View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8149_low_16 (Length: 248)
Name: NF8149_low_16
Description: NF8149
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8149_low_16 |
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Alignment Details
Target: chr2 (Bit Score: 169; Significance: 9e-91; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 28 - 204
Target Start/End: Original strand, 8932229 - 8932405
Alignment:
| Q |
28 |
taatattcagaaataatttgcttatggtagaatttcatgggaaaacagctgcagaactatccaaaattttcaatttgtgtttaaaaggattccagaacag |
127 |
Q |
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| T |
8932229 |
taatattcagaaataatttgcttatggtagaatttcatgggaaaacagctgcagaactatccaaaattttcaatttgtgtttaaaaggattccagaacag |
8932328 |
T |
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| Q |
128 |
aagttcattttgagctcaaattatgaaggaaattctatccatgggcttcattggagacacatcattctttcatctca |
204 |
Q |
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| T |
8932329 |
aagttcattttgagctcaaattatgaaggaaattctgtccataggcttcattggagacacatcattctttcatctca |
8932405 |
T |
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