View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8154_low_2 (Length: 376)

Name: NF8154_low_2
Description: NF8154
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8154_low_2
NF8154_low_2
[»] chr8 (7 HSPs)
chr8 (22-165)||(40462392-40462535)
chr8 (22-95)||(26521860-26521933)
chr8 (116-165)||(9755888-9755937)
chr8 (22-62)||(9755806-9755846)
chr8 (22-58)||(34315067-34315103)
chr8 (121-165)||(38974602-38974646)
chr8 (121-165)||(39005700-39005744)
[»] chr3 (8 HSPs)
chr3 (22-95)||(11151452-11151525)
chr3 (24-95)||(34825709-34825780)
chr3 (116-165)||(11151382-11151431)
chr3 (22-62)||(36437336-36437376)
chr3 (116-165)||(39606426-39606475)
chr3 (116-165)||(54673436-54673485)
chr3 (22-92)||(48537982-48538052)
chr3 (22-95)||(46652788-46652861)
[»] chr1 (7 HSPs)
chr1 (22-95)||(24304169-24304242)
chr1 (22-87)||(51676203-51676268)
chr1 (22-62)||(35712575-35712615)
chr1 (116-165)||(24304098-24304148)
chr1 (116-165)||(13970785-13970834)
chr1 (116-165)||(51676134-51676183)
chr1 (24-61)||(13970072-13970109)
[»] scaffold0262 (1 HSPs)
scaffold0262 (22-165)||(2880-3021)
[»] chr4 (9 HSPs)
chr4 (22-94)||(56083476-56083548)
chr4 (22-95)||(12862572-12862645)
chr4 (22-69)||(47863566-47863613)
chr4 (22-87)||(6658622-6658687)
chr4 (22-62)||(16312769-16312809)
chr4 (116-162)||(47863464-47863510)
chr4 (116-165)||(5169528-5169577)
chr4 (116-165)||(56083570-56083619)
chr4 (24-56)||(47378629-47378661)
[»] chr7 (1 HSPs)
chr7 (28-95)||(47578468-47578535)
[»] chr2 (1 HSPs)
chr2 (22-95)||(29043481-29043554)
[»] chr5 (1 HSPs)
chr5 (22-62)||(27491167-27491207)
[»] chr6 (1 HSPs)
chr6 (22-61)||(5859020-5859059)


Alignment Details
Target: chr8 (Bit Score: 64; Significance: 7e-28; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 22 - 165
Target Start/End: Original strand, 40462392 - 40462535
Alignment:
Q  22 tctgactggattaatgagctgatgtggcacgctgactgtgtgatgatgagtgaagtggcactgacatgtcataannnnnnnnnnnnnnnnnnnnaaaagt 121  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||  ||||||                    ||||||    
T  40462392 tctgactggattaatgagctgatgtggcacgctgactgtgcaatgatgagtgaagtggcactgacacatcataatttttaaatcttttatttttaaaagt 40462491  T
Q  122 atgttaaaaatctgaaatccccaaaatacccctaatgataaatt 165  Q
    ||||||||||||||||| ||||||||||||||||||||||||||    
T  40462492 atgttaaaaatctgaaacccccaaaatacccctaatgataaatt 40462535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 26521933 - 26521860
Alignment:
Q  22 tctgactggattaatgagctgatgtggcacgctgactgtgtgatgatgagtgaagtggcactgacatgtcataa 95  Q
    |||||||||||||||||||||||||||||||||||||||||  | ||  ||||| ||||| ||||| |||||||    
T  26521933 tctgactggattaatgagctgatgtggcacgctgactgtgtagtaattggtgaaatggcattgacacgtcataa 26521860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 9755888 - 9755937
Alignment:
Q  116 aaaagtatgttaaaaatctgaaatccccaaaatacccctaatgataaatt 165  Q
    ||||||||||||||||| |||||| || ||||||||| ||||||||||||    
T  9755888 aaaagtatgttaaaaatgtgaaataccaaaaatacccttaatgataaatt 9755937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 9755806 - 9755846
Alignment:
Q  22 tctgactggattaatgagctgatgtggcacgctgactgtgt 62  Q
    |||||||||||||||||| |||||| |||||||||||||||    
T  9755806 tctgactggattaatgagttgatgtagcacgctgactgtgt 9755846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 34315103 - 34315067
Alignment:
Q  22 tctgactggattaatgagctgatgtggcacgctgact 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  34315103 tctgactggattaataagctgatgtggcacgctgact 34315067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 165
Target Start/End: Complemental strand, 38974646 - 38974602
Alignment:
Q  121 tatgttaaaaatctgaaatccccaaaatacccctaatgataaatt 165  Q
    |||||||||||| ||||||  | ||||||||||||||||||||||    
T  38974646 tatgttaaaaatgtgaaatatctaaaatacccctaatgataaatt 38974602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 165
Target Start/End: Complemental strand, 39005744 - 39005700
Alignment:
Q  121 tatgttaaaaatctgaaatccccaaaatacccctaatgataaatt 165  Q
    |||||||||||| ||||||  | ||||||||||||||||||||||    
T  39005744 tatgttaaaaatgtgaaatatctaaaatacccctaatgataaatt 39005700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 3e-24; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 11151525 - 11151452
Alignment:
Q  22 tctgactggattaatgagctgatgtggcacgctgactgtgtgatgatgagtgaagtggcactgacatgtcataa 95  Q
    |||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||    
T  11151525 tctgactggattcatgagctgatgtggcacgttaactgtgtgatgatgagtgaagtggcactgacacgtcataa 11151452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 34825709 - 34825780
Alignment:
Q  24 tgactggattaatgagctgatgtggcacgctgactgtgtgatgatgagtgaagtggcactgacatgtcataa 95  Q
    ||||||||||||||||||||||||||||||||||||| |  | ||  ||||| ||||||||||| |||||||    
T  34825709 tgactggattaatgagctgatgtggcacgctgactgtatagtaattggtgaaatggcactgacacgtcataa 34825780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 165
Target Start/End: Complemental strand, 11151431 - 11151382
Alignment:
Q  116 aaaagtatgttaaaaatctgaaatccccaaaatacccctaatgataaatt 165  Q
    ||||||||||||||||| |||||| |||||||||||| ||||||||||||    
T  11151431 aaaagtatgttaaaaatgtgaaatacccaaaatacccataatgataaatt 11151382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 36437336 - 36437376
Alignment:
Q  22 tctgactggattaatgagctgatgtggcacgctgactgtgt 62  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  36437336 tctgactggattaatgagatgatgtggcacgctgactgtgt 36437376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 165
Target Start/End: Complemental strand, 39606475 - 39606426
Alignment:
Q  116 aaaagtatgttaaaaatctgaaatccccaaaatacccctaatgataaatt 165  Q
    |||| |||||||||||| |||||| || ||||||||||||||||||||||    
T  39606475 aaaattatgttaaaaatgtgaaatacctaaaatacccctaatgataaatt 39606426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 165
Target Start/End: Complemental strand, 54673485 - 54673436
Alignment:
Q  116 aaaagtatgttaaaaatctgaaatccccaaaatacccctaatgataaatt 165  Q
    |||| |||||||||||| |||||| || ||||||||||||||||||||||    
T  54673485 aaaattatgttaaaaatgtgaaatacctaaaatacccctaatgataaatt 54673436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 92
Target Start/End: Original strand, 48537982 - 48538052
Alignment:
Q  22 tctgactggattaatgagctgatgtggcacgctgactgtgtgatgatgagtgaagtggcactgacatgtca 92  Q
    ||||||||||| |||  | |||| ||||| ||||||||||| ||||||  |||||||||||||||| ||||    
T  48537982 tctgactggataaatttgatgatttggcatgctgactgtgtaatgatggctgaagtggcactgacacgtca 48538052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 46652861 - 46652788
Alignment:
Q  22 tctgactggattaatgagctgatgtggcacgctgactgtgtgatgatgagtgaagtggcactgacatgtcataa 95  Q
    |||||||||||||||||| |||||||| ||| |||||||||  | ||  ||||| || |||||||| |||||||    
T  46652861 tctgactggattaatgagttgatgtggtacgttgactgtgtagtaataggtgaaatgacactgacacgtcataa 46652788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 3e-24; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 24304242 - 24304169
Alignment:
Q  22 tctgactggattaatgagctgatgtggcacgctgactgtgtgatgatgagtgaagtggcactgacatgtcataa 95  Q
    ||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  24304242 tctgattggattaatgaattgatgtggcacgctgactgtgtgatgatgagtgaagtggcactgacacgtcataa 24304169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 51676268 - 51676203
Alignment:
Q  22 tctgactggattaatgagctgatgtggcacgctgactgtgtgatgatgagtgaagtggcactgaca 87  Q
    |||||||||||||||||  ||||||||||||||||||||||  ||||||||||||||||| |||||    
T  51676268 tctgactggattaatgaattgatgtggcacgctgactgtgtagtgatgagtgaagtggcaatgaca 51676203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 35712575 - 35712615
Alignment:
Q  22 tctgactggattaatgagctgatgtggcacgctgactgtgt 62  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  35712575 tctgactggattaatgagctgatgtgacacgctgactgtgt 35712615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 165
Target Start/End: Complemental strand, 24304148 - 24304098
Alignment:
Q  116 aaaagtatgttaaaaatctgaaatccccaaaatacccctaa-tgataaatt 165  Q
    ||||||||||||||||| |||||| |||||||||||||||| |||||||||    
T  24304148 aaaagtatgttaaaaatgtgaaatacccaaaatacccctaattgataaatt 24304098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 165
Target Start/End: Complemental strand, 13970834 - 13970785
Alignment:
Q  116 aaaagtatgttaaaaatctgaaatccccaaaatacccctaatgataaatt 165  Q
    |||| |||||||||||| |||||| || ||||||||||||||||||||||    
T  13970834 aaaattatgttaaaaatgtgaaatacctaaaatacccctaatgataaatt 13970785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 165
Target Start/End: Complemental strand, 51676183 - 51676134
Alignment:
Q  116 aaaagtatgttaaaaatctgaaatccccaaaatacccctaatgataaatt 165  Q
    ||||||||||||||||| |||||| || ||||||||| ||||||||||||    
T  51676183 aaaagtatgttaaaaatgtgaaatacctaaaatacccttaatgataaatt 51676134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 13970072 - 13970109
Alignment:
Q  24 tgactggattaatgagctgatgtggcacgctgactgtg 61  Q
    |||||||||||||||| |||||||||||||||| ||||    
T  13970072 tgactggattaatgagatgatgtggcacgctgattgtg 13970109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 22 - 165
Target Start/End: Original strand, 2880 - 3021
Alignment:
Q  22 tctgactggattaatgagctgatgtggcacgctgactgtgtgatgatgagtgaagtggcactgacatgtcataannnnnnnnnnnnnnnnnnnnaaaagt 121  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||| |||||||                    ||||||    
T  2880 tctgactggattaatgagctgatgtggcatgctgactgtgcgatgatgagtgaagtggc-ctgacacgtcataatttttaaatcttttatttttaaaagt 2978  T
Q  122 atgttaaaaatctgaaatccccaaaatacccctaatgataaatt 165  Q
    ||||||||||||||||| ||||||||||||||||||||||||||    
T  2979 atgttaaaaatctgaaa-ccccaaaatacccctaatgataaatt 3021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 56083476 - 56083548
Alignment:
Q  22 tctgactggattaatgagctgatgtggcacgctgactgtgtgatgatgagtgaagtggcactgacatgtcata 94  Q
    |||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||| |||||| |||||    
T  56083476 tctgactggattaatgagttgatgtggcacgctgactgtgtagtgatgagtgaagtggcattgacatatcata 56083548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 12862645 - 12862572
Alignment:
Q  22 tctgactggattaatgagctgatgtggcacgctgactgtgtgatgatgagtgaagtggcactgacatgtcataa 95  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||  |||| ||||||||||| |||||||    
T  12862645 tctgactggattaatgagctgatgtggcacgctgactgtgtagtgatggatgaaatggcactgacacgtcataa 12862572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 47863613 - 47863566
Alignment:
Q  22 tctgactggattaatgagctgatgtggcacgctgactgtgtgatgatg 69  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  47863613 tctgactggattaatgagctgatgtggcacgctaactgtgtgatgatg 47863566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 22 - 87
Target Start/End: Complemental strand, 6658687 - 6658622
Alignment:
Q  22 tctgactggattaatgagctgatgtggcacgctgactgtgtgatgatgagtgaagtggcactgaca 87  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||  |||| || ||||||||    
T  6658687 tctgactggattaatgagctgatgtggcacgctgactgtgtagtgatggatgaaatgacactgaca 6658622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 16312769 - 16312809
Alignment:
Q  22 tctgactggattaatgagctgatgtggcacgctgactgtgt 62  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  16312769 tctgactggattaatgagatgatgtggcacgctgactgtgt 16312809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 162
Target Start/End: Complemental strand, 47863510 - 47863464
Alignment:
Q  116 aaaagtatgttaaaaatctgaaatccccaaaatacccctaatgataa 162  Q
    ||||||||||||||||| |||||| |||||||||||||| |||||||    
T  47863510 aaaagtatgttaaaaatgtgaaatacccaaaataccccttatgataa 47863464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 5169528 - 5169577
Alignment:
Q  116 aaaagtatgttaaaaatctgaaatccccaaaatacccctaatgataaatt 165  Q
    |||| |||||||||||| |||||| || ||||||||||||||||||||||    
T  5169528 aaaattatgttaaaaatgtgaaatacctaaaatacccctaatgataaatt 5169577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 56083570 - 56083619
Alignment:
Q  116 aaaagtatgttaaaaatctgaaatccccaaaatacccctaatgataaatt 165  Q
    ||||||||||||||||| |||||| || ||||||||| ||||||||||||    
T  56083570 aaaagtatgttaaaaatgtgaaataccaaaaatacccttaatgataaatt 56083619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 56
Target Start/End: Complemental strand, 47378661 - 47378629
Alignment:
Q  24 tgactggattaatgagctgatgtggcacgctga 56  Q
    |||||||||||||||| ||||||||||||||||    
T  47378661 tgactggattaatgagatgatgtggcacgctga 47378629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 28 - 95
Target Start/End: Complemental strand, 47578535 - 47578468
Alignment:
Q  28 tggattaatgagctgatgtggcacgctgactgtgtgatgatgagtgaagtggcactgacatgtcataa 95  Q
    |||||||||||||||||||||||||||||||||||  ||||| ||||| ||||| ||||| |||||||    
T  47578535 tggattaatgagctgatgtggcacgctgactgtgtagtgatgggtgaaatggcaatgacacgtcataa 47578468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 29043554 - 29043481
Alignment:
Q  22 tctgactggattaatgagctgatgtggcacgctgactgtgtgatgatgagtgaagtggcactgacatgtcataa 95  Q
    ||||||||||||||||||||||||||||||||||| |||||  | |||  |||| ||||||||||| |||||||    
T  29043554 tctgactggattaatgagctgatgtggcacgctgattgtgtagtaatggatgaaatggcactgacacgtcataa 29043481  T

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Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 27491207 - 27491167
Alignment:
Q  22 tctgactggattaatgagctgatgtggcacgctgactgtgt 62  Q
    ||||||||||| ||||||||||||||||||||| |||||||    
T  27491207 tctgactggatcaatgagctgatgtggcacgctaactgtgt 27491167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 5859020 - 5859059
Alignment:
Q  22 tctgactggattaatgagctgatgtggcacgctgactgtg 61  Q
    ||||| |||||||||||| |||||||||||||||||||||    
T  5859020 tctgattggattaatgagatgatgtggcacgctgactgtg 5859059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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