View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8145_low_3 (Length: 259)
Name: NF8145_low_3
Description: NF8145
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8145_low_3 |
 | |
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| [»] scaffold1469 (1 HSPs) |
| | |
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| [»] scaffold0053 (1 HSPs) |
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| [»] scaffold0029 (2 HSPs) |
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| [»] scaffold0384 (1 HSPs) |
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| [»] scaffold0131 (1 HSPs) |
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| [»] scaffold0072 (1 HSPs) |
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| [»] scaffold0023 (1 HSPs) |
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| [»] scaffold1318 (1 HSPs) |
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| [»] scaffold0348 (1 HSPs) |
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| [»] scaffold0609 (1 HSPs) |
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| [»] scaffold0249 (1 HSPs) |
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| [»] scaffold0183 (1 HSPs) |
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| [»] scaffold0026 (1 HSPs) |
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| [»] scaffold0129 (1 HSPs) |
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| [»] scaffold0099 (1 HSPs) |
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| [»] scaffold0720 (1 HSPs) |
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| [»] scaffold0127 (1 HSPs) |
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| [»] scaffold0001 (1 HSPs) |
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| [»] scaffold0261 (1 HSPs) |
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| [»] scaffold0553 (2 HSPs) |
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| [»] scaffold0544 (1 HSPs) |
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| [»] scaffold0034 (1 HSPs) |
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| [»] scaffold2054 (1 HSPs) |
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| [»] scaffold0453 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 167; Significance: 2e-89; HSPs: 15)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 41 - 247
Target Start/End: Complemental strand, 20773040 - 20772834
Alignment:
| Q |
41 |
ctttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatcaatttaactgtttttaaggtaaaa |
140 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
20773040 |
ctttatctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttctgaaaattaatcaatttaactgttcttaaggtaaaa |
20772941 |
T |
|
| Q |
141 |
ttgggaaaattagggttaatgatgaattcgaagaaaatgtgtaagaatcaggtttataatgttgcatttgatgattaatatgatttcctactctgtattg |
240 |
Q |
| |
|
|||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||| |
|
|
| T |
20772940 |
ttgggaaatttagggttaatgatgattttgaagaaaatgtgtaagaatcaggtttataatgttgtatttgatgattagtatgatttcctactctatattg |
20772841 |
T |
|
| Q |
241 |
ttgatgt |
247 |
Q |
| |
|
||||||| |
|
|
| T |
20772840 |
ttgatgt |
20772834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 41 - 247
Target Start/End: Complemental strand, 20781815 - 20781609
Alignment:
| Q |
41 |
ctttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatcaatttaactgtttttaaggtaaaa |
140 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
20781815 |
ctttatctttgcaattctaaggtaagggtgggattatctttcaataattataatatatgatttctgaaaattaatcaatttaactgttcttaaggtaaaa |
20781716 |
T |
|
| Q |
141 |
ttgggaaaattagggttaatgatgaattcgaagaaaatgtgtaagaatcaggtttataatgttgcatttgatgattaatatgatttcctactctgtattg |
240 |
Q |
| |
|
|||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||| |
|
|
| T |
20781715 |
ttgggaaatttagggttaatgatgattttgaagaaaatgtgtaagaatcaggtttataatgttgtatttgatgattattatgatttcctactctatattg |
20781616 |
T |
|
| Q |
241 |
ttgatgt |
247 |
Q |
| |
|
||||||| |
|
|
| T |
20781615 |
ttgatgt |
20781609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 41 - 245
Target Start/End: Original strand, 24929912 - 24930117
Alignment:
| Q |
41 |
ctttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagt-aatcaatttaactgtttttaaggtaaa |
139 |
Q |
| |
|
|||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||| | |||||||||||||||| |||||||||| |
|
|
| T |
24929912 |
ctttatctttacaattctaaggtaagggtgggattatctttcaatagttctaatatatgatttctaaaaaattaatcaatttaactgttcttaaggtaaa |
24930011 |
T |
|
| Q |
140 |
attgggaaaattagggttaatgatgaattcgaagaaaatgtgtaagaatcaggtttataatgttgcatttgatgattaatatgatttcctactctgtatt |
239 |
Q |
| |
|
||||||||| |||||||||||||||| | |||| |||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||| || | |
|
|
| T |
24930012 |
attgggaaatttagggttaatgatgattctgaaggaaatgtgtaagaatcaggtttataatgttgtatttgatgattagtatgatttcctaatctataat |
24930111 |
T |
|
| Q |
240 |
gttgat |
245 |
Q |
| |
|
|||||| |
|
|
| T |
24930112 |
gttgat |
24930117 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 42 - 204
Target Start/End: Complemental strand, 19236970 - 19236807
Alignment:
| Q |
42 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatcaatttaactgtttttaaggtaaaat |
141 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||| ||||||||| ||||||| |||||||||||| |
|
|
| T |
19236970 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaat |
19236871 |
T |
|
| Q |
142 |
tgggaaaattagggttaatgatgaattcg-aagaaaatgtgtaagaatcaggtttataatgttg |
204 |
Q |
| |
|
||||||| |||||||||| ||||| || | ||||||| || |||| |||||||||||| ||||| |
|
|
| T |
19236870 |
tgggaaatttagggttaaggatgattttgaaagaaaaggtataaggatcaggtttatattgttg |
19236807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 42 - 238
Target Start/End: Original strand, 28909274 - 28909471
Alignment:
| Q |
42 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatcaatttaactgtttttaaggt-aaaa |
140 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| ||||||||||||| ||| |||||||||| |||||| ||| | |||||| |||| ||||||| |||| |
|
|
| T |
28909274 |
tttgtcgttgcaattctaaggtaagggtgggatcatctttcaatagtgatattatatgatttctgaaaattaaactatttaattgttcttaaggtaaaaa |
28909373 |
T |
|
| Q |
141 |
ttgggaaaattagggttaatgatgaattcgaagaaaatgtgtaagaatcaggtttataatgttgcatttgatgattaatatgatttcctactctgtat |
238 |
Q |
| |
|
|||||||||||||| || ||||||| || |||||||||| |||| | |||||||||| | |||| |||| ||||||| |||||||||||| ||||||| |
|
|
| T |
28909374 |
ttgggaaaattaggtttgatgatgattttgaagaaaatgcgtaaaattcaggtttatgacgttgtatttaatgattagtatgatttcctaatctgtat |
28909471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 42 - 238
Target Start/End: Original strand, 28945669 - 28945866
Alignment:
| Q |
42 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatcaatttaactgtttttaaggt-aaaa |
140 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| ||||||||||||| ||| |||||||||| |||||| ||| | |||||| |||| ||||||| |||| |
|
|
| T |
28945669 |
tttgtcgttgcaattctaaggtaagggtgggatcatctttcaatagtgatattatatgatttctgaaaattaaactatttaattgttcttaaggtaaaaa |
28945768 |
T |
|
| Q |
141 |
ttgggaaaattagggttaatgatgaattcgaagaaaatgtgtaagaatcaggtttataatgttgcatttgatgattaatatgatttcctactctgtat |
238 |
Q |
| |
|
|||||||||||||| || ||||||| || |||||||||| |||| | |||||||||| | |||| |||| ||||||| |||||||||||| ||||||| |
|
|
| T |
28945769 |
ttgggaaaattaggtttgatgatgattttgaagaaaatgcgtaaaattcaggtttatgacgttgtatttaatgattagtatgatttcctaatctgtat |
28945866 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 42 - 246
Target Start/End: Complemental strand, 22461226 - 22461020
Alignment:
| Q |
42 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttg-aaaagtaatcaatttaactgtttttaaggtaaaa |
140 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| || |||| ||||||||| ||||||| ||||||||||| |
|
|
| T |
22461226 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaaattaatcaattgaactgttcttaaggtaaaa |
22461127 |
T |
|
| Q |
141 |
ttgggaaaattagggttaatgatgaattcgaagaaaatgtgtaagaatcaggtttataatgttgca-tttgatgattaatatgatttcctactctgtatt |
239 |
Q |
| |
|
|||||||| |||||||||| ||||| || ||||||| || |||| |||||||||||| ||| | | ||||||| ||| |||| |||| || ||| | || |
|
|
| T |
22461126 |
ttgggaaatttagggttaaggatgatttgaaagaaaaggtataaggatcaggtttatattgtcgtactttgatgtttagtatgttttcttattctatgtt |
22461027 |
T |
|
| Q |
240 |
gttgatg |
246 |
Q |
| |
|
||||||| |
|
|
| T |
22461026 |
gttgatg |
22461020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 42 - 246
Target Start/End: Complemental strand, 22467850 - 22467644
Alignment:
| Q |
42 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttg-aaaagtaatcaatttaactgtttttaaggtaaaa |
140 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| || |||| ||||||||| ||||||| ||||||||||| |
|
|
| T |
22467850 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaaattaatcaattgaactgttcttaaggtaaaa |
22467751 |
T |
|
| Q |
141 |
ttgggaaaattagggttaatgatgaattcgaagaaaatgtgtaagaatcaggtttataatgttgca-tttgatgattaatatgatttcctactctgtatt |
239 |
Q |
| |
|
|||||||| |||||||||| ||||| || ||||||| || |||| |||||||||||| ||| | | ||||||| ||| |||| |||| || ||| | || |
|
|
| T |
22467750 |
ttgggaaatttagggttaaggatgatttgaaagaaaaggtataaggatcaggtttatattgtcgtactttgatgtttagtatgttttcttattctatgtt |
22467651 |
T |
|
| Q |
240 |
gttgatg |
246 |
Q |
| |
|
||||||| |
|
|
| T |
22467650 |
gttgatg |
22467644 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 49 - 238
Target Start/End: Original strand, 28889329 - 28889519
Alignment:
| Q |
49 |
ttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatcaatttaactgtttttaaggt-aaaattgggaa |
147 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||| ||| |||||||||| |||||| ||| | |||||| |||| ||||||| ||||||||||| |
|
|
| T |
28889329 |
ttgcaattctaaggtaagggtgggatcatctttcaatagtgatattatatgatttctgaaaattaaactatttaattgttcttaaggtaaaaattgggaa |
28889428 |
T |
|
| Q |
148 |
aattagggttaatgatgaattcgaagaaaatgtgtaagaatcaggtttataatgttgcatttgatgattaatatgatttcctactctgtat |
238 |
Q |
| |
|
||||||| || ||||||| || |||||||||| |||| | |||||||||| | |||| |||| ||||||| |||||||||||| ||||||| |
|
|
| T |
28889429 |
aattaggtttgatgatgattttgaagaaaatgcgtaaaattcaggtttatgacgttgtatttaatgattagtatgatttcctaatctgtat |
28889519 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 49 - 238
Target Start/End: Original strand, 28896033 - 28896223
Alignment:
| Q |
49 |
ttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatcaatttaactgtttttaaggt-aaaattgggaa |
147 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||| ||| |||||||||| |||||| ||| | |||||| |||| ||||||| ||||||||||| |
|
|
| T |
28896033 |
ttgcaattctaaggtaagggtgggatcatctttcaatagtgatattatatgatttctgaaaattaaactatttaattgttcttaaggtaaaaattgggaa |
28896132 |
T |
|
| Q |
148 |
aattagggttaatgatgaattcgaagaaaatgtgtaagaatcaggtttataatgttgcatttgatgattaatatgatttcctactctgtat |
238 |
Q |
| |
|
||||||| || ||||||| || |||||||||| |||| | |||||||||| | |||| |||| ||||||| |||||||||||| ||||||| |
|
|
| T |
28896133 |
aattaggtttgatgatgattttgaagaaaatgcgtaaaattcaggtttatgacgttgtatttaatgattagtatgatttcctaatctgtat |
28896223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 49 - 238
Target Start/End: Original strand, 28924859 - 28925049
Alignment:
| Q |
49 |
ttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatcaatttaactgtttttaaggt-aaaattgggaa |
147 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||| ||| |||||||||| |||||| ||| | |||||| |||| ||||||| ||||||||||| |
|
|
| T |
28924859 |
ttgcaattctaaggtaagggtgggatcatctttcaatagtgatattatatgatttctgaaaattaaactatttaattgttcttaaggtaaaaattgggaa |
28924958 |
T |
|
| Q |
148 |
aattagggttaatgatgaattcgaagaaaatgtgtaagaatcaggtttataatgttgcatttgatgattaatatgatttcctactctgtat |
238 |
Q |
| |
|
||||||| || ||||||| || |||||||||| |||| | |||||||||| | |||| |||| ||||||| |||||||||||| ||||||| |
|
|
| T |
28924959 |
aattaggtttgatgatgattttgaagaaaatgcgtaaaattcaggtttatgacgttgtatttaatgattagtatgatttcctaatctgtat |
28925049 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 49 - 224
Target Start/End: Complemental strand, 20820279 - 20820105
Alignment:
| Q |
49 |
ttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatcaatttaactgtttttaaggtaaaattgggaaa |
148 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||| |||||||| |||| ||| | ||| |||| ||| ||| ||||||||||||||| ||| |
|
|
| T |
20820279 |
ttgcaattctaaggtaagggtgggatcatctttcaatagtgttaatatataatttctgatgattaagtaattcaaccgttcttaaggtaaaattgg-aaa |
20820181 |
T |
|
| Q |
149 |
attagggttaatgatgaattcgaagaaaatgtgtaagaatcaggtttataatgttgcatttgatgattaatatgat |
224 |
Q |
| |
|
||||||||||||||||| || ||||| |||| ||||| ||||||||||||||||| |||||||||| | |||||| |
|
|
| T |
20820180 |
attagggttaatgatgattttgaagagaatgcataagattcaggtttataatgttgtatttgatgatgagtatgat |
20820105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 49 - 224
Target Start/End: Complemental strand, 20827379 - 20827205
Alignment:
| Q |
49 |
ttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatcaatttaactgtttttaaggtaaaattgggaaa |
148 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||| |||||||| |||| ||| | ||| |||| ||| ||| ||||||||||||||| ||| |
|
|
| T |
20827379 |
ttgcaattctaaggtaagggtgggatcatctttcaatagtgttaatatataatttctgatgattaagtaattcaaccgttcttaaggtaaaattgg-aaa |
20827281 |
T |
|
| Q |
149 |
attagggttaatgatgaattcgaagaaaatgtgtaagaatcaggtttataatgttgcatttgatgattaatatgat |
224 |
Q |
| |
|
||||||||||||||||| || ||||| |||| ||||| ||||||||||||||||| |||||||||| | |||||| |
|
|
| T |
20827280 |
attagggttaatgatgattttgaagagaatgcataagattcaggtttataatgttgtatttgatgatgagtatgat |
20827205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 127 - 238
Target Start/End: Original strand, 28931049 - 28931163
Alignment:
| Q |
127 |
tttttaaggtaaaa--ttgggaaaattagggttaatgatgaattc-gaagaaaatgtgtaagaatcaggtttataatgttgcatttgatgattaatatga |
223 |
Q |
| |
|
|||||||||||||| |||||||||||||| || |||||| || |||||||||| |||| | |||||||||| | |||| |||| ||||||| ||||| |
|
|
| T |
28931049 |
tttttaaggtaaaaaattgggaaaattaggtttgatgatggtttttgaagaaaatgggtaaaattcaggtttatgacgttgtatttaatgattagtatga |
28931148 |
T |
|
| Q |
224 |
tttcctactctgtat |
238 |
Q |
| |
|
||||||| ||||||| |
|
|
| T |
28931149 |
tttcctaatctgtat |
28931163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 86
Target Start/End: Complemental strand, 34830146 - 34830110
Alignment:
| Q |
50 |
tgcaattctaaggtaagggtgggattatctttcaata |
86 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34830146 |
tgcaattctaaggtaagggtgggattatctttcaata |
34830110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 150; Significance: 2e-79; HSPs: 15)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 41 - 245
Target Start/End: Original strand, 9099055 - 9099260
Alignment:
| Q |
41 |
ctttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagt-aatcaatttaactgtttttaaggtaaa |
139 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||| |||||||||| |
|
|
| T |
9099055 |
ctttatctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttctgaaaaattaatcaatttaactgttcttaaggtaaa |
9099154 |
T |
|
| Q |
140 |
attgggaaaattagggttaatgatgaattcgaagaaaatgtgtaagaatcaggtttataatgttgcatttgatgattaatatgatttcctactctgtatt |
239 |
Q |
| |
|
||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||| |||| |
|
|
| T |
9099155 |
attgggaaatttagggttaatgatgattctgaagaaaatgtgtaagaatcaggtttataatgttgtatttgatgattagtatgatttcctaatctatatt |
9099254 |
T |
|
| Q |
240 |
gttgat |
245 |
Q |
| |
|
|||||| |
|
|
| T |
9099255 |
gttgat |
9099260 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 42 - 247
Target Start/End: Original strand, 21364467 - 21364670
Alignment:
| Q |
42 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatcaatttaactgtttttaaggtaaaat |
141 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||| |||| || | |||||||||||||| |||||| ||| ||||||||||| ||||| |||||||| |
|
|
| T |
21364467 |
tttgtctttgcaattcaaaggtaagggtgggattatccttcagtaatgataatatatgatttctgaaaattaagcaatttaactg-ttttatggtaaaat |
21364565 |
T |
|
| Q |
142 |
tgggaaaattagggttaatgatgaattcgaagaaaatgtgtaagaatcaggtttataatgttgcatttgatgattaatatgatttcctactctgtattgt |
241 |
Q |
| |
|
|||| ||||||||||||||| || ||||||||| ||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
21364566 |
tggg-aaattagggttaatggcatttttgaagaaaatatgtaagacttaggtttataatgttgtatttgatgattaatatgatttcctactctgtattgt |
21364664 |
T |
|
| Q |
242 |
tgatgt |
247 |
Q |
| |
|
|||||| |
|
|
| T |
21364665 |
tgatgt |
21364670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 42 - 247
Target Start/End: Original strand, 23968449 - 23968652
Alignment:
| Q |
42 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatcaatttaactgtttttaaggtaaaat |
141 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||| |||| || | |||||||||||||| |||||| ||| ||||||||||| ||||| |||||||| |
|
|
| T |
23968449 |
tttgtctttgcaattcaaaggtaagggtgggattatccttcagtaatgataatatatgatttctgaaaattaagcaatttaactg-ttttatggtaaaat |
23968547 |
T |
|
| Q |
142 |
tgggaaaattagggttaatgatgaattcgaagaaaatgtgtaagaatcaggtttataatgttgcatttgatgattaatatgatttcctactctgtattgt |
241 |
Q |
| |
|
|||| ||||||||||||||| || ||||||||| ||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
23968548 |
tggg-aaattagggttaatggcatttttgaagaaaatatgtaagacttaggtttataatgttgtatttgatgattaatatgatttcctactctgtattgt |
23968646 |
T |
|
| Q |
242 |
tgatgt |
247 |
Q |
| |
|
|||||| |
|
|
| T |
23968647 |
tgatgt |
23968652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 42 - 246
Target Start/End: Original strand, 20007931 - 20008138
Alignment:
| Q |
42 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttg-aaaagtaatcaatttaactgtttttaaggtaaaa |
140 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||| || |||| ||||||||| ||||||| ||||||||||| |
|
|
| T |
20007931 |
tttgtctttgcaattctaaggtaagggtgggatcatctttcaatagtcataatatataatttatgaaaaattaatcaattgaactgttcttaaggtaaaa |
20008030 |
T |
|
| Q |
141 |
ttgggaaaattagggttaatgatgaattcg-aagaaaatgtgtaagaatcaggtttataatgttgca-tttgatgattaatatgatttcctactctgtat |
238 |
Q |
| |
|
|||||||| |||||||||| ||||| || | ||||||| || |||| |||||||||||| ||||| | ||||||| ||| |||| |||| || ||| ||| |
|
|
| T |
20008031 |
ttgggaaatttagggttaaggatgattttgaaagaaaaggtataaggatcaggtttatattgttgtactttgatgtttagtatgttttcttaatctatat |
20008130 |
T |
|
| Q |
239 |
tgttgatg |
246 |
Q |
| |
|
|||||||| |
|
|
| T |
20008131 |
tgttgatg |
20008138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 15458593 - 15458492
Alignment:
| Q |
9 |
gagatgaactagagaatcgatcgctgtgttttctttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaa |
108 |
Q |
| |
|
|||| |||||||||||||||| | || | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||| |
|
|
| T |
15458593 |
gagaagaactagagaatcgattgttgagctttctttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatatataatttctgaa |
15458494 |
T |
|
| Q |
109 |
aa |
110 |
Q |
| |
|
|| |
|
|
| T |
15458493 |
aa |
15458492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 15465188 - 15465087
Alignment:
| Q |
9 |
gagatgaactagagaatcgatcgctgtgttttctttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaa |
108 |
Q |
| |
|
|||| |||||||||||||||| | || | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||| |
|
|
| T |
15465188 |
gagaagaactagagaatcgattgttgagctttctttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatatataatttctgaa |
15465089 |
T |
|
| Q |
109 |
aa |
110 |
Q |
| |
|
|| |
|
|
| T |
15465088 |
aa |
15465087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 31252509 - 31252419
Alignment:
| Q |
26 |
cgatcgctgtgttttctttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatc |
116 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||| |||| |||||| ||||| |
|
|
| T |
31252509 |
cgattgctgtgttttctttgtctttgcaattctaaggtaagggtgagattatcttttaatgattataatatataatttctgaaaattaatc |
31252419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 34639938 - 34640015
Alignment:
| Q |
9 |
gagatgaactagagaatcgatcgctgtgttttctttgtctttgcaattctaaggtaagggtgggattatctttcaata |
86 |
Q |
| |
|
|||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| || ||||| |||||| |
|
|
| T |
34639938 |
gagaagaactagagaatcgattgctgtgttttctttgtcttcgcaattctaaggtaagggtgagactatctctcaata |
34640015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 34646612 - 34646689
Alignment:
| Q |
9 |
gagatgaactagagaatcgatcgctgtgttttctttgtctttgcaattctaaggtaagggtgggattatctttcaata |
86 |
Q |
| |
|
|||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| || ||||| |||||| |
|
|
| T |
34646612 |
gagaagaactagagaatcgattgctgtgttttctttgtcttcgcaattctaaggtaagggtgagactatctctcaata |
34646689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 24563541 - 24563475
Alignment:
| Q |
9 |
gagatgaactagagaatcgatcgctgtgttttctttgtctttgcaattctaaggtaagggtgggatt |
75 |
Q |
| |
|
|||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
24563541 |
gagaagaactagggaatcgattgctgtgttttctttgtctttgcaattctaaggtaagggtgagatt |
24563475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 24641635 - 24641696
Alignment:
| Q |
9 |
gagatgaactagagaatcgatcgctgtgttttctttgtctttgcaattctaaggtaagggtg |
70 |
Q |
| |
|
|||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
24641635 |
gagaagaactagagaatcgattgctgtgttttctttgtcttcgcaattctaaggtaagggtg |
24641696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 11288653 - 11288721
Alignment:
| Q |
42 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaa |
110 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||| | |||||||| |||| |||||| |
|
|
| T |
11288653 |
tttgtcttggcaattctaaggtaagggtgggattatctttcaatgatcttaatatataatttctgaaaa |
11288721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 245
Target Start/End: Complemental strand, 29097789 - 29097732
Alignment:
| Q |
188 |
tcaggtttataatgttgcatttgatgattaatatgatttcctactctgtattgttgat |
245 |
Q |
| |
|
||||||||||| ||||| |||||||||||| |||||||||||| ||| || ||||||| |
|
|
| T |
29097789 |
tcaggtttatactgttgtatttgatgattagtatgatttcctaatctataatgttgat |
29097732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 85
Target Start/End: Original strand, 28288494 - 28288537
Alignment:
| Q |
42 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaat |
85 |
Q |
| |
|
||||||||||||||||||||||||||||| || ||||| ||||| |
|
|
| T |
28288494 |
tttgtctttgcaattctaaggtaagggtgagactatctctcaat |
28288537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 10986173 - 10986226
Alignment:
| Q |
50 |
tgcaattctaaggtaagggtgggattatctttcaatagttataatatatgattt |
103 |
Q |
| |
|
||||||||||||||||||||| || |||||||||||| | ||||| ||| |||| |
|
|
| T |
10986173 |
tgcaattctaaggtaagggtgagactatctttcaataatcataatctataattt |
10986226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 150; Significance: 2e-79; HSPs: 12)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 41 - 245
Target Start/End: Original strand, 19235052 - 19235257
Alignment:
| Q |
41 |
ctttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagt-aatcaatttaactgtttttaaggtaaa |
139 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||| |||||||||| |
|
|
| T |
19235052 |
ctttatctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttctgaaaaattaatcaatttaactgttcttaaggtaaa |
19235151 |
T |
|
| Q |
140 |
attgggaaaattagggttaatgatgaattcgaagaaaatgtgtaagaatcaggtttataatgttgcatttgatgattaatatgatttcctactctgtatt |
239 |
Q |
| |
|
||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||| |||| |
|
|
| T |
19235152 |
attgggaaatttagggttaatgatgattctgaagaaaatgtgtaagaatcaggtttataatgttgtatttgatgattagtatgatttcctaatctatatt |
19235251 |
T |
|
| Q |
240 |
gttgat |
245 |
Q |
| |
|
|||||| |
|
|
| T |
19235252 |
gttgat |
19235257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 42 - 247
Target Start/End: Original strand, 12033429 - 12033636
Alignment:
| Q |
42 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatcaatttaactgtttttaaggtaaaat |
141 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||| ||||||||| ||||||| |||||||||||| |
|
|
| T |
12033429 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaat |
12033528 |
T |
|
| Q |
142 |
tgggaaaattagggttaatgatgaattcg-aagaaaatgtgtaagaatcaggtttataatgttgca-tttgatgattaatatgatttcctactctgtatt |
239 |
Q |
| |
|
||||||| | |||||||||||||| || | ||||||| || ||||||||||||||||||||||| | ||||||| ||| ||||||||| || ||| | || |
|
|
| T |
12033529 |
tgggaaattaagggttaatgatgattttgaaagaaaaggtataagaatcaggtttataatgttgtactttgatgtttagtatgatttcttaatctatgtt |
12033628 |
T |
|
| Q |
240 |
gttgatgt |
247 |
Q |
| |
|
|||||||| |
|
|
| T |
12033629 |
gttgatgt |
12033636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 42 - 247
Target Start/End: Complemental strand, 17131802 - 17131595
Alignment:
| Q |
42 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatcaatttaactgtttttaaggtaaaat |
141 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||| ||||||||| ||||||| |||||||||||| |
|
|
| T |
17131802 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaat |
17131703 |
T |
|
| Q |
142 |
tgggaaaattagggttaatgatgaattcg-aagaaaatgtgtaagaatcaggtttataatgttgca-tttgatgattaatatgatttcctactctgtatt |
239 |
Q |
| |
|
||||||| |||||||||| ||||| || | ||||||| || |||| |||||||||||||||||| | ||||||| ||| ||||||||| || ||| | || |
|
|
| T |
17131702 |
tgggaaatttagggttaaggatgattttgaaagaaaaggtataaggatcaggtttataatgttgtactttgatgtttagtatgatttcttaatctatgtt |
17131603 |
T |
|
| Q |
240 |
gttgatgt |
247 |
Q |
| |
|
|||||||| |
|
|
| T |
17131602 |
gttgatgt |
17131595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 42 - 227
Target Start/End: Complemental strand, 14865916 - 14865729
Alignment:
| Q |
42 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatcaatttaactgtttttaaggtaaaat |
141 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||| |||||| ||||||||| ||||||| |||||||||||| |
|
|
| T |
14865916 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaaattaatcaattaaactgttcttaaggtaaaat |
14865817 |
T |
|
| Q |
142 |
tgggaaaattagggttaatgatgaattcg-aagaaaatgtgtaagaatcaggtttataatgttgca-tttgatgattaatatgatttc |
227 |
Q |
| |
|
||||||||| | |||||||||||| || | ||||||| ||||||||| |||||||||||||||| | || |||||||| ||||||||| |
|
|
| T |
14865816 |
tgggaaaataatggttaatgatgattttgaaagaaaaggtgtaagaagcaggtttataatgttgtacttggatgattagtatgatttc |
14865729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 120
Target Start/End: Complemental strand, 51301692 - 51301581
Alignment:
| Q |
9 |
gagatgaactagagaatcgatcgctgtgttttctttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaa |
108 |
Q |
| |
|
|||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||| | ||||||| | |||| |||| |
|
|
| T |
51301692 |
gagaagaactagagaatcgattgctgtgttttctttgtcttcgcaattctaaggtaagggtgagattatcttccaataatcataatatgtaatttctgaa |
51301593 |
T |
|
| Q |
109 |
aagtaatcaatt |
120 |
Q |
| |
|
|| ||||||||| |
|
|
| T |
51301592 |
aattaatcaatt |
51301581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 9 - 116
Target Start/End: Original strand, 10389395 - 10389502
Alignment:
| Q |
9 |
gagatgaactagagaatcgatcgctgtgttttctttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaa |
108 |
Q |
| |
|
|||| |||||||| ||||||| | || | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||| |||| |
|
|
| T |
10389395 |
gagaagaactagaaaatcgattgttgagctttctttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaa |
10389494 |
T |
|
| Q |
109 |
aagtaatc |
116 |
Q |
| |
|
|||||||| |
|
|
| T |
10389495 |
aagtaatc |
10389502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 9 - 116
Target Start/End: Original strand, 10414484 - 10414591
Alignment:
| Q |
9 |
gagatgaactagagaatcgatcgctgtgttttctttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaa |
108 |
Q |
| |
|
|||| |||||||| ||||||| | || | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||| |||| |
|
|
| T |
10414484 |
gagaagaactagaaaatcgattgttgagctttctttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaa |
10414583 |
T |
|
| Q |
109 |
aagtaatc |
116 |
Q |
| |
|
|||||||| |
|
|
| T |
10414584 |
aagtaatc |
10414591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 9 - 116
Target Start/End: Original strand, 10421154 - 10421261
Alignment:
| Q |
9 |
gagatgaactagagaatcgatcgctgtgttttctttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaa |
108 |
Q |
| |
|
|||| |||||||| ||||||| | || | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||| |||| |
|
|
| T |
10421154 |
gagaagaactagaaaatcgattgttgagctttctttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaa |
10421253 |
T |
|
| Q |
109 |
aagtaatc |
116 |
Q |
| |
|
|||||||| |
|
|
| T |
10421254 |
aagtaatc |
10421261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 118
Target Start/End: Original strand, 13312891 - 13312957
Alignment:
| Q |
52 |
caattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatcaa |
118 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||| | ||||||| | ||||||||||| ||||||| |
|
|
| T |
13312891 |
caattctaaggtaagggtgagattatctttcaataatcataatatgtaatttttgaaaattaatcaa |
13312957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 172
Target Start/End: Original strand, 13323782 - 13323903
Alignment:
| Q |
52 |
caattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatcaattta-actgtt-tttaaggtaaaattgggaaaa |
149 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||| | ||||||| | |||| |||||| ||||||| ||| | |||| || ||| |||||||||| || |
|
|
| T |
13323782 |
caattctaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaattaatcaaattagattgttcttgaagataaaattggg-aat |
13323880 |
T |
|
| Q |
150 |
ttagggttaatgatgaattcgaa |
172 |
Q |
| |
|
|||||||| ||||||| |||||| |
|
|
| T |
13323881 |
ttagggttgatgatgacttcgaa |
13323903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 118
Target Start/End: Original strand, 13302235 - 13302301
Alignment:
| Q |
52 |
caattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatcaa |
118 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||| | ||||||| | |||| |||||| ||||||| |
|
|
| T |
13302235 |
caattctaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaattaatcaa |
13302301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 23370490 - 23370558
Alignment:
| Q |
42 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaa |
110 |
Q |
| |
|
||||||| | |||||||||||||||||||||| ||||| |||||| | ||||| ||| |||| |||||| |
|
|
| T |
23370490 |
tttgtctatacaattctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaa |
23370558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1469 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold1469
Description:
Target: scaffold1469; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 14 - 243
Target Start/End: Complemental strand, 1453 - 1224
Alignment:
| Q |
14 |
gaactagagaatcgatcgctgtgttttctttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagta |
113 |
Q |
| |
|
|||||||||||||||| | || | |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||| |||||| || |
|
|
| T |
1453 |
gaactagagaatcgattgttgagctttctttgtctttgcaattctaaggtaagggtgggatttcctttcaatagtgttaatatatgctttctgaaaatta |
1354 |
T |
|
| Q |
114 |
atcaatttaactgtttttaaggtaaaattgggaaaattagggttaatgatgaattcgaagaaaatgtgtaagaatcaggtttataatgttgcatttgatg |
213 |
Q |
| |
|
| ||||||||||||| ||||||||||||||||||||||||| ||||||||| || |||||||||| |||||| ||||||||| |||||| | |||||| |
|
|
| T |
1353 |
aacaatttaactgttcttaaggtaaaattgggaaaattaggtctaatgatgattttgaagaaaatgcgtaagattcaggtttacaatgttataattgatg |
1254 |
T |
|
| Q |
214 |
attaatatgatttcctactctgtattgttg |
243 |
Q |
| |
|
|||| |||||||||||| |||||||||||| |
|
|
| T |
1253 |
attagtatgatttcctaatctgtattgttg |
1224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 123; Significance: 3e-63; HSPs: 10)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 41 - 247
Target Start/End: Complemental strand, 2465432 - 2465226
Alignment:
| Q |
41 |
ctttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatcaatttaactgtttttaaggtaaaa |
140 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| ||| ||||||| | |||||||||||||| |||||| ||| ||||||||||||||||| ||||||| |
|
|
| T |
2465432 |
ctttatctttgcaattctaaggtaagggtgggatcatccttcaataatgataatatatgatttctgaaaattaagcaatttaactgtttttatggtaaaa |
2465333 |
T |
|
| Q |
141 |
ttgggaaaattagggttaatgatgaattcgaagaaaatgtgtaagaatcaggtttataatgttgcatttgatgattaatatgatttcctactctgtattg |
240 |
Q |
| |
|
| || ||||||||||||||| | || ||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
2465332 |
attgggaaattagggttaatggcaattttgaagaaaatgtgtaagatttaggtttataatgttatatttgatgattaatatgatttcctactctgtattg |
2465233 |
T |
|
| Q |
241 |
ttgatgt |
247 |
Q |
| |
|
||||||| |
|
|
| T |
2465232 |
ttgatgt |
2465226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 49 - 247
Target Start/End: Original strand, 3857357 - 3857556
Alignment:
| Q |
49 |
ttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatcaatttaactgtttttaaggtaaaa---ttggg |
145 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| ||||| | |||||||||||||| |||||| ||| ||||||||||||||||| ||||||| ||||| |
|
|
| T |
3857357 |
ttgcaattctaaggtaagggtgggatcatctt-caataatgataatatatgatttctgaaaattaagcaatttaactgtttttatggtaaaaaaattggg |
3857455 |
T |
|
| Q |
146 |
aaaattagggttaatgatgaattcgaagaaaatgtgtaagaatcaggtttataatgttgcatttgatgattaatatgatttcctactctgtattgttgat |
245 |
Q |
| |
|
||| |||||||||||| | || ||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3857456 |
aaa-ttagggttaatggcaattttgaagaaaatgtgtaagatttaggtttataatgttgtatttgatgattaatatgatttcctactctgtattgttgat |
3857554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 42 - 227
Target Start/End: Complemental strand, 16091145 - 16090958
Alignment:
| Q |
42 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatcaatttaactgtttttaaggtaaaat |
141 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||| ||||| ||||||||| ||||||| ||||||||||| |
|
|
| T |
16091145 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaagttaatcaattaaactgttcctaaggtaaaat |
16091046 |
T |
|
| Q |
142 |
tgggaaaattagggttaatgatgaattcg-aagaaaatgtgtaagaatcaggtttataatgttgcatttg-atgattaatatgatttc |
227 |
Q |
| |
|
||||||||| |||||||||||||| || | ||||||| |||||||||||||||||||||||||| ||||| ||||||| ||||||||| |
|
|
| T |
16091045 |
tgggaaaataagggttaatgatgattttgaaagaaaaggtgtaagaatcaggtttataatgttgtatttgaatgattagtatgatttc |
16090958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 42 - 227
Target Start/End: Original strand, 29181094 - 29181281
Alignment:
| Q |
42 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatcaatttaactgtttttaaggtaaaat |
141 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||| |||||| ||||||||| |||| || |||||||||||| |
|
|
| T |
29181094 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaaattaatcaattaaactattcttaaggtaaaat |
29181193 |
T |
|
| Q |
142 |
tgggaaaattagggttaatgatgaattcg-aagaaaatgtgtaagaatcaggtttataatgttgcatttg-atgattaatatgatttc |
227 |
Q |
| |
|
| ||||||| |||||||||||||| || | ||||||| |||||||||||||| ||||||||||| ||||| ||||||| ||||||||| |
|
|
| T |
29181194 |
ttggaaaataagggttaatgatgattttgaaagaaaaggtgtaagaatcaggcttataatgttgtatttgaatgattagtatgatttc |
29181281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 42 - 247
Target Start/End: Original strand, 20906446 - 20906652
Alignment:
| Q |
42 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatcaatttaactgtttttaaggtaaaat |
141 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||| ||||||||| |||| || |||||||||||| |
|
|
| T |
20906446 |
tttgtccttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactattcttaaggtaaaat |
20906545 |
T |
|
| Q |
142 |
tgggaaaattagggttaatgatgaattcg-aagaaaatgtgtaagaatcaggtttataatgttgca-tttgatgattaatatgatttcctactctgtatt |
239 |
Q |
| |
|
|||| || | |||||||||||||| || | ||||||| || ||||||||| ||||||||||||| | ||||||| ||| ||||||||| || ||| | || |
|
|
| T |
20906546 |
tggg-aattaagggttaatgatgattttgaaagaaaaggtataagaatcaagtttataatgttgtactttgatgtttagtatgatttcttaatctatgtt |
20906644 |
T |
|
| Q |
240 |
gttgatgt |
247 |
Q |
| |
|
|||||||| |
|
|
| T |
20906645 |
gttgatgt |
20906652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 42 - 157
Target Start/End: Complemental strand, 2971324 - 2971209
Alignment:
| Q |
42 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatcaatttaactgtttttaaggtaaaat |
141 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||| |||||| ||||||||| ||||||| |||||||||||| |
|
|
| T |
2971324 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatttataatttctgaaaattaatcaattgaactgttcttaaggtaaaat |
2971225 |
T |
|
| Q |
142 |
tgggaaaattagggtt |
157 |
Q |
| |
|
|||||| || |||||| |
|
|
| T |
2971224 |
tgggaagataagggtt |
2971209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 31155497 - 31155396
Alignment:
| Q |
9 |
gagatgaactagagaatcgatcgctgtgttttctttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaa |
108 |
Q |
| |
|
|||| |||||||||||||||| | || | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||| |
|
|
| T |
31155497 |
gagaagaactagagaatcgattgttgagctttctttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatatataatttctgaa |
31155398 |
T |
|
| Q |
109 |
aa |
110 |
Q |
| |
|
|| |
|
|
| T |
31155397 |
aa |
31155396 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 14319614 - 14319688
Alignment:
| Q |
42 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatc |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| || |||| ||| |||| |||||| ||||| |
|
|
| T |
14319614 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatgattttaatgtataatttctgaaaattaatc |
14319688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 85
Target Start/End: Complemental strand, 14230851 - 14230808
Alignment:
| Q |
42 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaat |
85 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14230851 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaat |
14230808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 171 - 227
Target Start/End: Complemental strand, 2966905 - 2966848
Alignment:
| Q |
171 |
aagaaaatgtgtaagaatcaggtttataatgttgca-tttgatgattaatatgatttc |
227 |
Q |
| |
|
||||||| || |||||||||||||| |||||||| | ||||||||||| ||||||||| |
|
|
| T |
2966905 |
aagaaaaggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttc |
2966848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0053 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0053
Description:
Target: scaffold0053; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 42 - 227
Target Start/End: Original strand, 79475 - 79662
Alignment:
| Q |
42 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatcaatttaactgtttttaaggtaaaat |
141 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||| |||||| ||||||||| ||||||| |||||||||||| |
|
|
| T |
79475 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaaattaatcaattaaactgttcttaaggtaaaat |
79574 |
T |
|
| Q |
142 |
tgggaaaattagggttaatgatgaattcg-aagaaaatgtgtaagaatcaggtttataatgttgcatttg-atgattaatatgatttc |
227 |
Q |
| |
|
||||||||| |||||||||||||| || | ||||||| |||||||||||||||||||||||||| ||||| ||||||| ||||||||| |
|
|
| T |
79575 |
tgggaaaataagggttaatgatgattttgaaagaaaaggtgtaagaatcaggtttataatgttgtatttgaatgattagtatgatttc |
79662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029 (Bit Score: 120; Significance: 2e-61; HSPs: 2)
Name: scaffold0029
Description:
Target: scaffold0029; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 41 - 247
Target Start/End: Original strand, 91186 - 91394
Alignment:
| Q |
41 |
ctttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatcaatttaactgtttttaaggt---a |
137 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||| |||||| ||| ||||||||||||||||| ||| | |
|
|
| T |
91186 |
ctttatctttgcaattctaaggtaagggtgggatcatctttcaataatgataatatatgatttctgaaaattaagcaatttaactgtttttatggtaaaa |
91285 |
T |
|
| Q |
138 |
aaattgggaaaattagggttaatgatgaattcgaagaaaatgtgtaagaatcaggtttataatgttgcatttgatgattaatatgatttcctactctgta |
237 |
Q |
| |
|
|||||||| ||||||||||||||| | || ||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
91286 |
aaattggg-aaattagggttaatggcaattttgaagaaaatgtgtaagatttaggtttataatgttgtatttgatgattaatatgatttcctactctgta |
91384 |
T |
|
| Q |
238 |
ttgttgatgt |
247 |
Q |
| |
|
||| |||||| |
|
|
| T |
91385 |
ttggtgatgt |
91394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 41 - 247
Target Start/End: Original strand, 96912 - 97120
Alignment:
| Q |
41 |
ctttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatcaatttaactgtttttaaggt---a |
137 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||| |||||| ||| ||||||||||||||||| ||| | |
|
|
| T |
96912 |
ctttatctttgcaattctaaggtaagggtgggatcatctttcaataatgataatatatgatttctgaaaattaagcaatttaactgtttttatggtaaaa |
97011 |
T |
|
| Q |
138 |
aaattgggaaaattagggttaatgatgaattcgaagaaaatgtgtaagaatcaggtttataatgttgcatttgatgattaatatgatttcctactctgta |
237 |
Q |
| |
|
|||||||| ||||||||||||||| | || ||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
97012 |
aaattggg-aaattagggttaatggcaattttgaagaaaatgtgtaagatttaggtttataatgttgtatttgatgattaatatgatttcctactctgta |
97110 |
T |
|
| Q |
238 |
ttgttgatgt |
247 |
Q |
| |
|
||| |||||| |
|
|
| T |
97111 |
ttggtgatgt |
97120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 116; Significance: 4e-59; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 42 - 227
Target Start/End: Original strand, 16146815 - 16147002
Alignment:
| Q |
42 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatcaatttaactgtttttaaggtaaaat |
141 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||| |||||| ||||||||| ||||||| |||||||||||| |
|
|
| T |
16146815 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaaattaatcaattaaactgttcttaaggtaaaat |
16146914 |
T |
|
| Q |
142 |
tgggaaaattagggttaatgatgaattcg-aagaaaatgtgtaagaatcaggtttataatgttgcatttg-atgattaatatgatttc |
227 |
Q |
| |
|
| ||||||| |||||||||||||| || | ||||||| |||||||||||||||||||||||||| ||||| ||||||| ||||||||| |
|
|
| T |
16146915 |
ttggaaaataagggttaatgatgattttgaaagaaaaggtgtaagaatcaggtttataatgttgtatttgaatgattagtatgatttc |
16147002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 53483808 - 53483731
Alignment:
| Q |
9 |
gagatgaactagagaatcgatcgctgtgttttctttgtctttgcaattctaaggtaagggtgggattatctttcaata |
86 |
Q |
| |
|
|||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| || ||||| |||||| |
|
|
| T |
53483808 |
gagaagaactagagaatcgattgctgtgttttctttgtcttcgcaattctaaggtaagggtgagactatctctcaata |
53483731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 115
Target Start/End: Complemental strand, 27906328 - 27906263
Alignment:
| Q |
50 |
tgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaat |
115 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||| | ||||| ||| |||| |||||| |||| |
|
|
| T |
27906328 |
tgcaattctaagataagggtgggattatctttcaatgatcataatgtataatttctgaaaattaat |
27906263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0384 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0384
Description:
Target: scaffold0384; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 52 - 242
Target Start/End: Original strand, 16059 - 16249
Alignment:
| Q |
52 |
caattctaaggtaagggtgggattatctttcaatagttataatatatgatttttg-aaaagtaatcaatttaactgtttttaaggtaaaattgggaaaat |
150 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||| ||||| | || || | |
|
|
| T |
16059 |
caattctaaggtaagggtgggattatctttcaatagttataatatatgatttctgaaaaattaatcaatttaactgtttttaagataaaaattgg-aatt |
16157 |
T |
|
| Q |
151 |
tagggttaatgatgaattcgaagaaaatgtgtaagaatcaggtttataatgttgcatttgatgattaatatgatttcctactctgtattgtt |
242 |
Q |
| |
|
||||||||||||||| || |||||||||||| |||||||||||| || |||||| |||||||||||| |||||||| ||| ||| ||||||| |
|
|
| T |
16158 |
tagggttaatgatgattttgaagaaaatgtgcaagaatcaggttcatgatgttgtatttgatgattagtatgattttctaatctatattgtt |
16249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0131 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0131
Description:
Target: scaffold0131; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 42 - 217
Target Start/End: Complemental strand, 1067 - 892
Alignment:
| Q |
42 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatcaatttaactgtttttaaggtaaaat |
141 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||| |||||| ||| ||||||||||||| ||| |||||||| |
|
|
| T |
1067 |
tttgtctttgcaattctaaggtaagggtgggatcatctctcaatagtgataatatatgatttctgaaaattaagcaatttaactgttcttatggtaaaat |
968 |
T |
|
| Q |
142 |
tgggaaaattagggttaatgatgaattcgaagaaaatgtgtaagaatcaggtttataatgttgcatttgatgatta |
217 |
Q |
| |
|
|||||||||||||||||||| || || ||||||||||||||||| | |||||||||| |||| ||||||||||| |
|
|
| T |
967 |
tgggaaaattagggttaatggcgattttgaagaaaatgtgtaagatttaggtttataaagttgtgtttgatgatta |
892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 107; Significance: 1e-53; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 42 - 246
Target Start/End: Original strand, 20851117 - 20851323
Alignment:
| Q |
42 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatcaatttaactgtttttaaggtaaaat |
141 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||| ||||||||| ||||||| |||||||||||| |
|
|
| T |
20851117 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaat |
20851216 |
T |
|
| Q |
142 |
tgggaaaattagggttaatgatgaattcg-aagaaaatgtgtaagaatcaggtttataatgttgca-tttgatgattaatatgatttcctactctgtatt |
239 |
Q |
| |
|
||||||| |||||||||| ||||| || | ||||||| || |||| |||||||||||| ||||| | ||||||| ||| ||||||||| || ||| | || |
|
|
| T |
20851217 |
tgggaaatttagggttaaggatgattttgaaagaaaaggtataaggatcaggtttatattgttgtactttgatgtttagtatgatttcttaatctatgtt |
20851316 |
T |
|
| Q |
240 |
gttgatg |
246 |
Q |
| |
|
||||||| |
|
|
| T |
20851317 |
gttgatg |
20851323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 42 - 246
Target Start/End: Original strand, 20857744 - 20857950
Alignment:
| Q |
42 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatcaatttaactgtttttaaggtaaaat |
141 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||| ||||||||| ||||||| |||||||||||| |
|
|
| T |
20857744 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaat |
20857843 |
T |
|
| Q |
142 |
tgggaaaattagggttaatgatgaattcg-aagaaaatgtgtaagaatcaggtttataatgttgca-tttgatgattaatatgatttcctactctgtatt |
239 |
Q |
| |
|
||||||| |||||||||| ||||| || | ||||||| || |||| |||||||||||| ||||| | ||||||| ||| |||| |||| || ||| | || |
|
|
| T |
20857844 |
tgggaaatttagggttaaggatgattttgaaagaaaaggtataaggatcaggtttatattgttgtactttgatgtttagtatgttttcttaatctatgtt |
20857943 |
T |
|
| Q |
240 |
gttgatg |
246 |
Q |
| |
|
||||||| |
|
|
| T |
20857944 |
gttgatg |
20857950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 42 - 246
Target Start/End: Complemental strand, 21706346 - 21706140
Alignment:
| Q |
42 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatcaatttaactgtttttaaggtaaaat |
141 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||| ||||||||| ||||||| |||||||||||| |
|
|
| T |
21706346 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaat |
21706247 |
T |
|
| Q |
142 |
tgggaaaattagggttaatgatgaattcg-aagaaaatgtgtaagaatcaggtttataatgttgca-tttgatgattaatatgatttcctactctgtatt |
239 |
Q |
| |
|
||||||| |||||||||| ||||| || | ||||||| || |||| |||||||||||| ||||| | ||||||| ||| |||| |||| || ||| | || |
|
|
| T |
21706246 |
tgggaaatttagggttaaggatgattttgaaagaaaaggtataaggatcaggtttatattgttgtactttgatgtttagtatgttttcttaatctatgtt |
21706147 |
T |
|
| Q |
240 |
gttgatg |
246 |
Q |
| |
|
||||||| |
|
|
| T |
21706146 |
gttgatg |
21706140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 42 - 247
Target Start/End: Complemental strand, 21710888 - 21710682
Alignment:
| Q |
42 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatcaatttaactgtttttaaggtaaaat |
141 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||| ||||||||| ||||||| |||||||||||| |
|
|
| T |
21710888 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaat |
21710789 |
T |
|
| Q |
142 |
tgggaaaattagggttaatgatgaattcg-aagaaaatgtgtaagaatcaggtttataatgttgcatttgatgattaatatgatttcctactctgtattg |
240 |
Q |
| |
|
||||||| |||||||| | ||||| || | ||||||| || |||| ||||||||||||||||| | |||||| ||| ||||||| | || ||| | ||| |
|
|
| T |
21710788 |
tgggaaatttagggtttaagatgattttgaaagaaaaagtataaggatcaggtttataatgttatacttgatgtttagtatgattccttaatctatgttg |
21710689 |
T |
|
| Q |
241 |
ttgatgt |
247 |
Q |
| |
|
||||||| |
|
|
| T |
21710688 |
ttgatgt |
21710682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 85
Target Start/End: Original strand, 20044946 - 20044979
Alignment:
| Q |
52 |
caattctaaggtaagggtgggattatctttcaat |
85 |
Q |
| |
|
||||||||||||||||||||||||||| |||||| |
|
|
| T |
20044946 |
caattctaaggtaagggtgggattatccttcaat |
20044979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 103; Significance: 2e-51; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 42 - 246
Target Start/End: Original strand, 24320655 - 24320861
Alignment:
| Q |
42 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatcaatttaactgtttttaaggtaaaat |
141 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||| ||||||||| ||||||| |||||||||||| |
|
|
| T |
24320655 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaat |
24320754 |
T |
|
| Q |
142 |
tgggaaaattagggttaatgatgaattcg-aagaaaatgtgtaagaatcaggtttataatgttgca-tttgatgattaatatgatttcctactctgtatt |
239 |
Q |
| |
|
||||||| |||||||||| ||||| || | ||||||| || || | |||||||||||| ||||| | ||||||| ||| ||||||||| || ||| | || |
|
|
| T |
24320755 |
tgggaaatttagggttaaggatgattttgaaagaaaaggtatagggatcaggtttatattgttgtactttgatgtttagtatgatttcttaatctatgtt |
24320854 |
T |
|
| Q |
240 |
gttgatg |
246 |
Q |
| |
|
||||||| |
|
|
| T |
24320855 |
gttgatg |
24320861 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 44477726 - 44477625
Alignment:
| Q |
9 |
gagatgaactagagaatcgatcgctgtgttttctttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaa |
108 |
Q |
| |
|
|||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| || ||||| |||||| | ||||| ||| |||| |||| |
|
|
| T |
44477726 |
gagaagaactagagaatcgattgctgtgttttctttgtcttcacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaa |
44477627 |
T |
|
| Q |
109 |
aa |
110 |
Q |
| |
|
|| |
|
|
| T |
44477626 |
aa |
44477625 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 44492884 - 44492783
Alignment:
| Q |
9 |
gagatgaactagagaatcgatcgctgtgttttctttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaa |
108 |
Q |
| |
|
|||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| || ||||| |||||| | ||||| ||| |||| |||| |
|
|
| T |
44492884 |
gagaagaactagagaatcgattgctgtgttttctttgtcttcacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaa |
44492785 |
T |
|
| Q |
109 |
aa |
110 |
Q |
| |
|
|| |
|
|
| T |
44492784 |
aa |
44492783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 118
Target Start/End: Original strand, 29643386 - 29643446
Alignment:
| Q |
58 |
taaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatcaa |
118 |
Q |
| |
|
||||||||||||| ||||||||||||||| | ||||||| | |||| |||||| ||||||| |
|
|
| T |
29643386 |
taaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaattaatcaa |
29643446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0072 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0072
Description:
Target: scaffold0072; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 42 - 227
Target Start/End: Original strand, 49955 - 50143
Alignment:
| Q |
42 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatcaatttaactgtttttaaggt-aaaa |
140 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||| | |||| ||||||||| ||||||| ||||||| |||| |
|
|
| T |
49955 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctaaaaattaatcaattaaactgttcttaaggtaaaaa |
50054 |
T |
|
| Q |
141 |
ttgggaaaattagggttaatgatgaattcg-aagaaaatgtgtaagaatcaggtttataatgttgcatttg-atgattaatatgatttc |
227 |
Q |
| |
|
|||||||||| |||||||||||||| || | ||||||| ||||||||||||||||||||||||| ||||| | ||||| ||||||||| |
|
|
| T |
50055 |
ttgggaaaataagggttaatgatgattttgaaagaaaaggtgtaagaatcaggtttataatgttatatttgaaagattagtatgatttc |
50143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 96; Significance: 4e-47; HSPs: 8)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 42 - 247
Target Start/End: Original strand, 25180914 - 25181121
Alignment:
| Q |
42 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatcaatttaactgtttttaaggtaaaat |
141 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||| ||||||||| ||||||| |||||||||||| |
|
|
| T |
25180914 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaggtaaaat |
25181013 |
T |
|
| Q |
142 |
tgggaaaattagggttaatgatgaattcg-aagaaaatgtgtaagaatcaggtttataatgttgca-tttgatgattaatatgatttcctactctgtatt |
239 |
Q |
| |
|
||||||| |||||||||| ||||| || | ||||||| || || |||||||||||| | ||| | ||||||| ||| ||||||||| || ||| | || |
|
|
| T |
25181014 |
tgggaaatttagggttaaggatgattttgaaagaaaaggtatattgatcaggtttatatttttgtactttgatgtttagtatgatttcttaatctatgtt |
25181113 |
T |
|
| Q |
240 |
gttgatgt |
247 |
Q |
| |
|
|||||||| |
|
|
| T |
25181114 |
gttgatgt |
25181121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 42 - 246
Target Start/End: Complemental strand, 10647 - 10441
Alignment:
| Q |
42 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatcaatttaactgtttttaaggtaaaat |
141 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||| ||||||||| || |||| |||||||||||| |
|
|
| T |
10647 |
tttgtctttgaaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaattgttcttaaggtaaaat |
10548 |
T |
|
| Q |
142 |
tgggaaaattagggttaatgatgaattcg-aagaaaatgtgtaagaatcaggtttataatgttgca-tttgatgattaatatgatttcctactctgtatt |
239 |
Q |
| |
|
||||||| |||||||||| ||||| || | ||||||| || || | || ||||||||| ||||| | ||||||| ||| ||||||||| || ||| | || |
|
|
| T |
10547 |
tgggaaatttagggttaaggatgattttgaaagaaaaggtatagggataaggtttatattgttgtactttgatgtttagtatgatttcttaatctatgtt |
10448 |
T |
|
| Q |
240 |
gttgatg |
246 |
Q |
| |
|
||||||| |
|
|
| T |
10447 |
gttgatg |
10441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 5705975 - 5706045
Alignment:
| Q |
9 |
gagatgaactagagaatcgatcgctgtgttttctttgtctttgcaattctaaggtaagggtgggattatct |
79 |
Q |
| |
|
|||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| || ||||| |
|
|
| T |
5705975 |
gagaagaactagagaatcgattgctgtgttttctttgtcttcgcaattctaaggtaagggtgagactatct |
5706045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 27366500 - 27366566
Alignment:
| Q |
9 |
gagatgaactagagaatcgatcgctgtgttttctttgtctttgcaattctaaggtaagggtgggatt |
75 |
Q |
| |
|
|||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
27366500 |
gagaagaactagggaatcgattgctgtgttttctttgtctttgcaattctaaggtaagggtgagatt |
27366566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 27207704 - 27207778
Alignment:
| Q |
42 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatc |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| || |||| ||| |||| |||||| ||||| |
|
|
| T |
27207704 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatgattttaatgtataatttctgaaaattaatc |
27207778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 26885252 - 26885208
Alignment:
| Q |
42 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaata |
86 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26885252 |
tttgtctctgcaattctaaggtaagggtgggattatctttcaata |
26885208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 83
Target Start/End: Original strand, 23168291 - 23168324
Alignment:
| Q |
50 |
tgcaattctaaggtaagggtgggattatctttca |
83 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
23168291 |
tgcaattctaaggtaagggtgggattatctttca |
23168324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 83
Target Start/End: Original strand, 23579548 - 23579581
Alignment:
| Q |
50 |
tgcaattctaaggtaagggtgggattatctttca |
83 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
23579548 |
tgcaattctaaggtaagggtgggattatctttca |
23579581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0023
Description:
Target: scaffold0023; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 42 - 245
Target Start/End: Complemental strand, 135508 - 135304
Alignment:
| Q |
42 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatcaatttaactgtt-tttaaggtaaaa |
140 |
Q |
| |
|
||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||| |||| |||||| ||||||||| ||||||| || ||||||||| |
|
|
| T |
135508 |
tttgtctttgcaattctaaggtaagcgtgagattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaaggtaaaa |
135409 |
T |
|
| Q |
141 |
ttgggaaaattagggttaatgatgaattcg-aagaaaatgtgtaagaatcaggtttataatgttg-catttgatgattaatatgatttcctactctgtat |
238 |
Q |
| |
|
||| | || | |||||||||||||| || | ||||||| ||||||||||||||||||| ||||| |||||||| ||| ||||||||| || ||| | | |
|
|
| T |
135408 |
ttgag-aattaagggttaatgatgattttgaaagaaaaggtgtaagaatcaggtttattgtgttgtaatttgatg-ttagtatgatttcttaatctatgt |
135311 |
T |
|
| Q |
239 |
tgttgat |
245 |
Q |
| |
|
||||||| |
|
|
| T |
135310 |
tgttgat |
135304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1318 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold1318
Description:
Target: scaffold1318; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 42 - 197
Target Start/End: Original strand, 1897 - 2053
Alignment:
| Q |
42 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatcaatttaactgtt-tttaaggtaaaa |
140 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||| |||||| ||||||||| ||||||| || || |||||| |
|
|
| T |
1897 |
tttgtctttgcaattgtaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttgaaagtaaaa |
1996 |
T |
|
| Q |
141 |
ttgggaaaattagggttaatgatgaattcg-aagaaaatgtgtaagaatcaggtttat |
197 |
Q |
| |
|
||||| || | |||||||||||||| || | ||||||| |||||||||| |||||||| |
|
|
| T |
1997 |
ttggg-aattaagggttaatgatgattttgaaagaaaaggtgtaagaattaggtttat |
2053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0348 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0348
Description:
Target: scaffold0348; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 52 - 227
Target Start/End: Complemental strand, 9396 - 9219
Alignment:
| Q |
52 |
caattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatcaatttaactgtt-tttaaggtaaaattgggaaaat |
150 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||| ||||||||| ||||||| || || ||||||||||| || | |
|
|
| T |
9396 |
caattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaaagtaaaattggg-aatt |
9298 |
T |
|
| Q |
151 |
tagggttaatgatgaattcg-aagaaaatgtgtaagaatcaggtttataatgttg-catttgatgattaatatgatttc |
227 |
Q |
| |
|
|||||||||||||| || | ||||||| |||||||||| |||||||| ||||| |||||||| ||| ||||||||| |
|
|
| T |
9297 |
aagggttaatgatgattttgaaagaaaaggtgtaagaattaggtttattgtgttgtaatttgatgtttagtatgatttc |
9219 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0609 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0609
Description:
Target: scaffold0609; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 9 - 116
Target Start/End: Original strand, 5809 - 5916
Alignment:
| Q |
9 |
gagatgaactagagaatcgatcgctgtgttttctttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaa |
108 |
Q |
| |
|
|||| ||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||| |
|
|
| T |
5809 |
gagaagaactagggaaccgattgctgtgttttctttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatatataatttctgaa |
5908 |
T |
|
| Q |
109 |
aagtaatc |
116 |
Q |
| |
|
|| ||||| |
|
|
| T |
5909 |
aattaatc |
5916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0249 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0249
Description:
Target: scaffold0249; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 9 - 110
Target Start/End: Original strand, 13846 - 13947
Alignment:
| Q |
9 |
gagatgaactagagaatcgatcgctgtgttttctttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaa |
108 |
Q |
| |
|
|||| |||||||| ||||||| | || | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||| |
|
|
| T |
13846 |
gagaagaactagaaaatcgattgttgagctttctttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatatataatttctgaa |
13945 |
T |
|
| Q |
109 |
aa |
110 |
Q |
| |
|
|| |
|
|
| T |
13946 |
aa |
13947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0183 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0183
Description:
Target: scaffold0183; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 41 - 110
Target Start/End: Complemental strand, 75 - 6
Alignment:
| Q |
41 |
ctttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaa |
110 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |
|
|
| T |
75 |
ctttatctttgcaattctaaggtaagggtgggattatctttcaatagttctaatatatgatttctgaaaa |
6 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0026
Description:
Target: scaffold0026; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 111789 - 111688
Alignment:
| Q |
9 |
gagatgaactagagaatcgatcgctgtgttttctttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaa |
108 |
Q |
| |
|
|||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| || ||||| |||||| | ||||| ||| |||| |||| |
|
|
| T |
111789 |
gagaagaactagagaatcgattgctgtgttttctttgtcttcgcaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaa |
111690 |
T |
|
| Q |
109 |
aa |
110 |
Q |
| |
|
|| |
|
|
| T |
111689 |
aa |
111688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0129 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0129
Description:
Target: scaffold0129; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 45226 - 45303
Alignment:
| Q |
9 |
gagatgaactagagaatcgatcgctgtgttttctttgtctttgcaattctaaggtaagggtgggattatctttcaata |
86 |
Q |
| |
|
|||| |||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||| || ||||| |||||| |
|
|
| T |
45226 |
gagaagaactagagaatcgattgctgtgttttctttgtcttcgcaaatctaaggtaagggtgagactatctctcaata |
45303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0099 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0099
Description:
Target: scaffold0099; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 59 - 245
Target Start/End: Complemental strand, 13019 - 12821
Alignment:
| Q |
59 |
aaggtaagggtgggattatcttt-caatagttataatatatgatttttgaaaagt-aatcaa---tttaactgtttttaa-ggtaaaatt--gggaaaat |
150 |
Q |
| |
|
||||||||||||||||||||||| |||||||| ||||||||||||| | |||| | |||| | |||||||||| |||| ||||||| | |||||| | |
|
|
| T |
13019 |
aaggtaagggtgggattatctttacaatagttctaatatatgatttctaaaaaattaatctaaattttaactgttcttaaaggtaaaaattggggaaatt |
12920 |
T |
|
| Q |
151 |
tagggttaatg-atgaattcgaagaaaatgtgt-aagaatc-aggtttataatgttgcatttg-atgattaatatgatttcctactctgtattgttgat |
245 |
Q |
| |
|
||||||||||| |||| | |||| |||||||| ||||||| ||||||||||||||| ||||| ||||||| |||||||||||| ||| || ||||||| |
|
|
| T |
12919 |
tagggttaatgtatgattctgaaggaaatgtgttaagaatctaggtttataatgttgtatttgtatgattagtatgatttcctaatctataatgttgat |
12821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0720 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0720
Description:
Target: scaffold0720; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 3387 - 3461
Alignment:
| Q |
42 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatc |
116 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||| | |||||||| |||| |||||| ||||| |
|
|
| T |
3387 |
tttgtctttgcaattctaaggtaagggtgatattatctttcaatgaatttaatatataatttctgaaaattaatc |
3461 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0127 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0127
Description:
Target: scaffold0127; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 120
Target Start/End: Complemental strand, 10309 - 10231
Alignment:
| Q |
42 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatcaatt |
120 |
Q |
| |
|
||||||| | ||||||||||||||||||| ||||||||| ||||| | ||||||| | |||| |||||| ||||||||| |
|
|
| T |
10309 |
tttgtctctacaattctaaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaattaatcaatt |
10231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 493013 - 493057
Alignment:
| Q |
42 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaata |
86 |
Q |
| |
|
||||||| ||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
493013 |
tttgtctctgcaattctaaggtaagggtgagattatctttcaata |
493057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0261 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0261
Description:
Target: scaffold0261; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 23562 - 23628
Alignment:
| Q |
50 |
tgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatc |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| | ||||| ||| |||| |||||| ||||| |
|
|
| T |
23562 |
tgcaattctaaggtaagggtgggattatctttgaatgatcataatgtataatttctgaaaattaatc |
23628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0553 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0553
Description:
Target: scaffold0553; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 10180 - 10248
Alignment:
| Q |
42 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaa |
110 |
Q |
| |
|
||||||| | |||||||||||||||||||||| ||||| |||||| | ||||| ||| |||| |||||| |
|
|
| T |
10180 |
tttgtctatacaattctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaa |
10248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0553; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 85
Target Start/End: Original strand, 11079 - 11111
Alignment:
| Q |
53 |
aattctaaggtaagggtgggattatctttcaat |
85 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| |
|
|
| T |
11079 |
aattctaaggtaagggtgggattatccttcaat |
11111 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0544 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0544
Description:
Target: scaffold0544; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 1510 - 1578
Alignment:
| Q |
42 |
tttgtctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaa |
110 |
Q |
| |
|
||||||| | |||||||||||||||||||||| ||||| |||||| | ||||| ||| |||| |||||| |
|
|
| T |
1510 |
tttgtctatacaattctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaa |
1578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0034 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0034
Description:
Target: scaffold0034; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 73347 - 73281
Alignment:
| Q |
50 |
tgcaattctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaagtaatc |
116 |
Q |
| |
|
||||||| | |||||||||||||||||||||||||| | ||||| ||| |||| |||||| ||||| |
|
|
| T |
73347 |
tgcaattatgaggtaagggtgggattatctttcaatgatcataatgtataatttatgaaaattaatc |
73281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold2054 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold2054
Description:
Target: scaffold2054; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 110
Target Start/End: Complemental strand, 770 - 717
Alignment:
| Q |
57 |
ctaaggtaagggtgggattatctttcaatagttataatatatgatttttgaaaa |
110 |
Q |
| |
|
||||||||||||||||||||||||||||| | |||||||| |||| |||||| |
|
|
| T |
770 |
ctaaggtaagggtgggattatctttcaatgatcttaatatataatttctgaaaa |
717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0453 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0453
Description:
Target: scaffold0453; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 85
Target Start/End: Original strand, 10546 - 10578
Alignment:
| Q |
53 |
aattctaaggtaagggtgggattatctttcaat |
85 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| |
|
|
| T |
10546 |
aattctaaggtaagtgtgggattatctttcaat |
10578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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