View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8146_low_9 (Length: 291)
Name: NF8146_low_9
Description: NF8146
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8146_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 25 - 284
Target Start/End: Complemental strand, 42206019 - 42205741
Alignment:
| Q |
25 |
catttgttgttgtggtatgttttctttcattttcatatggattcaagtatttttgtaacaaggttggattaaactaaaagagagatgtaggtgctattac |
124 |
Q |
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| T |
42206019 |
catttgttgttgtggtatgttttctttcattttcatatggattcaagtatttttgtaacaaggttggattaaactaaaagagagatgtaggtgctattac |
42205920 |
T |
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| Q |
125 |
tggcagtctgcagagttataacacctagtacaaagtgctatatattagccaatttgccattcggttgttcac-------------------atatttaga |
205 |
Q |
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| T |
42205919 |
tggcagtctgcagagttataacacctagtacaaagtgctatatattagccaatttgccattcggttgttcacatatcaagtctaaattttcatatttaga |
42205820 |
T |
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| Q |
206 |
ggtagaagttcattttgttatcttaaatcatattaggaagaaagtttacaatgactagtgatgaattggagaataatat |
284 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42205819 |
ggtagaagttcattttgttatcttaaatcatattaggaagaaagtttacaatgactagtgatgaattggagaataatat |
42205741 |
T |
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