View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8143_low_26 (Length: 344)
Name: NF8143_low_26
Description: NF8143
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8143_low_26 |
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Alignment Details
Target: chr8 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 20 - 329
Target Start/End: Complemental strand, 44298837 - 44298532
Alignment:
| Q |
20 |
ttgttatattaattaatgtaagttgtgtggaattggattaaggttttggagttaggaattgtggtgcactctgtagtgattggtttgtcattgggtgctt |
119 |
Q |
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| T |
44298837 |
ttgttatattaattaatgtaagttgtgtggaattggattaaggttttggagttaggaattgtggtgcactctgtagtgattggtttgtcattgggtgctt |
44298738 |
T |
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| Q |
120 |
cagagaaccattgcaccataaggcctctcattgctgcactttgcttccatcaactctttgaaggaatgggtttgggtggttgcatacttcaggtaatgat |
219 |
Q |
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| T |
44298737 |
cagagaaccattgcaccataaggcctctcattgctgcactttgcttccatcaactctttgaaggaatgggtttgggtggttgcatacttcaggtaatgat |
44298638 |
T |
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| Q |
220 |
tattaattccatttaatttcattgaagaatttacaatatgagcaaattattccattaatgtgacaggctgattatggaacgaagatgaaatcgacaatga |
319 |
Q |
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| T |
44298637 |
t----attccatttaatttcattgaagaatttacaatatgagcaaattattccattaatgtgacaggctgattatggaacgaagatgaaatcgacaatga |
44298542 |
T |
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| Q |
320 |
tattcttctt |
329 |
Q |
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| T |
44298541 |
tattcttctt |
44298532 |
T |
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