View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8151_low_9 (Length: 218)
Name: NF8151_low_9
Description: NF8151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8151_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 175; Significance: 2e-94; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 9 - 207
Target Start/End: Original strand, 17734464 - 17734662
Alignment:
| Q |
9 |
acatcaccaaacacttattatccaatcaaaaactcaatgaaaagaacgttgtgttttcaccattatcgctcaacaccgtactcattatgatcactaccgg |
108 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
17734464 |
acatcaccaaacacttgttatccaatcaaaaactcaatgaaaagaacgttgtgttttcaccattatcgctcaacaccgtactcattatgatcactgccgg |
17734563 |
T |
|
| Q |
109 |
ctccgagggtcccgcacaaaaccaacttctcttcttcctccagtctgaatccatcggtgatctcaaatccttatgctctcagcttgtttcttctctgct |
207 |
Q |
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||||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
17734564 |
ctccgagggtcccacacaaaaccaacttctctccttcctccagtctgaatccaccggtgatctcaaatccttatgctctcagcttgtttcttctgtgct |
17734662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 9 - 207
Target Start/End: Original strand, 17743704 - 17743902
Alignment:
| Q |
9 |
acatcaccaaacacttattatccaatcaaaaactcaatgaaaagaacgttgtgttttcaccattatcgctcaacaccgtactcattatgatcactaccgg |
108 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
17743704 |
acatcaccaaacacttgttatccaatcaaaaactcaatgaaaagaacattgtgttttcaccattatcgctcaacaccgtactcattatgatcgctaccgg |
17743803 |
T |
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| Q |
109 |
ctccgagggtcccgcacaaaaccaacttctcttcttcctccagtctgaatccatcggtgatctcaaatccttatgctctcagcttgtttcttctctgct |
207 |
Q |
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||||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||| |||| |
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| T |
17743804 |
ctccgagggtcccacacaaaaccaacttctctccttcctccagtctgaatccaccggtgatctcaaatcgttatgctctcaggttgtttcttctgtgct |
17743902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 9 - 207
Target Start/End: Original strand, 16720480 - 16720678
Alignment:
| Q |
9 |
acatcaccaaacacttattatccaatcaaaaactcaatgaaaagaacgttgtgttttcaccattatcgctcaacaccgtactcattatgatcactaccgg |
108 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||| |||| |||||| ||||||| |
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| T |
16720480 |
acatcaccaaacacttgttatccaatcaaaaactcaaagaagagaacgttgtgttttcaccattatcgcttaacaccgtgctcagtatgattgctaccgg |
16720579 |
T |
|
| Q |
109 |
ctccgagggtcccgcacaaaaccaacttctcttcttcctccagtctgaatccatcggtgatctcaaatccttatgctctcagcttgtttcttctctgct |
207 |
Q |
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||||||||||||| | ||||| |||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
16720580 |
ctccgagggtcccactcaaaaacaacttctctcctttctccagtctgaatccaccggtgatctcaaatccttatgctctcagcttgtttcttctgtgct |
16720678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 9 - 207
Target Start/End: Original strand, 17697494 - 17697692
Alignment:
| Q |
9 |
acatcaccaaacacttattatccaatcaaaaactcaatgaaaagaacgttgtgttttcaccattatcgctcaacaccgtactcattatgatcactaccgg |
108 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||| |||| |||||| ||||||| |
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| T |
17697494 |
acatcaccaaacacttgttatccaatcaaaaactcaaagaagagaacgttgtgttttcaccattatcgcttaacaccgtgctcagtatgattgctaccgg |
17697593 |
T |
|
| Q |
109 |
ctccgagggtcccgcacaaaaccaacttctcttcttcctccagtctgaatccatcggtgatctcaaatccttatgctctcagcttgtttcttctctgct |
207 |
Q |
| |
|
||||||||||||| | ||||| |||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
17697594 |
ctccgagggtcccactcaaaaacaacttctctcctttctccagtctgaatccaccggtgatctcaaatccttatgctctcagcttgtttcttctgtgct |
17697692 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 9 - 207
Target Start/End: Original strand, 17716413 - 17716611
Alignment:
| Q |
9 |
acatcaccaaacacttattatccaatcaaaaactcaatgaaaagaacgttgtgttttcaccattatcgctcaacaccgtactcattatgatcactaccgg |
108 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||| ||||||| ||||||| |
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| T |
17716413 |
acatcaccaaacacttgttatccaatcaaaaactcaaagaaaagaatgttgtgttttcaccattatcgctcaacaccgtgctcagtatgatcgctaccgg |
17716512 |
T |
|
| Q |
109 |
ctccgagggtcccgcacaaaaccaacttctcttcttcctccagtctgaatccatcggtgatctcaaatccttatgctctcagcttgtttcttctctgct |
207 |
Q |
| |
|
||||||||||||| | ||||| |||||||||| |||||||||||| |||||| |||| ||||||||||||||| ||||| ||| ||||||||| |||| |
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| T |
17716513 |
ctccgagggtcccactcaaaaacaacttctctccttcctccagtcagaatcccccggtaatctcaaatccttatactctcggctggtttcttctgtgct |
17716611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 9 - 207
Target Start/End: Original strand, 16729353 - 16729551
Alignment:
| Q |
9 |
acatcaccaaacacttattatccaatcaaaaactcaatgaaaagaacgttgtgttttcaccattatcgctcaacaccgtactcattatgatcactaccgg |
108 |
Q |
| |
|
|||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||| | |
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|
| T |
16729353 |
acatcaccaaacacttgttatccaatcaagaactcaaagaaaagaacgttgtgttttcaccattatcgctcaacaccgtgctcagtatgatcgctaccag |
16729452 |
T |
|
| Q |
109 |
ctccgagggtcccgcacaaaaccaacttctcttcttcctccagtctgaatccatcggtgatctcaaatccttatgctctcagcttgtttcttctctgct |
207 |
Q |
| |
|
|||| |||||||| | ||||| |||||||||| |||||||||||||||||| |||||||||||||||||||| ||||| ||| ||||||||| |||| |
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| T |
16729453 |
ctccaagggtcccactcaaaaacaacttctctccttcctccagtctgaatctcccggtgatctcaaatccttatactctcggctggtttcttctgtgct |
16729551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 9 - 207
Target Start/End: Original strand, 17706425 - 17706623
Alignment:
| Q |
9 |
acatcaccaaacacttattatccaatcaaaaactcaatgaaaagaacgttgtgttttcaccattatcgctcaacaccgtactcattatgatcactaccgg |
108 |
Q |
| |
|
|||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||| | |
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| T |
17706425 |
acatcaccaaacacttgttatccaatcaagaactcaaagaaaagaacgttgtgttttcaccattatcgctcaacaccgtgctcagtatgatcgctaccag |
17706524 |
T |
|
| Q |
109 |
ctccgagggtcccgcacaaaaccaacttctcttcttcctccagtctgaatccatcggtgatctcaaatccttatgctctcagcttgtttcttctctgct |
207 |
Q |
| |
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|||| |||||||| | ||||| |||||||||| |||||||||||||||||| |||||||||||||||||||| ||||| ||| ||||||||| |||| |
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| T |
17706525 |
ctccaagggtcccactcaaaaacaacttctctccttcctccagtctgaatctcccggtgatctcaaatccttatactctcggctggtttcttctgtgct |
17706623 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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