View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8143_low_10 (Length: 472)
Name: NF8143_low_10
Description: NF8143
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8143_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 411; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 411; E-Value: 0
Query Start/End: Original strand, 17 - 458
Target Start/End: Complemental strand, 6706122 - 6705678
Alignment:
| Q |
17 |
aaacaacaataacatcaataacgacaacaacaa---taactggcttcaattaagcataggtaatacggccgtgaccacaaccacgaaacatggtcgtgat |
113 |
Q |
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|||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6706122 |
aaacaacaataacatcaataacaacaacaacaacaataactggcttcaattaagcataggtaatacggccgtgaccacaaccacgaaacatggtcgtgat |
6706023 |
T |
|
| Q |
114 |
cataaccagactccaacaagcagttcaggcttgttggagcttgagttgttaccaacaaattgggctgcttcgcggcccaatttggagcaaccatcgacca |
213 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6706022 |
cataaccagactccaacaagcagttcaggcttgctggagcttgagttgttaccaacaaattgggctgcttcgcggcccaatttggagcaaccatcgacca |
6705923 |
T |
|
| Q |
214 |
gaggttgctcaaattttaattcttctttgtttttcgaacaaacgacatcttcctcatcttcttcgtccttgtccatatctatgtcaatgccaagtggtcc |
313 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6705922 |
gaggttgctcaaattttaattcttctttgttttttgaacaaacgacatcttcctcatcttcttcgtccttgtccatatctatgtcaatgccaagtggtcc |
6705823 |
T |
|
| Q |
314 |
aacctatggtcatcaacaacaacatcaacatctagtaccacataactgggcatttggtccattattaccacactcaatggcaattaatatgccttcttct |
413 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6705822 |
aacctatggtcatcaacaacaacatcaacatctagtaccacataactgggcatttggtccattattaccacactcaatggcaattaatatgccttcttct |
6705723 |
T |
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| Q |
414 |
acagcttatgttccatcttcttctttatcacaatcttgttcttct |
458 |
Q |
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||| ||||| ||||||||||||||||||||||||||||||||||| |
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| T |
6705722 |
acatcttatattccatcttcttctttatcacaatcttgttcttct |
6705678 |
T |
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