgtaattatgtgaaacaaaattgggctaaagaacgtgtagtctcaatctaaaattattggctt |
219 |
Q |
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| T |
7950103 |
atccattaaatggttagcttacttatgagttatgatttgtaattatgtgaaacaagattgggctaaagaacgtgtagtctcaatctaaaattattggctt |
7950004 |
T |
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| Q |
220 |
gtttgtctttgaccatgtatgaaaaattttgtataattagaa |
261 |
Q |
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| T |
7950003 |
gtttgtctttgaccatgtatgaaaaactttgtataattagaa |
7949962 |
T |
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