View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8156_low_3 (Length: 289)
Name: NF8156_low_3
Description: NF8156
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8156_low_3 |
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Alignment Details
Target: chr2 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 14459518 - 14459249
Alignment:
| Q |
1 |
gagtccagatgatactacaatgacacctaccttcaacaaatgttcaaatgatacttggactaaaccagaagtagacagtttaatgcttggattgtttata |
100 |
Q |
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| T |
14459518 |
gagtccagatgatactacaaagacacctaccttcaacaaatgttcaaatgatacttggactaaaccagaagtagacagtttaatgcttggattgtttata |
14459419 |
T |
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| Q |
101 |
tttggcaaaaacttttctcaactgaaaagatttattggtagcaagaccataggtgaagtacaatttttctactatgcaaaattctacaagtcagagaatc |
200 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14459418 |
tttggcaaaaacttttctcaactgaaaagattcattggtagcaagaccataggtgaagtacaatttttctactatgcaaaattctacaagtcagagaatc |
14459319 |
T |
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| Q |
201 |
atataaggtggcatgcatataagaaagcaataaaagataatgaaggtaagggaaaacttatgtcagaacc |
270 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14459318 |
atataaggtggcatgcatataagaaagcaataaaagataatgaaggtaagggaaaacttatgtcagaacc |
14459249 |
T |
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