View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8144_high_6 (Length: 230)
Name: NF8144_high_6
Description: NF8144
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8144_high_6 |
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Alignment Details
Target: chr6 (Bit Score: 171; Significance: 6e-92; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 19 - 212
Target Start/End: Original strand, 30575858 - 30576054
Alignment:
| Q |
19 |
gacattcacacctatccacaaatctctaacagtgt---aatgtaatacaaatactacaatagaattagtaaggccggaacagtgagcaatcgagtgaaaa |
115 |
Q |
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| T |
30575858 |
gacattcacacctatccacaaatctctaacagtgtttgaatgtaatacaaatactacaatagaattagtaaggccggaacagtgagcaatcgagtgaaaa |
30575957 |
T |
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| Q |
116 |
atatacctgaaattcatataaatgttgagcaaaaacaactaccaattccaagagcagaaagttcaaccacattgtacatttttgatagagtcatatg |
212 |
Q |
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| T |
30575958 |
atatacctgaaattcataaaaatgttgagcaaaaacaactaccaattccaagagcagaaagttcaaccgcattgtacatttttgatagagccatatg |
30576054 |
T |
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