View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8143_high_55 (Length: 215)
Name: NF8143_high_55
Description: NF8143
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8143_high_55 |
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Alignment Details
Target: chr8 (Bit Score: 163; Significance: 3e-87; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 18 - 196
Target Start/End: Original strand, 24821623 - 24821800
Alignment:
| Q |
18 |
tgtgtcagtgtcacccatgttactaaagaatgtgtgtattatatagcaaccctggtccttatcttcagtttgccctcattttagagtaacatctcaccga |
117 |
Q |
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| T |
24821623 |
tgtgtcagtgtcacccatgttactaaagaatgtgtgtattatatagcaaccctggtccttatcttcagtttgccctcattttagagtaacatctcaccga |
24821722 |
T |
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| Q |
118 |
cacaaacacaatggcactaaactccaatttctacacgcattccaaagtttttctttctttgaataagtacacccaatga |
196 |
Q |
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| T |
24821723 |
cacaaacacaatggcactaaactccaaattctacacgcattcgaaa-tttttctttctttgaataagtacacccaatga |
24821800 |
T |
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