View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8151_low_5 (Length: 260)
Name: NF8151_low_5
Description: NF8151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8151_low_5 |
 | |
|
| [»] chr6 (32 HSPs) |
| |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] scaffold0477 (1 HSPs) |
| |
|
| [»] scaffold0475 (1 HSPs) |
| | |
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Alignment Details
Target: chr6 (Bit Score: 234; Significance: 1e-129; HSPs: 32)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 15 - 260
Target Start/End: Original strand, 4563844 - 4564089
Alignment:
| Q |
15 |
gacatcaattcattgacaagtttctccacctcttctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagtttg |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4563844 |
gacatcaattcattgacaagtttctccacctcttctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagtttg |
4563943 |
T |
|
| Q |
115 |
ttggctgatcaccaaagaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctat |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
4563944 |
ttggctgatcaccaaagaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccgccaat |
4564043 |
T |
|
| Q |
215 |
tgaagggtggttcaaaactttctcctgtggacaccaacttgcaatt |
260 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
4564044 |
tgaagggtggttcaatactttctcctgtggacaccaacttgcaatt |
4564089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 17 - 250
Target Start/End: Original strand, 4592366 - 4592599
Alignment:
| Q |
17 |
catcaattcattgacaagtttctccacctcttctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagtttgtt |
116 |
Q |
| |
|
|||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
4592366 |
catcaattcattgataagtttctccacctcctctctctttacattcgtatcaatttccatcccaatctcccattcattgtaaataagtctacagtttgtt |
4592465 |
T |
|
| Q |
117 |
ggctgatcaccaaagaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattg |
216 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||| |
|
|
| T |
4592466 |
ggctgatcactaaagaatggccaacacaacattggaattccagcacatatactttcagtggttgagttccatccacaatgagtcaagaatccaccaattg |
4592565 |
T |
|
| Q |
217 |
aagggtggttcaaaactttctcctgtggacacca |
250 |
Q |
| |
|
|||||||||| || |||| ||| || |||||||| |
|
|
| T |
4592566 |
aagggtggtttaatacttgctcttgaggacacca |
4592599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 17 - 256
Target Start/End: Complemental strand, 4515118 - 4514879
Alignment:
| Q |
17 |
catcaattcattgacaagtttctccacctcttctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagtttgtt |
116 |
Q |
| |
|
|||||||||||||||||| || || ||||| |||||||| |||||| |||||||||| ||||||||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
4515118 |
catcaattcattgacaagcttttcaacctcctctctcttcacattcatatcgatttcgatcccaatctcccattcattgcaaataaatctacagtttgtt |
4515019 |
T |
|
| Q |
117 |
ggctgatcaccaaagaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattg |
216 |
Q |
| |
|
|| ||||||||||||||| ||||||| | |||||| |||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
4515018 |
ggttgatcaccaaagaattgccaacaaagcattggcactccagcgcatatgctctcagtggttgagttccatccgcaatgagtcaagaatccgccaattg |
4514919 |
T |
|
| Q |
217 |
aagggtggttcaaaactttctcctgtggacaccaacttgc |
256 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
4514918 |
aagggtggttcaaaactttctcttgtggacaccaacttgc |
4514879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 37 - 256
Target Start/End: Original strand, 4480848 - 4481067
Alignment:
| Q |
37 |
tctccacctcttctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagtttgttggctgatcaccaaagaatgg |
136 |
Q |
| |
|
||||||| ||||||||||| ||||| ||||||||||| | |||||||||||||||||| |||||| ||||| ||| | ||||||||| |||||||||| |
|
|
| T |
4480848 |
tctccacatcttctctcttcacattggtatcgatttcgagtccaatctcccattcattgcaaataattctacggttaggtggctgatcggcaaagaatgg |
4480947 |
T |
|
| Q |
137 |
ccaacacaacattggaactccagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttc |
236 |
Q |
| |
|
||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
4480948 |
ccaacacaacattggcactccagcacatacactttcagtggttgagttccatccgcaatgagtcaagaatccgccgattgaagggtggttcaaaactttc |
4481047 |
T |
|
| Q |
237 |
tcctgtggacaccaacttgc |
256 |
Q |
| |
|
|| ||||||||||||||||| |
|
|
| T |
4481048 |
tcttgtggacaccaacttgc |
4481067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 14 - 256
Target Start/End: Original strand, 4574440 - 4574682
Alignment:
| Q |
14 |
ggacatcaattcattgacaagtttctccacctcttctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagttt |
113 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| || ||||||||||| |||||||||||| | |||||||||||||||||| ||||| ||| |||||| |
|
|
| T |
4574440 |
ggacatcaattcattgaccagtttctccacctcctccctctttacattagtatcgatttcctttccaatctcccattcattgcaaatatatctgcagttt |
4574539 |
T |
|
| Q |
114 |
gttggctgatcaccaaagaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgccta |
213 |
Q |
| |
|
| ||||||||| ||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || | |
|
|
| T |
4574540 |
gctggctgatccgaaaaaaatggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccga |
4574639 |
T |
|
| Q |
214 |
ttgaagggtggttcaaaactttctcctgtggacaccaacttgc |
256 |
Q |
| |
|
|||| |||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
4574640 |
ctgaaaggtggttcaatactttctcttgtggacaccaacttgc |
4574682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 17 - 256
Target Start/End: Complemental strand, 4267163 - 4266924
Alignment:
| Q |
17 |
catcaattcattgacaagtttctccacctcttctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagtttgtt |
116 |
Q |
| |
|
||||||||||||||| | ||||| || || |||||||| ||||| |||| |||||| | |||||||||||||||| | |||||| ||||||||||||| |
|
|
| T |
4267163 |
catcaattcattgactaacttctcgacgtcatctctcttcacatttgtattgatttcgagtccaatctcccattcatagcaaataaatctacagtttgtt |
4267064 |
T |
|
| Q |
117 |
ggctgatcaccaaagaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattg |
216 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||||| || || | |
|
|
| T |
4267063 |
ggctgatcaccaaagaatggccaacacaacattggcactccagcacatatgctttcagtggttgaattccatccgcaatgagtcaagaatccaccaatcg |
4266964 |
T |
|
| Q |
217 |
aagggtggttcaaaactttctcctgtggacaccaacttgc |
256 |
Q |
| |
|
||||||||||||| ||||| || ||||||||||||||||| |
|
|
| T |
4266963 |
aagggtggttcaacactttatcttgtggacaccaacttgc |
4266924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 17 - 256
Target Start/End: Original strand, 4457729 - 4457968
Alignment:
| Q |
17 |
catcaattcattgacaagtttctccacctcttctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagtttgtt |
116 |
Q |
| |
|
||||||||||||||| | ||||||||||| |||||||| ||||| ||||||||||||||||||||||| ||||||||| |||||| |||||| ||||| |
|
|
| T |
4457729 |
catcaattcattgactaacttctccacctcatctctcttcacatttgtatcgatttccatcccaatctctcattcattgcaaataaatctacaacttgtt |
4457828 |
T |
|
| Q |
117 |
ggctgatcaccaaagaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattg |
216 |
Q |
| |
|
|||| |||||||||||||||||||| || |||||| |||||||| ||||| ||||||||||||||||| ||||| ||||||||||||||||| || |||| |
|
|
| T |
4457829 |
ggcttatcaccaaagaatggccaacgcagcattggcactccagcgcatatgctttcagtggttgagtttcatccacaatgagtcaagaatcctccgattg |
4457928 |
T |
|
| Q |
217 |
aagggtggttcaaaactttctcctgtggacaccaacttgc |
256 |
Q |
| |
|
||||||||||||| ||||| || ||||||||||||||||| |
|
|
| T |
4457929 |
aagggtggttcaacactttatcttgtggacaccaacttgc |
4457968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 14 - 256
Target Start/End: Original strand, 4560638 - 4560880
Alignment:
| Q |
14 |
ggacatcaattcattgacaagtttctccacctcttctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagttt |
113 |
Q |
| |
|
|||||||||||||||||| ||||||||||| || || ||||||||||| ||||| ||||| | ||||||| |||||||||| ||||| ||| |||||| |
|
|
| T |
4560638 |
ggacatcaattcattgaccagtttctccacgtcctccctctttacatttgtatcaatttcgtttccaatcttccattcattgcaaatatatcttcagttt |
4560737 |
T |
|
| Q |
114 |
gttggctgatcaccaaagaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgccta |
213 |
Q |
| |
|
| ||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || | |
|
|
| T |
4560738 |
gctggctgatctgcaaaaaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccga |
4560837 |
T |
|
| Q |
214 |
ttgaagggtggttcaaaactttctcctgtggacaccaacttgc |
256 |
Q |
| |
|
||| ||||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
4560838 |
ctgatgggtggttcaatactttctcttgtggacaccaacttgc |
4560880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 17 - 252
Target Start/End: Original strand, 4585771 - 4586006
Alignment:
| Q |
17 |
catcaattcattgacaagtttctccacctcttctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagtttgtt |
116 |
Q |
| |
|
||||||||||||||| | ||||||||||| |||||||| ||||| || || | ||||||||||||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
4585771 |
catcaattcattgaccaacttctccacctcctctctcttcacattggtgtcaacttccatcccaatctcccattcattgcaaataattctacagtttgtt |
4585870 |
T |
|
| Q |
117 |
ggctgatcaccaaagaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattg |
216 |
Q |
| |
|
||||||||| ||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| || |||||||||||||| || |||| |
|
|
| T |
4585871 |
ggctgatcagcaatgaatggccaacacaacattggcactccagcacatatgctttcagtggttgagttccatccacagtgagtcaagaatccaccaattg |
4585970 |
T |
|
| Q |
217 |
aagggtggttcaaaactttctcctgtggacaccaac |
252 |
Q |
| |
|
||||||||||||| |||| ||| || || ||||||| |
|
|
| T |
4585971 |
aagggtggttcaatacttgctcttgcgggcaccaac |
4586006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 18 - 256
Target Start/End: Original strand, 4601925 - 4602163
Alignment:
| Q |
18 |
atcaattcattgacaagtttctccacctcttctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagtttgttg |
117 |
Q |
| |
|
|||| |||||||| || ||| ||| ||| |||||||| ||||| |||||||||||||| ||||||||||||||||| |||||| |||||||||||||| |
|
|
| T |
4601925 |
atcacttcattgatcagcttcgccaactcctctctcttcacatttgtatcgatttccataccaatctcccattcattacaaataaatctacagtttgttg |
4602024 |
T |
|
| Q |
118 |
gctgatcaccaaagaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattga |
217 |
Q |
| |
|
||||||| |||| || |||||||||||||| || |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| || || |
|
|
| T |
4602025 |
gctgatcggcaaaaaaaggccaacacaacatcggcactccagcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccgccgatcga |
4602124 |
T |
|
| Q |
218 |
agggtggttcaaaactttctcctgtggacaccaacttgc |
256 |
Q |
| |
|
|||||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
4602125 |
agggtggttcaacactttctcttgtggacaccaacttgc |
4602163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 48 - 256
Target Start/End: Original strand, 4617188 - 4617396
Alignment:
| Q |
48 |
tctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagtttgttggctgatcaccaaagaatggccaacacaaca |
147 |
Q |
| |
|
|||||||| |||||||||||||||||||| ||||||||||||||||| |||||| |||||||| ||||||||| || |||| |||||||||||||||| |
|
|
| T |
4617188 |
tctctcttcacattcgtatcgatttccataccaatctcccattcattacaaataaatctacagtctgttggctggtcggcaaaaaatggccaacacaaca |
4617287 |
T |
|
| Q |
148 |
ttggaactccagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcctgtggaca |
247 |
Q |
| |
|
|||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||| ||||| || |||||||| |
|
|
| T |
4617288 |
ttggcactccagcgcatatactttcagtggttgaattccatccgcaatgagtcaagaatcctccgattgaagggtggttcaacactttgtcttgtggaca |
4617387 |
T |
|
| Q |
248 |
ccaacttgc |
256 |
Q |
| |
|
||||||||| |
|
|
| T |
4617388 |
ccaacttgc |
4617396 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 17 - 250
Target Start/End: Original strand, 4469938 - 4470171
Alignment:
| Q |
17 |
catcaattcattgacaagtttctccacctcttctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagtttgtt |
116 |
Q |
| |
|
||||||||||||||| || ||||||||||| |||||||| |||| |||||||||| | |||||||||||||||||| |||||| |||||| |||| | |
|
|
| T |
4469938 |
catcaattcattgactagcttctccacctcatctctcttcacatctttatcgatttcaagtccaatctcccattcattgcaaataaatctacaatttgct |
4470037 |
T |
|
| Q |
117 |
ggctgatcaccaaagaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattg |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| || |||| |
|
|
| T |
4470038 |
agctgatcaccaaagaatggccaacacaacattggcactccagcgcatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgattg |
4470137 |
T |
|
| Q |
217 |
aagggtggttcaaaactttctcctgtggacacca |
250 |
Q |
| |
|
|||||||||||| |||| ||| || |||||||| |
|
|
| T |
4470138 |
aagggtggttcagtacttgctcttgaggacacca |
4470171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 17 - 250
Target Start/End: Complemental strand, 4613715 - 4613482
Alignment:
| Q |
17 |
catcaattcattgacaagtttctccacctcttctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagtttgtt |
116 |
Q |
| |
|
||||||||||||||| || ||||| ||||| |||||||| ||||| || || |||||||||||||| |||||||||||| | ||| ||| ||||||| | |
|
|
| T |
4613715 |
catcaattcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccatcccaatttcccattcattgcatatatatctgcagtttgct |
4613616 |
T |
|
| Q |
117 |
ggctgatcaccaaagaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattg |
216 |
Q |
| |
|
|||||||| | || |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
4613615 |
ggctgatccgcgaaaaatggccaacacaacattggcactccagcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccgccaattg |
4613516 |
T |
|
| Q |
217 |
aagggtggttcaaaactttctcctgtggacacca |
250 |
Q |
| |
|
|||||||||| || |||| ||| || |||||||| |
|
|
| T |
4613515 |
aagggtggtttaatacttgctcttgaggacacca |
4613482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 17 - 256
Target Start/End: Original strand, 3171876 - 3172115
Alignment:
| Q |
17 |
catcaattcattgacaagtttctccacctcttctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagtttgtt |
116 |
Q |
| |
|
||||||||| |||| |||||||| ||||| ||||||||||||| ||||| |||||||||||||||| |||||| | | |||||| ||||| ||| | | |
|
|
| T |
3171876 |
catcaattcgttgatcagtttctctacctcccctctctttacattggtatcaatttccatcccaatcttccattcttggcaaataattctactgttaggt |
3171975 |
T |
|
| Q |
117 |
ggctgatcaccaaagaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattg |
216 |
Q |
| |
|
|| |||||| |||| ||||||| |||||||||||| | ||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||| |||| |
|
|
| T |
3171976 |
ggttgatcagcaaaaaatggcctacacaacattggcattccagcacatacactttccgtggttgagttccatccgcagtgagtcaagaatccgccaattg |
3172075 |
T |
|
| Q |
217 |
aagggtggttcaaaactttctcctgtggacaccaacttgc |
256 |
Q |
| |
|
|||| |||||||| |||||||| || |||||||||||||| |
|
|
| T |
3172076 |
aaggatggttcaacactttctcttgcggacaccaacttgc |
3172115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 17 - 256
Target Start/End: Complemental strand, 4490352 - 4490113
Alignment:
| Q |
17 |
catcaattcattgacaagtttctccacctcttctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagtttgtt |
116 |
Q |
| |
|
|||||||||||||| |||||||| |||||||||||||||||||| ||||| |||| |||||||||||||||||| | | |||||| ||||| | | | |
|
|
| T |
4490352 |
catcaattcattgatcagtttctctacctcttctctctttacattggtatcaattttcatcccaatctcccattcttcgcaaataattctactgctaagt |
4490253 |
T |
|
| Q |
117 |
ggctgatcaccaaagaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattg |
216 |
Q |
| |
|
|| |||||| |||| |||||||||||||||||||| ||||||||||||||||| || || ||||||||||||| ||||||||||||||||| || |||| |
|
|
| T |
4490252 |
ggttgatcagcaaaaaatggccaacacaacattggcactccagcacatatactctccatgattgagttccatccacaatgagtcaagaatccaccaattg |
4490153 |
T |
|
| Q |
217 |
aagggtggttcaaaactttctcctgtggacaccaacttgc |
256 |
Q |
| |
|
||||||| ||||| || ||||| ||||||||||||||||| |
|
|
| T |
4490152 |
aagggtgattcaataccttctcttgtggacaccaacttgc |
4490113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 47 - 256
Target Start/End: Original strand, 4506022 - 4506231
Alignment:
| Q |
47 |
ttctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagtttgttggctgatcaccaaagaatggccaacacaac |
146 |
Q |
| |
|
|||||| || ||||| ||||| ||||| || ||||||||| |||||||| |||||| ||||||||||||||| |||||||||||||| |||||||||| | |
|
|
| T |
4506022 |
ttctctattcacattagtatcaatttcgattccaatctccaattcattgcaaataaatctacagtttgttggttgatcaccaaagaacggccaacacagc |
4506121 |
T |
|
| Q |
147 |
attggaactccagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcctgtggac |
246 |
Q |
| |
|
||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||| || || |||||||| |||| || |
|
|
| T |
4506122 |
attggcactccagcgcatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccaattgaagggtgatttaacactttctcttgtgaac |
4506221 |
T |
|
| Q |
247 |
accaacttgc |
256 |
Q |
| |
|
|||| ||||| |
|
|
| T |
4506222 |
accagcttgc |
4506231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 17 - 256
Target Start/End: Original strand, 4461258 - 4461497
Alignment:
| Q |
17 |
catcaattcattgacaagtttctccacctcttctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagtttgtt |
116 |
Q |
| |
|
||||||||| ||||| | ||||||||||| || ||||| |||| |||||||||| | ||||||||||||| ||| |||||| ||||||||||| | |
|
|
| T |
4461258 |
catcaattcgttgaccaacttctccacctcatccctcttcacatctttatcgatttcaagtccaatctcccatttgttgcaaataaatctacagtttgct |
4461357 |
T |
|
| Q |
117 |
ggctgatcaccaaagaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattg |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||| |||||||| ||||||||||||||||| || |||| |
|
|
| T |
4461358 |
ggctgatcaccaaagaatggccaacacaacatcggcactccagcacatatgctttcagtggttgaattccatccacaatgagtcaagaatccaccaattg |
4461457 |
T |
|
| Q |
217 |
aagggtggttcaaaactttctcctgtggacaccaacttgc |
256 |
Q |
| |
|
|||||||||||| |||| ||| || |||||||| ||||| |
|
|
| T |
4461458 |
aagggtggttcagtacttgctcttgcggacaccagcttgc |
4461497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 15 - 253
Target Start/End: Complemental strand, 4256611 - 4256372
Alignment:
| Q |
15 |
gacatcaattcattgacaagtttctccacctcttctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagtttg |
114 |
Q |
| |
|
|||||||||||||||| || ||||||||||| |||||||| ||||| |||| |||||| || |||||||||||||| | |||||| ||||||||||| |
|
|
| T |
4256611 |
gacatcaattcattgatcagattctccacctcatctctcttcacattagtattgatttcaattccaatctcccattcgctacaaataaatctacagtttg |
4256512 |
T |
|
| Q |
115 |
ttgg-ctgatcaccaaagaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgccta |
213 |
Q |
| |
|
|||| ||||||| |||| |||||||||||||||||||||||||| ||||| || |||||| |||||||||||||||| ||||||||||||||||| || | |
|
|
| T |
4256511 |
ttggtctgatcagcaaaaaatggccaacacaacattggaactccggcacaaatgctttcaatggttgagttccatcctcaatgagtcaagaatccaccaa |
4256412 |
T |
|
| Q |
214 |
ttgaagggtggttcaaaactttctcctgtggacaccaact |
253 |
Q |
| |
|
||||| |||||||| |||| ||| || ||||||||||| |
|
|
| T |
4256411 |
ctgaagagtggttcagtacttgctcttgcggacaccaact |
4256372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 17 - 226
Target Start/End: Original strand, 4557260 - 4557469
Alignment:
| Q |
17 |
catcaattcattgacaagtttctccacctcttctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagtttgtt |
116 |
Q |
| |
|
||||||||||||||| | ||||| ||||| |||||||| ||||| || || |||||||| |||||||||||| |||| ||||| ||| ||||||| | |
|
|
| T |
4557260 |
catcaattcattgaccaaattctctacctcatctctcttcacattggtgtcaatttccatgccaatctcccatgtattgcaaatatatctgcagtttgct |
4557359 |
T |
|
| Q |
117 |
ggctgatcaccaaagaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattg |
216 |
Q |
| |
|
||||||||| |||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||| || |||| |
|
|
| T |
4557360 |
ggctgatcagcaaaaaatggccaacacaacattggaactccagcagatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaattg |
4557459 |
T |
|
| Q |
217 |
aagggtggtt |
226 |
Q |
| |
|
|||| ||||| |
|
|
| T |
4557460 |
aaggatggtt |
4557469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 17 - 256
Target Start/End: Complemental strand, 4504394 - 4504155
Alignment:
| Q |
17 |
catcaattcattgacaagtttctccacctcttctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagtttgtt |
116 |
Q |
| |
|
|||||||||||| | ||||||||| ||||||||||||| |||||| | ||| || | |||||||||||||||||| | | |||||| | | || | |
|
|
| T |
4504394 |
catcaattcattaataagtttctctacctcttctctctgtacattggcatcaatcttcatcccaatctcccattcttcgcaaataatgttgctattaagt |
4504295 |
T |
|
| Q |
117 |
ggctgatcaccaaagaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattg |
216 |
Q |
| |
|
||||||||| ||| |||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||| ||||||||||||||||| || |||| |
|
|
| T |
4504294 |
ggctgatcagaaaaaaatggccaacacaacattggcactccagcacaaacactttcagtggttgagttccatccacaatgagtcaagaatcctccgattg |
4504195 |
T |
|
| Q |
217 |
aagggtggttcaaaactttctcctgtggacaccaacttgc |
256 |
Q |
| |
|
||||||||||||| ||||| || ||||||||||||||||| |
|
|
| T |
4504194 |
aagggtggttcaacactttatcttgtggacaccaacttgc |
4504155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 17 - 256
Target Start/End: Original strand, 4626086 - 4626325
Alignment:
| Q |
17 |
catcaattcattgacaagtttctccacctcttctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagtttgtt |
116 |
Q |
| |
|
||||||| |||||| |||||||| ||| | || ||||| ||||| | |||||||||||| |||||||||||||||||| ||||| |||||| |||||| |
|
|
| T |
4626086 |
catcaatgcattgatcagtttctctaccccctccctcttcacattagcatcgatttccattccaatctcccattcattgcaaatatatctacaatttgtt |
4626185 |
T |
|
| Q |
117 |
ggctgatcaccaaagaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattg |
216 |
Q |
| |
|
||||||||| |||| ||||||||||| ||||||||||||||| ||||| |||||| |||||||||||||||| |||||||| |||||||| || |||| |
|
|
| T |
4626186 |
ggctgatcagcaaaatttggccaacacagcattggaactccagcgcatatgctttcaatggttgagttccatccacaatgagttaagaatccaccaattg |
4626285 |
T |
|
| Q |
217 |
aagggtggttcaaaactttctcctgtggacaccaacttgc |
256 |
Q |
| |
|
|||| ||||||| |||||||| || |||||||| ||||| |
|
|
| T |
4626286 |
aaggatggttcagtactttctcttgcggacaccagcttgc |
4626325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 24 - 260
Target Start/End: Original strand, 4493097 - 4493333
Alignment:
| Q |
24 |
tcattgacaagtttctccacctcttctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagtttgttggctgat |
123 |
Q |
| |
|
|||||||| || |||||||| | |||||| || |||||| |||||||||| | ||||||||| |||||||| |||| | |||||||||||||||||||| |
|
|
| T |
4493097 |
tcattgaccagattctccacattttctctattaacattcctatcgatttctactccaatctccaattcattgcaaatcaatctacagtttgttggctgat |
4493196 |
T |
|
| Q |
124 |
caccaaagaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtg |
223 |
Q |
| |
|
||| |||||| ||||||||||||||||| ||||| |||||||| ||| || |||||||||||||| ||||||||||||||||| || || ||| |||| |
|
|
| T |
4493197 |
cactaaagaaaggccaacacaacattggcactccggcacatatgtttttggtagttgagttccatccacaatgagtcaagaatccaccaatcgaatggtg |
4493296 |
T |
|
| Q |
224 |
gttcaaaactttctcctgtggacaccaacttgcaatt |
260 |
Q |
| |
|
||||| | |||||| |||||||||||||| |||||| |
|
|
| T |
4493297 |
gttcagcagtttctcttgtggacaccaactagcaatt |
4493333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 17 - 238
Target Start/End: Original strand, 4571107 - 4571328
Alignment:
| Q |
17 |
catcaattcattgacaagtttctccacctcttctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagtttgtt |
116 |
Q |
| |
|
||||||||||||||| | ||||||||||| | |||||| ||||| ||||||||||| || |||||||||||| |||| | ||| ||||||||||| | |
|
|
| T |
4571107 |
catcaattcattgaccaaattctccacctcatttctcttcacattagtatcgatttcgattccaatctcccatgtattgcagatatatctacagtttgct |
4571206 |
T |
|
| Q |
117 |
ggctgatcaccaaagaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattg |
216 |
Q |
| |
|
||||||||| |||| |||||| ||||||||||||||||||||| | |||| ||||| || |||||||||||||| || ||||||||||| || || |||| |
|
|
| T |
4571207 |
ggctgatcagcaaaaaatggctaacacaacattggaactccagtagatatgctttcggtcgttgagttccatccacagtgagtcaagaaaccaccaattg |
4571306 |
T |
|
| Q |
217 |
aagggtggttcaaaactttctc |
238 |
Q |
| |
|
|||| |||||||| |||||||| |
|
|
| T |
4571307 |
aaggatggttcaatactttctc |
4571328 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 15 - 252
Target Start/End: Original strand, 4622275 - 4622512
Alignment:
| Q |
15 |
gacatcaattcattgacaagtttctccacctcttctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagtttg |
114 |
Q |
| |
|
|||||||||||||||| || ||| |||||| ||||| || ||||| |||| |||||| || |||||||||||| |||| | ||| ||||||||||| |
|
|
| T |
4622275 |
gacatcaattcattgatcagattcgacacctcctctcttttcacattagtattgatttcgattccaatctcccatgaattgcagatatatctacagtttg |
4622374 |
T |
|
| Q |
115 |
ttggctgatcaccaaagaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctat |
214 |
Q |
| |
|
||||||||||| | || ||||||||||||| ||||| ||||||||||||||| ||||| |||||||| |||||||| ||||||||||||||||| || || |
|
|
| T |
4622375 |
ttggctgatcagcgaaaaatggccaacacagcattgaaactccagcacatatgctttcggtggttgaattccatccacaatgagtcaagaatccaccaat |
4622474 |
T |
|
| Q |
215 |
tgaagggtggttcaaaactttctcctgtggacaccaac |
252 |
Q |
| |
|
|| ||||||||| | |||| ||| ||||||||||||| |
|
|
| T |
4622475 |
tgcagggtggttaagtacttcctcttgtggacaccaac |
4622512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 23 - 250
Target Start/End: Complemental strand, 4260145 - 4259918
Alignment:
| Q |
23 |
ttcattgacaagtttctccacctcttctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagtttgttggctga |
122 |
Q |
| |
|
|||||||| || ||| ||||||| ||||| || ||||| |||| ||||| || |||||||||||||| || |||||| ||||||||||||||||||| |
|
|
| T |
4260145 |
ttcattgatcagcttcgccacctcatctcttttcacattagtattaatttcaattccaatctcccattcgttacaaataaatctacagtttgttggctga |
4260046 |
T |
|
| Q |
123 |
tcaccaaagaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggt |
222 |
Q |
| |
|
||| |||| |||||||||||||||||||||||| | ||||| || |||||| ||||||||||||||||||||||||| |||||||| || | ||||| || |
|
|
| T |
4260045 |
tcagcaaaaaatggccaacacaacattggaacttcggcacaaatgctttcaatggttgagttccatccgcaatgagttaagaatccaccaactgaagagt |
4259946 |
T |
|
| Q |
223 |
ggttcaaaactttctcctgtggacacca |
250 |
Q |
| |
|
|||||| |||| ||| || |||||||| |
|
|
| T |
4259945 |
ggttcagtacttgctcttgcggacacca |
4259918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 15 - 258
Target Start/End: Original strand, 4598304 - 4598547
Alignment:
| Q |
15 |
gacatcaattcattgacaagtttctccacctcttctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagtttg |
114 |
Q |
| |
|
||||||||||| ||||| || ||||||||||| |||||||| ||||| || || |||| || |||||||||||||||||| ||||| ||| ||||| | |
|
|
| T |
4598304 |
gacatcaattcgttgaccagcttctccacctcctctctcttcacattagtttcaattttgattccaatctcccattcattgcaaatatatctgcagttgg |
4598403 |
T |
|
| Q |
115 |
ttggctgatcaccaaagaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctat |
214 |
Q |
| |
|
| ||||||| | || || || |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| || || |
|
|
| T |
4598404 |
cttgctgatccgcgaaaaagggacaacacaacattggcactccggcacatatactttcagtggttgagttccatccgcaatgagttaagaatccaccaat |
4598503 |
T |
|
| Q |
215 |
tgaagggtggttcaaaactttctcctgtggacaccaacttgcaa |
258 |
Q |
| |
|
|||||| ||||| || |||| ||| || ||||||| ||||||| |
|
|
| T |
4598504 |
tgaaggatggtttaatacttgctcttgcagacaccagcttgcaa |
4598547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 250
Target Start/End: Original strand, 4579567 - 4579800
Alignment:
| Q |
17 |
catcaattcattgacaagtttctccacctcttctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagtttgtt |
116 |
Q |
| |
|
|||||||||||| || || ||||||||||| |||||||| ||||| || |||||||| || ||||| | |||| |||| | | | ||| ||| || | |
|
|
| T |
4579567 |
catcaattcattaaccagcttctccacctcctctctcttcacattagtgtcgatttcaattccaattttccatgtattgcataaatatctgcagcttact |
4579666 |
T |
|
| Q |
117 |
ggctgatcaccaaagaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattg |
216 |
Q |
| |
|
|| |||||| | || |||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||| || |||| |
|
|
| T |
4579667 |
gggtgatcagcgaaaaatggccaacacaacattggaactccagcagatatgctttcagtgattgagttccatccgcaatgagtcaagaatccaccaattg |
4579766 |
T |
|
| Q |
217 |
aagggtggttcaaaactttctcctgtggacacca |
250 |
Q |
| |
|
|||||||||||| |||| ||| || |||||||| |
|
|
| T |
4579767 |
aagggtggttcagtacttgctcttgcggacacca |
4579800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 256
Target Start/End: Original strand, 4516460 - 4516695
Alignment:
| Q |
21 |
aattcattgacaagtttctccacctcttctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagtttgttggct |
120 |
Q |
| |
|
|||||||||| || ||||||||||| |||||||| ||||| ||||| ||||| |||||||||||||||||| ||||| ||| || |||||||||| |
|
|
| T |
4516460 |
aattcattgatcagcttctccacctcctctctcttcacattggtatcaatttctgctccaatctcccattcattgcaaatatatctgcaatttgttggct |
4516559 |
T |
|
| Q |
121 |
gatcaccaaagaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagg |
220 |
Q |
| |
|
| ||| |||| || ||||||||||||||||| ||||| ||||| || ||||| | || ||||||||||| ||||||||||||||||| || | |||||| |
|
|
| T |
4516560 |
gctcagcaaaaaaaggccaacacaacattggtactccggcacagatgctttccattgtggagttccatccacaatgagtcaagaatcctccaactgaagg |
4516659 |
T |
|
| Q |
221 |
gtggttcaaaactttctcctgtggacaccaacttgc |
256 |
Q |
| |
|
|||||||| |||||||| || |||||||| ||||| |
|
|
| T |
4516660 |
atggttcaacactttctcttgcggacaccagcttgc |
4516695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 256
Target Start/End: Original strand, 4568210 - 4568430
Alignment:
| Q |
36 |
ttctccacctcttctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagtttgttggctgatcaccaaagaatg |
135 |
Q |
| |
|
||||||||||| |||||||| ||||| ||||| ||||| || || |||||| | | ||| ||||| ||| |||| ||||||||| ||| ||| || | |
|
|
| T |
4568210 |
ttctccacctcctctctcttcacatttgtatcaatttcgattccgatctccaacttattacaaatatatctgcagtatgttggctgctcagaaaaaaaag |
4568309 |
T |
|
| Q |
136 |
gccaacacaacattggaactccagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaacttt |
235 |
Q |
| |
|
||||||| |||||||| |||| ||||| || ||||| || ||||||||||| |||||||||||||||| || | ||||||||||||||| |||| |
|
|
| T |
4568310 |
gccaacataacattggtactctggcacaaatgctttccaatgtggagttccatccacaatgagtcaagaatcgtccaactgaagggtggttcaacacttg |
4568409 |
T |
|
| Q |
236 |
ctcctgtggacaccaacttgc |
256 |
Q |
| |
|
||| || |||||||| ||||| |
|
|
| T |
4568410 |
ctcttgcggacaccagcttgc |
4568430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 4299673 - 4299607
Alignment:
| Q |
162 |
catatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttca |
228 |
Q |
| |
|
||||| |||||| |||||||||||||||| || |||||||||||||| || |||||||||||||||| |
|
|
| T |
4299673 |
catatgctttcaatggttgagttccatccacagtgagtcaagaatccaccaattgaagggtggttca |
4299607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 4299743 - 4299671
Alignment:
| Q |
17 |
catcaattcattgacaagtttctccacctcttctctctttacattcgtatcgatttccatcccaatctcccat |
89 |
Q |
| |
|
|||||||||||||| || || |||||||| |||||| | ||||| ||||||||||| || |||||||||||| |
|
|
| T |
4299743 |
catcaattcattgatcagcttttccacctcctctctcctcacatttgtatcgatttcgattccaatctcccat |
4299671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 256
Target Start/End: Complemental strand, 4391996 - 4391885
Alignment:
| Q |
145 |
acattggaactccagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcctgtgg |
244 |
Q |
| |
|
|||||||||||| || ||| || |||||| ||| |||||| ||||| ||||| || |||||||| | ||| ||||||||||||| |||| ||| | || |
|
|
| T |
4391996 |
acattggaactctagaacaaatgctttcaatgggtgagtttcatccacaatgcgttaagaatccacaaattcaagggtggttcaatacttgctctttcgg |
4391897 |
T |
|
| Q |
245 |
acaccaacttgc |
256 |
Q |
| |
|
|||||| ||||| |
|
|
| T |
4391896 |
acaccatcttgc |
4391885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 149; Significance: 9e-79; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 40 - 256
Target Start/End: Original strand, 1281272 - 1281488
Alignment:
| Q |
40 |
ccacctcttctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagtttgttggctgatcaccaaagaatggcca |
139 |
Q |
| |
|
||||||| |||||||| ||||| |||||||||||||| ||||||| ||||||||| |||||| |||||||| ||||||||||||| |||| |||||||| |
|
|
| T |
1281272 |
ccacctcctctctcttcacatttgtatcgatttccataccaatcttccattcattacaaataaatctacagtctgttggctgatcagcaaaaaatggcca |
1281371 |
T |
|
| Q |
140 |
acacaacattggaactccagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcc |
239 |
Q |
| |
|
|||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||| |
|
|
| T |
1281372 |
acacaacattggcactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgattgaagggtggttcaacactttctct |
1281471 |
T |
|
| Q |
240 |
tgtggacaccaacttgc |
256 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
1281472 |
tgtggacaccaacttgc |
1281488 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 144; Significance: 8e-76; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 17 - 256
Target Start/End: Original strand, 24103134 - 24103373
Alignment:
| Q |
17 |
catcaattcattgacaagtttctccacctcttctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagtttgtt |
116 |
Q |
| |
|
||||||||||||||| | ||||| || || |||||||| ||||| ||||||||||| | |||||||||||||||| | |||||| ||||||||||||| |
|
|
| T |
24103134 |
catcaattcattgactaacttctcgacgtcatctctcttcacatttgtatcgatttcgagtccaatctcccattcatagcaaataaatctacagtttgtt |
24103233 |
T |
|
| Q |
117 |
ggctgatcaccaaagaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattg |
216 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || || | |
|
|
| T |
24103234 |
ggttgatcaccaaagaatggccaacacaacattggcactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccaatcg |
24103333 |
T |
|
| Q |
217 |
aagggtggttcaaaactttctcctgtggacaccaacttgc |
256 |
Q |
| |
|
|||||||||| || ||||| || ||||||||||||||||| |
|
|
| T |
24103334 |
aagggtggtttaacactttatcttgtggacaccaacttgc |
24103373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 28000096 - 27999862
Alignment:
| Q |
17 |
catcaattcattgacaagtttctccacctcttctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagtttgtt |
116 |
Q |
| |
|
|||||||||||||| ||| ||||||| || ||| |||| |||||| |||| |||||||| ||||||| ||||||||| |||||| ||||||||||||| |
|
|
| T |
28000096 |
catcaattcattgataagcttctccaaatcctctatcttcacattcatatcaatttccataccaatcttccattcattacaaataaatctacagtttgtt |
27999997 |
T |
|
| Q |
117 |
ggctgatcaccaaagaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattg |
216 |
Q |
| |
|
||||||||| |||| |||| ||||||||||||||| |||||||| ||||| ||||| |||||||||||||||||||| ||||||||||| |||| |||| |
|
|
| T |
27999996 |
ggctgatcagcaaaaaatgaccaacacaacattggcactccagcgcatatgctttcggtggttgagttccatccgcagtgagtcaagaacccgctgattg |
27999897 |
T |
|
| Q |
217 |
aagggtggttcaaaactttctcctgtggacaccaa |
251 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||| |
|
|
| T |
27999896 |
aagggtggttcaaaactttctcttgtggacaccaa |
27999862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 143; Significance: 3e-75; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 1674361 - 1674595
Alignment:
| Q |
17 |
catcaattcattgacaagtttctccacctcttctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagtttgtt |
116 |
Q |
| |
|
|||||||||||||| ||| ||||||| | |||||||| ||||||||||| |||||||| ||||||| ||||||||| |||||| ||||||||||||| |
|
|
| T |
1674361 |
catcaattcattgataagcttctccaaaccctctctcttcacattcgtatcaatttccataccaatcttccattcattacaaataaatctacagtttgtt |
1674460 |
T |
|
| Q |
117 |
ggctgatcaccaaagaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattg |
216 |
Q |
| |
|
||||||||| |||| |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || |||||||||||||| |||| |
|
|
| T |
1674461 |
ggctgatcagcaaaaaatggccaacacaacattggcactccagcgcatatgctttcagtggttgagttccatccgcagtgtgtcaagaatccgccgattg |
1674560 |
T |
|
| Q |
217 |
aagggtggttcaaaactttctcctgtggacaccaa |
251 |
Q |
| |
|
||||||||||||| |||||||| |||||||||||| |
|
|
| T |
1674561 |
aagggtggttcaacactttctcttgtggacaccaa |
1674595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 17 - 226
Target Start/End: Complemental strand, 16686264 - 16686055
Alignment:
| Q |
17 |
catcaattcattgacaagtttctccacctcttctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagtttgtt |
116 |
Q |
| |
|
||||||||||||||| | |||||||||||| |||||||| ||||| || || |||||||| |||||||||||||||||| ||||| ||| || |||| | |
|
|
| T |
16686264 |
catcaattcattgaccaatttctccacctcatctctcttcacattggtgtcaatttccatgccaatctcccattcattgcaaatatatctgcattttgct |
16686165 |
T |
|
| Q |
117 |
ggctgatcaccaaagaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattg |
216 |
Q |
| |
|
||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||| || |||| |
|
|
| T |
16686164 |
ggctgatcagcaaaaaatggccaacacaacattggaactccagcatatatactttcagtggttgagttccatccacaatgagttaagaatccaccgattg |
16686065 |
T |
|
| Q |
217 |
aagggtggtt |
226 |
Q |
| |
|
|||| ||||| |
|
|
| T |
16686064 |
aaggatggtt |
16686055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 17 - 253
Target Start/End: Complemental strand, 20863840 - 20863604
Alignment:
| Q |
17 |
catcaattcattgacaagtttctccacctcttctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagtttgtt |
116 |
Q |
| |
|
|||||||||||| || || |||||||||| |||||||| ||||| || || ||||| |||||||||||||||| ||| |||| ||| |||||||| |
|
|
| T |
20863840 |
catcaattcatttaccagcatctccacctcctctctcttgacattggtgtcaatttcgatcccaatctcccatttgttgcaaatgtatctgcagtttgtc |
20863741 |
T |
|
| Q |
117 |
ggctgatcaccaaagaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattg |
216 |
Q |
| |
|
||||||||| |||| |||||||| ||||||||||| |||||||||||||| || ||| |||||||||||||||| |||||||| | ||||| || |||| |
|
|
| T |
20863740 |
ggctgatcagcaaaaaatggccagcacaacattggcactccagcacatatgctctcaatggttgagttccatccacaatgagttagaaatccaccaattg |
20863641 |
T |
|
| Q |
217 |
aagggtggttcaaaactttctcctgtggacaccaact |
253 |
Q |
| |
|
|||| |||||||| || ||||| |||||||||||||| |
|
|
| T |
20863640 |
aaggatggttcaacaccttctcttgtggacaccaact |
20863604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 129; Significance: 7e-67; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 19 - 255
Target Start/End: Complemental strand, 3714 - 3478
Alignment:
| Q |
19 |
tcaattcattgacaagtttctccacctcttctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagtttgttgg |
118 |
Q |
| |
|
||||||||||||| || ||||||||||| |||||||| |||| | |||||||||| | |||||||||||||| ||| |||||| ||||||||||||||| |
|
|
| T |
3714 |
tcaattcattgactagcttctccacctcatctctcttcacatccatatcgatttcaagtccaatctcccattcgttgcaaataaatctacagtttgttgg |
3615 |
T |
|
| Q |
119 |
ctgatcaccaaagaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaa |
218 |
Q |
| |
|
|||||||||||||||||||||||| | |||||| |||||||| ||||| |||||||||||||| |||||||| ||||||||||||||||| || |||||| |
|
|
| T |
3614 |
ctgatcaccaaagaatggccaacaaagcattggtactccagcgcatatgctttcagtggttgaattccatccacaatgagtcaagaatccaccaattgaa |
3515 |
T |
|
| Q |
219 |
gggtggttcaaaactttctcctgtggacaccaacttg |
255 |
Q |
| |
|
|||||| ||| |||| ||| ||||||||||| |||| |
|
|
| T |
3514 |
gggtggatcagtacttgctcttgtggacaccagcttg |
3478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 17 - 256
Target Start/End: Original strand, 3086555 - 3086794
Alignment:
| Q |
17 |
catcaattcattgacaagtttctccacctcttctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagtttgtt |
116 |
Q |
| |
|
|||||||||||||| || ||||| ||||| |||||||| ||||| ||||||||||| || |||||||||||| |||| | ||| |||||||||| || |
|
|
| T |
3086555 |
catcaattcattgatcagcttctcgacctcctctctcttcacattagtatcgatttcaattccaatctcccatatattgcagatatatctacagtttatt |
3086654 |
T |
|
| Q |
117 |
ggctgatcaccaaagaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattg |
216 |
Q |
| |
|
|| ||||| ||| | |||||||||||||||||||| ||||||||| || |||||| |||||||||||||| ||||||||||||||||| || |||| |
|
|
| T |
3086655 |
ggttgatctccataaaatggccaacacaacattggcactccagcaagtacgctttcaaccgttgagttccatccacaatgagtcaagaatccaccaattg |
3086754 |
T |
|
| Q |
217 |
aagggtggttcaaaactttctcctgtggacaccaacttgc |
256 |
Q |
| |
|
||||||| ||||| |||| ||| || |||||||| ||||| |
|
|
| T |
3086755 |
aagggtgattcaatacttgctcttgcggacaccagcttgc |
3086794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 48 - 260
Target Start/End: Complemental strand, 4652 - 4440
Alignment:
| Q |
48 |
tctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagtttgttggctgatcaccaaagaatggccaacacaaca |
147 |
Q |
| |
|
|||||||| ||||| ||||| |||||||| ||| |||||||| || | | ||| | | |||||||||||||||| | || |||||||||||||||| |
|
|
| T |
4652 |
tctctcttcacattagtatcaatttccataccagtctcccatatatgggagatataccgatagtttgttggctgatcggcgaaaaatggccaacacaaca |
4553 |
T |
|
| Q |
148 |
ttggaactccagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcctgtggaca |
247 |
Q |
| |
|
|||| ||||| ||||||| |||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||| |||| ||| |||||||| |
|
|
| T |
4552 |
ttggcactcctacacatatgctttcaatggttgagttccatccgcaatgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgtggaca |
4453 |
T |
|
| Q |
248 |
ccaacttgcaatt |
260 |
Q |
| |
|
||| || |||||| |
|
|
| T |
4452 |
ccagctcgcaatt |
4440 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 30 - 256
Target Start/End: Complemental strand, 3668 - 3443
Alignment:
| Q |
30 |
acaagtttctccacctcttctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagtttgttggctgatcaccaa |
129 |
Q |
| |
|
||||||||||||||||| |||||||| ||||| | ||| ||||| | ||||||||||||||||| |||| |||||||||||||| || || | |
|
|
| T |
3668 |
acaagtttctccacctcctctctcttcacattggaatctatttcacttccaatctcccattcattccaaatgcatctacagtttgttgagtgttcgggga |
3569 |
T |
|
| Q |
130 |
agaatggccaacacaacattggaactccagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaa |
229 |
Q |
| |
|
| |||||||||| || |||||||||||||| ||| || |||||| |||||||||||||||| |||||||| |||||||| || | | ||||||||||||| |
|
|
| T |
3568 |
aaaatggccaacgcagcattggaactccagaacaaatgctttcaatggttgagttccatccacaatgagttaagaatccaccaact-aagggtggttcaa |
3470 |
T |
|
| Q |
230 |
aactttctcctgtggacaccaacttgc |
256 |
Q |
| |
|
|||| ||| | |||||||| ||||| |
|
|
| T |
3469 |
cacttgctcttacggacaccatcttgc |
3443 |
T |
|
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