View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8157_high_14 (Length: 254)
Name: NF8157_high_14
Description: NF8157
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8157_high_14 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 18 - 254
Target Start/End: Complemental strand, 39936022 - 39935786
Alignment:
| Q |
18 |
agatgtaaaaaatgttattgaaaaattgatctatctcacaaaaatgttgaaacaagagacagtacaagaataaagaataaatgggtgttagattagtaag |
117 |
Q |
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| T |
39936022 |
agatgtaaaaaatgttattgaaaaattgatctatctcacaaaaatgttgaaacaagagacagtacaagaataaagaataaatgggtgttagattagtaag |
39935923 |
T |
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| Q |
118 |
gattagttatagttagtgtagctgattaagtagaggggttatcacgtataaataggagaaatgaggattaagaaaacaaacaagtatattagatattgtg |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |
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| T |
39935922 |
gattagttatagttagtgtagctgattaagtagaggggttatcacgtataaataggagaaataaggattaagaaaacaaccaagtatattagatattgtg |
39935823 |
T |
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| Q |
218 |
cgtgaaaggcgatattatctttgaagtgaaaaagaac |
254 |
Q |
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| T |
39935822 |
cgtgaaaggcgatgttatctttgaagtgaaaaagaac |
39935786 |
T |
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