View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8144_low_7 (Length: 339)

Name: NF8144_low_7
Description: NF8144
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8144_low_7
NF8144_low_7
[»] chr2 (39 HSPs)
chr2 (76-185)||(41181371-41181479)
chr2 (79-185)||(2917620-2917725)
chr2 (76-217)||(35493340-35493480)
chr2 (75-147)||(16580478-16580550)
chr2 (87-185)||(35490625-35490722)
chr2 (79-185)||(45475377-45475482)
chr2 (75-183)||(41497405-41497512)
chr2 (74-216)||(25184830-25184970)
chr2 (76-147)||(41053736-41053807)
chr2 (76-174)||(9660097-9660194)
chr2 (79-196)||(19186684-19186800)
chr2 (76-185)||(24607599-24607707)
chr2 (79-166)||(19187273-19187359)
chr2 (74-216)||(34921759-34921899)
chr2 (77-163)||(41004464-41004549)
chr2 (76-161)||(41052615-41052699)
chr2 (79-174)||(28342460-28342554)
chr2 (75-166)||(43950291-43950381)
chr2 (79-185)||(23409532-23409637)
chr2 (74-163)||(435275-435363)
chr2 (75-147)||(24512100-24512172)
chr2 (75-147)||(41500302-41500374)
chr2 (84-147)||(34918394-34918457)
chr2 (76-163)||(41008980-41009066)
chr2 (92-147)||(43493325-43493380)
chr2 (76-170)||(2648051-2648144)
chr2 (80-133)||(82343-82396)
chr2 (74-163)||(1096527-1096615)
chr2 (76-121)||(41183305-41183350)
chr2 (77-157)||(29093892-29093971)
chr2 (76-185)||(43943627-43943731)
chr2 (76-163)||(1149406-1149492)
chr2 (76-147)||(25964738-25964809)
chr2 (75-104)||(15488253-15488282)
chr2 (85-185)||(12905492-12905591)
chr2 (79-127)||(14181901-14181949)
chr2 (99-183)||(23786081-23786164)
chr2 (73-101)||(38340779-38340807)
chr2 (79-163)||(45479847-45479930)
[»] chr5 (32 HSPs)
chr5 (75-217)||(3603147-3603288)
chr5 (71-185)||(18310052-18310165)
chr5 (75-185)||(20192286-20192395)
chr5 (76-171)||(20200193-20200287)
chr5 (79-185)||(18538366-18538471)
chr5 (79-185)||(34682194-34682299)
chr5 (79-173)||(1398541-1398634)
chr5 (76-174)||(7796595-7796692)
chr5 (75-185)||(41201661-41201770)
chr5 (76-216)||(3600270-3600410)
chr5 (74-132)||(25877554-25877612)
chr5 (79-173)||(25499930-25500025)
chr5 (73-173)||(19228689-19228788)
chr5 (76-132)||(42937126-42937182)
chr5 (80-163)||(512793-512875)
chr5 (76-163)||(39743201-39743287)
chr5 (76-213)||(17966889-17967025)
chr5 (76-141)||(31094497-31094562)
chr5 (76-124)||(26366822-26366870)
chr5 (72-216)||(34123935-34124078)
chr5 (76-159)||(42537135-42537217)
chr5 (82-132)||(1401428-1401478)
chr5 (75-121)||(8680336-8680382)
chr5 (76-165)||(30612895-30612987)
chr5 (74-163)||(27867873-27867961)
chr5 (76-165)||(30611173-30611261)
chr5 (81-166)||(33995198-33995282)
chr5 (86-134)||(35567108-35567156)
chr5 (87-174)||(33993225-33993311)
chr5 (73-163)||(41799820-41799909)
chr5 (106-163)||(8702251-8702307)
chr5 (111-163)||(28387238-28387289)
[»] chr3 (50 HSPs)
chr3 (74-185)||(7247891-7248001)
chr3 (75-185)||(2432974-2433083)
chr3 (75-217)||(41579723-41579864)
chr3 (73-216)||(52570566-52570707)
chr3 (76-183)||(55267375-55267481)
chr3 (76-187)||(7837526-7837639)
chr3 (72-166)||(52567693-52567786)
chr3 (79-216)||(29929363-29929499)
chr3 (79-216)||(29978517-29978653)
chr3 (79-217)||(19440193-19440330)
chr3 (82-187)||(66841-66944)
chr3 (76-147)||(41805743-41805814)
chr3 (76-166)||(19454375-19454464)
chr3 (79-217)||(43571684-43571821)
chr3 (76-185)||(46344871-46344979)
chr3 (75-147)||(6489266-6489338)
chr3 (79-185)||(28611131-28611236)
chr3 (79-213)||(30256006-30256139)
chr3 (85-163)||(42804398-42804475)
chr3 (79-161)||(42807655-42807736)
chr3 (79-216)||(29918341-29918477)
chr3 (79-216)||(29967494-29967630)
chr3 (76-163)||(11380375-11380461)
chr3 (76-147)||(41577009-41577080)
chr3 (73-163)||(23443159-23443248)
chr3 (79-185)||(45101879-45101984)
chr3 (74-140)||(51402473-51402539)
chr3 (83-216)||(41802939-41803071)
chr3 (76-173)||(55207706-55207802)
chr3 (87-218)||(13896874-13897004)
chr3 (76-147)||(55205271-55205342)
chr3 (75-157)||(600603-600684)
chr3 (76-141)||(44490341-44490404)
chr3 (85-214)||(48888684-48888811)
chr3 (76-133)||(6506033-6506090)
chr3 (87-132)||(7245096-7245141)
chr3 (76-133)||(32060294-32060351)
chr3 (74-135)||(43568858-43568919)
chr3 (80-216)||(42756097-42756232)
chr3 (75-135)||(44227062-44227122)
chr3 (76-160)||(51696571-51696654)
chr3 (72-135)||(47070398-47070461)
chr3 (72-122)||(41802888-41802938)
chr3 (69-163)||(48250922-48251015)
chr3 (79-157)||(55385074-55385151)
chr3 (74-147)||(11511341-11511414)
chr3 (99-212)||(49196453-49196565)
chr3 (103-187)||(7839528-7839611)
chr3 (77-133)||(34722219-34722275)
chr3 (99-163)||(49219844-49219907)
[»] chr4 (38 HSPs)
chr4 (79-185)||(29700333-29700438)
chr4 (76-185)||(49572931-49573039)
chr4 (69-185)||(21472515-21472630)
chr4 (79-185)||(37959751-37959856)
chr4 (76-161)||(44051147-44051231)
chr4 (75-216)||(4979917-4980057)
chr4 (79-166)||(4768615-4768701)
chr4 (79-185)||(955729-955834)
chr4 (79-216)||(44561330-44561466)
chr4 (79-183)||(51426474-51426577)
chr4 (74-188)||(6280789-6280902)
chr4 (79-185)||(34154433-34154538)
chr4 (75-185)||(38464797-38464905)
chr4 (79-216)||(958594-958729)
chr4 (79-135)||(44558637-44558693)
chr4 (79-166)||(21470840-21470926)
chr4 (73-163)||(50274691-50274780)
chr4 (77-146)||(4975752-4975821)
chr4 (75-216)||(9889927-9890067)
chr4 (76-217)||(11494478-11494617)
chr4 (79-128)||(48256650-48256699)
chr4 (75-163)||(39588025-39588112)
chr4 (76-124)||(46097038-46097086)
chr4 (79-135)||(49422080-49422136)
chr4 (76-185)||(8109325-8109433)
chr4 (79-185)||(34151546-34151656)
chr4 (79-125)||(3450104-3450150)
chr4 (75-133)||(6283519-6283577)
chr4 (79-125)||(18581385-18581431)
chr4 (75-121)||(28320492-28320538)
chr4 (75-121)||(46165679-46165725)
chr4 (81-159)||(51683199-51683276)
chr4 (76-157)||(16983456-16983536)
chr4 (76-105)||(44049086-44049115)
chr4 (98-166)||(18578605-18578672)
chr4 (79-127)||(24417503-24417551)
chr4 (91-147)||(51642012-51642068)
chr4 (79-135)||(51644554-51644610)
[»] chr7 (36 HSPs)
chr7 (76-187)||(48314608-48314717)
chr7 (76-218)||(46863342-46863483)
chr7 (75-174)||(21185552-21185650)
chr7 (74-173)||(28980216-28980314)
chr7 (75-166)||(36392058-36392148)
chr7 (74-163)||(34622431-34622519)
chr7 (79-185)||(9494837-9494942)
chr7 (75-217)||(46860444-46860585)
chr7 (76-174)||(48269615-48269711)
chr7 (76-166)||(47060861-47060950)
chr7 (76-174)||(48316302-48316399)
chr7 (79-164)||(36186524-36186608)
chr7 (75-133)||(19044227-19044285)
chr7 (75-133)||(20710351-20710409)
chr7 (75-173)||(37340235-37340332)
chr7 (74-135)||(41623895-41623956)
chr7 (79-217)||(10225842-10225980)
chr7 (76-147)||(21190656-21190727)
chr7 (76-163)||(34623433-34623519)
chr7 (76-135)||(46596830-46596889)
chr7 (76-133)||(41049270-41049327)
chr7 (76-216)||(30355239-30355378)
chr7 (73-163)||(47776263-47776352)
chr7 (79-135)||(28112779-28112835)
chr7 (76-144)||(47741714-47741782)
chr7 (86-133)||(42684245-42684292)
chr7 (75-185)||(27453625-27453734)
chr7 (76-158)||(40590549-40590630)
chr7 (76-134)||(41047712-41047770)
chr7 (73-141)||(42681925-42681993)
chr7 (76-163)||(29593381-29593467)
chr7 (75-121)||(35839323-35839369)
chr7 (75-121)||(39173195-39173241)
chr7 (76-121)||(30471633-30471678)
chr7 (75-107)||(26833578-26833610)
chr7 (106-161)||(36185800-36185853)
[»] chr1 (46 HSPs)
chr1 (75-217)||(6437538-6437679)
chr1 (79-185)||(19053996-19054101)
chr1 (75-185)||(46141715-46141824)
chr1 (75-185)||(49924789-49924898)
chr1 (79-185)||(41804064-41804169)
chr1 (79-185)||(46973141-46973246)
chr1 (74-170)||(18975166-18975261)
chr1 (79-185)||(36908515-36908620)
chr1 (79-184)||(13173773-13173876)
chr1 (76-213)||(23276111-23276247)
chr1 (76-163)||(13971998-13972083)
chr1 (79-183)||(35521551-35521654)
chr1 (73-185)||(49927544-49927655)
chr1 (76-135)||(1872042-1872101)
chr1 (79-217)||(26633467-26633601)
chr1 (79-141)||(14172051-14172113)
chr1 (87-185)||(35527044-35527141)
chr1 (76-185)||(11183120-11183228)
chr1 (79-147)||(42570079-42570147)
chr1 (75-162)||(37014883-37014969)
chr1 (76-185)||(27484993-27485101)
chr1 (79-216)||(38689869-38690004)
chr1 (79-164)||(51666690-51666774)
chr1 (76-216)||(8460097-8460235)
chr1 (79-147)||(29261352-29261419)
chr1 (80-166)||(36911720-36911803)
chr1 (74-121)||(9618654-9618701)
chr1 (74-125)||(35181329-35181380)
chr1 (75-121)||(640986-641032)
chr1 (79-145)||(1656155-1656220)
chr1 (79-141)||(6434690-6434752)
chr1 (79-216)||(13178132-13178266)
chr1 (75-132)||(8458918-8458975)
chr1 (76-121)||(22346107-22346152)
chr1 (74-126)||(7981219-7981271)
chr1 (75-163)||(9711704-9711791)
chr1 (79-131)||(36076641-36076693)
chr1 (176-218)||(6562410-6562452)
chr1 (79-133)||(7965978-7966032)
chr1 (75-121)||(27650084-27650130)
chr1 (79-133)||(36072307-36072361)
chr1 (79-147)||(19499180-19499246)
chr1 (76-185)||(23272783-23272891)
chr1 (76-121)||(49874942-49874987)
chr1 (75-135)||(26944412-26944472)
chr1 (73-157)||(46886446-46886529)
[»] chr8 (30 HSPs)
chr8 (76-217)||(18438568-18438708)
chr8 (76-172)||(18441485-18441580)
chr8 (79-185)||(7168025-7168130)
chr8 (76-185)||(35389442-35389550)
chr8 (75-185)||(41858152-41858261)
chr8 (80-185)||(41855306-41855410)
chr8 (71-163)||(45454335-45454426)
chr8 (76-135)||(39751008-39751067)
chr8 (76-135)||(43377332-43377391)
chr8 (74-163)||(3395824-3395912)
chr8 (99-216)||(18205743-18205859)
chr8 (76-140)||(40077325-40077389)
chr8 (76-147)||(5300681-5300752)
chr8 (76-163)||(34823069-34823155)
chr8 (78-185)||(38872961-38873067)
chr8 (76-163)||(39753050-39753136)
chr8 (74-163)||(5304197-5304285)
chr8 (76-147)||(43188007-43188078)
chr8 (84-134)||(38871741-38871791)
chr8 (76-121)||(2147050-2147095)
chr8 (88-147)||(28168667-28168724)
chr8 (77-161)||(39846986-39847069)
chr8 (76-163)||(1114677-1114763)
chr8 (75-134)||(43690114-43690173)
chr8 (76-163)||(44052279-44052365)
chr8 (73-147)||(3641577-3641651)
chr8 (75-121)||(34503152-34503198)
chr8 (76-161)||(34234517-34234601)
chr8 (79-115)||(51342-51378)
chr8 (79-127)||(4866372-4866420)
[»] chr6 (28 HSPs)
chr6 (73-163)||(18605976-18606065)
chr6 (77-185)||(13404663-13404770)
chr6 (79-185)||(13479663-13479768)
chr6 (76-161)||(29286163-29286247)
chr6 (79-133)||(32026042-32026096)
chr6 (98-174)||(12783999-12784074)
chr6 (76-163)||(2050963-2051049)
chr6 (72-133)||(7361121-7361182)
chr6 (74-197)||(13401418-13401540)
chr6 (98-173)||(23986024-23986098)
chr6 (76-115)||(25141179-25141218)
chr6 (87-161)||(34801482-34801555)
chr6 (79-216)||(23958827-23958963)
chr6 (79-132)||(26702742-26702795)
chr6 (75-163)||(2052636-2052722)
chr6 (76-188)||(29065674-29065785)
chr6 (76-188)||(29074687-29074798)
chr6 (76-188)||(29079451-29079562)
chr6 (76-188)||(29107260-29107371)
chr6 (73-185)||(35021294-35021405)
chr6 (76-163)||(29061230-29061316)
chr6 (79-185)||(32643552-32643657)
chr6 (103-187)||(7537159-7537242)
chr6 (77-163)||(6320542-6320627)
chr6 (79-125)||(18001151-18001197)
chr6 (85-147)||(26701795-26701857)
chr6 (75-216)||(31768686-31768826)
chr6 (91-135)||(18610285-18610329)
[»] scaffold0340 (1 HSPs)
scaffold0340 (75-163)||(1233-1320)
[»] scaffold0360 (1 HSPs)
scaffold0360 (74-174)||(7346-7446)
[»] scaffold0169 (1 HSPs)
scaffold0169 (76-135)||(1725-1784)
[»] scaffold0219 (2 HSPs)
scaffold0219 (76-185)||(20143-20252)
scaffold0219 (103-173)||(15664-15733)
[»] scaffold0618 (1 HSPs)
scaffold0618 (76-185)||(3820-3927)
[»] scaffold0192 (1 HSPs)
scaffold0192 (76-121)||(25886-25931)
[»] scaffold0188 (1 HSPs)
scaffold0188 (74-132)||(27375-27433)
[»] scaffold0794 (1 HSPs)
scaffold0794 (76-121)||(5218-5263)
[»] scaffold0184 (1 HSPs)
scaffold0184 (76-163)||(17965-18051)
[»] scaffold0126 (1 HSPs)
scaffold0126 (79-126)||(15926-15973)
[»] scaffold0116 (1 HSPs)
scaffold0116 (76-163)||(11235-11321)
[»] scaffold0078 (1 HSPs)
scaffold0078 (76-163)||(54793-54879)
[»] scaffold0341 (1 HSPs)
scaffold0341 (176-218)||(17600-17642)
[»] scaffold0147 (1 HSPs)
scaffold0147 (79-125)||(885-931)
[»] scaffold1379 (1 HSPs)
scaffold1379 (75-163)||(487-574)
[»] scaffold0494 (1 HSPs)
scaffold0494 (99-163)||(788-851)


Alignment Details
Target: chr2 (Bit Score: 78; Significance: 3e-36; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 76 - 185
Target Start/End: Original strand, 41181371 - 41181479
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcg 175  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||     
T  41181371 gagaattgatgttgacacattgcataaggctgaggcacacgagtaaaatacgtttttgccccctcggcag-ttaactgccgaggaattcaataaccggct 41181469  T
Q  176 acagttaact 185  Q
    ||| ||||||    
T  41181470 acatttaact 41181479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 79 - 185
Target Start/End: Original strand, 2917620 - 2917725
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgaca 178  Q
    |||||||||||||||||| |||||||||||||||||  ||||||||||||||||||| ||||| ||| |||||||||||| |||| || ||||||| |||    
T  2917620 aattgttgttgacacatttcataaggctgaggcacaaaagtaaaatacgtttttgccccctcggcag-ttaactgccgagaaattgaaaaaccggctaca 2917718  T
Q  179 gttaact 185  Q
    |||||||    
T  2917719 gttaact 2917725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 76 - 217
Target Start/End: Complemental strand, 35493480 - 35493340
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcg 175  Q
    ||||||||||||||||||||||||||||| |||| ||||| ||||||||||| ||||||| |||||  || |||||||||||||||||||| |||| ||     
T  35493480 gagaattgttgttgacacattgcataaggttgagacacacgagtaaaatacgcttttgccccctcggtag-ttaactgccgaggaattcaaaaaccagct 35493382  T
Q  176 acagttaactactacggaaaatctcgacagttaactgccgaa 217  Q
     ||||||||| |   ||||||| |||  ||||||||||||||    
T  35493381 gcagttaactgccgaggaaaatatcggtagttaactgccgaa 35493340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 16580478 - 16580550
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtt 147  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||    
T  16580478 tgagaattgttgttgacacattgcataaggctgagacacacgagtaaaatacatttttgcctcctcgacagtt 16580550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 87 - 185
Target Start/End: Original strand, 35490625 - 35490722
Alignment:
Q  87 ttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgacagttaact 185  Q
    ||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||| | ||||||||||| |||||||| |||||||  |||||||||    
T  35490625 ttgacacattgcataaggctgagacacacgagtaaaatacatttttgcctcctcgac-ggttaactgccgaagaattcaaaaaccggctgcagttaact 35490722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 79 - 185
Target Start/End: Original strand, 45475377 - 45475482
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgaca 178  Q
    ||||| |||||||||||| |||||||||||| ||||| ||||||||||| ||||||| ||||| ||| |||||||||||| ||||||| ||||||| |||    
T  45475377 aattgatgttgacacatttcataaggctgagacacacaagtaaaatacgattttgccccctcggcag-ttaactgccgagaaattcaaaaaccggctaca 45475475  T
Q  179 gttaact 185  Q
    |||||||    
T  45475476 gttaact 45475482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 75 - 183
Target Start/End: Original strand, 41497405 - 41497512
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggc 174  Q
    ||||||||| | ||||||||||||||||||||||||||||| |||||  |||||||||||| ||||||||  ||||||||||| |||||||| |||||||    
T  41497405 tgagaattgctcttgacacattgcataaggctgaggcacacgagtaatttacgtttttgccacctcgaca-cttaactgccgaagaattcaaaaaccggc 41497503  T
Q  175 gacagttaa 183  Q
      |||||||    
T  41497504 tgcagttaa 41497512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 74 - 216
Target Start/End: Complemental strand, 25184970 - 25184830
Alignment:
Q  74 atgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccgg 173  Q
    ||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||| ||||  ||| ||||||| |||||||||  | ||||||    
T  25184970 atgagaattgttgttgacagattgcataaggttgaggcacacgagtaaaatacgtttttgccccctcagcag-ttaactgtcgaggaatttga-aaccgg 25184873  T
Q  174 cgacagttaactactacggaaaatctcgacagttaactgccga 216  Q
    |  ||||||||| |   |||||| ||||  |||||||||||||    
T  25184872 ctgcagttaactgccgaggaaaacctcggtagttaactgccga 25184830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 147
Target Start/End: Complemental strand, 41053807 - 41053736
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtt 147  Q
    |||||||| |||||||||||| |||||||||||||||| | |||||  ||||||||||||||||||||||||    
T  41053807 gagaattgctgttgacacattacataaggctgaggcacgcgagtaatttacgtttttgcctcctcgacagtt 41053736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 76 - 174
Target Start/End: Complemental strand, 9660194 - 9660097
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggc 174  Q
    |||||||| |||||||||||||||||| ||||||| |||| |||||  ||| ||||||||  |||| ||| |||||||||||||||| |||||||||||    
T  9660194 gagaattgctgttgacacattgcataaagctgaggtacacgagtaatttacttttttgccctctcggcag-ttaactgccgaggaatacaataaccggc 9660097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 79 - 196
Target Start/End: Original strand, 19186684 - 19186800
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgaca 178  Q
    |||||||||||||||||  |||||||||||| ||||| |||||||||||||||| || | ||| ||| | |||||||||| ||||||| || ||||  ||    
T  19186684 aattgttgttgacacatatcataaggctgagacacacaagtaaaatacgtttttaccccatcggcag-taaactgccgagcaattcaaaaagcggctgca 19186782  T
Q  179 gttaactactacggaaaa 196  Q
    ||||||| ||| ||||||    
T  19186783 gttaactgctaaggaaaa 19186800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 76 - 185
Target Start/End: Complemental strand, 24607707 - 24607599
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcg 175  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||  ||||||||| || ||||  ||| ||||||||||| || || || |||||||     
T  24607707 gagaattgttgttgacacattgcataaggctgaggcacacaggtaatttacgttttttccccctcagcag-ttaactgccgaagatttaaaaaaccggct 24607609  T
Q  176 acagttaact 185  Q
     |||||||||    
T  24607608 gcagttaact 24607599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 79 - 166
Target Start/End: Complemental strand, 19187359 - 19187273
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaa 166  Q
    |||||||||| | ||||  |||||||||||| ||||| ||||||||||||||||||| ||||| ||| |||||||||||| |||||||    
T  19187359 aattgttgttcagacatatcataaggctgagacacacaagtaaaatacgtttttgccccctcggcag-ttaactgccgagaaattcaa 19187273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 216
Target Start/End: Complemental strand, 34921899 - 34921759
Alignment:
Q  74 atgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccgg 173  Q
    |||| ||||| | |||||||||| |||||||| |||  |||| ||||||||||||||||||| || ||  || |||||||||||| ||||||| ||||||    
T  34921899 atgaaaattgctattgacacatttcataaggcagagaaacacgagtaaaatacgtttttgcc-ccccggtag-ttaactgccgagaaattcaaaaaccgg 34921802  T
Q  174 cgacagttaactactacggaaaatctcgacagttaactgccga 216  Q
    |  ||||||||| ||  |||||| ||||  |||||||||||||    
T  34921801 ctgcagttaactgctgaggaaaacctcggtagttaactgccga 34921759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 77 - 163
Target Start/End: Original strand, 41004464 - 41004549
Alignment:
Q  77 agaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaatt 163  Q
    ||||| ||||||||||||||| |||||||||| ||| || |||||  ||||||||||| |||||| ||| |||||||||||||||||    
T  41004464 agaatcgttgttgacacattgtataaggctgatgcatacgagtaatttacgtttttgcttcctcggcag-ttaactgccgaggaatt 41004549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 76 - 161
Target Start/End: Original strand, 41052615 - 41052699
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaa 161  Q
    ||||||||||||||||| ||||||||||||||| |||||| |||||  |||||||||| | ||||| ||| |||| ||||||||||    
T  41052615 gagaattgttgttgacatattgcataaggctgatgcacacaagtaatttacgtttttgtcccctcggcag-ttaattgccgaggaa 41052699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 79 - 174
Target Start/End: Original strand, 28342460 - 28342554
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggc 174  Q
    |||||||||||||||||||||||||||| || ||||  |||||  |||||||||||| | ||| ||| ||||||| ||| |||||||| |||||||    
T  28342460 aattgttgttgacacattgcataaggctaagacacataagtaatttacgtttttgccccttcggcag-ttaactgtcgaagaattcaaaaaccggc 28342554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 166
Target Start/End: Complemental strand, 43950381 - 43950291
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaa 166  Q
    |||||| |||||||||||||||  |||||||||||  |||| |||||||||| |||||||| ||||| ||| |||||||| | |||||||||    
T  43950381 tgagaactgttgttgacacatttgataaggctgagaaacacgagtaaaatacatttttgccccctcggcag-ttaactgctgtggaattcaa 43950291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 79 - 185
Target Start/End: Complemental strand, 23409637 - 23409532
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgaca 178  Q
    ||||||||| ||||| || ||||||||||| |||||| |||||||||||  ||||||  |||| ||| |||| ||||||||||||||| ||| |||  ||    
T  23409637 aattgttgtggacacgttacataaggctgatgcacactagtaaaatacgcgtttgccctctcggcag-ttaattgccgaggaattcaaaaactggctgca 23409539  T
Q  179 gttaact 185  Q
    |||||||    
T  23409538 gttaact 23409532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 163
Target Start/End: Original strand, 435275 - 435363
Alignment:
Q  74 atgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaatt 163  Q
    |||| |||||||||||||||| || ||||| ||||||||||| |||||  |||||||||||| ||| | ||| ||||||||||| |||||    
T  435275 atgataattgttgttgacacactgtataagactgaggcacacgagtaatttacgtttttgcccccttggcag-ttaactgccgatgaatt 435363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 24512100 - 24512172
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtt 147  Q
    ||||||||| | |||||||||| |||| |||||||  |||| |||||||||||||||| || |||||||||||    
T  24512100 tgagaattgctcttgacacatttcatatggctgagaaacacaagtaaaatacgtttttaccccctcgacagtt 24512172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 41500374 - 41500302
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtt 147  Q
    ||||||||| |||||||||||| |||| |||||||  |||| ||||||||||| ||||||| ||||| |||||    
T  41500374 tgagaattgatgttgacacatttcatatggctgagaaacacgagtaaaatacgcttttgccccctcggcagtt 41500302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 147
Target Start/End: Original strand, 34918394 - 34918457
Alignment:
Q  84 ttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtt 147  Q
    ||||||| ||||  |||||||||||||||||| |||| |||||||||||||| ||||| |||||    
T  34918394 ttgttgatacatctcataaggctgaggcacacaagtacaatacgtttttgccccctcgtcagtt 34918457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 163
Target Start/End: Complemental strand, 41009066 - 41008980
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaatt 163  Q
    |||||||||  ||||||||||  ||||| | ||| ||||| |||||  |||||||||||||||||| ||| |||||||||||||||||    
T  41009066 gagaattgtcattgacacatttgataagaccgagacacacgagtaatttacgtttttgcctcctcggcag-ttaactgccgaggaatt 41008980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 147
Target Start/End: Complemental strand, 43493380 - 43493325
Alignment:
Q  92 acattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtt 147  Q
    ||||| |||||||||||| ||||| ||||||||||||||||||| ||||| |||||    
T  43493380 acattacataaggctgagacacacaagtaaaatacgtttttgccccctcggcagtt 43493325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 170
Target Start/End: Original strand, 2648051 - 2648144
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataac 170  Q
    ||||| ||||||||| ||||| ||||||| ||||  |||| |||||||||||||||| ||  |||||||| |||  || ||||||||||||||||    
T  2648051 gagaaatgttgttgagacatttcataaggttgagaaacacgagtaaaatacgttttttccgtctcgacag-ttacttgtcgaggaattcaataac 2648144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 80 - 133
Target Start/End: Complemental strand, 82396 - 82343
Alignment:
Q  80 attgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttg 133  Q
    ||||||||||||||||||||||||| |  | ||||| |||||||||||||||||    
T  82396 attgttgttgacacattgcataaggttatgtcacacgagtaaaatacgtttttg 82343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 74 - 163
Target Start/End: Original strand, 1096527 - 1096615
Alignment:
Q  74 atgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaatt 163  Q
    ||||| |||||||||  ||||||  |||||| || ||||||| ||||||||||| ||||||| ||||| | | |||||||||||||||||    
T  1096527 atgagtattgttgtttccacatttgataaggttgtggcacactagtaaaatacgattttgccccctcggctg-ttaactgccgaggaatt 1096615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 121
Target Start/End: Complemental strand, 41183350 - 41183305
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaa 121  Q
    |||||||| ||||||||||||| ||||||||||||||||| |||||    
T  41183350 gagaattgctgttgacacattgtataaggctgaggcacacgagtaa 41183305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 157
Target Start/End: Complemental strand, 29093971 - 29093892
Alignment:
Q  77 agaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccga 157  Q
    ||||||||||||  |||||| |||||||||| ||||||| |||||  |||  ||||||| ||||||||| |||||||||||    
T  29093971 agaattgttgttcccacattacataaggctgtggcacacgagtaatttactcttttgccccctcgacag-ttaactgccga 29093892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 185
Target Start/End: Original strand, 43943627 - 43943731
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcg 175  Q
    ||||||||||||||||||||||||    ||||| |||||| | ||||||||| |||| || ||||  ||| ||||||  ||||||||| ||||||||||     
T  43943627 gagaattgttgttgacacattgca----gctgaagcacacaaataaaatacgatttttccccctcagcag-ttaactctcgaggaatttaataaccggct 43943721  T
Q  176 acagttaact 185  Q
     |||||||||    
T  43943722 gcagttaact 43943731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 163
Target Start/End: Original strand, 1149406 - 1149492
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaatt 163  Q
    |||||||||||||  ||||||  |||||| || | ||||| ||||||||||| ||||||  ||||| ||| |||||||||||||||||    
T  1149406 gagaattgttgttcccacatttgataaggttgtgccacactagtaaaatacgattttgctccctcggcag-ttaactgccgaggaatt 1149492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 147
Target Start/End: Original strand, 25964738 - 25964809
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtt 147  Q
    |||||||||||||  ||||||  |||||||||||  |||| ||||||||||| ||||||| ||||| |||||    
T  25964738 gagaattgttgttcccacatttgataaggctgagaaacacgagtaaaatacgattttgccccctcggcagtt 25964809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 104
Target Start/End: Complemental strand, 15488282 - 15488253
Alignment:
Q  75 tgagaattgttgttgacacattgcataagg 104  Q
    ||||||||||||||||||||||||||||||    
T  15488282 tgagaattgttgttgacacattgcataagg 15488253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 185
Target Start/End: Original strand, 12905492 - 12905591
Alignment:
Q  85 tgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgacagttaac 184  Q
    |||||||||||| ||||||||||||  |||  ||||||||||| ||||  | ||||| ||| |||||||||||| |||| || || ||||  ||||||||    
T  12905492 tgttgacacatttcataaggctgagaaacaagagtaaaatacgcttttttcccctcggcag-ttaactgccgagaaattgaaaaatcggctgcagttaac 12905590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 127
Target Start/End: Complemental strand, 14181949 - 14181901
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacg 127  Q
    ||||| |||||||| ||| ||||||||| |||||||| |||||||||||    
T  14181949 aattgctgttgacatattacataaggctcaggcacacaagtaaaatacg 14181901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 183
Target Start/End: Original strand, 23786081 - 23786164
Alignment:
Q  99 ataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgacagttaa 183  Q
    |||||||||||  |||  ||||||||| | ||||| | ||||| ||||| ||||||||||||||| || | ||||||||||||||    
T  23786081 ataaggctgagaaacattagtaaaatatgattttgtcccctcggcagtt-aactgccgaggaattaaaaatccggcgacagttaa 23786164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 101
Target Start/End: Original strand, 38340779 - 38340807
Alignment:
Q  73 aatgagaattgttgttgacacattgcata 101  Q
    |||||||||||||||||||||||||||||    
T  38340779 aatgagaattgttgttgacacattgcata 38340807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 163
Target Start/End: Complemental strand, 45479930 - 45479847
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaatt 163  Q
    |||||||||||||||||| ||||||||| ||  |||  ||||||||||| ||||||   |||| ||| |||||||||||| ||||    
T  45479930 aattgttgttgacacatttcataaggctcagaaacatgagtaaaatacgattttgctctctcggcag-ttaactgccgagaaatt 45479847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 2e-34; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 75 - 217
Target Start/End: Complemental strand, 3603288 - 3603147
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggc 174  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||  ||||||||| ||||||||||| |||||||||||| |||    
T  3603288 tgagaattgttgttgacacattgcataaggctgaggcacataagtaaaatacgtttttgctccctcgacag-ttaactgccgaagaattcaataactggc 3603190  T
Q  175 gacagttaactactacggaaaatctcgacagttaactgccgaa 217  Q
      ||||||||| |   |||||| ||||  ||||||||||||||    
T  3603189 tgcagttaacttccgaggaaaacctcggtagttaactgccgaa 3603147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 71 - 185
Target Start/End: Complemental strand, 18310165 - 18310052
Alignment:
Q  71 ttaatgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataac 170  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||| ||||||| ||||||||||||||||    
T  18310165 ttaaagagaattgttgttgacacattgcataaggctgaggcacacaagtaaaatacgtttttgcctcctcagcag-ttaactgtcgaggaattcaataac 18310067  T
Q  171 cggcgacagttaact 185  Q
    || |  |||||||||    
T  18310066 cgactgcagttaact 18310052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 75 - 185
Target Start/End: Original strand, 20192286 - 20192395
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggc 174  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| | ||| ||| |||||||| || ||||||||||| ||||    
T  20192286 tgagaattgttgttgacacatttcataaggctgaggcacacaagtaaaatacgattttgccccttcgtcag-ttaactgctgaagaattcaataatcggc 20192384  T
Q  175 gacagttaact 185  Q
      |||||||||    
T  20192385 tgcagttaact 20192395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 76 - 171
Target Start/End: Complemental strand, 20200287 - 20200193
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataacc 171  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| | ||| ||| ||||||| | || ||||||||||||    
T  20200287 gagaattgttgttgacacattgcataaggctgaggcacacaaataaaatacgtttttgccccatcggcag-ttaactgtcaagaaattcaataacc 20200193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 79 - 185
Target Start/End: Complemental strand, 18538471 - 18538366
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgaca 178  Q
    |||||||||||||||||| ||| |||||||||||||| ||||||||||| ||||||| ||||| ||| |||| || |||||||||||| |||||||  ||    
T  18538471 aattgttgttgacacatttcattaggctgaggcacacaagtaaaatacgattttgccccctcggcag-ttaattgtcgaggaattcaaaaaccggctgca 18538373  T
Q  179 gttaact 185  Q
    |||||||    
T  18538372 gttaact 18538366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 79 - 185
Target Start/End: Original strand, 34682194 - 34682299
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgaca 178  Q
    |||||||||||||||||| |||||||||||||  ||| ||||||||||| ||||||  ||| ||||| ||||||| |||||||||||| |||||||  ||    
T  34682194 aattgttgttgacacatttcataaggctgaggttcacaagtaaaatacgcttttgctcccttgacag-ttaactgtcgaggaattcaaaaaccggctgca 34682292  T
Q  179 gttaact 185  Q
    |||||||    
T  34682293 gttaact 34682299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 1398541 - 1398634
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccgg 173  Q
    |||||||||||||||||| ||||||| |||| ||||  ||||||||||  ||||||  | ||||||| |||||||||||||||||||||||||||    
T  1398541 aattgttgttgacacattacataaggttgagacacagaagtaaaatacacttttgctccttcgacag-ttaactgccgaggaattcaataaccgg 1398634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 76 - 174
Target Start/End: Original strand, 7796595 - 7796692
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggc 174  Q
    |||||||| |||||||||||||||| |||||||||||||| |||||  |||||||||||| ||| | ||| ||| |||||||| ||||||| |||||||    
T  7796595 gagaattgatgttgacacattgcattaggctgaggcacacgagtaatttacgtttttgcccccttggcag-ttatctgccgagtaattcaaaaaccggc 7796692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 75 - 185
Target Start/End: Original strand, 41201661 - 41201770
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggc 174  Q
    |||||||||  || |||||||| |||||||||||||||||| ||||||||||| ||||| |  |||||||  |||| || ||||||||||||||||||||    
T  41201661 tgagaattgccgtcgacacattacataaggctgaggcacacgagtaaaatacgattttgtcctctcgaca-attaattgtcgaggaattcaataaccggc 41201759  T
Q  175 gacagttaact 185  Q
      |||||||||    
T  41201760 tgcagttaact 41201770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 76 - 216
Target Start/End: Original strand, 3600270 - 3600410
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaatt-caataaccggc 174  Q
    ||||||||||||||||||||| ||||| | |||| ||||| ||||||||| ||||||||| ||||| ||| |||||||||||  ||||  ||||||| ||    
T  3600270 gagaattgttgttgacacatttcataaagttgagccacacaagtaaaatatgtttttgccccctcggcag-ttaactgccgaataattataataaccagc 3600368  T
Q  175 gacagttaactactacggaaaatctcgacagttaactgccga 216  Q
      ||||||||| | | |||||| ||||| ||||||| |||||    
T  3600369 tgcagttaactgccaaggaaaacctcgatagttaacagccga 3600410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 132
Target Start/End: Original strand, 25877554 - 25877612
Alignment:
Q  74 atgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgttttt 132  Q
    ||||||||||||||||||||||||||||||| || | ||||| ||||||||||||||||    
T  25877554 atgagaattgttgttgacacattgcataaggttgtgtcacacgagtaaaatacgttttt 25877612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 25500025 - 25499930
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggc--acaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccgg 173  Q
    ||||| |||||||||||| ||||||||||||||  |||| ||||||||||| ||||||| ||||| ||| ||||||  |||||||||||| ||||||    
T  25500025 aattggtgttgacacattacataaggctgaggcgaacacaagtaaaatacgcttttgccccctcggcag-ttaactatcgaggaattcaaaaaccgg 25499930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 173
Target Start/End: Complemental strand, 19228788 - 19228689
Alignment:
Q  73 aatgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccg 172  Q
    ||||| ||||||||||||||||||  ||||||||||| ||||| ||||||||||||   |||| ||||| ||| ||||||||||| ||||| || |||||    
T  19228788 aatgaaaattgttgttgacacatttgataaggctgagacacacaagtaaaatacgtaaatgccccctcggcag-ttaactgccgatgaattaaaaaaccg 19228690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 42937126 - 42937182
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgttttt 132  Q
    |||| ||||||||  ||||||||||||||||||||||||| ||||||||||||||||    
T  42937126 gagagttgttgtttccacattgcataaggctgaggcacacaagtaaaatacgttttt 42937182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 163
Target Start/End: Complemental strand, 512875 - 512793
Alignment:
Q  80 attgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaatt 163  Q
    |||||||||||||||||  |||||| |||   |||| |||||| |||||||||||||||||||||| ||||||||||| |||||    
T  512875 attgttgttgacacatttgataaggttgataaacacaagtaaagtacgtttttgcctcctcgacag-ttaactgccgatgaatt 512793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 163
Target Start/End: Complemental strand, 39743287 - 39743201
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaatt 163  Q
    |||||||||||||  ||||||  ||||||||| | ||||| ||||||||| | ||||||| ||||||||| |||||||||||||||||    
T  39743287 gagaattgttgttcccacatttgataaggctgtgccacactagtaaaatatgattttgccccctcgacag-ttaactgccgaggaatt 39743201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 213
Target Start/End: Complemental strand, 17967025 - 17966889
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcg 175  Q
    |||||||||||||  ||||||  |||||||||||  |||| ||||||||||| |||| || ||||| ||| |||||||||||| |||| || | ||| |     
T  17967025 gagaattgttgttcccacatttgataaggctgagaaacactagtaaaatacgattttaccccctcggcag-ttaactgccgagaaattaaaaatccgact 17966927  T
Q  176 acagttaactactacggaaaatctcgacagttaactgc 213  Q
     |||||||||||   |||||||||||  ||||||||||    
T  17966926 gcagttaactaccgaggaaaatctcggtagttaactgc 17966889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 141
Target Start/End: Original strand, 31094497 - 31094562
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcg 141  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||||  ||| |||||||| |||||    
T  31094497 gagaattgttgttgatacattgcataaggcttaggcacacgagtaatttacatttttgccccctcg 31094562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 26366822 - 26366870
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaat 124  Q
    ||||||||||||||| |||||||||||||||||| ||||| ||||||||    
T  26366822 gagaattgttgttgatacattgcataaggctgagacacacgagtaaaat 26366870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 72 - 216
Target Start/End: Complemental strand, 34124078 - 34123935
Alignment:
Q  72 taatgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataacc 171  Q
    |||| ||||||||||||  ||||||  |||||| || | ||||||||||||||||| ||||||| ||||| ||| ||||||| |||| ||||  | | ||    
T  34124078 taatcagaattgttgttcccacatttaataaggttgtgccacaccagtaaaatacgattttgccccctcggcag-ttaactgtcgagaaatttgaaatcc 34123980  T
Q  172 ggcgacagttaactactacggaaaatctcgacagttaactgccga 216  Q
    |||  ||||||||| | | |||||| ||||  |||||||||||||    
T  34123979 ggctgcagttaactgccaaggaaaacctcggtagttaactgccga 34123935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 159
Target Start/End: Original strand, 42537135 - 42537217
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgagg 159  Q
    ||||||||||||| |||||||  |||||||||||  |||| |||||||||| |||||||| | ||| ||| |||||||||||||    
T  42537135 gagaattgttgttcacacatttgataaggctgagaaacacgagtaaaatacatttttgccccatcggcag-ttaactgccgagg 42537217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 132
Target Start/End: Complemental strand, 1401478 - 1401428
Alignment:
Q  82 tgttgttgacacattgcataaggctgaggcacaccagtaaaatacgttttt 132  Q
    ||||||||||||||| |||||||||||| ||||| ||||||||||| ||||    
T  1401478 tgttgttgacacatttcataaggctgagacacacaagtaaaatacgctttt 1401428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 121
Target Start/End: Complemental strand, 8680382 - 8680336
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaa 121  Q
    ||||||||||||||||||||||||||||||||| | ||||| |||||    
T  8680382 tgagaattgttgttgacacattgcataaggctgtgtcacacgagtaa 8680336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 165
Target Start/End: Original strand, 30612895 - 30612987
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagt---ttaactgccgaggaattca 165  Q
    ||||||||||||| |||||||  ||||||| |||  |||| ||||||||||||||||||| ||| | ||||   |||||||||||| ||||||    
T  30612895 gagaattgttgttcacacatttgataaggccgagaaacacgagtaaaatacgtttttgcccccttggcagtcagttaactgccgagcaattca 30612987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 74 - 163
Target Start/End: Complemental strand, 27867961 - 27867873
Alignment:
Q  74 atgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaatt 163  Q
    |||||||||||||||  |||||   ||||||||| | ||||| ||||||||||| |||| || ||||| ||| |||||||||||||||||    
T  27867961 atgagaattgttgttcccacatgtgataaggctgtgccacactagtaaaatacgattttaccccctcggcag-ttaactgccgaggaatt 27867873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 165
Target Start/End: Original strand, 30611173 - 30611261
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattca 165  Q
    ||||||||||||| |||||||  |||||||||||  |||| |||||||| |||||||||| ||| | ||| |||||| ||||| ||||||    
T  30611173 gagaattgttgttcacacatttgataaggctgagaaacacgagtaaaattcgtttttgcccccttggcag-ttaactaccgagcaattca 30611261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 81 - 166
Target Start/End: Complemental strand, 33995282 - 33995198
Alignment:
Q  81 ttgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaa 166  Q
    |||||||||||| |||  |||||| |||||||||| ||||||||||  ||||  | ||||||||| |||||||||||| |||||||    
T  33995282 ttgttgttgacatattttataaggttgaggcacacaagtaaaatacaattttatcccctcgacag-ttaactgccgagaaattcaa 33995198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 134
Target Start/End: Complemental strand, 35567156 - 35567108
Alignment:
Q  86 gttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgc 134  Q
    ||||||||||| ||| |||||||||||||| ||||||||| ||||||||    
T  35567156 gttgacacatttcatcaggctgaggcacacaagtaaaatatgtttttgc 35567108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 87 - 174
Target Start/End: Original strand, 33993225 - 33993311
Alignment:
Q  87 ttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggc 174  Q
    |||||||||| ||||||| ||||  | || ||||||||||||||||||| |||||  || |||||||||||  ||||||| |||||||    
T  33993225 ttgacacatttcataaggttgagaaatacgagtaaaatacgtttttgccccctcggaag-ttaactgccgaaaaattcaaaaaccggc 33993311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 163
Target Start/End: Complemental strand, 41799909 - 41799820
Alignment:
Q  73 aatgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaatt 163  Q
    ||||||||||||||||  ||||||  ||||| ||| | ||||| |||||  ||| |||||||| ||||||||| |||||||| ||||||||    
T  41799909 aatgagaattgttgttcccacatttgataagactgtgacacacgagtaatttacttttttgccccctcgacag-ttaactgctgaggaatt 41799820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 8702307 - 8702251
Alignment:
Q  106 tgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaatt 163  Q
    ||||| |||| ||||||||||| ||||||  ||||||||| |||||||||||||||||    
T  8702307 tgaggtacacaagtaaaatacgattttgctccctcgacag-ttaactgccgaggaatt 8702251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 28387238 - 28387289
Alignment:
Q  111 cacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaatt 163  Q
    ||||| ||||||||||| |||| || ||||||||| |||||||||||||||||    
T  28387238 cacactagtaaaatacgattttaccccctcgacag-ttaactgccgaggaatt 28387289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 1e-32; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 74 - 185
Target Start/End: Complemental strand, 7248001 - 7247891
Alignment:
Q  74 atgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccgg 173  Q
    |||||||||||||||||||||||| ||||||||||||||||| | ||||||||| ||||||| ||||| ||| |||||||||||||||||||||||||||    
T  7248001 atgagaattgttgttgacacattggataaggctgaggcacacgaataaaatacgcttttgccccctcggcag-ttaactgccgaggaattcaataaccgg 7247903  T
Q  174 cgacagttaact 185  Q
    |  |||||||||    
T  7247902 ctgcagttaact 7247891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 75 - 185
Target Start/End: Complemental strand, 2433083 - 2432974
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggc 174  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||  | ||||| ||| ||||||| |||||||||||||||||||     
T  2433083 tgagaattgttgttgacacattgcataaggctgaggcacacgagtaaaatacgcttttatcccctcggcag-ttaactgtcgaggaattcaataaccgga 2432985  T
Q  175 gacagttaact 185  Q
     ||||||||||    
T  2432984 tacagttaact 2432974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 217
Target Start/End: Complemental strand, 41579864 - 41579723
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggc 174  Q
    ||||||||||||||||||| ||||||||||||||||||||  ||||||||||| |||| || ||||| ||| |||| ||| |||||||||||||||||||    
T  41579864 tgagaattgttgttgacacgttgcataaggctgaggcacataagtaaaatacgatttttccccctcggcag-ttaattgctgaggaattcaataaccggc 41579766  T
Q  175 gacagttaactactacggaaaatctcgacagttaactgccgaa 217  Q
      ||||||||| |   |||||| ||||  ||||||||||||||    
T  41579765 tgcagttaactgccgaggaaaacctcggtagttaactgccgaa 41579723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 73 - 216
Target Start/End: Complemental strand, 52570707 - 52570566
Alignment:
Q  73 aatgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccg 172  Q
    ||||| |||||| |||||||||||||||||||||||||||||| | |||||||||||||| || ||||| ||| ||||||||||| |||||||| |||||    
T  52570707 aatgataattgtcgttgacacattgcataaggctgaggcacacgattaaaatacgttttttcc-cctcggcag-ttaactgccgaagaattcaaaaaccg 52570610  T
Q  173 gcgacagttaactactacggaaaatctcgacagttaactgccga 216  Q
     |  |||||||||||   | |||| ||||  |||||||||||||    
T  52570609 actgcagttaactaccgagaaaaacctcggtagttaactgccga 52570566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 76 - 183
Target Start/End: Original strand, 55267375 - 55267481
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcg 175  Q
    |||||||||||||||||| ||||||||||||||| ||||| |||||  |||||||||||| ||||||||| ||||||||||| |||||||| || ||||     
T  55267375 gagaattgttgttgacacgttgcataaggctgagacacacgagtaatttacgtttttgccccctcgacag-ttaactgccgaagaattcaaaaatcggct 55267473  T
Q  176 acagttaa 183  Q
     |||||||    
T  55267474 gcagttaa 55267481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 76 - 187
Target Start/End: Original strand, 7837526 - 7837639
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgcc--gaggaattcaataaccgg 173  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||  || |||||| || ||||||||||| |||||||  ||||| ||||| ||||||    
T  7837526 gagaattgttgttgacacattgcataaggctgagacacacaagtaatttaagttttttccccctcgacagttaaactgccgagaggatttcaaaaaccgg 7837625  T
Q  174 cgacagttaactac 187  Q
    |  |||||||||||    
T  7837626 ctgcagttaactac 7837639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 52567693 - 52567786
Alignment:
Q  72 taatgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaa 166  Q
    ||||||||||||||||||| || ||||||||||||||||||||| ||||||||||| |||||||| |||| ||| |||||||||||  |||||||    
T  52567693 taatgagaattgttgttgatacgttgcataaggctgaggcacacgagtaaaatacgattttgccttctcggcag-ttaactgccgaataattcaa 52567786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 79 - 216
Target Start/End: Original strand, 29929363 - 29929499
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgaca 178  Q
    ||||||||||||||||||  ||||||||||||||||| ||||||||| | ||||||  ||||||||| |||||||  ||||||||||| |||||||  ||    
T  29929363 aattgttgttgacacattttataaggctgaggcacacaagtaaaatatgattttgctccctcgacag-ttaactgttgaggaattcaaaaaccggctgca 29929461  T
Q  179 gttaactactacggaaaatctcgacagttaactgccga 216  Q
     |||||| |   |||||| ||||| |||||||||||||    
T  29929462 attaactgccgaggaaaacctcgatagttaactgccga 29929499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 79 - 216
Target Start/End: Original strand, 29978517 - 29978653
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgaca 178  Q
    ||||||||||||||||||  ||||||||||||||||| ||||||||| | ||||||  ||||||||| |||||||  ||||||||||| |||||||  ||    
T  29978517 aattgttgttgacacattttataaggctgaggcacacaagtaaaatatgattttgctccctcgacag-ttaactgttgaggaattcaaaaaccggctgca 29978615  T
Q  179 gttaactactacggaaaatctcgacagttaactgccga 216  Q
     |||||| |   |||||| ||||| |||||||||||||    
T  29978616 attaactgccgaggaaaacctcgatagttaactgccga 29978653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 79 - 217
Target Start/End: Original strand, 19440193 - 19440330
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgaca 178  Q
    ||||| |||||| ||||||||||| |||||||||||| |||||||||   ||||||||||||| ||| ||||||||||| |||||||  |||||||  ||    
T  19440193 aattgctgttgatacattgcataaagctgaggcacacgagtaaaataaacttttgcctcctcggcag-ttaactgccgaagaattcataaaccggctgca 19440291  T
Q  179 gttaactactacggaaaatctcgacagttaactgccgaa 217  Q
    ||||||| |   |||||| ||||  ||||||||||||||    
T  19440292 gttaactgccgaggaaaacctcggtagttaactgccgaa 19440330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 82 - 187
Target Start/End: Original strand, 66841 - 66944
Alignment:
Q  82 tgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgacagtt 181  Q
    |||||||||||||||  ||||||||||| ||||| ||||||||||| ||||||| ||||| ||| ||||||||||||| |||||| |||||||  |||||    
T  66841 tgttgttgacacatttgataaggctgagacacacgagtaaaatacgcttttgccccctcggcag-ttaactgccgaggtattcaa-aaccggctgcagtt 66938  T
Q  182 aactac 187  Q
    ||||||    
T  66939 aactac 66944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 147
Target Start/End: Complemental strand, 41805814 - 41805743
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtt 147  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||  ||||||||||| |||||| |||||    
T  41805814 gagaattgttgatgacacattgcataaggctgaggcacacaagtaatttacgtttttgcttcctcggcagtt 41805743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 76 - 166
Target Start/End: Complemental strand, 19454464 - 19454375
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaa 166  Q
    ||||||||||||||| ||||||||||||| |||| ||||| ||||||||||| |||||||  |||| ||| |||||||| |||||||||||    
T  19454464 gagaattgttgttgatacattgcataaggttgagacacacgagtaaaatacgcttttgccctctcggcag-ttaactgctgaggaattcaa 19454375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 79 - 217
Target Start/End: Complemental strand, 43571821 - 43571684
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgaca 178  Q
    |||||||||||||||||| ||||||| | ||| |||| ||||||||| ||||||||| ||||| ||| |||||||| ||||||||||| |  ||||  ||    
T  43571821 aattgttgttgacacattacataaggttcaggtacacaagtaaaatatgtttttgccccctcggcag-ttaactgctgaggaattcaaaagtcggctgca 43571723  T
Q  179 gttaactactacggaaaatctcgacagttaactgccgaa 217  Q
    ||||||| | |  |||||||| || ||| ||||||||||    
T  43571722 gttaactgccaatgaaaatcttgatagtaaactgccgaa 43571684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 76 - 185
Target Start/End: Original strand, 46344871 - 46344979
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcg 175  Q
    |||||||| |||||||| |||| |||||| |||||||||| |||||||||  |||||||| ||||| ||||| ||||| |||||||||||| || ||||     
T  46344871 gagaattgatgttgacaaattggataaggttgaggcacacaagtaaaatatttttttgccccctcggcagtt-aactgtcgaggaattcaaaaatcggct 46344969  T
Q  176 acagttaact 185  Q
     |||||||||    
T  46344970 gcagttaact 46344979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 6489266 - 6489338
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtt 147  Q
    ||||||||| |||||||||||||||||||| |||||||||| |||||  |||||||||||| ||||| |||||    
T  6489266 tgagaattgctgttgacacattgcataaggttgaggcacacaagtaatttacgtttttgccccctcggcagtt 6489338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 185
Target Start/End: Complemental strand, 28611236 - 28611131
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgaca 178  Q
    ||||||| || ||||||| |||||||||||| ||||| |||||||||   ||||||| ||||| ||| |||||||||||| ||||||| |||||||  ||    
T  28611236 aattgttctttacacatttcataaggctgagacacacaagtaaaatataattttgccccctcggcag-ttaactgccgagaaattcaaaaaccggctgca 28611138  T
Q  179 gttaact 185  Q
    |||||||    
T  28611137 gttaact 28611131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 213
Target Start/End: Complemental strand, 30256139 - 30256006
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgaca 178  Q
    |||||||||||||||||| ||||| |||||||||||| |||||||||| |   |||| ||| |  || ||||||||||||||||| || |||||||  ||    
T  30256139 aattgttgttgacacatttcataaagctgaggcacacaagtaaaatacataaatgcccccttggtag-ttaactgccgaggaattaaaaaaccggctgca 30256041  T
Q  179 gttaactactacggaaaatctcgacagttaactgc 213  Q
    ||||||| |   |||||| ||||| ||||||||||    
T  30256040 gttaactgccgaggaaaacctcgatagttaactgc 30256006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 85 - 163
Target Start/End: Original strand, 42804398 - 42804475
Alignment:
Q  85 tgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaatt 163  Q
    |||||||||||| |||||||||||||||||| ||||||||||  ||| ||| |||||| || |||||||||||||||||    
T  42804398 tgttgacacatttcataaggctgaggcacacaagtaaaatacactttagccccctcgatag-ttaactgccgaggaatt 42804475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 161
Target Start/End: Complemental strand, 42807736 - 42807655
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaa 161  Q
    |||||||||| ||||||| ||||||||||| |||||| | |||||||| |||||||||||||| ||| ||||||| |||||||    
T  42807736 aattgttgttaacacatttcataaggctgatgcacacaaataaaatacatttttgcctcctcggcag-ttaactgtcgaggaa 42807655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 79 - 216
Target Start/End: Complemental strand, 29918477 - 29918341
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgaca 178  Q
    |||||||||||||| ||| |||||||||||||||||  ||||||||||| ||||| | ||||| ||  |||||||||||  ||||| | |||||||  ||    
T  29918477 aattgttgttgacatatttcataaggctgaggcacataagtaaaatacgattttggcccctcggca-attaactgccgaataattcgaaaaccggctgca 29918379  T
Q  179 gttaactactacggaaaatctcgacagttaactgccga 216  Q
    ||||||| |   |||||| ||||  |||||||||||||    
T  29918378 gttaactgccgaggaaaacctcgttagttaactgccga 29918341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 79 - 216
Target Start/End: Complemental strand, 29967630 - 29967494
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgaca 178  Q
    |||||||||||||| ||| |||||||||||||||||  ||||||||||| ||||| | ||||| ||  |||||||||||  ||||| | |||||||  ||    
T  29967630 aattgttgttgacatatttcataaggctgaggcacataagtaaaatacgattttggcccctcggca-attaactgccgaataattcgaaaaccggctgca 29967532  T
Q  179 gttaactactacggaaaatctcgacagttaactgccga 216  Q
    ||||||| |   |||||| ||||  |||||||||||||    
T  29967531 gttaactgccgaggaaaacctcgttagttaactgccga 29967494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 163
Target Start/End: Original strand, 11380375 - 11380461
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaatt 163  Q
    |||||||||||||||||||||   | ||||||||  |||| ||||||||||||||||||| | ||| ||| |||||||||||||||||    
T  11380375 gagaattgttgttgacacatttggttaggctgagaaacacgagtaaaatacgtttttgccccttcggcag-ttaactgccgaggaatt 11380461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 147
Target Start/End: Original strand, 41577009 - 41577080
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtt 147  Q
    ||||||||||||||||||||| ||||||||||||  | || | ||||||||||||||||||  |||||||||    
T  41577009 gagaattgttgttgacacatttcataaggctgagaaatacaaataaaatacgtttttgccttttcgacagtt 41577080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 73 - 163
Target Start/End: Complemental strand, 23443248 - 23443159
Alignment:
Q  73 aatgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaatt 163  Q
    ||||||||||||||||  ||||||  ||||||||| | ||||| ||||||||||| |||| || ||||| ||| |||||||||||||||||    
T  23443248 aatgagaattgttgttcccacatttgataaggctgtgacacactagtaaaatacgattttaccccctcggcag-ttaactgccgaggaatt 23443159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 79 - 185
Target Start/End: Complemental strand, 45101984 - 45101879
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgaca 178  Q
    ||||||||| |||||||| ||||||| |||||||||  ||||||||||||||||  | ||||| ||| |||| ||  ||||||||||| |||||||  ||    
T  45101984 aattgttgtcgacacatttcataaggttgaggcacataagtaaaatacgtttttatcccctcggcag-ttaattgttgaggaattcaaaaaccggctgca 45101886  T
Q  179 gttaact 185  Q
    |||||||    
T  45101885 gttaact 45101879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 51402539 - 51402473
Alignment:
Q  74 atgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctc 140  Q
    |||||||||| |||||||||||| |||| |||||||  |||| |||||||||||||||||| |||||    
T  51402539 atgagaattgatgttgacacatttcatatggctgagaaacacgagtaaaatacgtttttgcttcctc 51402473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 216
Target Start/End: Original strand, 41802939 - 41803071
Alignment:
Q  83 gttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgacagtta 182  Q
    ||||| |||||||| |||| |||||||  | || |||||||||||||||||||  |||| ||| ||||||||||| ||||| || |||||||  ||||||    
T  41802939 gttgtcgacacatttcatatggctgagaaatacgagtaaaatacgtttttgcccactcggcag-ttaactgccgaagaatttaaaaaccggctgcagtta 41803037  T
Q  183 actactacggaaaatctcgacagttaactgccga 216  Q
    ||| |   |||||| ||||  |||||||||||||    
T  41803038 actgccgaggaaaacctcggtagttaactgccga 41803071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 173
Target Start/End: Complemental strand, 55207802 - 55207706
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccgg 173  Q
    |||||||| |||||||||||| |||| |||||||  |||| ||||||||||  ||||||| | ||| ||| ||||||||||| |||||||| ||||||    
T  55207802 gagaattgatgttgacacatttcatatggctgagaaacacgagtaaaatactcttttgccccatcggcag-ttaactgccgaagaattcaaaaaccgg 55207706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 87 - 218
Target Start/End: Complemental strand, 13897004 - 13896874
Alignment:
Q  87 ttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgacagttaacta 186  Q
    |||| ||||||||||||||| || ||||| ||||||||| ||||||| ||||||| ||| |||| ||| || ||||| |||||| |||  |||||||||     
T  13897004 ttgatacattgcataaggctaagacacacgagtaaaatatgtttttgactcctcggcag-ttaattgctgaagaatttaataactggctgcagttaactg 13896906  T
Q  187 ctacggaaaatctcgacagttaactgccgaag 218  Q
        |||||| ||||  |||||||||||||||    
T  13896905 tcgaggaaaacctcggtagttaactgccgaag 13896874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 147
Target Start/End: Original strand, 55205271 - 55205342
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtt 147  Q
    |||||||| |||||||||||||||||||||||||||| |  |||||  |||||||||| | ||||| |||||    
T  55205271 gagaattgatgttgacacattgcataaggctgaggcatatgagtaatttacgtttttgtcccctcggcagtt 55205342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 157
Target Start/End: Complemental strand, 600684 - 600603
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccga 157  Q
    ||||||||||||||  ||||||| | ||||||| ||||||| ||||||  ||||||||||  ||||||||| |||||||||||    
T  600684 tgagaattgttgttcccacattgtagaaggctgcggcacacgagtaaatgacgtttttgcgccctcgacag-ttaactgccga 600603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 141
Target Start/End: Original strand, 44490341 - 44490404
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcg 141  Q
    ||||||||||||||||| | |  ||||||||||| ||||| | |||||||||||||||||||||||    
T  44490341 gagaattgttgttgacataat--ataaggctgagacacacgaataaaatacgtttttgcctcctcg 44490404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 214
Target Start/End: Original strand, 48888684 - 48888811
Alignment:
Q  85 tgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgacagttaac 184  Q
    |||| ||| ||| |||||| ||||||||||| ||||||||||||   |||| ||||| |||||  |||||||||||||| || | |||||  ||||||||    
T  48888684 tgttcacatatttcataagactgaggcacacaagtaaaatacgtaaatgccccctcggcagtt--actgccgaggaattaaaaatccggctgcagttaac 48888781  T
Q  185 tactacggaaaatctcgacagttaactgcc 214  Q
    | |   |||||||||||  |||||||||||    
T  48888782 tgccgaggaaaatctcggtagttaactgcc 48888811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 133
Target Start/End: Complemental strand, 6506090 - 6506033
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttg 133  Q
    |||||||  ||||||||||||| ||||||||||||||||| |||||  ||||||||||    
T  6506090 gagaattactgttgacacattgtataaggctgaggcacacgagtaatttacgtttttg 6506033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 7245096 - 7245141
Alignment:
Q  87 ttgacacattgcataaggctgaggcacaccagtaaaatacgttttt 132  Q
    |||||||||| ||||||| |||||||||| ||||||||||||||||    
T  7245096 ttgacacatttcataaggttgaggcacacaagtaaaatacgttttt 7245141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 133
Target Start/End: Complemental strand, 32060351 - 32060294
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttg 133  Q
    |||||||||| || ||||||||||||||||||||||| || |||||  ||||||||||    
T  32060351 gagaattgtttttaacacattgcataaggctgaggcatacgagtaatttacgtttttg 32060294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 43568858 - 43568919
Alignment:
Q  74 atgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcc 135  Q
    |||| ||||||||||||||||||  |||||||||||  |||| ||||||||||| |||||||    
T  43568858 atgaaaattgttgttgacacattttataaggctgagaaacacgagtaaaatacgcttttgcc 43568919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 216
Target Start/End: Original strand, 42756097 - 42756232
Alignment:
Q  80 attgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgacag 179  Q
    |||||||||||||||||  |||||| | ||  |||  ||||||||||||||||||| ||||  ||| ||||||| ||||||||| || | ||||   |||    
T  42756097 attgttgttgacacatttgataaggttcagaaacatgagtaaaatacgtttttgccccctcagcag-ttaactgtcgaggaattaaaaatccggttgcag 42756195  T
Q  180 ttaactactacggaaaatctcgacagttaactgccga 216  Q
    |||||| |   |||||| ||||| |||||||||||||    
T  42756196 ttaactgccgaggaaaacctcgagagttaactgccga 42756232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 135
Target Start/End: Original strand, 44227062 - 44227122
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcc 135  Q
    |||||||||||||| |||||||  ||||| |||||| |||| ||||||||||| |||||||    
T  44227062 tgagaattgttgttcacacatttgataagactgaggaacacgagtaaaatacgattttgcc 44227122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 160
Target Start/End: Complemental strand, 51696654 - 51696571
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgagga 160  Q
    |||||||||||||| ||||||  ||||||||| ||||||| |||||  ||| |||||||| |||||  || ||||||||||||||    
T  51696654 gagaattgttgttgccacatttgataaggctgtggcacacgagtaatttacttttttgccccctcggtag-ttaactgccgagga 51696571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 135
Target Start/End: Original strand, 47070398 - 47070461
Alignment:
Q  72 taatgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcc 135  Q
    |||||||||||||||||  ||||||||||||| ||| ||||||| |||||   |||||||||||    
T  47070398 taatgagaattgttgttcccacattgcataagactgtggcacacgagtaattgacgtttttgcc 47070461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 41802888 - 41802938
Alignment:
Q  72 taatgagaattgttgttgacacattgcataaggctgaggcacaccagtaaa 122  Q
    ||||||||||||||||||||||||| |||| |||||||  |||| ||||||    
T  41802888 taatgagaattgttgttgacacatttcatatggctgagaaacacgagtaaa 41802938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 163
Target Start/End: Complemental strand, 48251015 - 48250922
Alignment:
Q  69 ggttaatgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaatt 163  Q
    ||||||||||||||||||||  |||||| ||||||| || | ||||  | ||||  ||||||||||| ||||| ||| |||||||| ||||||||    
T  48251015 ggttaatgagaattgttgttcccacattacataaggttgtgccacataaataaatgacgtttttgccccctcggcag-ttaactgctgaggaatt 48250922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 157
Target Start/End: Original strand, 55385074 - 55385151
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccga 157  Q
    ||||||||||  |||||||||||||| || ||||||| |||||   ||||||||||| ||||| ||| |||||||||||    
T  55385074 aattgttgttcccacattgcataaggttgtggcacacgagtaattgacgtttttgccccctcggcag-ttaactgccga 55385151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 147
Target Start/End: Complemental strand, 11511414 - 11511341
Alignment:
Q  74 atgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtt 147  Q
    ||||||||||| ||||||||||   |||||||||||  |||||||||||| |||    ||||||||||||||||    
T  11511414 atgagaattgtcgttgacacatgttataaggctgagaaacaccagtaaaagacgaaaatgcctcctcgacagtt 11511341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 212
Target Start/End: Complemental strand, 49196565 - 49196453
Alignment:
Q  99 ataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgacagttaactactacggaaaatc 198  Q
    |||||||||||  |||| ||||||||||||||||||| |||||| ||  |||||| ||||||||| || | ||||   |||||||||||   |||||| |    
T  49196565 ataaggctgagaaacacgagtaaaatacgtttttgccccctcgatag-ctaactgtcgaggaattaaaaatccggttgcagttaactaccgaggaaaacc 49196467  T
Q  199 tcgacagttaactg 212  Q
     ||| |||||||||    
T  49196466 gcgatagttaactg 49196453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 187
Target Start/End: Complemental strand, 7839611 - 7839528
Alignment:
Q  103 ggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgacagttaactac 187  Q
    |||||||  |||| |||||  |||||||||||| ||||| ||||  ||||| |||||||||||| |||||||  |||||||||||    
T  7839611 ggctgagatacacgagtaatttacgtttttgccccctcggcagta-aactgtcgaggaattcaaaaaccggctgcagttaactac 7839528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 77 - 133
Target Start/End: Original strand, 34722219 - 34722275
Alignment:
Q  77 agaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttg 133  Q
    |||||||||||| |||||||  |||||||||||  |||| ||||||||||| |||||    
T  34722219 agaattgttgtttacacatttgataaggctgagaaacacgagtaaaatacgattttg 34722275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 49219907 - 49219844
Alignment:
Q  99 ataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaatt 163  Q
    ||||||||| | ||||| ||||||||||  |||||||||||||  || |||||||||||||||||    
T  49219907 ataaggctgtgccacactagtaaaatacaattttgcctcctcggtag-ttaactgccgaggaatt 49219844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 4e-32; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 79 - 185
Target Start/End: Complemental strand, 29700438 - 29700333
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgaca 178  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||  ||    
T  29700438 aattgttgttgacacatttcataaggctgaggcacacaagtaaaatacgcttttgtctcctcgacag-ttaactgctgaggaattcaataaccggctgca 29700340  T
Q  179 gttaact 185  Q
    |||||||    
T  29700339 gttaact 29700333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 76 - 185
Target Start/End: Complemental strand, 49573039 - 49572931
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcg 175  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||| ||||||| ||||||||||||||| ||||     
T  49573039 gagaatcgttgttgacacattgcataaggctgaggcacacaagtaaaatacgtttttgccccatcgacag-ttaactgtcgaggaattcaataatcggct 49572941  T
Q  176 acagttaact 185  Q
     |||||||||    
T  49572940 gcagttaact 49572931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 69 - 185
Target Start/End: Complemental strand, 21472630 - 21472515
Alignment:
Q  69 ggttaatgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaata 168  Q
    ||||||||| |||||||||||||||||| ||||||||||||  |||| ||||||||||||||||||| ||||| ||| |||||||||||||||||||| |    
T  21472630 ggttaatgaaaattgttgttgacacatttcataaggctgagaaacacgagtaaaatacgtttttgccgcctcggcag-ttaactgccgaggaattcaaaa 21472532  T
Q  169 accggcgacagttaact 185  Q
    | ||||  |||||||||    
T  21472531 atcggctgcagttaact 21472515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 79 - 185
Target Start/End: Complemental strand, 37959856 - 37959751
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgaca 178  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||||||| || ||||| ||| |||||||  |||||||| ||||||| ||  ||    
T  37959856 aattgttgttgacacattacataaggctgaggcacacgagtaaaatacgtttttaccccctcggcag-ttaactgttgaggaatttaataaccagctgca 37959758  T
Q  179 gttaact 185  Q
    |||||||    
T  37959757 gttaact 37959751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 76 - 161
Target Start/End: Complemental strand, 44051231 - 44051147
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaa 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| | ||| | | |||||||||||||||    
T  44051231 gagaattgttgttgacacattgcataaggctgaggcacaccagtaatttacgtttttgccccatcggc-ggttaactgccgaggaa 44051147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 75 - 216
Target Start/End: Complemental strand, 4980057 - 4979917
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggc 174  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||  ||||||||| |  ||||| ||| ||||||| ||| || ||||| |||||||    
T  4980057 tgagaattgttgttgacacattgcataaggttgaggcacacgagtaatttacgtttttcctccctcggcag-ttaactgtcgacgatttcaaaaaccggc 4979959  T
Q  175 gacagttaactactacggaaaatctcgacagttaactgccga 216  Q
      ||||||||| ||  ||||| | |||  |||||||||||||    
T  4979958 tgcagttaactgctgaggaaattatcggtagttaactgccga 4979917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 79 - 166
Target Start/End: Original strand, 4768615 - 4768701
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaa 166  Q
    |||||||||||||||||| ||||||||||| |||||| |||||||||   ||||||| ||||| ||| ||||||||||||||||||||    
T  4768615 aattgttgttgacacatttcataaggctgatgcacacaagtaaaatataattttgccccctcggcag-ttaactgccgaggaattcaa 4768701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 79 - 185
Target Start/End: Original strand, 955729 - 955834
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgaca 178  Q
    ||||| |||||||||||| ||||| | |||||||||| ||||||||||||||||||||| | | ||| |||||||| ||||||||||| || ||||  ||    
T  955729 aattgatgttgacacatttcataaagttgaggcacacaagtaaaatacgtttttgcctctttggcag-ttaactgctgaggaattcaaaaatcggctgca 955827  T
Q  179 gttaact 185  Q
    |||||||    
T  955828 gttaact 955834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 79 - 216
Target Start/End: Complemental strand, 44561466 - 44561330
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgaca 178  Q
    |||||||||||||||||| ||||||||||||  |||| ||||||||||| |||||||  ||||   | |||||||||||| || | || |||||||  ||    
T  44561466 aattgttgttgacacatttcataaggctgagaaacacgagtaaaatacgattttgccctctcggttg-ttaactgccgagtaaataaaaaaccggctgca 44561368  T
Q  179 gttaactactacggaaaatctcgacagttaactgccga 216  Q
    |||||||||   |||||||||||  |||||||||||||    
T  44561367 gttaactaccgaggaaaatctcggtagttaactgccga 44561330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 183
Target Start/End: Original strand, 51426474 - 51426577
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgaca 178  Q
    ||||||||||||||| || ||||||||| |||||||| ||||||||||||||||| |   ||||||| ||||||| |||||||||||| || ||||  ||    
T  51426474 aattgttgttgacacgtttcataaggcttaggcacacaagtaaaatacgtttttgtcctttcgacag-ttaactgtcgaggaattcaaaaatcggctgca 51426572  T
Q  179 gttaa 183  Q
    |||||    
T  51426573 gttaa 51426577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 188
Target Start/End: Original strand, 6280789 - 6280902
Alignment:
Q  74 atgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccgg 173  Q
    ||||||||||||||||||||||||||||||| || ||||||| |||||  ||||||||||||  |||| ||| ||||||| | | ||||| || ||||||    
T  6280789 atgagaattgttgttgacacattgcataaggttggggcacacgagtaatttacgtttttgccctctcggcag-ttaactgtcaaagaatttaaaaaccgg 6280887  T
Q  174 cgacagttaactact 188  Q
    |  ||||||| ||||    
T  6280888 ctgcagttaaatact 6280902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 185
Target Start/End: Complemental strand, 34154538 - 34154433
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgaca 178  Q
    |||||||||||||||||| ||||||||||||  ||||  ||||||||| |||||| | | ||| ||| ||||||||||||||||| || |||||||  ||    
T  34154538 aattgttgttgacacatttcataaggctgagaaacacgggtaaaatacatttttgtcccatcggcag-ttaactgccgaggaattaaaaaaccggctgca 34154440  T
Q  179 gttaact 185  Q
    |||||||    
T  34154439 gttaact 34154433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 75 - 185
Target Start/End: Complemental strand, 38464905 - 38464797
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggc 174  Q
    |||||||||||||||||||||| ||||||| ||||| |||  ||||||||| | |||||| |||||||||| |||| || |||||||||| | |||||||    
T  38464905 tgagaattgttgttgacacatttcataaggttgaggtacatgagtaaaatatgattttgcttcctcgacag-ttaaatgacgaggaattcga-aaccggc 38464808  T
Q  175 gacagttaact 185  Q
      |||||||||    
T  38464807 tgcagttaact 38464797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 79 - 216
Target Start/End: Complemental strand, 958729 - 958594
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgaca 178  Q
    ||||| ||||||||||||  ||||||||||||||||  ||||||||||||||||| |  |||||||| ||||||| ||| |||||||| ||||||   ||    
T  958729 aattgatgttgacacattttataaggctgaggcacataagtaaaatacgtttttgtcctctcgacag-ttaactg-cgatgaattcaaaaaccggttgca 958632  T
Q  179 gttaactactacggaaaatctcgacagttaactgccga 216  Q
    ||||||| |   |||||| ||||  |||||||||||||    
T  958631 gttaactgccgaggaaaacctcggtagttaactgccga 958594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 44558637 - 44558693
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcc 135  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||  |||||||    
T  44558637 aattgttgttgacacattacataaggctgaggcacacaagtaaaatacacttttgcc 44558693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 79 - 166
Target Start/End: Original strand, 21470840 - 21470926
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaa 166  Q
    ||||||| || |||||||| |||||| |||||||||| ||||||||||||||||| || |||| ||| ||||||| ||||| ||||||    
T  21470840 aattgttctttacacattggataaggttgaggcacacaagtaaaatacgtttttgtcttctcggcag-ttaactgtcgaggtattcaa 21470926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 73 - 163
Target Start/End: Original strand, 50274691 - 50274780
Alignment:
Q  73 aatgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaatt 163  Q
    ||||||||||||||||  ||||||  ||| ||||| ||||||| |||||  |||||||||||| ||||| ||| |||||||||||||||||    
T  50274691 aatgagaattgttgttcccacatttgatagggctgtggcacacgagtaatttacgtttttgccccctcggcag-ttaactgccgaggaatt 50274780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 77 - 146
Target Start/End: Original strand, 4975752 - 4975821
Alignment:
Q  77 agaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagt 146  Q
    ||||||||| ||||||||||| | ||||||||||||||| |||||  ||||||||| || ||||||||||    
T  4975752 agaattgttattgacacattgaaaaaggctgaggcacacgagtaatttacgtttttaccccctcgacagt 4975821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 216
Target Start/End: Original strand, 9889927 - 9890067
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggc 174  Q
    ||||||||||||||  |||||   ||||||||| | ||||||||||||||||| |||| || ||||| ||| |||||||||||||||||  | | |||||    
T  9889927 tgagaattgttgttcccacatgtgataaggctgtgccacaccagtaaaatacgattttaccccctcggcag-ttaactgccgaggaatttgaaatccggc 9890025  T
Q  175 gacagttaactactacggaaaatctcgacagttaactgccga 216  Q
      ||||||||| |   |||||| ||||  |||||||||||||    
T  9890026 tgcagttaactgccgaggaaaacctcggtagttaactgccga 9890067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 217
Target Start/End: Original strand, 11494478 - 11494617
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcg 175  Q
    |||||||||||| ||||||||  | |||| ||||  |||| ||||||||||||||||| | ||||| ||  ||||||| |||||||||||| |||||||     
T  11494478 gagaattgttgtcgacacatttgaaaagggtgagaaacacgagtaaaatacgtttttgtcccctcggca-attaactgtcgaggaattcaa-aaccggct 11494575  T
Q  176 acagttaactactacggaaaatctcgacagttaactgccgaa 217  Q
     ||||||||| |   |||||| ||||  ||||||||||||||    
T  11494576 gcagttaactgccgaggaaaacctcggtagttaactgccgaa 11494617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 48256699 - 48256650
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgt 128  Q
    |||||||||| ||||||| |||||||||||||||||| ||||||||||||    
T  48256699 aattgttgttcacacatttcataaggctgaggcacacaagtaaaatacgt 48256650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 75 - 163
Target Start/End: Original strand, 39588025 - 39588112
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaatt 163  Q
    ||||||||||||||  || ||||||||||| || | ||||| ||||||  ||||||||||| ||||| ||| |||||||||||||||||    
T  39588025 tgagaattgttgttctcatattgcataaggatgtgtcacacgagtaaatgacgtttttgccccctcggcag-ttaactgccgaggaatt 39588112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 76 - 124
Target Start/End: Complemental strand, 46097086 - 46097038
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaat 124  Q
    ||||||||||||||| |||||||||||||||||| ||||| ||||||||    
T  46097086 gagaattgttgttgatacattgcataaggctgagacacacgagtaaaat 46097038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 49422080 - 49422136
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcc 135  Q
    |||||||||| ||||||| |||||||||||| ||||| | |||||||||||||||||    
T  49422080 aattgttgtttacacatttcataaggctgagtcacacaaataaaatacgtttttgcc 49422136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 185
Target Start/End: Original strand, 8109325 - 8109433
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcg 175  Q
    |||||||||||||  ||||||  |||||||||||  |||| ||||||||||| |||| || ||| |  || ||||||| ||||||||| |||| |||||     
T  8109325 gagaattgttgttcccacatttgataaggctgagaaacacgagtaaaatacgattttacccccttggtag-ttaactgtcgaggaattaaatatccggct 8109423  T
Q  176 acagttaact 185  Q
    ||||||||||    
T  8109424 acagttaact 8109433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 185
Target Start/End: Original strand, 34151546 - 34151656
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaa-tacgtttttgcctcctcgacagt---ttaactgccgaggaattcaataaccggc 174  Q
    |||||||||||||| |||  |||| | |||||||||  ||||||| |||||||||||||||||| ||||   |||| ||||||| ||||||| || ||||    
T  34151546 aattgttgttgacatattagataacgttgaggcacataagtaaaaatacgtttttgcctcctcggcagttagttaaatgccgagtaattcaaaaatcggc 34151645  T
Q  175 gacagttaact 185  Q
      |||||||||    
T  34151646 tgcagttaact 34151656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 3450150 - 3450104
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaata 125  Q
    ||||| |||||||| ||| |||||||||||||||||| |||||||||    
T  3450150 aattgctgttgacatatttcataaggctgaggcacacaagtaaaata 3450104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 6283577 - 6283519
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttg 133  Q
    |||||||||||||||||||||| |||| | |||||  |||| ||||||||||| |||||    
T  6283577 tgagaattgttgttgacacatttcatatgactgagaaacacgagtaaaatacgcttttg 6283519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 18581431 - 18581385
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaata 125  Q
    |||||||||||||||||| ||||||| |||||||||| ||| |||||    
T  18581431 aattgttgttgacacatttcataaggttgaggcacacaagttaaata 18581385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 121
Target Start/End: Original strand, 28320492 - 28320538
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaa 121  Q
    |||||||||||||||||||||||||||||| || | ||||| |||||    
T  28320492 tgagaattgttgttgacacattgcataaggttgtgtcacacgagtaa 28320538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 121
Target Start/End: Original strand, 46165679 - 46165725
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaa 121  Q
    ||||||||||||||||||||||| ||||||||| | ||||| |||||    
T  46165679 tgagaattgttgttgacacattgtataaggctgtgtcacactagtaa 46165725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 159
Target Start/End: Original strand, 51683199 - 51683276
Alignment:
Q  81 ttgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgagg 159  Q
    |||||||| | |||||  |||||||||||  |||| ||||||||||||||||||| ||||  ||| |||||||||||||    
T  51683199 ttgttgttcatacattcgataaggctgagaaacacgagtaaaatacgtttttgccccctcagcag-ttaactgccgagg 51683276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 157
Target Start/End: Original strand, 16983456 - 16983536
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccga 157  Q
    ||||||||||||| |||||||  ||||||||| | ||||| ||||||  |||||||| || ||||| ||| |||||||||||    
T  16983456 gagaattgttgtttacacatttgataaggctgtgccacacgagtaaatgacgtttttaccccctcggcag-ttaactgccga 16983536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 105
Target Start/End: Original strand, 44049086 - 44049115
Alignment:
Q  76 gagaattgttgttgacacattgcataaggc 105  Q
    ||||||||||||||||||||||||||||||    
T  44049086 gagaattgttgttgacacattgcataaggc 44049115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 18578605 - 18578672
Alignment:
Q  98 cataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaa 166  Q
    |||| ||| ||| ||||| |||||||||| |||||||||||| | ||| ||||||| ||||||||||||    
T  18578605 catatggcagagacacacaagtaaaatacatttttgcctccttggcag-ttaactgtcgaggaattcaa 18578672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 127
Target Start/End: Complemental strand, 24417551 - 24417503
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacg 127  Q
    |||||||||||||||||  ||||| |||||| ||||| |||||||||||    
T  24417551 aattgttgttgacacatatcataacgctgagacacacgagtaaaatacg 24417503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 147
Target Start/End: Original strand, 51642012 - 51642068
Alignment:
Q  91 cacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtt 147  Q
    |||||||||||||| ||   ||||| |||||||||||||||||| | ||||||||||    
T  51642012 cacattgcataaggatgtatcacacgagtaaaatacgtttttgctttctcgacagtt 51642068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 51644610 - 51644554
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcc 135  Q
    ||||||||||||||||||  || |||||||||||||  ||||||||||  |||||||    
T  51644610 aattgttgttgacacattttattaggctgaggcacataagtaaaataccattttgcc 51644554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 2e-30; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 76 - 187
Target Start/End: Original strand, 48314608 - 48314717
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcg 175  Q
    ||||||||||||||||||||||||||||| ||||| |||| |||||||||| |||||||| ||||| ||| ||||||||||||||||||||||||||||     
T  48314608 gagaattgttgttgacacattgcataaggttgaggtacacaagtaaaatacatttttgcc-cctcggcag-ttaactgccgaggaattcaataaccggct 48314705  T
Q  176 acagttaactac 187  Q
     |||||||||||    
T  48314706 gcagttaactac 48314717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 76 - 218
Target Start/End: Complemental strand, 46863483 - 46863342
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcg 175  Q
    |||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||| | ||| ||| |||||||||||| |||| || |||||||     
T  46863483 gagaattgttgttgacgcattgcataaggctgagacacacaagtaaaatacgtttttgccccatcggcag-ttaactgccgagaaattgaaaaaccggct 46863385  T
Q  176 acagttaactactacggaaaatctcgacagttaactgccgaag 218  Q
     ||||||||| | |  |||||||||   |||||||||||||||    
T  46863384 gcagttaactgcgaacgaaaatctctgtagttaactgccgaag 46863342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 75 - 174
Target Start/End: Original strand, 21185552 - 21185650
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggc 174  Q
    |||||||||||||||||||||||||||| | |||| ||||  ||||||||||| ||||||||||||| ||| ||||||||||| ||||||||||||||||    
T  21185552 tgagaattgttgttgacacattgcataatgatgagacacataagtaaaatacgattttgcctcctcggcag-ttaactgccgaagaattcaataaccggc 21185650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 74 - 173
Target Start/End: Complemental strand, 28980314 - 28980216
Alignment:
Q  74 atgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccgg 173  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||  ||| ||| ||||||| |||||||||| ||||    
T  28980314 atgagaattgttgttgacacattgcataaggctgagacacacgagtaaaatacgtttttgccccctcagcag-ttagctgccgaagaattcaatatccgg 28980216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 75 - 166
Target Start/End: Original strand, 36392058 - 36392148
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaa 166  Q
    |||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||| ||||||||| |||||||  |||||||||||    
T  36392058 tgagaattgttgttgacacattacataaggcttaggcacacaagtaaaatacgtttttgccccctcgacag-ttaactgttgaggaattcaa 36392148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 74 - 163
Target Start/End: Original strand, 34622431 - 34622519
Alignment:
Q  74 atgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaatt 163  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||| ||| ||||| |||||||| ||||||||    
T  34622431 atgagaattgttgttgacacattgcataaggctgaggcacacaagtaatttacgtttttgcccccttgacag-ttaactgcagaggaatt 34622519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 79 - 185
Target Start/End: Complemental strand, 9494942 - 9494837
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgaca 178  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||| || | |||| ||||| ||| ||||||||||||||||| || |||||||  ||    
T  9494942 aattgttgttgacacatttcataaggctgaggcacacaagtaaaataggtatatgccccctcggcag-ttaactgccgaggaattaaaaaaccggctgca 9494844  T
Q  179 gttaact 185  Q
    |||||||    
T  9494843 gttaact 9494837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 217
Target Start/End: Original strand, 46860444 - 46860585
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggc 174  Q
    ||||||| | || ||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||| ||| ||||||| ||||||||| || ||||| |    
T  46860444 tgagaatcgctgatgacacattacataaggctgaggcacacaagtaaaatacgcttttgccccctcggcag-ttaactgtcgaggaattgaaaaaccgac 46860542  T
Q  175 gacagttaactactacggaaaatctcgacagttaactgccgaa 217  Q
      |||||||||| |  || ||| |||| |||||||||||||||    
T  46860543 tgcagttaactattgaggcaaacctcggcagttaactgccgaa 46860585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 76 - 174
Target Start/End: Original strand, 48269615 - 48269711
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggc 174  Q
    |||||||||||||||||||||  ||||||||||||||||| ||||||||| |||||| ||| |||| ||| ||||||||||| ||||||||||||||||    
T  48269615 gagaattgttgttgacacattttataaggctgaggcacacaagtaaaatatgtttttccct-ctcggcag-ttaactgccgaagaattcaataaccggc 48269711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 76 - 166
Target Start/End: Original strand, 47060861 - 47060950
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaa 166  Q
    ||||||| ||||||||| ||| ||||||||||||||| || ||||||||||||||||||| ||||| ||| ||||||| ||||||||||||    
T  47060861 gagaattattgttgacatatttcataaggctgaggcatacaagtaaaatacgtttttgccccctcggcag-ttaactgtcgaggaattcaa 47060950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 76 - 174
Target Start/End: Complemental strand, 48316399 - 48316302
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggc 174  Q
    |||| ||||||||| |||||| |||||||||||| ||||| ||||||||| ||||||||| ||| ||||| ||||||||||| || |||||||||||||    
T  48316399 gagatttgttgttggcacatttcataaggctgagacacacaagtaaaataagtttttgcccccttgacag-ttaactgccgaagacttcaataaccggc 48316302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 79 - 164
Target Start/End: Complemental strand, 36186608 - 36186524
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattc 164  Q
    ||||||||||||||||||||||||||||| | ||||| ||||||||||| ||||||| ||||| ||| |||| |||||||||||||    
T  36186608 aattgttgttgacacattgcataaggctgtgtcacacgagtaaaatacgcttttgccccctcggcag-ttaaatgccgaggaattc 36186524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 19044227 - 19044285
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttg 133  Q
    |||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||    
T  19044227 tgagaattattgttgacacattgcataaggctgaggcacatgagtaaaatacgtttttg 19044285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 20710409 - 20710351
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttg 133  Q
    |||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||    
T  20710409 tgagaattattgttgacacattgcataaggctgaggcacatgagtaaaatacgtttttg 20710351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 75 - 173
Target Start/End: Original strand, 37340235 - 37340332
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccgg 173  Q
    ||||||||| |||||||||||| |||||| || |||||||  | ||||||||||||||| ||| ||||||| ||||||| |||||||||||| ||||||    
T  37340235 tgagaattgatgttgacacattacataagactaaggcacataaataaaatacgtttttgtctcttcgacag-ttaactgtcgaggaattcaaaaaccgg 37340332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 41623956 - 41623895
Alignment:
Q  74 atgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcc 135  Q
    |||||||||| |||||||||||| ||||||| |||||||||| |||||||||||||||||||    
T  41623956 atgagaattgctgttgacacattacataaggttgaggcacacaagtaaaatacgtttttgcc 41623895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 79 - 217
Target Start/End: Complemental strand, 10225980 - 10225842
Alignment:
Q  79 aattgttgttgacacattg-cataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgac 177  Q
    ||||||||||||||||||  ||||||||||| |||||  ||||||||| ||||||||||||||||||| ||||||| ||| |||| ||| ||  | |       
T  10225980 aattgttgttgacacattttcataaggctgaagcacataagtaaaatatgtttttgcctcctcgacag-ttaactgtcgatgaatgcaaaaattgactga 10225882  T
Q  178 agttaactactacggaaaatctcgacagttaactgccgaa 217  Q
    ||||||||||   ||||||||||| ||||||||| |||||    
T  10225881 agttaactaccgaggaaaatctcggcagttaactaccgaa 10225842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 76 - 147
Target Start/End: Complemental strand, 21190727 - 21190656
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtt 147  Q
    |||||||||||||||||||||||||||| || ||  |||| ||||||||||||||||||| ||||| |||||    
T  21190727 gagaattgttgttgacacattgcataagtctaagaaacacgagtaaaatacgtttttgccccctcggcagtt 21190656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 76 - 163
Target Start/End: Complemental strand, 34623519 - 34623433
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaatt 163  Q
    |||||||| |||||||| ||||||||||| |||| ||||| |||||  |||||||||||||| ||| ||| |||||||||||||||||    
T  34623519 gagaattgctgttgacatattgcataaggttgagacacacgagtaatttacgtttttgcctcatcggcag-ttaactgccgaggaatt 34623433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 76 - 135
Target Start/End: Original strand, 46596830 - 46596889
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcc 135  Q
    |||||||| ||| |||||||||||||||||||| |||||| |||||||||||||||||||    
T  46596830 gagaattgctgtggacacattgcataaggctgacgcacacgagtaaaatacgtttttgcc 46596889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 76 - 133
Target Start/End: Complemental strand, 41049327 - 41049270
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttg 133  Q
    ||||||||||||||||||||||||||||||||| |||||  ||||||||||| |||||    
T  41049327 gagaattgttgttgacacattgcataaggctgatgcacataagtaaaatacgcttttg 41049270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 76 - 216
Target Start/End: Complemental strand, 30355378 - 30355239
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcg 175  Q
    ||||||||||||||||||||| |||| | |||||  |||| ||||||||||| ||||||| ||||| ||| |||| ||| || |||||||| || ||||     
T  30355378 gagaattgttgttgacacatttcatatgactgagaaacacgagtaaaatacgcttttgccccctcggcag-ttaattgctgaagaattcaaaaatcggct 30355280  T
Q  176 acagttaactactacggaaaatctcgacagttaactgccga 216  Q
     ||||||||| |   |||||| ||||  |||||||||||||    
T  30355279 gcagttaactgccgaggaaaacctcggtagttaactgccga 30355239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 73 - 163
Target Start/End: Original strand, 47776263 - 47776352
Alignment:
Q  73 aatgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaatt 163  Q
    ||||||||||| ||||  ||||||  |||||||||||  |||| ||||||||||| ||||||| ||||||||| |||||||||||| ||||    
T  47776263 aatgagaattgatgttcccacatttgataaggctgagaaacacgagtaaaatacgattttgccccctcgacag-ttaactgccgagaaatt 47776352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 28112779 - 28112835
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcc 135  Q
    |||||||||||||||||| ||||||| |||| ||||| ||||||||||| |||||||    
T  28112779 aattgttgttgacacatttcataaggttgagacacacaagtaaaatacgcttttgcc 28112835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 76 - 144
Target Start/End: Original strand, 47741714 - 47741782
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgaca 144  Q
    |||||||||||||  |||||| ||||||| || | ||||| ||||||||||||||||||| ||||||||    
T  47741714 gagaattgttgttctcacattacataaggttgtgccacactagtaaaatacgtttttgccccctcgaca 47741782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 133
Target Start/End: Complemental strand, 42684292 - 42684245
Alignment:
Q  86 gttgacacattgcataaggctgaggcacaccagtaaaatacgtttttg 133  Q
    ||||||| |||||||||||||||| ||||| |||||||||||||||||    
T  42684292 gttgacatattgcataaggctgagacacacaagtaaaatacgtttttg 42684245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 185
Target Start/End: Complemental strand, 27453734 - 27453625
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggc 174  Q
    |||||||||||||| |||||||  |||||||| ||  |||  |||||||||||  |||||| ||||| ||| ||||||||||||||||| || | |||||    
T  27453734 tgagaattgttgttcacacatttgataaggcttagaaacataagtaaaatacgactttgccccctcggcag-ttaactgccgaggaattaaaaatccggc 27453636  T
Q  175 gacagttaact 185  Q
      |||||||||    
T  27453635 tgcagttaact 27453625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 158
Target Start/End: Complemental strand, 40590630 - 40590549
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgag 158  Q
    |||||||||||||  ||||||  |||||||||||  |||| | ||||||||||||||||| ||||| ||| ||||||||||||    
T  40590630 gagaattgttgttcccacatttgataaggctgagaaacacgaataaaatacgtttttgccccctcggcag-ttaactgccgag 40590549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 134
Target Start/End: Original strand, 41047712 - 41047770
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgc 134  Q
    |||||||||||||||||||||||||||| ||| ||||||  | |||||||| |||||||    
T  41047712 gagaattgttgttgacacattgcataagactgcggcacataaataaaatacatttttgc 41047770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 141
Target Start/End: Original strand, 42681925 - 42681993
Alignment:
Q  73 aatgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcg 141  Q
    ||||||||||||| |||||| |||  ||||||||||||||||  |||||||| | |||||| |||||||    
T  42681925 aatgagaattgttcttgacatattttataaggctgaggcacataagtaaaatgcatttttgtctcctcg 42681993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 163
Target Start/End: Complemental strand, 29593467 - 29593381
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaatt 163  Q
    |||||||||||||  ||||||  |||||| || | ||||| ||||||||||  |||| || ||||||||| |||||||||||||||||    
T  29593467 gagaattgttgttcccacatttgataaggttgtgccacactagtaaaatacaattttaccccctcgacag-ttaactgccgaggaatt 29593381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 121
Target Start/End: Original strand, 35839323 - 35839369
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaa 121  Q
    |||||||||||||||||||||||||||||| || | ||||| |||||    
T  35839323 tgagaattgttgttgacacattgcataaggttgtgtcacactagtaa 35839369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 121
Target Start/End: Complemental strand, 39173241 - 39173195
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaa 121  Q
    |||||||||||||||||| |||||||||||||| | ||||| |||||    
T  39173241 tgagaattgttgttgacagattgcataaggctgtgtcacactagtaa 39173195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 121
Target Start/End: Complemental strand, 30471678 - 30471633
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaa 121  Q
    |||||||||||||||||||||||| ||||||| | ||||| |||||    
T  30471678 gagaattgttgttgacacattgcaaaaggctgtgtcacacgagtaa 30471633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 107
Target Start/End: Complemental strand, 26833610 - 26833578
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctg 107  Q
    |||||||||||||||||||||| ||||||||||    
T  26833610 tgagaattgttgttgacacattacataaggctg 26833578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 161
Target Start/End: Original strand, 36185800 - 36185853
Alignment:
Q  106 tgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaa 161  Q
    |||||||||| ||||||||||| ||||||| ||||| |||||  ||||||||||||    
T  36185800 tgaggcacacaagtaaaatacgattttgccccctcggcagtt--actgccgaggaa 36185853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 1e-29; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 75 - 217
Target Start/End: Complemental strand, 6437679 - 6437538
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggc 174  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||  |||| ||| ||||||||||||||| ||||||| || |    
T  6437679 tgagaattgttgttgacacattgcataaagctgaggcacacaagtaaaatacgcttttgccctctcggcag-ttaactgccgaggaagtcaataatcgac 6437581  T
Q  175 gacagttaactactacggaaaatctcgacagttaactgccgaa 217  Q
      ||||||||||| | |||||| ||||  ||||| ||||||||    
T  6437580 tgcagttaactaccaaggaaaacctcggtagttatctgccgaa 6437538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 79 - 185
Target Start/End: Original strand, 19053996 - 19054101
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgaca 178  Q
    |||||||||||||||||| ||||||||||||  |||| ||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||  ||    
T  19053996 aattgttgttgacacatttcataaggctgagaaacacgagtaaaatacgtttttgccccctcgacag-ttaactgccgaggaattcaaaaaccggctgca 19054094  T
Q  179 gttaact 185  Q
    |||||||    
T  19054095 gttaact 19054101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 75 - 185
Target Start/End: Original strand, 46141715 - 46141824
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggc 174  Q
    |||||||||||||||||| ||||||||||||||||| |||| ||||||||||| |||||||  |||| ||| ||||||||||||||||||||||||||||    
T  46141715 tgagaattgttgttgacatattgcataaggctgaggtacacaagtaaaatacgattttgccctctcggcag-ttaactgccgaggaattcaataaccggc 46141813  T
Q  175 gacagttaact 185  Q
      |||||||||    
T  46141814 tgcagttaact 46141824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 75 - 185
Target Start/End: Original strand, 49924789 - 49924898
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggc 174  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||| | ||| ||  |||||||||||  ||||||| |||||||    
T  49924789 tgagaattgttgttgacacattgcataaggctgaggcacacgagtaatttacgtttttgccccttcggca-attaactgccgaaaaattcaaaaaccggc 49924887  T
Q  175 gacagttaact 185  Q
     ||||||||||    
T  49924888 tacagttaact 49924898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 79 - 185
Target Start/End: Complemental strand, 41804169 - 41804064
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgaca 178  Q
    ||||||||||||||||||  ||||||||||||||||| ||||||||||| ||||||| | ||| ||| |||||||||||||||||||| ||||| |  ||    
T  41804169 aattgttgttgacacattttataaggctgaggcacacaagtaaaatacgcttttgccccttcggcag-ttaactgccgaggaattcaaaaaccgactgca 41804071  T
Q  179 gttaact 185  Q
    |||||||    
T  41804070 gttaact 41804064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 79 - 185
Target Start/End: Original strand, 46973141 - 46973246
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgaca 178  Q
    |||||||||||||||||| ||| |||||||| ||||| ||||||||||| ||||||| ||| | ||| |||||||||||||||||||| |||||||  ||    
T  46973141 aattgttgttgacacatttcattaggctgagacacacaagtaaaatacgattttgcccccttggcag-ttaactgccgaggaattcaaaaaccggctgca 46973239  T
Q  179 gttaact 185  Q
    |||||||    
T  46973240 gttaact 46973246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 74 - 170
Target Start/End: Complemental strand, 18975261 - 18975166
Alignment:
Q  74 atgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataac 170  Q
    |||||||||||||||||||||||| |||| ||||||| |||| ||||||||||||||||||| ||||| | | ||||||| ||||||||| ||||||    
T  18975261 atgagaattgttgttgacacattgtataaagctgaggtacacaagtaaaatacgtttttgccccctcggc-ggttaactgtcgaggaatttaataac 18975166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 79 - 185
Target Start/End: Original strand, 36908515 - 36908620
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgaca 178  Q
    ||||| ||||||||||||  |||||| |||||||||| |||||||||| |||||||||||||| ||| ||||||| ||| |||||||| |||||||  ||    
T  36908515 aattgatgttgacacattttataaggatgaggcacacaagtaaaatacatttttgcctcctcggcag-ttaactgtcgaagaattcaaaaaccggctgca 36908613  T
Q  179 gttaact 185  Q
    |||||||    
T  36908614 gttaact 36908620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 79 - 184
Target Start/End: Original strand, 13173773 - 13173876
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgaca 178  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||  ||||||| ||||| ||| |||||||| | ||||||||| |||||||  ||    
T  13173773 aattgttgttgacacatttcataaggctgaggcacacaagtaaaatactattttgccccctcggcag-ttaactgctg-ggaattcaaaaaccggctgca 13173870  T
Q  179 gttaac 184  Q
    ||||||    
T  13173871 gttaac 13173876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 76 - 213
Target Start/End: Complemental strand, 23276247 - 23276111
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcg 175  Q
    ||||||||||||| || ||||  |||||||||||  |||| ||||||||||||||||||| ||||| ||| |||||||| |||||||| || | |||||     
T  23276247 gagaattgttgttcacgcatttgataaggctgagaaacacgagtaaaatacgtttttgccccctcggcag-ttaactgctgaggaattaaaaatccggct 23276149  T
Q  176 acagttaactactacggaaaatctcgacagttaactgc 213  Q
    |||||||||| |   |||||| ||||| ||||||||||    
T  23276148 acagttaactgccgaggaaaacctcgatagttaactgc 23276111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 76 - 163
Target Start/End: Original strand, 13971998 - 13972083
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaatt 163  Q
    ||||||||||||||||||||| ||||||||||||  |||| ||||||||||||||||||| | ||| |||||  ||||||||||||||    
T  13971998 gagaattgttgttgacacatttcataaggctgagaaacacaagtaaaatacgtttttgccccttcggcagtt--actgccgaggaatt 13972083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 79 - 183
Target Start/End: Original strand, 35521551 - 35521654
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgaca 178  Q
    ||||||||||||||||||  ||||||||||||||||| ||||||||||| |||||||  |||| ||| ||||||||||||||| | || |||||||  ||    
T  35521551 aattgttgttgacacattttataaggctgaggcacacaagtaaaatacgattttgccctctcggcag-ttaactgccgaggaaataaaaaaccggctgca 35521649  T
Q  179 gttaa 183  Q
    |||||    
T  35521650 gttaa 35521654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 73 - 185
Target Start/End: Complemental strand, 49927655 - 49927544
Alignment:
Q  73 aatgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccg 172  Q
    |||||||||||||||||||||||| |||| ||| |||  |||| ||||||||||||||||| | ||||| ||| ||||||||||| ||||| || |||||    
T  49927655 aatgagaattgttgttgacacatttcatatggccgagaaacacgagtaaaatacgtttttgtcccctcggcag-ttaactgccgaagaatttaaaaaccg 49927557  T
Q  173 gcgacagttaact 185  Q
    || | ||||||||    
T  49927556 gctatagttaact 49927544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 135
Target Start/End: Original strand, 1872042 - 1872101
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcc 135  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||    
T  1872042 gagaattgttgttgacacattgcataaggctgaggcacacgagtaaaatatgcttttgcc 1872101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 79 - 217
Target Start/End: Original strand, 26633467 - 26633601
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgaca 178  Q
    |||||||||||||||||| ||||||| |||||||||| ||||||||||| ||||||| ||||    | |||||| |||| |||||||| ||||||   ||    
T  26633467 aattgttgttgacacatttcataaggttgaggcacacaagtaaaatacgcttttgccccctc----ggttaactaccgaagaattcaaaaaccggttgca 26633562  T
Q  179 gttaactactacggaaaatctcgacagttaactgccgaa 217  Q
    ||||||| |   |||||| ||||  ||||||||||||||    
T  26633563 gttaactgccgaggaaaacctcggtagttaactgccgaa 26633601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 141
Target Start/End: Original strand, 14172051 - 14172113
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcg 141  Q
    |||||||||||||||||| ||||||||||| |||||| ||||||||||| ||||||| |||||    
T  14172051 aattgttgttgacacattccataaggctgaagcacacaagtaaaatacgcttttgccccctcg 14172113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 87 - 185
Target Start/End: Complemental strand, 35527141 - 35527044
Alignment:
Q  87 ttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgacagttaact 185  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||| || | ||| |||| |||||| ||| |||| ||| |||  |||||||||    
T  35527141 ttgacacatttcataaggctgaggcacacaagtaaaatacgtttttgccttcttggcag-ttaattgccgaagaaatcaaaaacaggctgcagttaact 35527044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 76 - 185
Target Start/End: Original strand, 11183120 - 11183228
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcg 175  Q
    |||||||||||||||||||||  |||||||||||  | || ||||||||||||||||||  ||| ||||| |||||||| |||||||| || | |||||     
T  11183120 gagaattgttgttgacacatttgataaggctgagaaatacgagtaaaatacgtttttgctcccttgacag-ttaactgctgaggaattaaaaatccggct 11183218  T
Q  176 acagttaact 185  Q
     |||||||||    
T  11183219 gcagttaact 11183228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 42570079 - 42570147
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtt 147  Q
    ||||||||||||||| || |||||||||||||||||| ||||||| ||| |||| | ||||||||||||    
T  42570079 aattgttgttgacacgtttcataaggctgaggcacacaagtaaaacacgattttacatcctcgacagtt 42570147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 162
Target Start/End: Original strand, 37014883 - 37014969
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaat 162  Q
    ||||||||||||||  ||||||  |||| | || ||||||| ||||||||||| ||||||| ||||||||| ||||||||||||||||    
T  37014883 tgagaattgttgttcccacatttgataatgttgtggcacactagtaaaatacgattttgccccctcgacag-ttaactgccgaggaat 37014969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 185
Target Start/End: Original strand, 27484993 - 27485101
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcg 175  Q
    |||||||| ||||  ||||||  |||||||||||  |||| ||||||||||||||||||| ||||| ||| ||||||||| ||||||| || | |||||     
T  27484993 gagaattgctgttcccacatttgataaggctgagaaacacgagtaaaatacgtttttgccccctcggcag-ttaactgcctaggaattaaaaatccggct 27485091  T
Q  176 acagttaact 185  Q
     |||||||||    
T  27485092 gcagttaact 27485101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 216
Target Start/End: Original strand, 38689869 - 38690004
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgaca 178  Q
    |||||||||||||||||||||||| |||| | ||||  ||||||||||| |||| || |||||  || |||| || |||||||||| | |||||||  ||    
T  38689869 aattgttgttgacacattgcataaagctgtgtcacatgagtaaaatacgcttttaccccctcggtag-ttaaatgtcgaggaattcga-aaccggctgca 38689966  T
Q  179 gttaactactacggaaaatctcgacagttaactgccga 216  Q
    ||||||| | | |||||| ||||  |||||||||||||    
T  38689967 gttaactgccaaggaaaacctcggtagttaactgccga 38690004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 164
Target Start/End: Complemental strand, 51666774 - 51666690
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattc 164  Q
    ||||| |||||||||||||||||| |||| | ||||| ||||||||||| ||||||| ||||| ||| |||| ||||||| |||||    
T  51666774 aattgatgttgacacattgcataaagctgtgtcacacgagtaaaatacgcttttgccccctcggcag-ttaaatgccgagtaattc 51666690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 76 - 216
Target Start/End: Complemental strand, 8460235 - 8460097
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcg 175  Q
    |||||||| ||||||||||||  ||||||||||||||||  ||||| ||||||||||| | |||||  || |||||  ||||||||||  | || ||||     
T  8460235 gagaattgctgttgacacattctataaggctgaggcacatgagtaatatacgtttttgtcccctcggtag-ttaacaaccgaggaatttga-aatcggct 8460138  T
Q  176 acagttaactactacggaaaatctcgacagttaactgccga 216  Q
     ||||||||| | | |||||||||||  |||||||||||||    
T  8460137 gcagttaactgccaaggaaaatctcggtagttaactgccga 8460097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 29261352 - 29261419
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtt 147  Q
    ||||||||||||||| || |||||||| || |||||  ||||||||||||||||||||||||| |||||    
T  29261352 aattgttgttgacacgtttcataaggc-gatgcacagaagtaaaatacgtttttgcctcctcggcagtt 29261419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 80 - 166
Target Start/End: Complemental strand, 36911803 - 36911720
Alignment:
Q  80 attgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaa 166  Q
    ||||||||||||||||| ||||||||||||||  |  |||||||||||||||||  |||||| ||||   |||||||| ||||||||    
T  36911803 attgttgttgacacatttcataaggctgaggcggataagtaaaatacgtttttgtttcctcggcagt---actgccgaagaattcaa 36911720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 121
Target Start/End: Original strand, 9618654 - 9618701
Alignment:
Q  74 atgagaattgttgttgacacattgcataaggctgaggcacaccagtaa 121  Q
    |||||||||||||||||||||||||||||||||| | ||||| |||||    
T  9618654 atgagaattgttgttgacacattgcataaggctgtgtcacacgagtaa 9618701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 35181329 - 35181380
Alignment:
Q  74 atgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaata 125  Q
    ||||||||||||||||||||||||||||| ||||| |||||| | |||||||    
T  35181329 atgagaattgttgttgacacattgcataaagctgaagcacacgaataaaata 35181380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 121
Target Start/End: Original strand, 640986 - 641032
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaa 121  Q
    ||||||||||||||||||||||||||||||||| | ||||| |||||    
T  640986 tgagaattgttgttgacacattgcataaggctgtgtcacactagtaa 641032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 145
Target Start/End: Complemental strand, 1656220 - 1656155
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacag 145  Q
    |||||||||||||||||| ||||||| ||||  |||| ||||||||| ||||||||| |||||||||    
T  1656220 aattgttgttgacacatttcataaggttgagaaacacgagtaaaatatgtttttgcc-cctcgacag 1656155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 141
Target Start/End: Original strand, 6434690 - 6434752
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcg 141  Q
    ||||| |||||||| ||||||| |||||||||||||| ||||||||||| ||| ||| |||||    
T  6434690 aattgatgttgacatattgcatgaggctgaggcacacgagtaaaatacgatttcgccccctcg 6434752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 216
Target Start/End: Complemental strand, 13178266 - 13178132
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgaca 178  Q
    |||||||||||||||||| ||| |||||  |  | || ||||||||||||||||||  ||||| ||||| |||||| ||| |||| || |||| ||  ||    
T  13178266 aattgttgttgacacatttcattaggctatg--aaacgagtaaaatacgtttttgctccctcggcagtt-aactgctgagaaatttaaaaaccagctgca 13178170  T
Q  179 gttaactactacggaaaatctcgacagttaactgccga 216  Q
    ||||||| ||  |||||| ||||| |||||||||||||    
T  13178169 gttaactgctgaggaaaacctcgagagttaactgccga 13178132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 8458918 - 8458975
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgttttt 132  Q
    ||||||||| |||||||||||||| ||||| || | ||||| ||||||||||||||||    
T  8458918 tgagaattgatgttgacacattgcttaaggttgtgtcacacgagtaaaatacgttttt 8458975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 121
Target Start/End: Complemental strand, 22346152 - 22346107
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaa 121  Q
    |||||||| |||||||||||||| |||||||||||||||| |||||    
T  22346152 gagaattgctgttgacacattgcttaaggctgaggcacacaagtaa 22346107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 126
Target Start/End: Complemental strand, 7981271 - 7981219
Alignment:
Q  74 atgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatac 126  Q
    |||| |||||||||||||||||| ||||||| ||||| |||| ||||||||||    
T  7981271 atgaaaattgttgttgacacatttcataaggttgaggaacacaagtaaaatac 7981219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 163
Target Start/End: Complemental strand, 9711791 - 9711704
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaatt 163  Q
    ||||||||||||||  ||||||  |||||| || ||||||| ||||||||||| ||||||| | ||  ||| |||||||||||||||||    
T  9711791 tgagaattgttgttcccacatttgataaggttgtggcacactagtaaaatacgattttgccccatcagcag-ttaactgccgaggaatt 9711704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 131
Target Start/End: Complemental strand, 36076693 - 36076641
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttt 131  Q
    ||||| |||||||||||| ||||||||||||  |||| |||||||||||||||    
T  36076693 aattgctgttgacacatttcataaggctgagaaacacaagtaaaatacgtttt 36076641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 6562410 - 6562452
Alignment:
Q  176 acagttaactactacggaaaatctcgacagttaactgccgaag 218  Q
    |||||||||||||  |||||||||||||| |||||||||||||    
T  6562410 acagttaactactgaggaaaatctcgacaattaactgccgaag 6562452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 133
Target Start/End: Original strand, 7965978 - 7966032
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttg 133  Q
    |||||||||||||| ||| ||||||| |||||||||  |||||||||| ||||||    
T  7965978 aattgttgttgacatatttcataaggttgaggcacaaaagtaaaatacatttttg 7966032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 121
Target Start/End: Complemental strand, 27650130 - 27650084
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaa 121  Q
    ||||||| ||||||||||||||||||||||||| | ||||| |||||    
T  27650130 tgagaatcgttgttgacacattgcataaggctgtgtcacactagtaa 27650084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 133
Target Start/End: Original strand, 36072307 - 36072361
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttg 133  Q
    |||||||||||||||||| ||||||| | |||||||| | ||||||||| |||||    
T  36072307 aattgttgttgacacatttcataaggttaaggcacacaaataaaatacgattttg 36072361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 19499246 - 19499180
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtt 147  Q
    ||||||||||  |||||  |||||| ||||| ||||| ||||||||||||||||||  |||||||||||    
T  19499246 aattgttgttcgcacatatcataagactgagacacacaagtaaaatacgtttttgc--cctcgacagtt 19499180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 185
Target Start/End: Original strand, 23272783 - 23272891
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcg 175  Q
    ||||||||||||| | |||||  |||||| ||||  | || ||||||||||||||||  | ||||| ||| ||||||||||||||||| |||| || ||     
T  23272783 gagaattgttgttcatacatttgataaggatgagaaatacgagtaaaatacgtttttttcccctcgccag-ttaactgccgaggaattaaatatccagct 23272881  T
Q  176 acagttaact 185  Q
     |||||||||    
T  23272882 gcagttaact 23272891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 121
Target Start/End: Original strand, 49874942 - 49874987
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaa 121  Q
    ||||||||||||||||||||||||||||| || | ||||| |||||    
T  49874942 gagaattgttgttgacacattgcataaggttgtgtcacacgagtaa 49874987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 135
Target Start/End: Original strand, 26944412 - 26944472
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcc 135  Q
    ||||||||||||||  |||||| |||||||||| | ||||| ||||||  |||||||||||    
T  26944412 tgagaattgttgttcccacattacataaggctgtgccacacgagtaaatgacgtttttgcc 26944472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 157
Target Start/End: Complemental strand, 46886529 - 46886446
Alignment:
Q  73 aatgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccga 157  Q
    |||||||||||||||| |||||||  |||||| || |  |||| ||||||  ||||||||||| ||||| ||| |||||||||||    
T  46886529 aatgagaattgttgtttacacatttgataaggttgtgctacacgagtaaatgacgtttttgccccctcggcag-ttaactgccga 46886446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 4e-29; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 76 - 217
Target Start/End: Original strand, 18438568 - 18438708
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcg 175  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||| | ||| ||| |||||||  |||||||||||||||||||     
T  18438568 gagaattgttgttgacacattgcataaggctgatgcacacaagtaaaatacgcttttgccccttcggcag-ttaactgttgaggaattcaataaccggct 18438666  T
Q  176 acagttaactactacggaaaatctcgacagttaactgccgaa 217  Q
     ||||||||| |   |||||| ||||  ||||||||||||||    
T  18438667 gcagttaactgccgaggaaaacctcgggagttaactgccgaa 18438708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 76 - 172
Target Start/End: Complemental strand, 18441580 - 18441485
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccg 172  Q
    ||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||| ||||| ||| |||||||||||| |||||||||||||    
T  18441580 gagaattgttgttgacacatttcataaggctgagacacacaagtaaaatacgtttttgccccctcggcag-ttaactgccgagaaattcaataaccg 18441485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 79 - 185
Target Start/End: Original strand, 7168025 - 7168130
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgaca 178  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||||||| | ||| ||||||| |||||||| |||||||  ||    
T  7168025 aattgttgttgacacatttcataaggctgaggcacacaagtaaaatacgattttgccccctcgactg-ttagctgccgaagaattcaaaaaccggctgca 7168123  T
Q  179 gttaact 185  Q
    |||||||    
T  7168124 gttaact 7168130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 76 - 185
Target Start/End: Original strand, 35389442 - 35389550
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcg 175  Q
    |||||||||||||||||||||||||||||||||| || || |||||  |||||||||||||| ||||||| |||||||||||| ||||||| |||| ||     
T  35389442 gagaattgttgttgacacattgcataaggctgagacatacgagtaatttacgtttttgcctcttcgacag-ttaactgccgagaaattcaaaaaccagct 35389540  T
Q  176 acagttaact 185  Q
     |||||||||    
T  35389541 gcagttaact 35389550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 185
Target Start/End: Complemental strand, 41858261 - 41858152
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggc 174  Q
    |||||||||||||||||||||| |||| |||||||  |||| ||||||||||||||||||| ||||| ||| ||||||| ||| |||||||| |||||||    
T  41858261 tgagaattgttgttgacacatttcatatggctgagaaacacgagtaaaatacgtttttgccccctcggcag-ttaactggcgaagaattcaaaaaccggc 41858163  T
Q  175 gacagttaact 185  Q
      |||||||||    
T  41858162 tgcagttaact 41858152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 80 - 185
Target Start/End: Original strand, 41855306 - 41855410
Alignment:
Q  80 attgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgacag 179  Q
    ||||||||||||||||| |||| |||||||  |||  ||||||||||||||||||||||||| ||| ||||||| ||| |||||||| || ||||  |||    
T  41855306 attgttgttgacacatttcatatggctgagaaacatgagtaaaatacgtttttgcctcctcggcag-ttaactgtcgaagaattcaaaaatcggctgcag 41855404  T
Q  180 ttaact 185  Q
    ||||||    
T  41855405 ttaact 41855410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 71 - 163
Target Start/End: Original strand, 45454335 - 45454426
Alignment:
Q  71 ttaatgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaatt 163  Q
    |||| |||||||||||||  ||||||  ||||| ||| ||||||| ||||||||||| ||||||||||||| ||| |||||||||||||||||    
T  45454335 ttaaagagaattgttgttcccacatttgataagactgtggcacactagtaaaatacgattttgcctcctcggcag-ttaactgccgaggaatt 45454426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 76 - 135
Target Start/End: Original strand, 39751008 - 39751067
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcc 135  Q
    |||||||| |||||||||||||||||| | |||||||||| |||||||||||||||||||    
T  39751008 gagaattgctgttgacacattgcataatgttgaggcacacgagtaaaatacgtttttgcc 39751067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 76 - 135
Target Start/End: Complemental strand, 43377391 - 43377332
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcc 135  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||  ||||||||||||    
T  43377391 gagaattgttgttgacacgttgcataaggctgaggcacacgagtaatttacgtttttgcc 43377332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 74 - 163
Target Start/End: Original strand, 3395824 - 3395912
Alignment:
Q  74 atgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaatt 163  Q
    |||| ||||| | |||||||||| ||||||| |||||||||| ||||||||| ||||||||| ||||  ||||| |||||||||||||||    
T  3395824 atgaaaattgctcttgacacatttcataaggttgaggcacacaagtaaaatatgtttttgccccctcagcagtt-aactgccgaggaatt 3395912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 99 - 216
Target Start/End: Original strand, 18205743 - 18205859
Alignment:
Q  99 ataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgacagttaactactacggaaaatc 198  Q
    |||||||||||  |||| |||||||||||||||| || ||||| | ||| ||||||||| |||||||| |||||||  ||||||||| | | |||||| |    
T  18205743 ataaggctgagaaacacgagtaaaatacgtttttaccacctcggcggtt-aactgccgaagaattcaaaaaccggctgcagttaactgccaaggaaaacc 18205841  T
Q  199 tcgacagttaactgccga 216  Q
    |||  |||||||||||||    
T  18205842 tcggtagttaactgccga 18205859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 40077389 - 40077325
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctc 140  Q
    |||||||||||||||||||||  |||||||||||  |||| ||||||||||||||||||| ||||    
T  40077389 gagaattgttgttgacacatttgataaggctgagaaacacgagtaaaatacgtttttgccccctc 40077325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 147
Target Start/End: Original strand, 5300681 - 5300752
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtt 147  Q
    |||||||||||||||||||||  |||||| ||||  |||| ||||||||||||||||| | |||||||||||    
T  5300681 gagaattgttgttgacacatttgataaggttgagaaacacgagtaaaatacgtttttgtcccctcgacagtt 5300752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 163
Target Start/End: Complemental strand, 34823155 - 34823069
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaatt 163  Q
    |||||||||||||||||||||| |||||| ||||||||||  |||| ||||||||||| |  |||| ||| ||||||| |||||||||    
T  34823155 gagaattgttgttgacacattgtataaggttgaggcacacacgtaatatacgtttttgtcctctcggcag-ttaactgtcgaggaatt 34823069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 185
Target Start/End: Complemental strand, 38873067 - 38872961
Alignment:
Q  78 gaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgac 177  Q
    |||||||||  |||||||||||||||||||| |||||| ||||||| |  |||||| | ||||| ||| |||||| |||||||||| || |||||||  |    
T  38873067 gaattgttgacgacacattgcataaggctgatgcacacaagtaaaaaatatttttgtcccctcgtcag-ttaactaccgaggaatttaaaaaccggctgc 38872969  T
Q  178 agttaact 185  Q
    ||||||||    
T  38872968 agttaact 38872961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 163
Target Start/End: Complemental strand, 39753136 - 39753050
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaatt 163  Q
    |||||||||||||||||||||| |||||||| |||||||| |||||  ||| |||||| | | ||| ||| |||||||||||||||||    
T  39753136 gagaattgttgttgacacattgtataaggctcaggcacacgagtaatttacatttttgtcccatcggcag-ttaactgccgaggaatt 39753050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 163
Target Start/End: Complemental strand, 5304285 - 5304197
Alignment:
Q  74 atgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaatt 163  Q
    ||||||||||||||| |||||||  ||||||||||   |||| |||||||||||||||| || ||||| ||| ||||||||| |||||||    
T  5304285 atgagaattgttgttcacacatttgataaggctgaaaaacacgagtaaaatacgtttttaccccctcggcag-ttaactgccaaggaatt 5304197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 147
Target Start/End: Original strand, 43188007 - 43188078
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtt 147  Q
    |||||||||||||  ||||||  |||||||||||  |||| ||||||||||| ||||||| |||||||||||    
T  43188007 gagaattgttgttctcacatttgataaggctgagaaacacgagtaaaatacgattttgccccctcgacagtt 43188078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 134
Target Start/End: Original strand, 38871741 - 38871791
Alignment:
Q  84 ttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgc 134  Q
    ||||||||||||| ||||||  |||||||||| ||||||||||||||||||    
T  38871741 ttgttgacacatttcataagattgaggcacacaagtaaaatacgtttttgc 38871791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 121
Target Start/End: Complemental strand, 2147095 - 2147050
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaa 121  Q
    |||||||||||||||||||||| |||||| |||||||||| |||||    
T  2147095 gagaattgttgttgacacattgtataaggttgaggcacacgagtaa 2147050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 147
Target Start/End: Complemental strand, 28168724 - 28168667
Alignment:
Q  88 tgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtt 147  Q
    ||||||||| ||||||| |||||||||  ||||||||| ||||||||||||||| |||||    
T  28168724 tgacacatttcataaggatgaggcaca--agtaaaatatgtttttgcctcctcggcagtt 28168667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 161
Target Start/End: Complemental strand, 39847069 - 39846986
Alignment:
Q  77 agaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaa 161  Q
    ||||||||||||  ||||||  |||||||||||  |||| ||||||||| | ||||||| ||||| ||| |||||||||||||||    
T  39847069 agaattgttgttcccacatttgataaggctgagaaacacgagtaaaataagattttgccccctcgccag-ttaactgccgaggaa 39846986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 163
Target Start/End: Original strand, 1114677 - 1114763
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaatt 163  Q
    |||||||||||||  |||||   ||||||||| | ||||||||||||||||| |||| || ||||| ||| |||||||||||| ||||    
T  1114677 gagaattgttgttcccacatgtgataaggctgtgccacaccagtaaaatacgattttaccccctcggcag-ttaactgccgagaaatt 1114763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 75 - 134
Target Start/End: Complemental strand, 43690173 - 43690114
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgc 134  Q
    |||||||||  ||||||||||| ||||||||||| | | || ||||||||||||||||||    
T  43690173 tgagaattgccgttgacacatttcataaggctgaagtatacaagtaaaatacgtttttgc 43690114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 163
Target Start/End: Complemental strand, 44052365 - 44052279
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaatt 163  Q
    |||||||||||||  |||||| ||||||| || ||||||| ||||||  ||||||||||| |||||  || |||| ||||||||||||    
T  44052365 gagaattgttgttcccacattacataaggttgtggcacacgagtaaatgacgtttttgccccctcggtag-ttaattgccgaggaatt 44052279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 147
Target Start/End: Original strand, 3641577 - 3641651
Alignment:
Q  73 aatgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtt 147  Q
    ||||||||||| ||||  ||||||  ||||||||  ||||||| |||||  |||||||||||| |||||||||||    
T  3641577 aatgagaattgatgttcccacatttgataaggctatggcacacgagtaatttacgtttttgccccctcgacagtt 3641651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 121
Target Start/End: Complemental strand, 34503198 - 34503152
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaa 121  Q
    |||||||||||||||||||||||||||||| || | ||||| |||||    
T  34503198 tgagaattgttgttgacacattgcataagggtgtgtcacacgagtaa 34503152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 161
Target Start/End: Original strand, 34234517 - 34234601
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaa 161  Q
    ||||||||||||| |||||||  ||||||||| | ||||| ||||||  |||||||| || |||||  || |||||||||||||||    
T  34234517 gagaattgttgtttacacatttgataaggctgtgccacacgagtaaatgacgtttttaccccctcggtag-ttaactgccgaggaa 34234601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 115
Target Start/End: Original strand, 51342 - 51378
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacac 115  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  51342 aattgttgttgacacatttcataaggctcaggcacac 51378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 4866372 - 4866420
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacg 127  Q
    |||||||||| ||||||  |||||||||||| ||||| |||||||||||    
T  4866372 aattgttgttcacacatatcataaggctgagacacacgagtaaaatacg 4866420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 73 - 163
Target Start/End: Original strand, 18605976 - 18606065
Alignment:
Q  73 aatgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaatt 163  Q
    ||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||| |||||  || ||||||||| |||||||    
T  18605976 aatgagaattgttgttgacacattgtatgaggctgaggcacacgagtaaaatacgtttttgccccctcggtag-ttaactgcctaggaatt 18606065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 185
Target Start/End: Complemental strand, 13404770 - 13404663
Alignment:
Q  77 agaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcga 176  Q
    |||||||||||| |||||||||||||||| ||||||||| |||||||||||  |||||| |||||  || ||||||| ||||||||||||||||| ||      
T  13404770 agaattgttgttaacacattgcataaggccgaggcacacaagtaaaatacgcgtttgccccctcggtag-ttaactgtcgaggaattcaataacctgctg 13404672  T
Q  177 cagttaact 185  Q
    |||||||||    
T  13404671 cagttaact 13404663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 79 - 185
Target Start/End: Original strand, 13479663 - 13479768
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgaca 178  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| |||||  || ||||||| || ||||||||| |||| ||  ||    
T  13479663 aattgttgttgacacatttcataaggctgaggcacacaagtaaaatacgcttttgccccctcggtag-ttaactgtcggggaattcaaaaaccagctgca 13479761  T
Q  179 gttaact 185  Q
    |||||||    
T  13479762 gttaact 13479768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 76 - 161
Target Start/End: Original strand, 29286163 - 29286247
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaa 161  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||  |||||||||||| |||||  || |||||||||||||||    
T  29286163 gagaattgttgttgacacattgcataaggttgaggcacacaagtaatttacgtttttgccccctcggtag-ttaactgccgaggaa 29286247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 79 - 133
Target Start/End: Original strand, 32026042 - 32026096
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttg 133  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  32026042 aattgttgttgacacatttcataaggctgaggcacacaagtaaaatacgtttttg 32026096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 12784074 - 12783999
Alignment:
Q  98 cataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggc 174  Q
    |||||||||||||||||| ||||||||||| ||||||| | ||| ||| ||||||||||| ||||||||||||||||    
T  12784074 cataaggctgaggcacacaagtaaaatacgcttttgccccatcggcag-ttaactgccgatgaattcaataaccggc 12783999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 76 - 163
Target Start/End: Original strand, 2050963 - 2051049
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaatt 163  Q
    |||||||| | |||||||||||||||||||||| |||||| ||||||||||||||||||  | ||| ||| ||||||||||| |||||    
T  2050963 gagaattgctattgacacattgcataaggctgatgcacacgagtaaaatacgtttttgctccttcggcag-ttaactgccgatgaatt 2051049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 72 - 133
Target Start/End: Original strand, 7361121 - 7361182
Alignment:
Q  72 taatgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttg 133  Q
    |||||||||||| ||||||||||||||||||||||| ||||||| |||||  ||||||||||    
T  7361121 taatgagaattgctgttgacacattgcataaggctgtggcacacgagtaatttacgtttttg 7361182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 74 - 197
Target Start/End: Original strand, 13401418 - 13401540
Alignment:
Q  74 atgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccgg 173  Q
    |||||||||| ||||||||||||  |||||| ||||  |||| ||| ||||| | ||||||| ||||| ||| ||||||||||||||||| || || |||    
T  13401418 atgagaattgatgttgacacattttataaggttgagtaacacgagttaaatatgcttttgccccctcggcag-ttaactgccgaggaattaaaaaatcgg 13401516  T
Q  174 cgacagttaactactacggaaaat 197  Q
    |  ||||||||| ||| |||||||    
T  13401517 ctgcagttaactgctaaggaaaat 13401540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 173
Target Start/End: Complemental strand, 23986098 - 23986024
Alignment:
Q  98 cataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccgg 173  Q
    |||||||||||| ||||| ||||||||||||||||||| ||| | ||| |||||||||||| ||||||| ||||||    
T  23986098 cataaggctgagacacacaagtaaaatacgtttttgcccccttggcag-ttaactgccgagaaattcaaaaaccgg 23986024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 115
Target Start/End: Complemental strand, 25141218 - 25141179
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacac 115  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  25141218 gagaattgttgttgacacattgcataaggctgaggcacac 25141179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 34801482 - 34801555
Alignment:
Q  87 ttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaa 161  Q
    |||||||||| ||||| ||||||| |||| ||||||||||||||||| ||||||| ||| |||||||| ||||||    
T  34801482 ttgacacattacataatgctgaggaacacaagtaaaatacgtttttgtctcctcggcag-ttaactgctgaggaa 34801555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 216
Target Start/End: Original strand, 23958827 - 23958963
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgaca 178  Q
    |||||||||||||||||   ||||||||||| ||| | | ||||||||||||||| | ||||| ||| |||||||||||| ||||| | |||||||  ||    
T  23958827 aattgttgttgacacatatgataaggctgagacacccaactaaaatacgtttttgtcccctcggcag-ttaactgccgagaaattccaaaaccggctgca 23958925  T
Q  179 gttaactactacggaaaatctcgacagttaactgccga 216  Q
    ||||| | |   |||||| ||||  |||||||||||||    
T  23958926 gttaaatgccgaggaaaacctcggtagttaactgccga 23958963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 26702795 - 26702742
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgttttt 132  Q
    ||||||||||||||||||||||||||||| | ||||| ||||||||||| ||||    
T  26702795 aattgttgttgacacattgcataaggctgtgtcacacgagtaaaatacgctttt 26702742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 75 - 163
Target Start/End: Complemental strand, 2052722 - 2052636
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaatt 163  Q
    ||||||||||||||| ||||||| |||| |||||||||||| |||||  |||||||||| | ||||| ||| ||||||| |||||||||    
T  2052722 tgagaattgttgttggcacattgtataa-gctgaggcacacgagtaatttacgtttttgtcccctcggcag-ttaactgtcgaggaatt 2052636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 76 - 188
Target Start/End: Original strand, 29065674 - 29065785
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcg 175  Q
    |||||||||||||  ||||||  ||||||||| ||||||| |||||  ||| |||||||| ||||| ||| |||||||||||||||||  | | |||||     
T  29065674 gagaattgttgttcccacattaaataaggctgtggcacacgagtaatttacttttttgccccctcggcag-ttaactgccgaggaattagaaatccggct 29065772  T
Q  176 acagttaactact 188  Q
     ||||||||||||    
T  29065773 gcagttaactact 29065785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 76 - 188
Target Start/End: Original strand, 29074687 - 29074798
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcg 175  Q
    |||||||||||||  ||||||  ||||||||| ||||||| |||||  ||| |||||||| ||||| ||| |||||||||||||||||  | | |||||     
T  29074687 gagaattgttgttcccacattaaataaggctgtggcacacgagtaatttacttttttgccccctcggcag-ttaactgccgaggaattagaaatccggct 29074785  T
Q  176 acagttaactact 188  Q
     ||||||||||||    
T  29074786 gcagttaactact 29074798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 76 - 188
Target Start/End: Original strand, 29079451 - 29079562
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcg 175  Q
    |||||||||||||  ||||||  ||||||||| ||||||| |||||  ||| |||||||| ||||| ||| |||||||||||||||||  | | |||||     
T  29079451 gagaattgttgttcccacattaaataaggctgtggcacacgagtaatttacttttttgccccctcggcag-ttaactgccgaggaattagaaatccggct 29079549  T
Q  176 acagttaactact 188  Q
     ||||||||||||    
T  29079550 gcagttaactact 29079562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 76 - 188
Target Start/End: Original strand, 29107260 - 29107371
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcg 175  Q
    |||||||||||||  ||||||  ||||||||| ||||||| |||||  ||| |||||||| ||||| ||| |||||||||||||||||  | | |||||     
T  29107260 gagaattgttgttcccacattaaataaggctgtggcacacgagtaatttacttttttgccccctcggcag-ttaactgccgaggaattagaaatccggct 29107358  T
Q  176 acagttaactact 188  Q
     ||||||||||||    
T  29107359 gcagttaactact 29107371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 73 - 185
Target Start/End: Complemental strand, 35021405 - 35021294
Alignment:
Q  73 aatgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccg 172  Q
    |||||||||| |||||||||||||  ||| |||||||  |||| ||||||||||  ||||||| ||||| ||| |||| ||| || |||||||| |||||    
T  35021405 aatgagaattattgttgacacattttatatggctgagaaacacgagtaaaatacacttttgccccctcggcag-ttaaatgcggaagaattcaaaaaccg 35021307  T
Q  173 gcgacagttaact 185  Q
    ||  |||||||||    
T  35021306 gctgcagttaact 35021294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 163
Target Start/End: Original strand, 29061230 - 29061316
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaatt 163  Q
    |||||||| ||||  |||||| |||||||||| ||||||| |||||  ||| |||||||| ||||| ||||| |||||||||||||||    
T  29061230 gagaattggtgttcccacattacataaggctgtggcacacgagtaatttacttttttgccccctcggcagtt-aactgccgaggaatt 29061316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 185
Target Start/End: Complemental strand, 32643657 - 32643552
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgaca 178  Q
    |||||||||| ||||||| ||||||| ||| || ||| ||||||||||||   |||||||||| ||| ||||||||| ||||||| || | |||||  ||    
T  32643657 aattgttgttcacacatttcataaggttgaagcccacaagtaaaatacgtaaatgcctcctcggcag-ttaactgccaaggaattaaaaatccggctgca 32643559  T
Q  179 gttaact 185  Q
    |||||||    
T  32643558 gttaact 32643552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 187
Target Start/End: Original strand, 7537159 - 7537242
Alignment:
Q  103 ggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcgacagttaactac 187  Q
    ||||||||||||| |||||  |||||||||||| ||||| ||| |||| || ||||||||| || |||||||  |||||||||||    
T  7537159 ggctgaggcacacgagtaatttacgtttttgccccctcggcag-ttaattgtcgaggaattaaaaaaccggctgcagttaactac 7537242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 163
Target Start/End: Complemental strand, 6320627 - 6320542
Alignment:
Q  77 agaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaatt 163  Q
    |||||||||||||||| |||  |||||| ||||  |||| | ||||||| ||||||| ||||||| ||| ||||||| |||||||||    
T  6320627 agaattgttgttgacatatttgataaggttgagaaacacgaataaaatatgtttttgtctcctcggcag-ttaactgtcgaggaatt 6320542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 18001151 - 18001197
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaata 125  Q
    |||||||||||||||||| ||||||| ||||| |||| |||||||||    
T  18001151 aattgttgttgacacatttcataaggttgaggtacacaagtaaaata 18001197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 147
Target Start/End: Original strand, 26701795 - 26701857
Alignment:
Q  85 tgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtt 147  Q
    |||||||||||| ||| |||||||||||||| | ||||||| | |||||||  ||||||||||    
T  26701795 tgttgacacatttcattaggctgaggcacacaaataaaatatgattttgcccactcgacagtt 26701857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 216
Target Start/End: Original strand, 31768686 - 31768826
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggc 174  Q
    ||||||||||||||  ||||||  ||||||||| |  |||| |||||  ||| |||||||| ||||| ||| ||||||||||||||||| || | |||||    
T  31768686 tgagaattgttgttcccacatttgataaggctgtgtaacacgagtaatttacttttttgccccctcggcag-ttaactgccgaggaattaaaaatccggc 31768784  T
Q  175 gacagttaactactacggaaaatctcgacagttaactgccga 216  Q
      ||||||| | |   |||||| ||||  |||||||||||||    
T  31768785 tgcagttaattgccgaggaaaacctcggtagttaactgccga 31768826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 135
Target Start/End: Complemental strand, 18610329 - 18610285
Alignment:
Q  91 cacattgcataaggctgaggcacaccagtaaaatacgtttttgcc 135  Q
    ||||||| ||||||||| | ||||| |||||||||||||||||||    
T  18610329 cacattgtataaggctgtgtcacacgagtaaaatacgtttttgcc 18610285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 75 - 163
Target Start/End: Complemental strand, 1320 - 1233
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaatt 163  Q
    ||||||||| || |||||||||||||||||||||||||||| |||||  |||||||||| | ||||| ||| |||||||||||||||||    
T  1320 tgagaattgctgctgacacattgcataaggctgaggcacacgagtaatttacgtttttgtcccctcggcag-ttaactgccgaggaatt 1233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 74 - 174
Target Start/End: Complemental strand, 7446 - 7346
Alignment:
Q  74 atgagaattgtt-gttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccg 172  Q
    |||||||||||| ||||||| ||| ||||||| |||||||||  ||||||||| ||||||||||||| ||||| |||| ||| ||||||||||| |||||    
T  7446 atgagaattgttagttgacaaatttcataaggttgaggcacatgagtaaaatatgtttttgcctccttgacag-ttaattgctgaggaattcaaaaaccg 7348  T
Q  173 gc 174  Q
    ||    
T  7347 gc 7346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 76 - 135
Target Start/End: Complemental strand, 1784 - 1725
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcc 135  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||  ||||||||||||    
T  1784 gagaattgatgttgacacattgcataaggctgaggcacacgagtaatttacgtttttgcc 1725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 185
Target Start/End: Complemental strand, 20252 - 20143
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacg-tttttgcctcctcgacagtttaactgccgaggaattcaataaccggc 174  Q
    |||||||| |||| |||||||||||||||||||| ||||| |||||  |||| |||||||||| |   ||| |||||||||||||||||||| || ||||    
T  20252 gagaattgatgtttacacattgcataaggctgagacacacgagtaatttacgttttttgcctctttagcag-ttaactgccgaggaattcaaaaatcggc 20154  T
Q  175 gacagttaact 185  Q
     ||||||||||    
T  20153 tacagttaact 20143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 173
Target Start/End: Original strand, 15664 - 15733
Alignment:
Q  103 ggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccgg 173  Q
    ||||| ||||||| |||||  |||||||||||||| | ||||| ||||||| |||||||||||| ||||||    
T  15664 ggctgtggcacacgagtaatttacgtttttgcctcattgacag-ttaactgtcgaggaattcaaaaaccgg 15733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 185
Target Start/End: Original strand, 3820 - 3927
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaattcaataaccggcg 175  Q
    |||||||| |||||||| |||| |||||| |||||||||| |||||||||  |||||| | ||||| ||||| ||||| |||||||||||| || ||||     
T  3820 gagaattgatgttgacaaattggataaggttgaggcacacaagtaaaatat-tttttgtcccctcggcagtt-aactgtcgaggaattcaaaaatcggct 3917  T
Q  176 acagttaact 185  Q
     |||||||||    
T  3918 gcagttaact 3927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 121
Target Start/End: Original strand, 25886 - 25931
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaa 121  Q
    ||||||||||||||||||||||||||||||||||||| || |||||    
T  25886 gagaattgttgttgacacattgcataaggctgaggcatacgagtaa 25931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 132
Target Start/End: Original strand, 27375 - 27433
Alignment:
Q  74 atgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgttttt 132  Q
    |||| |||||||||||||||||| ||||| | | |||||||| ||||||||||||||||    
T  27375 atgaaaattgttgttgacacatttcataaagttaaggcacacaagtaaaatacgttttt 27433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0794 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0794
Description:

Target: scaffold0794; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 121
Target Start/End: Original strand, 5218 - 5263
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaa 121  Q
    |||||||| ||||||||||||| ||||||||||||||||| |||||    
T  5218 gagaattgctgttgacacattgtataaggctgaggcacacgagtaa 5263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 163
Target Start/End: Original strand, 17965 - 18051
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaatt 163  Q
    |||||||| ||||  ||||||  |||| | || ||||||| |||||  |||||||||||| ||||||||| |||||||||||||||||    
T  17965 gagaattgatgttcccacatttgataaagttgtggcacacgagtaatttacgtttttgccccctcgacag-ttaactgccgaggaatt 18051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 79 - 126
Target Start/End: Complemental strand, 15973 - 15926
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaatac 126  Q
    |||||||||||||||||| ||| ||||||||||| || ||||||||||    
T  15973 aattgttgttgacacatttcattaggctgaggcatacaagtaaaatac 15926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 163
Target Start/End: Original strand, 11235 - 11321
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaatt 163  Q
    |||||||| ||||  ||||||  ||||||||| | ||||| ||||||||||| |||| || ||||| ||| |||||||||||||||||    
T  11235 gagaattgctgttcccacatttgataaggctgtgccacactagtaaaatacgattttaccccctcggcag-ttaactgccgaggaatt 11321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 163
Target Start/End: Complemental strand, 54879 - 54793
Alignment:
Q  76 gagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaatt 163  Q
    |||||||| ||||  ||||||  |||| | || ||||||| |||||  |||||||||||| ||||||||| |||||||||||||||||    
T  54879 gagaattgatgttcccacatttgataaagttgtggcacacgagtaatttacgtttttgccccctcgacag-ttaactgccgaggaatt 54793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 17600 - 17642
Alignment:
Q  176 acagttaactactacggaaaatctcgacagttaactgccgaag 218  Q
    |||||||||||||  |||||||||||||| |||||||||||||    
T  17600 acagttaactactgaggaaaatctcgacaattaactgccgaag 17642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 931 - 885
Alignment:
Q  79 aattgttgttgacacattgcataaggctgaggcacaccagtaaaata 125  Q
    ||||| |||||||| ||| |||||||||||||||||| |||||||||    
T  931 aattgctgttgacatatttcataaggctgaggcacacaagtaaaata 885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 163
Target Start/End: Complemental strand, 574 - 487
Alignment:
Q  75 tgagaattgttgttgacacattgcataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaatt 163  Q
    ||||||||| |||| |||||||  ||||| |||||  |||| ||||||||||| ||||||  ||||| ||| ||||||||||| |||||    
T  574 tgagaattgatgtttacacatttgataagactgagaaacacgagtaaaatacgattttgctccctcggcag-ttaactgccgaagaatt 487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 788 - 851
Alignment:
Q  99 ataaggctgaggcacaccagtaaaatacgtttttgcctcctcgacagtttaactgccgaggaatt 163  Q
    ||||||||| | ||||||||||||||||| |||| || ||||| ||| ||||||||| |||||||    
T  788 ataaggctgtgccacaccagtaaaatacgattttaccccctcggcag-ttaactgcctaggaatt 851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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