View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8157_high_3 (Length: 562)

Name: NF8157_high_3
Description: NF8157
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8157_high_3
NF8157_high_3
[»] chr1 (46 HSPs)
chr1 (259-546)||(10106067-10106354)
chr1 (259-546)||(13890777-13891065)
chr1 (259-546)||(38734240-38734527)
chr1 (290-524)||(26651031-26651266)
chr1 (287-492)||(5602322-5602528)
chr1 (290-492)||(14582094-14582297)
chr1 (295-528)||(19422735-19422973)
chr1 (290-402)||(39747153-39747265)
chr1 (287-398)||(11251105-11251216)
chr1 (287-398)||(36684707-36684818)
chr1 (287-398)||(37404408-37404519)
chr1 (287-398)||(37409529-37409640)
chr1 (287-395)||(34318219-34318327)
chr1 (287-398)||(3584593-3584704)
chr1 (287-398)||(27716435-27716546)
chr1 (295-398)||(5724979-5725082)
chr1 (287-398)||(5730097-5730208)
chr1 (317-398)||(48246675-48246756)
chr1 (290-379)||(11387841-11387930)
chr1 (287-428)||(41097914-41098055)
chr1 (295-390)||(51041463-51041557)
chr1 (295-390)||(10135455-10135551)
chr1 (295-390)||(23192817-23192913)
chr1 (295-390)||(40165979-40166075)
chr1 (310-379)||(27711319-27711388)
chr1 (295-390)||(19799013-19799109)
chr1 (299-390)||(33301180-33301272)
chr1 (295-390)||(16035607-16035703)
chr1 (295-390)||(16649613-16649708)
chr1 (295-390)||(18784549-18784644)
chr1 (295-390)||(47451225-47451321)
chr1 (295-390)||(47455386-47455482)
chr1 (295-390)||(10140088-10140184)
chr1 (295-390)||(12259995-12260091)
chr1 (295-401)||(33055038-33055144)
chr1 (295-368)||(3094113-3094187)
chr1 (295-344)||(25855170-25855219)
chr1 (295-374)||(26927738-26927818)
chr1 (297-387)||(39588370-39588461)
chr1 (290-366)||(8267853-8267931)
chr1 (295-358)||(4632958-4633022)
chr1 (295-390)||(25188272-25188368)
chr1 (307-393)||(12906166-12906251)
chr1 (295-325)||(16832100-16832130)
chr1 (307-396)||(33380915-33381004)
chr1 (307-390)||(2493818-2493901)
[»] chr5 (51 HSPs)
chr5 (259-546)||(7805035-7805322)
chr5 (259-546)||(14374099-14374386)
chr5 (259-546)||(13582533-13582822)
chr5 (259-528)||(24435731-24436000)
chr5 (287-398)||(17510050-17510161)
chr5 (287-398)||(24771349-24771460)
chr5 (287-398)||(36253818-36253929)
chr5 (287-398)||(42019565-42019676)
chr5 (287-398)||(17504945-17505056)
chr5 (295-398)||(41858593-41858696)
chr5 (295-398)||(24776804-24776910)
chr5 (295-390)||(1414051-1414146)
chr5 (295-398)||(41853548-41853651)
chr5 (287-398)||(26709094-26709207)
chr5 (287-398)||(26978828-26978941)
chr5 (295-390)||(37248795-37248891)
chr5 (295-390)||(26667271-26667367)
chr5 (295-390)||(26938868-26938964)
chr5 (295-390)||(29167973-29168069)
chr5 (295-390)||(556694-556790)
chr5 (295-390)||(561466-561562)
chr5 (295-390)||(12103024-12103120)
chr5 (295-390)||(36423636-36423732)
chr5 (295-390)||(36428708-36428804)
chr5 (295-390)||(36937511-36937607)
chr5 (295-390)||(36942265-36942361)
chr5 (287-428)||(31731535-31731676)
chr5 (287-390)||(28857853-28857958)
chr5 (295-390)||(7451757-7451853)
chr5 (295-390)||(32461549-32461645)
chr5 (295-390)||(39518409-39518505)
chr5 (295-390)||(39523048-39523144)
chr5 (295-390)||(42001433-42001529)
chr5 (287-428)||(21323928-21324069)
chr5 (295-390)||(6514601-6514697)
chr5 (295-390)||(10759820-10759915)
chr5 (295-390)||(12045139-12045235)
chr5 (295-390)||(12501899-12501995)
chr5 (295-394)||(13301482-13301581)
chr5 (295-390)||(41996664-41996760)
chr5 (294-390)||(12041932-12042029)
chr5 (295-390)||(3665931-3666027)
chr5 (295-390)||(12102831-12102927)
chr5 (295-388)||(40147894-40147988)
chr5 (306-390)||(35679875-35679960)
chr5 (295-390)||(37652830-37652926)
chr5 (295-390)||(41587160-41587256)
chr5 (290-390)||(31986721-31986822)
chr5 (295-390)||(6155419-6155515)
chr5 (295-336)||(20181118-20181159)
chr5 (346-390)||(37550032-37550076)
[»] chr4 (58 HSPs)
chr4 (259-546)||(653006-653295)
chr4 (295-528)||(10120670-10120904)
chr4 (279-455)||(8082962-8083139)
chr4 (287-398)||(8980277-8980388)
chr4 (287-398)||(8985397-8985508)
chr4 (287-398)||(13700502-13700613)
chr4 (287-398)||(21299825-21299936)
chr4 (287-398)||(21304945-21305056)
chr4 (287-398)||(36359286-36359397)
chr4 (287-398)||(39999061-39999172)
chr4 (287-398)||(40004019-40004130)
chr4 (287-398)||(54343195-54343306)
chr4 (287-398)||(54348349-54348460)
chr4 (287-398)||(54991478-54991589)
chr4 (290-398)||(36354171-36354279)
chr4 (287-398)||(41393237-41393348)
chr4 (287-398)||(51019365-51019476)
chr4 (287-398)||(53797621-53797732)
chr4 (287-478)||(24490023-24490216)
chr4 (287-398)||(13695151-13695262)
chr4 (287-398)||(13710661-13710771)
chr4 (287-398)||(47046299-47046410)
chr4 (296-398)||(9764013-9764115)
chr4 (295-390)||(5271419-5271515)
chr4 (295-390)||(13521992-13522088)
chr4 (295-390)||(16421028-16421124)
chr4 (295-390)||(31269033-31269129)
chr4 (295-390)||(31273520-31273616)
chr4 (295-390)||(37259877-37259973)
chr4 (295-390)||(37264564-37264660)
chr4 (280-390)||(10318779-10318890)
chr4 (295-390)||(12823895-12823991)
chr4 (295-390)||(31765885-31765981)
chr4 (295-390)||(8693710-8693806)
chr4 (295-390)||(33463356-33463452)
chr4 (287-401)||(34644549-34644664)
chr4 (297-390)||(31729387-31729481)
chr4 (301-405)||(30564399-30564504)
chr4 (295-390)||(5928219-5928315)
chr4 (295-428)||(3998019-3998152)
chr4 (287-365)||(34560489-34560568)
chr4 (295-389)||(42758756-42758851)
chr4 (287-368)||(39319623-39319705)
chr4 (295-390)||(33468973-33469069)
chr4 (295-390)||(51697916-51698012)
chr4 (295-390)||(55251719-55251814)
chr4 (306-390)||(8030476-8030561)
chr4 (310-401)||(17359546-17359638)
chr4 (295-390)||(32082091-32082186)
chr4 (295-372)||(13065786-13065864)
chr4 (297-390)||(19101978-19102072)
chr4 (287-368)||(41816776-41816858)
chr4 (295-390)||(2819843-2819939)
chr4 (295-362)||(51697001-51697069)
chr4 (295-325)||(32221163-32221193)
chr4 (318-390)||(16953107-16953180)
chr4 (295-331)||(12878238-12878274)
chr4 (295-390)||(47574624-47574720)
[»] chr8 (43 HSPs)
chr8 (259-546)||(19429979-19430266)
chr8 (259-546)||(19435481-19435768)
chr8 (259-546)||(19566128-19566415)
chr8 (259-546)||(19571630-19571917)
chr8 (259-528)||(33616587-33616857)
chr8 (19-254)||(5818940-5819177)
chr8 (290-528)||(31030523-31030763)
chr8 (259-437)||(13584316-13584500)
chr8 (287-398)||(32015692-32015803)
chr8 (287-396)||(42514368-42514477)
chr8 (287-398)||(17955781-17955892)
chr8 (287-398)||(21644073-21644184)
chr8 (287-398)||(24884704-24884816)
chr8 (295-398)||(43999222-43999325)
chr8 (295-390)||(31449866-31449962)
chr8 (295-390)||(38182237-38182333)
chr8 (295-390)||(44925923-44926019)
chr8 (295-390)||(15875668-15875764)
chr8 (295-390)||(19166633-19166729)
chr8 (295-390)||(40125885-40125981)
chr8 (287-341)||(32010530-32010584)
chr8 (295-390)||(17025934-17026030)
chr8 (295-390)||(17556426-17556522)
chr8 (295-390)||(18876367-18876462)
chr8 (295-390)||(24090626-24090722)
chr8 (295-390)||(33416546-33416642)
chr8 (295-388)||(1807471-1807565)
chr8 (295-390)||(43302718-43302815)
chr8 (295-390)||(34118465-34118561)
chr8 (295-390)||(36683578-36683674)
chr8 (295-401)||(37771711-37771817)
chr8 (295-366)||(34818722-34818794)
chr8 (297-390)||(1910969-1911063)
chr8 (295-388)||(28559656-28559750)
chr8 (295-344)||(40130733-40130782)
chr8 (295-390)||(2965629-2965725)
chr8 (295-390)||(17953873-17953969)
chr8 (290-368)||(25368014-25368093)
chr8 (295-368)||(4238337-4238411)
chr8 (295-368)||(4243076-4243150)
chr8 (295-390)||(42157872-42157967)
chr8 (295-325)||(15951587-15951617)
chr8 (346-390)||(29220315-29220359)
[»] chr3 (62 HSPs)
chr3 (259-546)||(13021991-13022279)
chr3 (259-528)||(53119492-53119762)
chr3 (287-525)||(33089207-33089446)
chr3 (290-528)||(20810367-20810606)
chr3 (279-449)||(38436932-38437102)
chr3 (295-501)||(26962059-26962267)
chr3 (287-398)||(3476938-3477049)
chr3 (287-398)||(17368711-17368822)
chr3 (287-398)||(20090654-20090765)
chr3 (287-398)||(20095779-20095890)
chr3 (287-391)||(54270636-54270740)
chr3 (287-398)||(15763022-15763133)
chr3 (287-398)||(34129161-34129272)
chr3 (295-398)||(4117592-4117695)
chr3 (291-398)||(15768183-15768290)
chr3 (295-398)||(3482415-3482518)
chr3 (295-398)||(55128790-55128893)
chr3 (287-398)||(17364055-17364168)
chr3 (295-398)||(17357836-17357941)
chr3 (290-398)||(30341836-30341944)
chr3 (295-405)||(21494287-21494398)
chr3 (295-392)||(27605133-27605231)
chr3 (295-390)||(758368-758464)
chr3 (295-390)||(23666123-23666219)
chr3 (295-390)||(24038371-24038467)
chr3 (295-390)||(39775728-39775824)
chr3 (295-390)||(8069677-8069772)
chr3 (295-391)||(2617255-2617352)
chr3 (295-390)||(3672583-3672679)
chr3 (295-390)||(3692615-3692711)
chr3 (287-398)||(10321434-10321546)
chr3 (295-390)||(14438695-14438791)
chr3 (295-390)||(18467222-18467318)
chr3 (295-390)||(20520051-20520147)
chr3 (287-401)||(10586172-10586286)
chr3 (295-390)||(7571218-7571314)
chr3 (295-390)||(49971424-49971520)
chr3 (296-390)||(8883168-8883263)
chr3 (295-390)||(3033641-3033737)
chr3 (295-390)||(3418992-3419088)
chr3 (411-497)||(38436850-38436938)
chr3 (295-390)||(32474680-32474774)
chr3 (299-390)||(12112641-12112733)
chr3 (295-390)||(12965873-12965969)
chr3 (295-343)||(25726841-25726889)
chr3 (297-366)||(1688910-1688980)
chr3 (287-368)||(31002689-31002770)
chr3 (295-390)||(8887927-8888023)
chr3 (295-390)||(18472005-18472100)
chr3 (295-390)||(29350237-29350333)
chr3 (295-390)||(55431312-55431408)
chr3 (287-397)||(45904442-45904552)
chr3 (315-388)||(26706803-26706877)
chr3 (349-401)||(795394-795446)
chr3 (295-390)||(29715641-29715737)
chr3 (295-344)||(27708875-27708924)
chr3 (349-390)||(27708988-27709029)
chr3 (299-390)||(12971633-12971725)
chr3 (346-390)||(23661464-23661508)
chr3 (295-397)||(45904898-45905000)
chr3 (295-339)||(2207759-2207803)
chr3 (303-347)||(6024127-6024171)
[»] chr7 (45 HSPs)
chr7 (259-528)||(24528319-24528589)
chr7 (259-528)||(28292364-28292632)
chr7 (287-524)||(9973454-9973692)
chr7 (297-452)||(33226416-33226571)
chr7 (287-398)||(16539404-16539515)
chr7 (287-398)||(16626147-16626258)
chr7 (287-398)||(33237994-33238105)
chr7 (287-398)||(42571937-42572048)
chr7 (287-398)||(47998967-47999078)
chr7 (295-398)||(12934397-12934500)
chr7 (287-398)||(33243171-33243282)
chr7 (287-398)||(47993792-47993903)
chr7 (287-398)||(2234622-2234733)
chr7 (287-398)||(32212646-32212757)
chr7 (287-398)||(47177111-47177222)
chr7 (295-398)||(17495403-17495506)
chr7 (295-398)||(17557708-17557811)
chr7 (287-398)||(43892850-43892961)
chr7 (287-398)||(19309603-19309713)
chr7 (287-398)||(21081031-21081144)
chr7 (295-390)||(26341198-26341294)
chr7 (295-390)||(4579507-4579603)
chr7 (295-388)||(3357634-3357728)
chr7 (295-390)||(9650967-9651063)
chr7 (295-390)||(23246933-23247029)
chr7 (295-390)||(23866067-23866163)
chr7 (287-401)||(27256234-27256348)
chr7 (287-362)||(22857715-22857790)
chr7 (295-390)||(4930232-4930328)
chr7 (295-390)||(8076049-8076145)
chr7 (295-390)||(13314236-13314332)
chr7 (295-390)||(10388367-10388461)
chr7 (295-390)||(44423137-44423233)
chr7 (295-390)||(8268292-8268388)
chr7 (295-390)||(12254078-12254174)
chr7 (295-390)||(44510677-44510773)
chr7 (299-373)||(42627214-42627289)
chr7 (295-390)||(27238241-27238337)
chr7 (287-401)||(40865342-40865456)
chr7 (285-401)||(19640288-19640404)
chr7 (295-341)||(16372397-16372443)
chr7 (295-388)||(29150933-29151027)
chr7 (295-344)||(30256853-30256902)
chr7 (346-390)||(6590983-6591027)
chr7 (295-390)||(25543362-25543458)
[»] scaffold0011 (2 HSPs)
scaffold0011 (279-478)||(1549-1749)
scaffold0011 (290-528)||(7041-7281)
[»] chr6 (46 HSPs)
chr6 (287-497)||(19478140-19478351)
chr6 (287-497)||(13604984-13605195)
chr6 (290-455)||(31495777-31495941)
chr6 (290-455)||(31501163-31501327)
chr6 (287-398)||(22698235-22698346)
chr6 (295-455)||(31515667-31515826)
chr6 (287-398)||(21396691-21396802)
chr6 (287-398)||(24192472-24192583)
chr6 (287-398)||(29491229-29491340)
chr6 (287-398)||(34142072-34142183)
chr6 (287-398)||(34154688-34154799)
chr6 (282-398)||(31981547-31981663)
chr6 (287-398)||(24191375-24191486)
chr6 (287-384)||(21401747-21401844)
chr6 (290-398)||(34375914-34376022)
chr6 (287-398)||(22703358-22703469)
chr6 (287-478)||(17281474-17281667)
chr6 (295-402)||(12182988-12183096)
chr6 (287-405)||(3901904-3902023)
chr6 (290-417)||(31475988-31476115)
chr6 (299-398)||(2818139-2818238)
chr6 (287-402)||(10642701-10642817)
chr6 (295-391)||(5600971-5601068)
chr6 (295-390)||(11570749-11570845)
chr6 (287-405)||(29325527-29325646)
chr6 (295-390)||(6407860-6407956)
chr6 (295-390)||(12688970-12689066)
chr6 (295-390)||(24589164-24589260)
chr6 (295-390)||(33687603-33687699)
chr6 (295-390)||(2700106-2700202)
chr6 (295-390)||(8747781-8747877)
chr6 (295-390)||(12406353-12406449)
chr6 (295-390)||(21309030-21309126)
chr6 (295-355)||(11428042-11428104)
chr6 (316-390)||(17964559-17964634)
chr6 (287-388)||(5740792-5740894)
chr6 (290-405)||(11956686-11956802)
chr6 (316-390)||(16836156-16836231)
chr6 (306-402)||(22713705-22713802)
chr6 (346-390)||(11614092-11614136)
chr6 (295-390)||(13736678-13736774)
chr6 (287-325)||(6728400-6728438)
chr6 (295-344)||(19674312-19674361)
chr6 (295-331)||(11534738-11534774)
chr6 (295-331)||(11560248-11560284)
chr6 (295-390)||(29892261-29892357)
[»] chr2 (42 HSPs)
chr2 (290-528)||(42914637-42914876)
chr2 (295-528)||(5089278-5089512)
chr2 (287-398)||(42723443-42723554)
chr2 (287-398)||(42728612-42728723)
chr2 (287-398)||(44096294-44096405)
chr2 (287-398)||(44754588-44754699)
chr2 (287-398)||(44759754-44759865)
chr2 (287-398)||(40518464-40518575)
chr2 (287-398)||(28751721-28751832)
chr2 (290-395)||(40392314-40392419)
chr2 (295-390)||(10160724-10160820)
chr2 (295-390)||(30658262-30658358)
chr2 (295-390)||(1934993-1935089)
chr2 (295-390)||(9180724-9180820)
chr2 (295-390)||(18344430-18344526)
chr2 (287-367)||(19538377-19538458)
chr2 (295-390)||(9189803-9189899)
chr2 (295-390)||(30650928-30651024)
chr2 (287-428)||(6297848-6297989)
chr2 (295-390)||(12796924-12797020)
chr2 (295-390)||(25478297-25478393)
chr2 (295-390)||(25497325-25497421)
chr2 (295-390)||(31326738-31326834)
chr2 (295-401)||(11658877-11658984)
chr2 (295-386)||(42926763-42926857)
chr2 (295-388)||(29677380-29677474)
chr2 (295-390)||(7737851-7737947)
chr2 (295-390)||(19892466-19892562)
chr2 (285-367)||(28854994-28855077)
chr2 (295-390)||(19578414-19578510)
chr2 (299-390)||(35601925-35602017)
chr2 (280-422)||(39542886-39543029)
chr2 (295-388)||(29677766-29677860)
chr2 (295-391)||(160040-160137)
chr2 (299-390)||(35638997-35639089)
chr2 (318-392)||(28945191-28945266)
chr2 (287-390)||(29907368-29907468)
chr2 (295-374)||(21523736-21523815)
chr2 (295-390)||(40847595-40847691)
chr2 (295-372)||(28603297-28603375)
chr2 (295-339)||(22844818-22844862)
chr2 (295-390)||(30631578-30631674)
[»] scaffold0132 (4 HSPs)
scaffold0132 (277-436)||(2726-2885)
scaffold0132 (277-436)||(10686-10845)
scaffold0132 (378-436)||(2627-2685)
scaffold0132 (378-436)||(10587-10645)
[»] scaffold0166 (2 HSPs)
scaffold0166 (287-398)||(13732-13843)
scaffold0166 (295-398)||(19187-19293)
[»] scaffold0055 (1 HSPs)
scaffold0055 (287-398)||(3050-3161)
[»] scaffold0052 (1 HSPs)
scaffold0052 (287-398)||(81374-81485)
[»] scaffold0014 (2 HSPs)
scaffold0014 (287-398)||(31537-31648)
scaffold0014 (287-395)||(26365-26473)
[»] scaffold0594 (1 HSPs)
scaffold0594 (287-398)||(9200-9311)
[»] scaffold0517 (1 HSPs)
scaffold0517 (287-398)||(3555-3666)
[»] scaffold0060 (3 HSPs)
scaffold0060 (295-398)||(37010-37113)
scaffold0060 (287-428)||(47819-47960)
scaffold0060 (295-428)||(52862-52995)
[»] scaffold0002 (2 HSPs)
scaffold0002 (295-390)||(4073-4169)
scaffold0002 (327-390)||(443945-444007)
[»] scaffold0352 (1 HSPs)
scaffold0352 (295-390)||(7103-7199)
[»] scaffold0182 (1 HSPs)
scaffold0182 (295-390)||(9887-9983)
[»] scaffold0067 (1 HSPs)
scaffold0067 (290-402)||(33956-34069)
[»] scaffold0020 (1 HSPs)
scaffold0020 (295-428)||(1188-1321)
[»] scaffold0045 (1 HSPs)
scaffold0045 (295-390)||(83065-83161)
[»] scaffold0061 (1 HSPs)
scaffold0061 (287-401)||(45776-45890)
[»] scaffold0017 (1 HSPs)
scaffold0017 (287-401)||(152897-153011)
[»] scaffold0012 (1 HSPs)
scaffold0012 (295-390)||(166086-166182)
[»] scaffold0057 (1 HSPs)
scaffold0057 (301-390)||(35639-35729)
[»] scaffold0008 (1 HSPs)
scaffold0008 (300-390)||(255821-255912)
[»] scaffold0041 (1 HSPs)
scaffold0041 (287-369)||(35676-35758)
[»] scaffold0018 (1 HSPs)
scaffold0018 (307-395)||(171711-171798)


Alignment Details
Target: chr1 (Bit Score: 244; Significance: 1e-135; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 259 - 546
Target Start/End: Original strand, 10106067 - 10106354
Alignment:
Q  259 ttttgaaattaaaactgccaaaagaaaataccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtag 358  Q
    ||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10106067 ttttgaaataagaactgccaaaagaaaataccgggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaagttgtgcaaggtag 10106166  T
Q  359 actaacaaccacgccgtctccaggataaaacagcccagatcactgttacgattatatactgcacagtatacaaccgctcgtagatatacacctcaaatat 458  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10106167 actaacaaccacgccgtctccaggataaaacaacccagatcactgttacgattatatactgcacaatatacaaccgctcgtagatatacacctcaaatat 10106266  T
Q  459 agtttaatcgtttgattaaactattcaacacggtgcgtaaccgttccgattgaaaccgaaagggacagaagaggaggaagaaaagaat 546  Q
    |||||||||||||||||||||||||||| ||||| || | |||||| |||||||||||||||||||||||||||||||||||||||||    
T  10106267 agtttaatcgtttgattaaactattcaatacggtacgaagccgttctgattgaaaccgaaagggacagaagaggaggaagaaaagaat 10106354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 259 - 546
Target Start/End: Original strand, 13890777 - 13891065
Alignment:
Q  259 ttttgaaattaaaactgccaaaagaaaataccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtag 358  Q
    |||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  13890777 tttttaaattaatactgccaaaagaaaataccgggttgagtcacgaccaggtcgctctctttaagacgttttgcggcactacccaagttgtgcaaggtag 13890876  T
Q  359 actaacaaccacgccgtctccaggataaaacagcccagatcactgttacgattatatactgcacagtatacaaccgctcgtagatatacacctcaaatat 458  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||    
T  13890877 actaacaaccacaccgtctccaggataaaacagcccagatcactgttacgattatatactgcacaatacacaatcgctcgtagatatacacctcaaatat 13890976  T
Q  459 agtttaatcgtttgatt-aaactattcaacacggtgcgtaaccgttccgattgaaaccgaaagggacagaagaggaggaagaaaagaat 546  Q
    ||||||||||||||||| ||||||||||| ||||| |||| |||||| | | |||||||||||||||||||||||||||||||||||||    
T  13890977 agtttaatcgtttgattaaaactattcaatacggtacgtagccgttctgttcgaaaccgaaagggacagaagaggaggaagaaaagaat 13891065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 259 - 546
Target Start/End: Original strand, 38734240 - 38734527
Alignment:
Q  259 ttttgaaattaaaactgccaaaagaaaataccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtag 358  Q
    |||||||||||| ||||||||| |||  || |||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  38734240 ttttgaaattaatactgccaaaggaat-tatcgggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccctagttgtgcaaggtag 38734338  T
Q  359 actaacaaccacgccgtctccaggataaaacagcccagatcactgttacgattatatactgcacagtatacaaccgctcgtagatatacacctcaaatat 458  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||    
T  38734339 actaacaaccacgccgtctccaggataaaacagtccagatcactgttacgattatatactgcacagtacacaatcgctcgtagatttacacctcaaatat 38734438  T
Q  459 agtttaatcgtttgatt-aaactattcaacacggtgcgtaaccgttccgattgaaaccgaaagggacagaagaggaggaagaaaagaat 546  Q
    ||||||||||||||||| ||||||||||| ||||| |||| ||| ||   | |||| |||||||||||||||| ||| | |||||||||    
T  38734439 agtttaatcgtttgattaaaactattcaatacggtacgtagccgctctattcgaaatcgaaagggacagaagaagagaaggaaaagaat 38734527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 290 - 524
Target Start/End: Complemental strand, 26651266 - 26651031
Alignment:
Q  290 cgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaac 389  Q
    |||| ||||||||||||||||| ||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26651266 cgggttgagtcacgaccaggtcactctctttaagatgttttgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaac 26651167  T
Q  390 agcccagatcactgttacgattatatactgcacagtatacaaccgctcgtagatatacacctc-aaatatagtttaatcgtttgatt-aaactattcaac 487  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||     
T  26651166 agcccag-tcactgttacgattatatactgcacagtatacaatcgctcgtagatatacacctcgaaatatagtttaatcgtttgattaaaactattcaat 26651068  T
Q  488 acggtgcgtaaccgttccgattgaaaccgaaagggac 524  Q
    ||||| |||| ||| ||   | |||||||||||||||    
T  26651067 acggtacgtagccgctctattcgaaaccgaaagggac 26651031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 287 - 492
Target Start/End: Complemental strand, 5602528 - 5602322
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||| |||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  5602528 taccgggttgagtcacgaccagatcgctctctttaagacgtttcgctgcactaccctagttgtgcaaggtagactaacaaccacgccgtctccaagataa 5602429  T
Q  387 aacagcccagatcactgttacgattatatactgcacagtatacaaccgctcgtagatatacacctc-aaatatagtttaatcgtttgatt-aaactattc 484  Q
    ||||| |||||||||| ||||||||||| |||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||| |||||||||    
T  5602428 aacagtccagatcactattacgattatacactgcacagtatacaatcgctcg-agatatacacctcaaaatatagtttaatcgtttgattaaaactattc 5602330  T
Q  485 aacacggt 492  Q
    || |||||    
T  5602329 aatacggt 5602322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 290 - 492
Target Start/End: Original strand, 14582094 - 14582297
Alignment:
Q  290 cgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaac 389  Q
    |||| ||||| |||| |||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  14582094 cgggttgagttacgatcaggtcgctctctttaagaagtttcgcggcactaccctagttgtgcaaggtagactaacaaccacaccgtctccaggataaaac 14582193  T
Q  390 agcccagatcactgttacgattatatactgcacagtatacaaccgctcgtagatatacacctc-aaatatagtttaatcgtttgatt-aaactattcaac 487  Q
    || |||||||||||||||||||||| |||||||| ||||||| |||||| ||||||||||||| ||||||||  |||||||| |||| |||||||||||     
T  14582194 agtccagatcactgttacgattatacactgcacaatatacaatcgctcg-agatatacacctctaaatatagcctaatcgttcgattaaaactattcaat 14582292  T
Q  488 acggt 492  Q
    |||||    
T  14582293 acggt 14582297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 295 - 528
Target Start/End: Complemental strand, 19422973 - 19422735
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtag----actaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||| ||| |||||||||||||||| |||||| |||||||||||||||||||||||||    ||||||||| ||||| |||||||||||||| |    
T  19422973 tgagtcacgatcagatcgctctctttaagacgtttcgctgcactacccaagttgtgcaaggtaggtagactaacaactacgccatctccaggataaaata 19422874  T
Q  391 gcccagatcactgttacgattatatactgcacagtatacaaccgctcgtagatatacacctc-aaatatagtttaatcgtttgatt-aaactattcaaca 488  Q
    |||||||||||| ||||||||||| ||||||| |||||||| |||||| ||||||||||||| |||||||||||||||| | |||| ||||||||||| |    
T  19422873 gcccagatcactattacgattatacactgcacggtatacaatcgctcg-agatatacacctcaaaatatagtttaatcgatcgattaaaactattcaata 19422775  T
Q  489 cggtgcgtaaccgttccgattgaaaccgaaagggacagaa 528  Q
    ||||  ||| ||| ||  || |||||||||||||||||||    
T  19422774 cggtatgtagccgctctaatcgaaaccgaaagggacagaa 19422735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 290 - 402
Target Start/End: Complemental strand, 39747265 - 39747153
Alignment:
Q  290 cgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaac 389  Q
    |||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  39747265 cgggttgagtcacgaccaggttgctctctttaagacgtttcgcggcactacccaagttgtgcaaggtagactagcaaccacgtcgtctccaggataaaac 39747166  T
Q  390 agcccagatcact 402  Q
    |||||||||||||    
T  39747165 agcccagatcact 39747153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 11251216 - 11251105
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||    
T  11251216 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataa 11251117  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  11251116 aacagcccagat 11251105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 36684818 - 36684707
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||  | ||||||||||||||||| ||||| |||||||||||||||||    
T  36684818 taccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataa 36684719  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  36684718 aacagcccagat 36684707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 37404519 - 37404408
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||    
T  37404519 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataa 37404420  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  37404419 aacagcccagat 37404408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 37409640 - 37409529
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||| ||||| |||||| ||||||||||    
T  37409640 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtttccaggataa 37409541  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  37409540 aacagcccagat 37409529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 287 - 395
Target Start/End: Complemental strand, 34318327 - 34318219
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||  | ||||||||||||||||| ||||| |||||||||||||||||    
T  34318327 taccgggatgagtcacgaccaagtcgctctctttaagacgtttcgcggcactacctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataa 34318228  T
Q  387 aacagccca 395  Q
    |||||||||    
T  34318227 aacagccca 34318219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 3584593 - 3584704
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||||||||| |||||||||| |||||||| |||||| || ||||||||||||||||| ||||| |||||||||||||||||    
T  3584593 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggaactacctaaattgtgcaaggtagactagcaaccgcgccgtctccaggataa 3584692  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  3584693 aacagcccagat 3584704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 27716435 - 27716546
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||| ||||  || ||||||||||||||    
T  27716435 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaacagcgtcgtctccaggataa 27716534  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  27716535 aacagcccagat 27716546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 295 - 398
Target Start/End: Original strand, 5724979 - 5725082
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaacagccc 394  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||| || ||||||||||||||||| ||||| ||||||||||||||||||||||| |    
T  5724979 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcac 5725078  T
Q  395 agat 398  Q
    ||||    
T  5725079 agat 5725082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 5730097 - 5730208
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||||||||| |||||||||| |||||||| |||||| || ||||||||||||||||| ||||| | |||||||||||||||    
T  5730097 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggaactacctaaattgtgcaaggtagactagcaaccgcaccgtctccaggataa 5730196  T
Q  387 aacagcccagat 398  Q
    |||||| |||||    
T  5730197 aacagcacagat 5730208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 317 - 398
Target Start/End: Complemental strand, 48246756 - 48246675
Alignment:
Q  317 ctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaacagcccagat 398  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  48246756 ctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagcccagat 48246675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 290 - 379
Target Start/End: Complemental strand, 11387930 - 11387841
Alignment:
Q  290 cgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctcc 379  Q
    |||| |||||||||||||||||||| | |||||||| ||||||||||||||| |||||||||||||||||||| ||||| ||||||||||    
T  11387930 cggggtgagtcacgaccaggtcgctttttttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctcc 11387841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 287 - 428
Target Start/End: Complemental strand, 41098055 - 41097914
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggata 385  Q
    ||||||| |||||||||||||||||||| |||||||||||  || ||||||||||| || |||||||||||||||||||||||  |  | ||||||||||    
T  41098055 taccgggttgagtcacgaccaggtcgctttctttaagacaaatcacggcactacccgaaattgtgcaaggtagactaacaaccgtg-tgcctccaggata 41097957  T
Q  386 aaacagcccagatca-ctgttacgattatatactgcacagtata 428  Q
    ||||||||||| ||| ||||| |||||| ||||||||| |||||    
T  41097956 aaacagcccagttcacctgtt-cgattaaatactgcaccgtata 41097914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 51041557 - 51041463
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||||||||||||||| |||||||| ||||| |||||| ||||| |||||||||| |||||| ||||||||||| ||||| |||||||||    
T  51041557 tgagtcacgaccaggtcgctct-tttaagacgtttcgtggcactgcccaaattgtgcaaggcagactatcaaccacgccgcctccaagataaaaca 51041463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 10135455 - 10135551
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacc-caagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||  || |||||||||| |||| | ||||||||||| ||| |||||||||||    
T  10135455 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactacctaaaattgtgcaaggcagacaatcaaccacgccgcctctaggataaaaca 10135551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 23192913 - 23192817
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| ||| || |||| ||||| |||||| ||||||||||  |||||||||||||||    
T  23192913 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtacaaggcagactatcaaccacgcctcctccaggataaaaca 23192817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 40165979 - 40166075
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||| ||||||||||||||||| ||||| |||||| ||| || |||||||||| ||||||||||| |||||| ||| |||||||||||    
T  40165979 tgagtcacgaccatgtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactaacaacaacgccgcctctaggataaaaca 40166075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 379
Target Start/End: Original strand, 27711319 - 27711388
Alignment:
Q  310 tcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctcc 379  Q
    ||||| |||||||||| ||||||||||||||| |||||||||||||||||||| ||||| ||||||||||    
T  27711319 tcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctcc 27711388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 19799109 - 19799013
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcacta-cccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||| ||| |||||||||||||||| ||||| ||||||| || || |||||||||  |||||| ||||||||||| |||||||||||||||    
T  19799109 tgagtcacgatcagatcgctctctttaagacgtttcgtggcactatccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaaca 19799013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 299 - 390
Target Start/End: Complemental strand, 33301272 - 33301180
Alignment:
Q  299 tcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||||||| |||||||||||| ||||| |||||| ||| || |||||||||  |||||| ||||||||||| |||||||||||||||    
T  33301272 tcacgaccaggtcgttctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaaca 33301180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 16035607 - 16035703
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcact-acccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||| |||||||| || ||||| ||||||  || ||||||||||||  ||| || ||||||||||| |||||||||||||||    
T  16035607 tgagtcacgaccaggtcgccctctttaacacgtttcgtggcactgtccaaagttgtgcaagacagattatcaaccacgccgcctccaggataaaaca 16035703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 16649708 - 16649613
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcact-acccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||| | ||||||  || || ||||||||| ||||||| ||||||||||| |||| ||||||||||    
T  16649708 tgagtcacgaccaggtcgctctctttaagacgttt-gtggcactgtccaaaattgtgcaagatagactatcaaccacgccgcctccgggataaaaca 16649613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 18784644 - 18784549
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||| ||||||||||| |||||||||||||| |||||| || ||  |||||||||| |||||| ||||||||||| |||||| ||||||||    
T  18784644 tgagtcacgatcaggtcgctct-tttaagacatttcgtggcactgcctaaaattgtgcaaggcagactatcaaccacgccgcctccagaataaaaca 18784549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 47451321 - 47451225
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacc-caagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||  |||||| ||  || |||||||||  |||||| ||||||||||| ||||| |||||||||    
T  47451321 tgagtcacgaccaggtcgctctctttaagacgtttcatggcactgccaaaaattgtgcaagacagactatcaaccacgccgcctccaagataaaaca 47451225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 47455482 - 47455386
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcact-acccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||| |||| |  || || |||||||||  ||| || ||||||||||| |||||||||||||||    
T  47455482 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgtccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 47455386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 10140088 - 10140184
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactac-ccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||| ||||||||||||||||| || ||||| |||||||| | || |||||||||| |||| | ||||||||||  ||| |||||||||||    
T  10140088 tgagtcacgatcaggtcgctctctttaacacgtttcgtggcactactcaaaattgtgcaaggcagacaatcaaccacgccacctctaggataaaaca 10140184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 12259995 - 12260091
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||| |||||||| ||||||||||||||||| ||||| | |||| ||| || |||||||||  |||||| ||||||||||||||  |||||||||||    
T  12259995 tgagacacgaccatgtcgctctctttaagacgtttcgtgacactgcccaaaattgtgcaagacagactatcaaccacgccgtctttaggataaaaca 12260091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 401
Target Start/End: Original strand, 33055038 - 33055144
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagtt-gtgcaaggtagactaacaaccacgccgtctccaggataaaacagcc 393  Q
    |||||||| |||| |||||| ||||||||||   || ||||||||||| |||| ||||||||||||||| |||||  || | ||||||||||||||||||    
T  33055038 tgagtcacaaccatgtcgctttctttaagactaatcacggcactacccgagtttgtgcaaggtagactatcaaccgtgc-gcctccaggataaaacagcc 33055136  T
Q  394 cagatcac 401  Q
    ||| ||||    
T  33055137 cagttcac 33055144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 295 - 368
Target Start/End: Original strand, 3094113 - 3094187
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaacc 368  Q
    ||||||||||||||||||||||||||||||| ||||  |||||| ||| || |||||||||| |||||| |||||    
T  3094113 tgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaaggcagactatcaacc 3094187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 344
Target Start/End: Original strand, 25855170 - 25855219
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaa 344  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| |||||    
T  25855170 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaa 25855219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 374
Target Start/End: Complemental strand, 26927818 - 26927738
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccg 374  Q
    ||||||||||| | ||||||||||||||||| ||||| |||| | ||| || |||||||||| |||||| |||||||||||    
T  26927818 tgagtcacgactaagtcgctctctttaagacgtttcgtggcattgcccaaaattgtgcaaggcagactatcaaccacgccg 26927738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 297 - 387
Target Start/End: Complemental strand, 39588461 - 39588370
Alignment:
Q  297 agtcacgaccaggtcgctctctttaagacatttcgcggcact-acccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaa 387  Q
    |||||||| |||||||||||||||||||| ||||| ||||||  || || |||||||||  |||||| | ||||||||  ||||||||||||    
T  39588461 agtcacgatcaggtcgctctctttaagacgtttcgtggcactgtccaaaattgtgcaagacagactatctaccacgcctactccaggataaa 39588370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 290 - 366
Target Start/End: Complemental strand, 8267931 - 8267853
Alignment:
Q  290 cgggatgagtcacgaccaggtcgctctctttaagacatttc-gcggcactacccaag-ttgtgcaaggtagactaacaa 366  Q
    |||| |||||||||||||||||||| |||||||||| ||||  || ||||| || || |||||||||||||||||||||    
T  8267931 cgggttgagtcacgaccaggtcgctttctttaagacgtttcaccgacactatccgagtttgtgcaaggtagactaacaa 8267853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 358
Target Start/End: Complemental strand, 4633022 - 4632958
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcacta-cccaagttgtgcaaggtag 358  Q
    ||||||||||| | ||||||||||||||||| ||| ||||||||| || || |||||||||||||    
T  4633022 tgagtcacgactatgtcgctctctttaagacgttttgcggcactatccgaatttgtgcaaggtag 4632958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 25188368 - 25188272
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagtt-gtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||| | ||||| ||| |||| ||||  ||||||||||||||   |||| |||||||||||||||||||||  | |||||||| |||||||||    
T  25188368 tgagtcactatcaggttgctttcttgaagaagtttcgcggcactacttgagtttgtgcaaggtagactaacaaccgtgtcgtctccaagataaaaca 25188272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 393
Target Start/End: Original strand, 12906166 - 12906251
Alignment:
Q  307 aggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaacagcc 393  Q
    ||||||||||||||||||| ||||| |||||| ||| || |||||||| | |||||| |||||||| || | ||||||||||||||||    
T  12906166 aggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaa-gcagactatcaaccacgacg-ccccaggataaaacagcc 12906251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 295 - 325
Target Start/End: Original strand, 16832100 - 16832130
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagac 325  Q
    |||||||||||||||||||||||||||||||    
T  16832100 tgagtcacgaccaggtcgctctctttaagac 16832130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 307 - 396
Target Start/End: Complemental strand, 33381004 - 33380915
Alignment:
Q  307 aggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaacagcccag 396  Q
    ||||||||||||||||||| ||||| | |||| | |||  |||||||||  |||||| |||||||| |||| ||| |||||||||||||||    
T  33381004 aggtcgctctctttaagacgtttcgtgacactgctcaaaattgtgcaagc-agactatcaaccacgacgtccccaagataaaacagcccag 33380915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 307 - 390
Target Start/End: Complemental strand, 2493901 - 2493818
Alignment:
Q  307 aggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||| ||||| |||||| ||| || |||||||| | | |||| |||||||| || | |||||||||||||    
T  2493901 aggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaa-gcaaactatcaaccacggcgcccccaggataaaaca 2493818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 240; Significance: 1e-132; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 259 - 546
Target Start/End: Original strand, 7805035 - 7805322
Alignment:
Q  259 ttttgaaattaaaactgccaaaagaaaataccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtag 358  Q
    ||||||||| | |||||||||||||||||| |||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  7805035 ttttgaaataagaactgccaaaagaaaatatcgggttgagtcacgaccaggtccctctctttaagacgtttcgcggcactacccaagttgtgcaaggtag 7805134  T
Q  359 actaacaaccacgccgtctccaggataaaacagcccagatcactgttacgattatatactgcacagtatacaaccgctcgtagatatacacctcaaatat 458  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7805135 actaacaaccacgccgtctccaggataaaacagcccagatcactgttacgattatatactgcacagtatacaaccgctcgtagatatacacctcaaatat 7805234  T
Q  459 agtttaatcgtttgattaaactattcaacacggtgcgtaaccgttccgattgaaaccgaaagggacagaagaggaggaagaaaagaat 546  Q
    |||||||||||||||||||||||||||| ||||| || | |||||| | |||||||||||||||||||||||||||||||||||||||    
T  7805235 agtttaatcgtttgattaaactattcaatacggtacgaagccgttctgtttgaaaccgaaagggacagaagaggaggaagaaaagaat 7805322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 259 - 546
Target Start/End: Original strand, 14374099 - 14374386
Alignment:
Q  259 ttttgaaattaaaactgccaaaagaaaataccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtag 358  Q
    ||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  14374099 ttttgaaattagaactgccagaagaaaataccgggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaagttgtgcagggtag 14374198  T
Q  359 actaacaaccacgccgtctccaggataaaacagcccagatcactgttacgattatatactgcacagtatacaaccgctcgtagatatacacctcaaatat 458  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  14374199 actaacaaccacgccgtctccaggataaaacagcccagatcactgttacgattatacactgcacagtatacaaccgctcgtagatatacacctcaaatat 14374298  T
Q  459 agtttaatcgtttgattaaactattcaacacggtgcgtaaccgttccgattgaaaccgaaagggacagaagaggaggaagaaaagaat 546  Q
    |||||||||||||||||||||||||||| ||||| || | |||||| |  |||||||||||||||||||||| |||||||||||||||    
T  14374299 agtttaatcgtttgattaaactattcaatacggtacgaagccgttctgtatgaaaccgaaagggacagaagaagaggaagaaaagaat 14374386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 259 - 546
Target Start/End: Complemental strand, 13582822 - 13582533
Alignment:
Q  259 ttttgaaattaaaactgccaaaa-gaaaataccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggta 357  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  13582822 ttttgaaattaaaactgccaaattgaaaataccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaatttgtgcaaggta 13582723  T
Q  358 gactaacaaccacgccgtctccaggataaaacagcccagatcactgttacgattatatactgcacagtatacaaccgctcgtagatatacacctcaaata 457  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13582722 gactaacaaccacgccgtctccaggataaaacagcccagatcactgttacgattatatactgcacagtatacaaccgctcgtagatatacacctcaaata 13582623  T
Q  458 tagtttaatcgtttgattaaacta-ttcaacacggtgcgtaaccgttccgattgaaaccgaaagggacagaagaggaggaagaaaagaat 546  Q
    ||||||||||||| ||||| |||| ||||| || || ||||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  13582622 tagtttaatcgttcgattatactatttcaatactgtacgtaaccgttctgtatgaaaccgaaagggacagaagaggaggaagaaaagaat 13582533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 259 - 528
Target Start/End: Complemental strand, 24436000 - 24435731
Alignment:
Q  259 ttttgaaattaaaactgccaaaagaaaataccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtag 358  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  24436000 ttttgcaattaaaactgccaaaagaaaataccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactatccaagttgtgcaaggtag 24435901  T
Q  359 actaacaaccacgccgtctccaggataaaacagcccagatcactgttacgattatatactgcacagtatacaaccgctcgtagatatacacctcaaatat 458  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24435900 actatcaaccacgccgtctccaggataaaacagcccagatcactgttacgattatatactgcacagtatacaaccgctcgtagatatacacctcaaatat 24435801  T
Q  459 agtttaatcgtttgattaaactattcaacacggtgcgtaaccgttccgattgaaaccgaaagggacagaa 528  Q
    |||||||||||||||||| ||||||||| ||||| |||| ||| || | |||||| ||||||||||||||    
T  24435800 agtttaatcgtttgattagactattcaatacggtacgtagccgctctgtttgaaatcgaaagggacagaa 24435731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 17510050 - 17510161
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||    
T  17510050 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataa 17510149  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  17510150 aacagcccagat 17510161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 24771460 - 24771349
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    |||||||||||||||||||||||||||| |||||||||  ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  24771460 taccgggatgagtcacgaccaggtcgctttctttaagatgtttcgcggcactacctaagttgtgcaaggtagactaacaaccgcgccgtctccaggataa 24771361  T
Q  387 aacagcccagat 398  Q
    |||| |||||||    
T  24771360 aacaacccagat 24771349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 36253818 - 36253929
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||| ||||| ||||| |||||||||||    
T  36253818 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgcctccaggataa 36253917  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  36253918 aacagcccagat 36253929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 42019565 - 42019676
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||| |||||  ||||||||||||||||    
T  42019565 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgtgccgtctccaggataa 42019664  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  42019665 aacagcccagat 42019676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 17504945 - 17505056
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||||||| | |||||||||| ||||||||||||||| |||||||||||||||||||| ||||| || ||||||||||||||    
T  17504945 taccggggtgagtcacgaccaggtcgttttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgtcgtctccaggataa 17505044  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  17505045 aacagcccagat 17505056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 295 - 398
Target Start/End: Original strand, 41858593 - 41858696
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaacagccc 394  Q
    |||||||||| ||||||||| |||||||||| |||| |||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  41858593 tgagtcacgatcaggtcgctttctttaagacgtttcacggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagccc 41858692  T
Q  395 agat 398  Q
    ||||    
T  41858693 agat 41858696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 295 - 398
Target Start/End: Complemental strand, 24776910 - 24776804
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaacc---acgccgtctccaggataaaacag 391  Q
    ||||||||||||| |||||| |||||||||| ||||||||||||||| |||||||||||||||||||| |||||    ||||||||||||||||||||||    
T  24776910 tgagtcacgaccatgtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcggcgccgtctccaggataaaacag 24776811  T
Q  392 cccagat 398  Q
    |||||||    
T  24776810 cccagat 24776804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 1414146 - 1414051
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||| ||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||| ||||| ||||||||||| |||||||||    
T  1414146 tgagtcacgatcaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaagataaaaca 1414051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 295 - 398
Target Start/End: Original strand, 41853548 - 41853651
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaacagccc 394  Q
    |||||||||||||||||||| |||||||||| ||||||| ||||||| ||||||||||| |||||||| ||||| ||||||||| | |||||||||||||    
T  41853548 tgagtcacgaccaggtcgctttctttaagacgtttcgcgacactacctaagttgtgcaaagtagactagcaaccgcgccgtctctacgataaaacagccc 41853647  T
Q  395 agat 398  Q
    ||||    
T  41853648 agat 41853651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 26709094 - 26709207
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagt--tgtgcaaggtagactaacaaccacgccgtctccaggat 384  Q
    ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| || |  |||||||||||||||| ||||| || | ||||||||||    
T  26709094 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaaattgtgtgcaaggtagactagcaaccgcgtcatctccaggat 26709193  T
Q  385 aaaacagcccagat 398  Q
    ||||||||||||||    
T  26709194 aaaacagcccagat 26709207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 26978828 - 26978941
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagt--tgtgcaaggtagactaacaaccacgccgtctccaggat 384  Q
    ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| || |  |||||||||||||||| ||||| || | ||||||||||    
T  26978828 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaaattgtgtgcaaggtagactagcaaccgcgtcatctccaggat 26978927  T
Q  385 aaaacagcccagat 398  Q
    ||||||||||||||    
T  26978928 aaaacagcccagat 26978941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 37248891 - 37248795
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacc-caagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||  || |||||||||| |||||| ||||||||||| |||||||||||||||    
T  37248891 tgagtcacgaccaggtcgctctctttaagacatttcgtggcactacctaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 37248795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 26667271 - 26667367
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| ||| || |||||||||| |||||| ||||||||||| |||||||||||||||    
T  26667271 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 26667367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 26938868 - 26938964
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| ||| || |||||||||| |||||| ||||||||||| |||||||||||||||    
T  26938868 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 26938964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 29168069 - 29167973
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| ||| || |||||||||| |||||| ||||||||||| |||||||||||||||    
T  29168069 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 29167973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 556694 - 556790
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||| | |||||| ||| || |||||||||| |||||| ||||||||||| |||||||||||||||    
T  556694 tgagtcacgaccaggtcgctctctttaagacgttttgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 556790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 561466 - 561562
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||| | |||||| ||| || |||||||||| |||||| ||||||||||| |||||||||||||||    
T  561466 tgagtcacgaccaggtcgctctctttaagacgttttgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 561562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 12103024 - 12103120
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||| ||||||||||||||||||||||||| ||||| |||||| ||| || |||||||||| |||||| ||||||||||| |||||||||||||||    
T  12103024 tgagttacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 12103120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 36423636 - 36423732
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||| |||||||||||||||||||||||| |||||||||||| ||| || |||||||||| |||||| ||||||||||| |||||| ||||||||    
T  36423636 tgagtcgcgaccaggtcgctctctttaagacgtttcgcggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccagaataaaaca 36423732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 36428708 - 36428804
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||| |||| ||| ||| || |||||||||| |||||| ||||||||||| |||||||||||||||    
T  36428708 tgagtcacgaccaggtcgctctctttaagacgttttgcggaactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 36428804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 36937607 - 36937511
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||  |||||| ||| || |||||||||| |||||| ||||||||||| |||||||||||||||    
T  36937607 tgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 36937511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 36942361 - 36942265
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||  |||||| ||| || |||||||||| |||||| ||||||||||| |||||||||||||||    
T  36942361 tgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 36942265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 287 - 428
Target Start/End: Original strand, 31731535 - 31731676
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggata 385  Q
    ||||||| |||||||||||||||||||| |||||||||||  ||  |||||||||| || |||||||||||||||||||||||  |  | ||||||||||    
T  31731535 taccgggttgagtcacgaccaggtcgctttctttaagacaaatcagggcactacccgaaattgtgcaaggtagactaacaaccgtg-tgcctccaggata 31731633  T
Q  386 aaacagcccagatca-ctgttacgattatatactgcacagtata 428  Q
    ||||||||||| ||| ||||| |||||| ||||||||| |||||    
T  31731634 aaacagcccagttcacctgtt-cgattaaatactgcaccgtata 31731676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 287 - 390
Target Start/End: Original strand, 28857853 - 28857958
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctcttt-aagacatttcgcggcactacccaagtt-gtgcaaggtagactaacaaccacgccgtctccaggat 384  Q
    ||||||| ||||||||||||| |||||| ||||| ||||| |||||||||||||||  |||| ||||||||||||| ||||||||||||| || ||||||    
T  28857853 taccgggttgagtcacgaccaagtcgctttcttttaagacgtttcgcggcactacctgagtttgtgcaaggtagaccaacaaccacgccgcctacaggat 28857952  T
Q  385 aaaaca 390  Q
    ||||||    
T  28857953 aaaaca 28857958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 7451757 - 7451853
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcact-acccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||  || || |||||||||| |||||| ||||||||| | |||||||||||||||    
T  7451757 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgtccaaaattgtgcaaggcagactatcaaccacgctgcctccaggataaaaca 7451853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 32461645 - 32461549
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||| | |||||| ||| || |||||||||  |||||| ||||||||||| |||||||||||||||    
T  32461645 tgagtcacgaccaggtcgctctctttaagacgttttgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaaca 32461549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 39518409 - 39518505
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||| |||||  ||| || ||||||| || |||||| ||||||||||| |||||||||||||||    
T  39518409 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaccgcccaaaattgtgcatggcagactatcaaccacgccgcctccaggataaaaca 39518505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 39523048 - 39523144
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||| |||||  ||| || |||||||||  |||||| ||||||||||| |||||||||||||||    
T  39523048 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcaccgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaaca 39523144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 42001433 - 42001529
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| ||| || ||||| |||  |||||| ||||||||||| |||||||||||||||    
T  42001433 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgtaagacagactatcaaccacgccgcctccaggataaaaca 42001529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 287 - 428
Target Start/End: Complemental strand, 21324069 - 21323928
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcacta-cccaagttgtgcaaggtagactaacaaccacgccgtctccaggata 385  Q
    ||||||| ||||||| |||||||||||| |||||||||||  || |||||||| || || |||||||||||||||||||||||  |  | ||||||||||    
T  21324069 taccgggttgagtcatgaccaggtcgctttctttaagacaaatcacggcactatccgaaattgtgcaaggtagactaacaaccgtg-tgcctccaggata 21323971  T
Q  386 aaacagcccagatca-ctgttacgattatatactgcacagtata 428  Q
    ||||||||||| ||| ||||| |||||| ||||||||| |||||    
T  21323970 aaacagcccagttcacctgtt-cgattaaatactgcaccgtata 21323928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 6514697 - 6514601
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||| ||| ||||||||||||| ||||| |||||| |||||  || ||||||| |||||| ||||||||||| |||||||||||||||    
T  6514697 tgagtcacgaccaagtcactctctttaagacgtttcgtggcactgcccaaaattttgcaaggcagactatcaaccacgccgcctccaggataaaaca 6514601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 10759915 - 10759820
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||||||||||||||| |||||||| ||| | |||||| |||||  |||||||||| |||||| ||||||||||| |||||||||||||||    
T  10759915 tgagtcacgaccaggtcgctct-tttaagacgttttgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 10759820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 12045235 - 12045139
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||| ||||||||||| ||||| |||||| ||| || |||||||||  |||||| | ||||||||| |||||||||||||||    
T  12045235 tgagtcacgaccaggtcgccctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcgaccacgccgcctccaggataaaaca 12045139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 12501995 - 12501899
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||| ||||||||||||||||||||||| ||||| |||||| ||| || ||||||||   |||||| ||||||||||| |||||||||||||||    
T  12501995 tgagtcatgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaaacagactatcaaccacgccgcctccaggataaaaca 12501899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 295 - 394
Target Start/End: Complemental strand, 13301581 - 13301482
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaacagcc 393  Q
    |||||||||||||||||||| |||||||||||  || ||||||||||| || |||||||||||||||||||||||  |  | ||||||||||||||||||    
T  13301581 tgagtcacgaccaggtcgctttctttaagacaaatcacggcactacccaaaattgtgcaaggtagactaacaaccgtg-tgcctccaggataaaacagcc 13301483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 41996664 - 41996760
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||||||||| |||||||||||||| ||||| |||||| ||| || ||||| |||  |||||| ||||||||||| |||||||||||||||    
T  41996664 tgagtcacgaccaggttgctctctttaagacgtttcgtggcactgcccaaaattgtgtaagacagactatcaaccacgccgcctccaggataaaaca 41996760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 294 - 390
Target Start/End: Complemental strand, 12042029 - 12041932
Alignment:
Q  294 atgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||| |||||||||||| ||||| |||||| ||| ||  | ||||||| | |||| ||||||||||| |||||||||||||||    
T  12042029 atgagtcacgaccaggtcgttctctttaagacgtttcgtggcactgcccaaaaatatgcaaggcaaactatcaaccacgccgcctccaggataaaaca 12041932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 3665931 - 3666027
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||| ||||||||||||| ||||| ||||| |||||| ||| || |||||||||| |||||| ||||||||||  ||| |||||||||||    
T  3665931 tgagtcacgactaggtcgctctcttcaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccacctctaggataaaaca 3666027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 12102927 - 12102831
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||| ||||||||||||||||||| ||| | ||||||  ||||  |||||||||| |||||| ||||||| ||||| |||||||||||||    
T  12102927 tgagtcacgactaggtcgctctctttaagactttttgtggcactggccaaaattgtgcaaggaagactatcaaccacaccgtcaccaggataaaaca 12102831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 295 - 388
Target Start/End: Original strand, 40147894 - 40147988
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaa 388  Q
    ||||||| || |||||||||||||||||||  ||||| |||||| |||||  |||||||||  |||||| ||||||||||| |||||||||||||    
T  40147894 tgagtcatgatcaggtcgctctctttaagatgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaa 40147988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 306 - 390
Target Start/End: Complemental strand, 35679960 - 35679875
Alignment:
Q  306 caggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||||||||||||| ||||| ||||||  | ||  |||||||||| |||||| ||||||||||| |||||||||||||||    
T  35679960 caggtcgctctctttaagacgtttcgtggcactgtcaaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 35679875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 37652926 - 37652830
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||| |||||||||||||||||||| ||||| | || |  ||||  |||||||||| |||||| ||||||||||  |||||||||||||||    
T  37652926 tgagtcacgatcaggtcgctctctttaagacgtttcgtgacattgtccaaaattgtgcaaggcagactatcaaccacgccacctccaggataaaaca 37652830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 41587256 - 41587160
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||||||||| |||||||||||||| ||||| | ||||   |||  |||||||||  |||||| ||||||||||| |||||||||||||||    
T  41587256 tgagtcacgaccaggttgctctctttaagacgtttcgtgacactgttcaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaaca 41587160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 290 - 390
Target Start/End: Original strand, 31986721 - 31986822
Alignment:
Q  290 cgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttg-tgcaaggtagactaacaaccacgccgtctccaggataaaa 388  Q
    |||| ||||||||||  |||||||| |||||||||| ||||||| |||||||| ||||  ||||||||||| ||||||   ||||| || ||||||||||    
T  31986721 cgggttgagtcacgataaggtcgctttctttaagacgtttcgcgacactacccgagtttatgcaaggtagattaacaattgcgccgccttcaggataaaa 31986820  T
Q  389 ca 390  Q
    ||    
T  31986821 ca 31986822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 6155515 - 6155419
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcact-acccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||| |||||||||||||||||||| ||||| ||||||  || || || | ||||  |||||| ||||||| ||| |||||||||||||||    
T  6155515 tgagtcacgatcaggtcgctctctttaagacgtttcgtggcactgtccaaaattttacaagacagactatcaaccacaccgcctccaggataaaaca 6155419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 336
Target Start/End: Complemental strand, 20181159 - 20181118
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggca 336  Q
    ||||||||||||||||| ||||||||||||| ||||| ||||    
T  20181159 tgagtcacgaccaggtcactctctttaagacgtttcgtggca 20181118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 346 - 390
Target Start/End: Complemental strand, 37550076 - 37550032
Alignment:
Q  346 ttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||| |||||| ||||||||||  |||||||||||||||    
T  37550076 ttgtgcaaggcagactatcaaccacgccacctccaggataaaaca 37550032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 234; Significance: 1e-129; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 259 - 546
Target Start/End: Original strand, 653006 - 653295
Alignment:
Q  259 ttttgaaattaaaactgccaaaa-gaaaataccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggta 357  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  653006 ttttgaaattaaaactgccaaattgaaaataccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaatttgtgcaaggta 653105  T
Q  358 gactaacaaccacgccgtctccaggataaaacagcccagatcactgttacgattatatactgcacagtatacaaccgctcgtagatatacacctcaaata 457  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  653106 gactaacaaccacgccgtctccaggataaaacagcccagatcactgttacgattatatactgcacagtatacaaccgctcgtagatatacacctcaaata 653205  T
Q  458 tagtttaatcgtttgattaaacta-ttcaacacggtgcgtaaccgttccgattgaaaccgaaagggacagaagaggaggaagaaaagaat 546  Q
    ||||||||||||| ||||| |||| ||||| ||||| ||||||||||| | ||||||| |||||||||||||||||||||||||||||||    
T  653206 tagtttaatcgttcgattatactatttcaatacggtacgtaaccgttctgtttgaaactgaaagggacagaagaggaggaagaaaagaat 653295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 295 - 528
Target Start/End: Complemental strand, 10120904 - 10120670
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaacagccc 394  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10120904 tgagtcacgatcaggtcgctctctttaagacgtttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaatagccc 10120805  T
Q  395 agatcactgttacgattatatactgcacagtatacaaccgctcgtagatatacacctc-aaatatagtttaatcgtttgatta-aactattcaacacggt 492  Q
    |||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||| ||||||||| |||||||| ||||| |||||||||| |||||    
T  10120804 agatcactgttacgattatacactgcacagtatacaatcgctcg-agatatacacctctaaatatagtctaatcgttagattagaactattcaatacggt 10120706  T
Q  493 gcgtaaccgttccgattgaaaccgaaagggacagaa 528  Q
     |||| ||| ||   | |||||||||||||| ||||    
T  10120705 acgtagccgctctattcgaaaccgaaagggatagaa 10120670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 279 - 455
Target Start/End: Complemental strand, 8083139 - 8082962
Alignment:
Q  279 aaagaaaataccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagtt-gtgcaaggtagactaacaaccacgccgtct 377  Q
    ||||||| ||||| | | |||||||| |||||||||||||||||||| |||| |||||||| ||||||| ||||||||||||||||||||| ||||| ||    
T  8083139 aaagaaattaccgagttaagtcacgatcaggtcgctctctttaagacgtttcacggcactatccaagttagtgcaaggtagactaacaaccgcgccgcct 8083040  T
Q  378 ccaggataaaacagcccagatcactgttacgattatatactgcacagtatacaaccgctcgtagatatacacctcaaa 455  Q
    ||| |||||||||||||||||||||||||||||||  ||||||||| |||  || ||||||   ||||||||||||||    
T  8083039 ccaagataaaacagcccagatcactgttacgattacgtactgcacaatatgtaatcgctcgagaatatacacctcaaa 8082962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 8980388 - 8980277
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||    
T  8980388 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataa 8980289  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  8980288 aacagcccagat 8980277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 8985508 - 8985397
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||    
T  8985508 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataa 8985409  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  8985408 aacagcccagat 8985397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 13700502 - 13700613
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||    
T  13700502 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataa 13700601  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  13700602 aacagcccagat 13700613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 21299936 - 21299825
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||    
T  21299936 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataa 21299837  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  21299836 aacagcccagat 21299825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 21305056 - 21304945
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||    
T  21305056 taccggggtgagtcacgaccaggtcgctttctttaagacttttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataa 21304957  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  21304956 aacagcccagat 21304945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 36359286 - 36359397
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||  | ||||||||||||||||| ||||| |||||||||||||||||    
T  36359286 taccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataa 36359385  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  36359386 aacagcccagat 36359397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 39999061 - 39999172
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||  | ||||||||||||||||| ||||| |||||||||||||||||    
T  39999061 taccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataa 39999160  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  39999161 aacagcccagat 39999172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 40004019 - 40004130
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||  | ||||||||||||||||| ||||| |||||||||||||||||    
T  40004019 taccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataa 40004118  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  40004119 aacagcccagat 40004130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 54343195 - 54343306
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||| ||||| |||||||| ||||||||    
T  54343195 taccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccgaattgtgcaaggtagactagcaaccgcgccgtctacaggataa 54343294  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  54343295 aacagcccagat 54343306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 54348349 - 54348460
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||  | ||||||||||||||||| ||||| |||||||||||||||||    
T  54348349 taccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataa 54348448  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  54348449 aacagcccagat 54348460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 54991478 - 54991589
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||    
T  54991478 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataa 54991577  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  54991578 aacagcccagat 54991589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 290 - 398
Target Start/End: Original strand, 36354171 - 36354279
Alignment:
Q  290 cgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaac 389  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||  | ||||||||||||||||| ||||| ||||||||||||||||||||    
T  36354171 cgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaac 36354270  T
Q  390 agcccagat 398  Q
    |||||||||    
T  36354271 agcccagat 36354279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 41393237 - 41393348
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||    
T  41393237 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataa 41393336  T
Q  387 aacagcccagat 398  Q
    |||||| |||||    
T  41393337 aacagcacagat 41393348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 51019476 - 51019365
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||    
T  51019476 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataa 51019377  T
Q  387 aacagcccagat 398  Q
    |||| |||||||    
T  51019376 aacatcccagat 51019365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 53797621 - 53797732
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| || ||||||||||||||||| ||||| |||||||||||||||||    
T  53797621 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaaattgtgcaaggtagactagcaaccgcgccgtctccaggataa 53797720  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  53797721 aacagcccagat 53797732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 287 - 478
Target Start/End: Original strand, 24490023 - 24490216
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagtt-gtgcaaggtagactaacaaccacgccgtctccaggata 385  Q
    ||||||| |||||||||||||| |||||||||||||||| ||||||| |||||  |||||| ||||||||||||||||||||| ||||  ||||||||||    
T  24490023 taccgggttgagtcacgaccagatcgctctctttaagacgtttcgcgacactaatcaagtttgtgcaaggtagactaacaaccgcgccacctccaggata 24490122  T
Q  386 aaacagcccagatcactgttacgattatatactgcacagtatacaaccgctcgtagatatacacctc-aaatatagtttaatcgtttgattaaa 478  Q
    |||||||||| |||||| |||||||||  ||||||||  |||| ||  |||||   ||||||||||| |||||| | ||||| |||||||||||    
T  24490123 aaacagcccatatcactattacgattacgtactgcacgttatataattgctcgagaatatacacctcaaaatatggcttaatagtttgattaaa 24490216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 13695151 - 13695262
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||||||||| |||||||||  ||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||    
T  13695151 taccggggtgagtcacgaccaggtcgctttctttaagatgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataa 13695250  T
Q  387 aacagcccagat 398  Q
    ||||||| ||||    
T  13695251 aacagcctagat 13695262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 13710661 - 13710771
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||| ||||| |||||||||| ||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||    
T  13710661 taccggggtgagtcacgaccag-tcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataa 13710759  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  13710760 aacagcccagat 13710771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 47046410 - 47046299
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||||||| | |||||||||| ||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||    
T  47046410 taccggggtgagtcacgaccaggtcgttttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataa 47046311  T
Q  387 aacagcccagat 398  Q
    |||||| |||||    
T  47046310 aacagctcagat 47046299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 296 - 398
Target Start/End: Complemental strand, 9764115 - 9764013
Alignment:
Q  296 gagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaacagccca 395  Q
    ||||||||||||||||||   ||||||||  ||||| ||||||||| |||||||||||||||||||||||||| | ||||||| ||||||||||||||||    
T  9764115 gagtcacgaccaggtcgcctactttaagatgtttcgtggcactacctaagttgtgcaaggtagactaacaaccgcaccgtctctaggataaaacagccca 9764016  T
Q  396 gat 398  Q
    |||    
T  9764015 gat 9764013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 5271515 - 5271419
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| ||| || |||||||||  |||||| ||||||||||| |||||||||||||||    
T  5271515 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaaca 5271419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 13522088 - 13521992
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| ||| || |||||||||  |||||| ||||||||||| |||||||||||||||    
T  13522088 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaaca 13521992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 16421028 - 16421124
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||| ||||||||||||| |||||| ||| || |||||||||| |||||| ||||||||||| || ||||||||||||    
T  16421028 tgagtcacgaccaggtcgctctcattaagacatttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctacaggataaaaca 16421124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 31269033 - 31269129
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacc-caagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| ||  || |||||||||| |||||| ||||||||||| |||||||||||||||    
T  31269033 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcctaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 31269129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 31273520 - 31273616
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| ||| || |||||||||  |||||| ||||||||||| |||||||||||||||    
T  31273520 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaaca 31273616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 37259973 - 37259877
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactac-ccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||||||||||||| |||||||||| ||||| |||||||| | || |||||||||| |||||| ||||||||||| |||||||||||||||    
T  37259973 tgagtcacgaccaggtcgctttctttaagacgtttcgtggcactactcaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 37259877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 37264660 - 37264564
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| ||| || || ||||||| |||||| ||||||||||| |||||||||||||||    
T  37264660 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattatgcaaggcagactatcaaccacgccgcctccaggataaaaca 37264564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 280 - 390
Target Start/End: Complemental strand, 10318890 - 10318779
Alignment:
Q  280 aagaaaataccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctc 378  Q
    |||||| ||||||| ||||||||||||| |||||||||||||||||||||||||    || ||||| ||||||||||||||||||||||| ||||| |||    
T  10318890 aagaaattaccgggttgagtcacgaccatgtcgctctctttaagacatttcgcgatcgtatccaagtttgtgcaaggtagactaacaaccgcgccgcctc 10318791  T
Q  379 caggataaaaca 390  Q
     |||||| ||||    
T  10318790 taggatagaaca 10318779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 12823991 - 12823895
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||| ||||||||||||||||||||||||||||| |||||| ||| || |||||||||  | |||| ||||||||||| |||||||||||||||    
T  12823991 tgagtcatgaccaggtcgctctctttaagacatttcgtggcactgcccaaaattgtgcaagacaaactatcaaccacgccgcctccaggataaaaca 12823895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 31765885 - 31765981
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||| |||||||| ||||||||||||| ||||| |||||| |||||  |||||||||| |||||| ||||||||||| |||||||||||||||    
T  31765885 tgagtcacaaccaggtcactctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 31765981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 8693710 - 8693806
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||| ||| |||||| || |||||||||  | |||| ||||||||||| ||| |||||||||||    
T  8693710 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcgctacccaaaattgtgcaagacatactatcaaccacgccgcctcaaggataaaaca 8693806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 33463452 - 33463356
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcact-acccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||  || ||||||||||||| ||| |  ||||| ||||| |||||||||||||||    
T  33463452 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgtccaaagttgtgcaaggcagattgtcaaccccgccgcctccaggataaaaca 33463356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 287 - 401
Target Start/End: Original strand, 34644549 - 34644664
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagtt-gtgcaaggtagactaacaaccacgccgtctccaggata 385  Q
    ||||||| |||||||||| || |||||| |||||||||| ||||||| ||||| || |||| ||| |||||| |||||||||| ||||| || |||||||    
T  34644549 taccgggttgagtcacgatcatgtcgctttctttaagacgtttcgcgacactatccgagtttgtgtaaggtaaactaacaaccgcgccgcctacaggata 34644648  T
Q  386 aaacagcccagatcac 401  Q
    ||||||| ||| ||||    
T  34644649 aaacagctcagctcac 34644664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 297 - 390
Target Start/End: Complemental strand, 31729481 - 31729387
Alignment:
Q  297 agtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||| || |||||||||||||||||||| ||||| |||||||||| || |||||||||| |||| | ||| ||||||| |||||||||||||||    
T  31729481 agtcatgatcaggtcgctctctttaagacgtttcgtggcactacccaaaattgtgcaaggcagacaatcaatcacgccgcctccaggataaaaca 31729387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 301 - 405
Target Start/End: Complemental strand, 30564504 - 30564399
Alignment:
Q  301 acgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaacagcccagatc 399  Q
    ||||| |||||||||||| |||||| |||||||||||||||| || |||||||||||||||||||||    |||| ||| ||||||||||||| ||| ||    
T  30564504 acgactaggtcgctctctgtaagacgtttcgcggcactacccaaatttgtgcaaggtagactaacaattgtgccgcctcgaggataaaacagctcagttc 30564405  T
Q  400 actgtt 405  Q
    | ||||    
T  30564404 agtgtt 30564399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 5928315 - 5928219
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactac-ccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||  ||| | |||||| | | || |||||||||| |||||| ||||||| ||| |||||||||||||||    
T  5928315 tgagtcacgaccaggtcgctctctttaagatgtttagtggcactgctcaaaattgtgcaaggcagactatcaaccacaccgcctccaggataaaaca 5928219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 295 - 428
Target Start/End: Complemental strand, 3998152 - 3998019
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaacagcc 393  Q
    |||||||||||||||||||| ||||||||| |  || ||||||||||| || |||||||| ||||||||||||||  |  | ||||||||||||||| ||    
T  3998152 tgagtcacgaccaggtcgctttctttaagataaatcacggcactacccgaaattgtgcaaagtagactaacaaccgtg-tgcctccaggataaaacaacc 3998054  T
Q  394 cagatca-ctgttacgattatatactgcacagtata 428  Q
    ||| ||| ||||| |||||| ||||||||| |||||    
T  3998053 cagttcacctgtt-cgattaaatactgcaccgtata 3998019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 287 - 365
Target Start/End: Original strand, 34560489 - 34560568
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaaca 365  Q
    ||||||| |||||||||||||||||||| |||||||||||  || ||||||||||| || || |||||||||||||||||    
T  34560489 taccgggttgagtcacgaccaggtcgctttctttaagacaaatcacggcactacccgaaattatgcaaggtagactaaca 34560568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 42758851 - 42758756
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaac 389  Q
    ||||||||||||||||||||||||||||||  ||||| |||||| ||| || |||||||||  |||||| |||||||| || |||||| |||||||    
T  42758851 tgagtcacgaccaggtcgctctctttaagatgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgtcgcctccagaataaaac 42758756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 287 - 368
Target Start/End: Original strand, 39319623 - 39319705
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagtt-gtgcaaggtagactaacaacc 368  Q
    ||||||| |||||||||| ||||||||| |||||||||| |||| || |||||| | |||| |||||||||||||||||||||    
T  39319623 taccgggttgagtcacgatcaggtcgctttctttaagacgtttcacgacactactcgagtttgtgcaaggtagactaacaacc 39319705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 33469069 - 33468973
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||| |||||| |||||||||||| ||| | |||||| ||| ||||||||||||| |||||  ||||||||||  ||||| |||||||||    
T  33469069 tgagtcacgactaggtcgttctctttaagacgttttgtggcactgcccaaagttgtgcaaggcagactgtcaaccacgccacctccatgataaaaca 33468973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 51697916 - 51698012
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||||||| ||||||| |||||||| ||||  | |||| | |||  |||||||||| |||||| ||||||||||| |||||||||||||||    
T  51697916 tgagtcacgaccagatcgctctttttaagacgtttcatgacactgctcaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 51698012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 55251719 - 55251814
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||||||||||||||| |||||||| ||||| ||||||  ||||  |||||||||  |||||| ||||||||||  |||||||||||||||    
T  55251719 tgagtcacgaccaggtcgctct-tttaagacgtttcgtggcactgtccaaaattgtgcaagacagactatcaaccacgccacctccaggataaaaca 55251814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 306 - 390
Target Start/End: Complemental strand, 8030561 - 8030476
Alignment:
Q  306 caggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||||||||||||| ||| | |||||| |||||  ||||||||| ||||||| |||| |||| | |||||||||||||||    
T  8030561 caggtcgctctctttaagacgttttgtggcactgcccaaaattgtgcaagatagactatcaacaacgctgcctccaggataaaaca 8030476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 310 - 401
Target Start/End: Original strand, 17359546 - 17359638
Alignment:
Q  310 tcgctctctttaagacatttcgcggcactacccaagtt-gtgcaaggtagactaacaaccacgccgtctccaggataaaacagcccagatcac 401  Q
    ||||| |||||||||| |||| ||||||||||| |||| || |||||||||||||||||  ||||  ||||||||| ||||| ||||| ||||    
T  17359546 tcgctttctttaagacgtttcccggcactacccgagtttgttcaaggtagactaacaactgcgccacctccaggattaaacaacccagttcac 17359638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 32082186 - 32082091
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||||||| || |||| |||||||||||||  ||||||  ||||  |||||||||| | |||| ||||||||||| |||||||||||||||    
T  32082186 tgagtcacgaccagatcactctttttaagacatttcatggcactgtccaaaattgtgcaaggca-actatcaaccacgccgcctccaggataaaaca 32082091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 372
Target Start/End: Complemental strand, 13065864 - 13065786
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgc 372  Q
    ||||||||||| | ||||||||||||||||| ||||  |||||| ||| |||||||| |||| |||||| |||||||||    
T  13065864 tgagtcacgactatgtcgctctctttaagacgtttcatggcactgcccaaagttgtgaaagggagactatcaaccacgc 13065786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 390
Target Start/End: Original strand, 19101978 - 19102072
Alignment:
Q  297 agtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||| ||||| |||| |||||||| ||||| |||||||| |||  ||||||||   |||||| |||||||| || |||||||||||||||    
T  19101978 agtcacgacgaggtcactctgtttaagacgtttcgtggcactactcaaaattgtgcaaaacagactatcaaccacgtcgcctccaggataaaaca 19102072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 368
Target Start/End: Original strand, 41816776 - 41816858
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaacc 368  Q
    ||||||| |||||||||| ||||| ||| |||||||||||   | ||||||||||| || ||||||||||||| |||||||||    
T  41816776 taccgggttgagtcacgatcaggttgctttctttaagacaaaccacggcactacccgaaattgtgcaaggtaggctaacaacc 41816858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 2819843 - 2819939
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||||||||||| | |||||||||  ||||| || |||  ||||  ||||||||||||||||| | |||| ||||  ||||||||||||||    
T  2819843 tgagtcacgaccaggtcgttttctttaagatgtttcgtggtactgtccaaaattgtgcaaggtagactatctaccatgccgcgtccaggataaaaca 2819939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 362
Target Start/End: Original strand, 51697001 - 51697069
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagacta 362  Q
    ||||||||||||||||||||||| ||||||| ||||  |||||| ||| || |||||||||| ||||||    
T  51697001 tgagtcacgaccaggtcgctctccttaagacgtttcatggcactgcccaaaattgtgcaaggcagacta 51697069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 295 - 325
Target Start/End: Complemental strand, 32221193 - 32221163
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagac 325  Q
    |||||||||||||||||||||||||||||||    
T  32221193 tgagtcacgaccaggtcgctctctttaagac 32221163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 390
Target Start/End: Original strand, 16953107 - 16953180
Alignment:
Q  318 tttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||| ||||| || |||||||||  |||||||||| |||||| |||||||  || |||||||||||||||    
T  16953107 tttaagacgtttcgtggtactacccaaaattgtgcaaggcagactatcaaccacaacgcctccaggataaaaca 16953180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 295 - 331
Target Start/End: Original strand, 12878238 - 12878274
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcg 331  Q
    |||||||||| |||||||||||||||||||| |||||    
T  12878238 tgagtcacgatcaggtcgctctctttaagacgtttcg 12878274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 47574624 - 47574720
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||| | |||||||||||||||||||| ||||  | |||||||| || |||||||||  | | || ||| |||||||  ||||||||||||||    
T  47574624 tgagtcacaatcaggtcgctctctttaagacgtttcttgacactacccaaaattgtgcaagacaaaatatcaatcacgccgcatccaggataaaaca 47574720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 201; Significance: 1e-109; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 259 - 546
Target Start/End: Original strand, 19429979 - 19430266
Alignment:
Q  259 ttttgaaattaaaactgccaaaagaaaataccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtag 358  Q
    |||||||||||  ||||||||| |||  ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19429979 ttttgaaattagtactgccaaaggaat-taccgggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaagttgtgcaaggtag 19430077  T
Q  359 actaacaaccacgccgtctccaggataaaacagcccagatcactgttacgattatatactgcacagtatacaaccgctcgtagatatacacctcaaatat 458  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  19430078 actaacaaccacgccgtctctaggataaaacagcccagatcactgttacgattatatactgcacaatatacaatcgctcgtagatatacacctcaaatat 19430177  T
Q  459 agtttaatcgtttgatt-aaactattcaacacggtgcgtaaccgttccgattgaaaccgaaagggacagaagaggaggaagaaaagaat 546  Q
    ||||||||||||||||| ||||||||||| ||||| |||| ||||||   | ||||||||||||||||||||||||| | |||||||||    
T  19430178 agtttaatcgtttgattaaaactattcaatacggtacgtagccgttctattcgaaaccgaaagggacagaagaggagaaggaaaagaat 19430266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 259 - 546
Target Start/End: Original strand, 19435481 - 19435768
Alignment:
Q  259 ttttgaaattaaaactgccaaaagaaaataccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtag 358  Q
    |||||||||||  ||||||||| |||  ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19435481 ttttgaaattagtactgccaaaggaat-taccgggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaagttgtgcaaggtag 19435579  T
Q  359 actaacaaccacgccgtctccaggataaaacagcccagatcactgttacgattatatactgcacagtatacaaccgctcgtagatatacacctcaaatat 458  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  19435580 actaacaaccacgccgtctctaggataaaacagcccagatcactgttacgattatatactgcacaatatacaatcgctcgtagatatacacctcaaatat 19435679  T
Q  459 agtttaatcgtttgatt-aaactattcaacacggtgcgtaaccgttccgattgaaaccgaaagggacagaagaggaggaagaaaagaat 546  Q
    ||||||||||||||||| ||||||||||| ||||| |||| ||||||   | ||||||||||||||||||||||||| | |||||||||    
T  19435680 agtttaatcgtttgattaaaactattcaatacggtacgtagccgttctattcgaaaccgaaagggacagaagaggagaaggaaaagaat 19435768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 259 - 546
Target Start/End: Original strand, 19566128 - 19566415
Alignment:
Q  259 ttttgaaattaaaactgccaaaagaaaataccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtag 358  Q
    |||||||||||  ||||||||| |||  ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19566128 ttttgaaattagtactgccaaaggaat-taccgggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaagttgtgcaaggtag 19566226  T
Q  359 actaacaaccacgccgtctccaggataaaacagcccagatcactgttacgattatatactgcacagtatacaaccgctcgtagatatacacctcaaatat 458  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  19566227 actaacaaccacgccgtctctaggataaaacagcccagatcactgttacgattatatactgcacaatatacaatcgctcgtagatatacacctcaaatat 19566326  T
Q  459 agtttaatcgtttgatt-aaactattcaacacggtgcgtaaccgttccgattgaaaccgaaagggacagaagaggaggaagaaaagaat 546  Q
    ||||||||||||||||| ||||||||||| ||||| |||| ||||||   | ||||||||||||||||||||||||| | |||||||||    
T  19566327 agtttaatcgtttgattaaaactattcaatacggtacgtagccgttctattcgaaaccgaaagggacagaagaggagaaggaaaagaat 19566415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 259 - 546
Target Start/End: Original strand, 19571630 - 19571917
Alignment:
Q  259 ttttgaaattaaaactgccaaaagaaaataccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtag 358  Q
    |||||||||||  ||||||||| |||  ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19571630 ttttgaaattagtactgccaaaggaat-taccgggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaagttgtgcaaggtag 19571728  T
Q  359 actaacaaccacgccgtctccaggataaaacagcccagatcactgttacgattatatactgcacagtatacaaccgctcgtagatatacacctcaaatat 458  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  19571729 actaacaaccacgccgtctctaggataaaacagcccagatcactgttacgattatatactgcacaatatacaatcgctcgtagatatacacctcaaatat 19571828  T
Q  459 agtttaatcgtttgatt-aaactattcaacacggtgcgtaaccgttccgattgaaaccgaaagggacagaagaggaggaagaaaagaat 546  Q
    ||||||||||||||||| ||||||||||| ||||| |||| ||||||   | ||||||||||||||||||||||||| | |||||||||    
T  19571829 agtttaatcgtttgattaaaactattcaatacggtacgtagccgttctattcgaaaccgaaagggacagaagaggagaaggaaaagaat 19571917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 259 - 528
Target Start/End: Complemental strand, 33616857 - 33616587
Alignment:
Q  259 ttttgaaattaaaactgccaaaagaaaataccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtag 358  Q
    |||||||||||| |||||||||||||  || |||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  33616857 ttttgaaattaatactgccaaaagaat-tatcggattgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaagttgtgcaaggtag 33616759  T
Q  359 actaacaaccacgccgtctccaggataaaacagcccagatcactgttacgattatatactgcacagtatacaaccgctcgtagatatacacctc-aaata 457  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  33616758 actaacaaccacgccgtctccaggataaaacagcccagatcactgttacgattatatactgcacagtatacaatcgctcgtagatatacacctcgaaata 33616659  T
Q  458 tagtttaatcgtttgattaaa-ctattcaacacggtgcgtaaccgttccgattgaaaccgaaagggacagaa 528  Q
    ||||||||||||||||||||| |||||||| ||||| |||| ||| ||   | ||||| |||||||||||||    
T  33616658 tagtttaatcgtttgattaaatctattcaatacggtacgtagccgctctattcgaaactgaaagggacagaa 33616587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 19 - 254
Target Start/End: Original strand, 5818940 - 5819177
Alignment:
Q  19 ttaaagcaacaagaaagatgaaataaattcattataatgtgtgtggaccttttgaagtgaaatcattggaag--gtaacttattttgtgtcattcataga 116  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||| ||  ||||||||||||||||||||||||||    
T  5818940 ttaaagcaacaagaaagatgaaataaattcattctaatgtgtgtggatattttgaagtgaaatcattgggagaggtaacttattttgtgtcattcataga 5819039  T
Q  117 tgaattcgtcgtaactattgatatatttgatatcaaataaaagtgatgtctttaaagttttcaagaaaattaaatcgttaacgcaaaatgaatctggtga 216  Q
    ||||||| ||  |||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||| ||||||||||||||||| |||||    
T  5819040 tgaattcatcagaactatggatatatttgatatcaaataaaagtgacgtctttgaagttttcaagaaaattagatcattaacgcaaaatgaatcgggtga 5819139  T
Q  217 agtgattagcagattaagaacatatggtggaggtgaat 254  Q
    |||||||||||||||||||||| |||||||||||||||    
T  5819140 agtgattagcagattaagaacagatggtggaggtgaat 5819177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 290 - 528
Target Start/End: Original strand, 31030523 - 31030763
Alignment:
Q  290 cgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaac 389  Q
    |||| ||||||||||||||||||||||||||||||| ||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  31030523 cgggttgagtcacgaccaggtcgctctctttaagacgtttcgcgacactacccaaattatgcaaggtagactaacaaccacgccgtctccaggataaaac 31030622  T
Q  390 agcccagatcactgttacgattatatactgcacagtatacaaccgctcgtagatatacacctc-aaatatagtttaatcgtttgatt-aaactattcaac 487  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||| |||||||||||     
T  31030623 agcccagatcactgttacgattatatactgcacagtatacaatcgctcgtagatatacacctcgaaatatagtttaatcgttcgattgaaactattcaat 31030722  T
Q  488 acggtgcgtaaccgttccgattgaaaccgaaagggacagaa 528  Q
    ||||| |||| ||| ||   | |||||||||||||||||||    
T  31030723 acggtacgtagccgctctattcgaaaccgaaagggacagaa 31030763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 259 - 437
Target Start/End: Original strand, 13584316 - 13584500
Alignment:
Q  259 ttttgaaattaaaactgccaaaagaaaataccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccca--------agttgtg 350  Q
    |||||||||||  |||||||||   || |||| || ||| ||||||||||||||||||||||||||| |||||||||||||||||        |||||||    
T  13584316 ttttgaaattagtactgccaaag--aattaccaggttgaatcacgaccaggtcgctctctttaagacgtttcgcggcactacccaagttcccaagttgtg 13584413  T
Q  351 caaggtagactaacaaccacgccgtctccaggataaaacagcccagatcactgttacgattatatactgcacagtatacaaccgctc 437  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||    
T  13584414 caaggtagactaacaaccacgccgtctccaggataaaacagttcagatcactgttacgattatatactgcacagtatacaatcgctc 13584500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 32015692 - 32015803
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||  | ||||||||||||||||| ||||| |||||||||||||||||    
T  32015692 taccgggatgagtcacgaccaggtcgctctctttaagacgtttcgtggcactacctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataa 32015791  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  32015792 aacagcccagat 32015803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 287 - 396
Target Start/End: Complemental strand, 42514477 - 42514368
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| ||||||| |||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||    
T  42514477 taccggggtgagtcatgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataa 42514378  T
Q  387 aacagcccag 396  Q
    ||||||||||    
T  42514377 aacagcccag 42514368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 17955892 - 17955781
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||||||||| | |||||||| ||||||||||||||| || ||||||||||||||||| ||||| |||||||||||||||||    
T  17955892 taccggggtgagtcacgaccaggtcgctttttttaagacgtttcgcggcactacctaaattgtgcaaggtagactagcaaccgcgccgtctccaggataa 17955793  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  17955792 aacagcccagat 17955781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 21644184 - 21644073
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| ||| |||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||| ||||| ||||| |||||||||||    
T  21644184 taccggggtgaatcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgactccaggataa 21644085  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  21644084 aacagcccagat 21644073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 24884704 - 24884816
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggat-a 385  Q
    ||||||| |||||||||||||||| ||| |||||||||| ||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |    
T  24884704 taccggggtgagtcacgaccaggtagctttctttaagacgttttgcggcactacctaagttgtgcaaggtagactagcaaccacgccgtctccaggataa 24884803  T
Q  386 aaacagcccagat 398  Q
    |||||||||||||    
T  24884804 aaacagcccagat 24884816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 295 - 398
Target Start/End: Complemental strand, 43999325 - 43999222
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaacagccc 394  Q
    |||||||||| ||||||| | ||||||| || ||||||||||||||| || ||||||||||||||||| ||||  |||||||||||||||||||||||||    
T  43999325 tgagtcacgatcaggtcgttttctttaaaacgtttcgcggcactacctaaattgtgcaaggtagactagcaactgcgccgtctccaggataaaacagccc 43999226  T
Q  395 agat 398  Q
    ||||    
T  43999225 agat 43999222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 31449962 - 31449866
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| ||| || |||||||||  |||||| ||||||||||| |||||||||||||||    
T  31449962 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaaca 31449866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 38182333 - 38182237
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||||||||||||||||||||| || ||||| |||||| |||||| |||||||||| ||| || ||||||||||| |||||||||||||||    
T  38182333 tgagtcacgaccaggtcgctctctttaaaacgtttcgtggcacttcccaagattgtgcaaggcagattatcaaccacgccgcctccaggataaaaca 38182237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 44926019 - 44925923
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||||||||||||||||||||| || ||||| |||||| ||| || |||||||||| |||||| ||||||||||| |||||||||||||||    
T  44926019 tgagtcacgaccaggtcgctctctttaaaacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 44925923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 15875764 - 15875668
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||| ||||||||||||||||||||| ||| ||||| |||||| |||||  |||||||||| |||||| ||||||||||| |||||||||||||||    
T  15875764 tgagttacgaccaggtcgctctctttaggacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 15875668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 19166633 - 19166729
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||| ||||||||||||||||| ||||| |||||| ||| || ||||||| || |||||| ||||||||||| |||||||||||||||    
T  19166633 tgagtcacgaccatgtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcacggcagactatcaaccacgccgcctccaggataaaaca 19166729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 40125981 - 40125885
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||||||| |||||||||||||||| ||||| |||||| ||| || |||||||||| |||||| ||||||||||| ||||| |||||||||    
T  40125981 tgagtcacgaccagatcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaagataaaaca 40125885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 32010530 - 32010584
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacc 341  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  32010530 taccgggatgagtcacgaccaggtcgctctttttaagacatttcgcggcactacc 32010584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 17025934 - 17026030
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaa-gttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| |||||  |||||||||  |||||| ||| |||| || |||||||||||||||    
T  17025934 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaacattgtgcaagacagactatcaatcacgtcgcctccaggataaaaca 17026030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 17556426 - 17556522
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaa-gttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| |||||  |||||||||  |||||| ||| |||| || |||||||||||||||    
T  17556426 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaacattgtgcaagacagactatcaatcacgtcgcctccaggataaaaca 17556522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 18876462 - 18876367
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||||||||||||||| |||||||| ||||| |||||| |||||  |||||||||  |||||| ||||||||||| |||||||||||||||    
T  18876462 tgagtcacgaccaggtcgctct-tttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaaca 18876367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 24090626 - 24090722
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| ||| ||||||||||||| ||| || ||| |||| || ||||| |||||||||    
T  24090626 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaagttgtgcaaggcagaatatcaatcacgtcgcctccaagataaaaca 24090722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 33416546 - 33416642
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||||||||||| |||||||||||| ||||| |||||| ||| || |||||||||  |||||| ||||||||||| ||||| |||||||||    
T  33416546 tgagtcacgaccaggtcggtctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaagataaaaca 33416642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 295 - 388
Target Start/End: Original strand, 1807471 - 1807565
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaa 388  Q
    ||||||||||| ||||||||||||||||||| ||||| | |||| ||| || |||||||||| |||||| ||||||||||| ||| |||||||||    
T  1807471 tgagtcacgactaggtcgctctctttaagacgtttcgtgacactgcccaaaattgtgcaaggcagactatcaaccacgccgcctctaggataaaa 1807565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 43302815 - 43302718
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag--ttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||| |||||| ||||| |||||||||||| ||||| ||||||  ||||   ||||||||||||||||| ||||||||||| |||||||||||||||    
T  43302815 tgagttacgacccggtcgttctctttaagacgtttcgtggcactgtccaaaaattgtgcaaggtagactatcaaccacgccgcctccaggataaaaca 43302718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 34118465 - 34118561
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||  |||||| ||| || |||||||||| |||||| |||||||| || ||  |||||||||||    
T  34118465 tgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaaggcagactatcaaccacgtcgcctttaggataaaaca 34118561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 36683578 - 36683674
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||| ||| ||||||||||||||||||| ||||| |||||| ||| || ||||| |||| |||||| ||||||||| | |||||||||||||||    
T  36683578 tgagtcatgactaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgtaaggcagactatcaaccacgctgcctccaggataaaaca 36683674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 295 - 401
Target Start/End: Original strand, 37771711 - 37771817
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaacagcc 393  Q
    |||||||||||||||||||| |||||||||||  || ||||||||||| || ||||| |||||||||||||||||  |  | ||||||||||||||| ||    
T  37771711 tgagtcacgaccaggtcgctttctttaagacaaatcacggcactacccgaaattgtgaaaggtagactaacaaccgtg-tgcctccaggataaaacaacc 37771809  T
Q  394 cagatcac 401  Q
    ||| ||||    
T  37771810 cagttcac 37771817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 295 - 366
Target Start/End: Complemental strand, 34818794 - 34818722
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaa 366  Q
    |||||||||||||||||||| |||||||||||  || || |||||||| || |||||||||||||||||||||    
T  34818794 tgagtcacgaccaggtcgctttctttaagacaaatcacgacactacccgaaattgtgcaaggtagactaacaa 34818722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 297 - 390
Target Start/End: Complemental strand, 1911063 - 1910969
Alignment:
Q  297 agtcacgaccaggtcgctctctttaagacatttcgcggcacta-cccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||| |||||||||||||||||||| ||||| |||||||  | || |||||||| | |||||| ||||||||| | |||||| ||||||||    
T  1911063 agtcacgatcaggtcgctctctttaagacgtttcgtggcactagtcaaaattgtgcaaagcagactatcaaccacgctgcctccagtataaaaca 1910969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 295 - 388
Target Start/End: Complemental strand, 28559750 - 28559656
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaa 388  Q
    ||||||||||| | |||||||||| |||||| ||||| ||||||  ||||  |||||||||| | |||| |||||||||||||| ||||||||||    
T  28559750 tgagtcacgacaatgtcgctctctataagacgtttcgtggcactgtccaaaattgtgcaaggcaaactatcaaccacgccgtctgcaggataaaa 28559656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 344
Target Start/End: Complemental strand, 40130782 - 40130733
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaa 344  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| |||||    
T  40130782 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaa 40130733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 2965629 - 2965725
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacc-caagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||||||||||||||||||||| || ||||| |||||| ||  || |||||||||  | |||| ||||||| ||| ||| |||||||||||    
T  2965629 tgagtcacgaccaggtcgctctctttaaaacgtttcgtggcactgcctaaaattgtgcaagacacactatcaaccacaccgcctctaggataaaaca 2965725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 17953969 - 17953873
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||| ||||||| |||||| |||||||||| ||||| |||||| |||||  |||||||||  ||| || ||||||||||| ||||| |||||||||    
T  17953969 tgagtaacgaccatgtcgctttctttaagacgtttcgtggcactgcccaaaattgtgcaagacagaatatcaaccacgccgcctccaagataaaaca 17953873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 290 - 368
Target Start/End: Complemental strand, 25368093 - 25368014
Alignment:
Q  290 cgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaacc 368  Q
    |||| ||||||||||||||||| || | |||||||||  || || |||||||| || |||||||||||||||||||||||    
T  25368093 cgggttgagtcacgaccaggtcactttttttaagacaaatcacgacactacccgaaattgtgcaaggtagactaacaacc 25368014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 368
Target Start/End: Complemental strand, 4238411 - 4238337
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaacc 368  Q
    |||||||||||||||||||||||||||| || ||||  |||||| ||| || |||||||||| |||||| |||||    
T  4238411 tgagtcacgaccaggtcgctctctttaacacgtttcatggcactgcccaaaattgtgcaaggcagactatcaacc 4238337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 368
Target Start/End: Complemental strand, 4243150 - 4243076
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaacc 368  Q
    |||||||||||||||||||||||||||| || ||||  |||||| ||| || |||||||||| |||||| |||||    
T  4243150 tgagtcacgaccaggtcgctctctttaacacgtttcatggcactgcccaaaattgtgcaaggcagactatcaacc 4243076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 42157967 - 42157872
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcacta-cccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||| ||| || |||||||||||||| ||||||||| || || |||| |||  |||| || ||| || ||||||||||||||||||||    
T  42157967 tgagtcacgaccaagtcactatctttaagacattttgcggcactatccaaaattgtacaa-atagattatcaatcatgccgtctccaggataaaaca 42157872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 295 - 325
Target Start/End: Complemental strand, 15951617 - 15951587
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagac 325  Q
    |||||||||||||||||||||||||||||||    
T  15951617 tgagtcacgaccaggtcgctctctttaagac 15951587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 346 - 390
Target Start/End: Original strand, 29220315 - 29220359
Alignment:
Q  346 ttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||| ||||||||| | ||| |||||||||||    
T  29220315 ttgtgcaaggtagactatcaaccacgctgcctcaaggataaaaca 29220359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 197; Significance: 1e-107; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 259 - 546
Target Start/End: Original strand, 13021991 - 13022279
Alignment:
Q  259 ttttgaaattaaaactgccaaaagaaaataccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtag 358  Q
    ||||||||| || ||||||||||| || || |||| |||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||    
T  13021991 ttttgaaatcaatactgccaaaaggaattatcgggttgagtcacgaccaggtcgctctttttaaaacgtttcgcggcactacccaagttgtgcaaggtag 13022090  T
Q  359 actaacaaccacgccgtctccaggataaaacagcccagatcactgttacgattatatactgcacagtatacaaccgctcgtagatatacacctcaaatat 458  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  13022091 actaacaaccacgccgtctccaggataaaacagcccagatcactgttacgattatatactgcacagtacacaatcgctcgtagatatacacctcaaatat 13022190  T
Q  459 agtttaatcgtttgatt-aaactattcaacacggtgcgtaaccgttccgattgaaaccgaaagggacagaagaggaggaagaaaagaat 546  Q
     |||||||||||||||| ||||||||||| ||||| |||| ||||||   | |||||||||||| |||||||||||| |||||||||||    
T  13022191 tgtttaatcgtttgattaaaactattcaatacggtacgtagccgttctattcgaaaccgaaaggaacagaagaggagaaagaaaagaat 13022279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 168; E-Value: 9e-90
Query Start/End: Original strand, 259 - 528
Target Start/End: Original strand, 53119492 - 53119762
Alignment:
Q  259 ttttgaaattaaaactgccaaaagaaaataccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtag 358  Q
    |||||||||||  ||||||||| |||  ||||||| |||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  53119492 ttttgaaattagtactgccaaaggaat-taccgggttgagtcacgatcaggtcgctctctttaagacgtttcgcggcactactcaagttgtgcaaggtag 53119590  T
Q  359 actaacaaccacgccgtctccaggataaaacagcccagatcactgttacgattatatactgcacagtatacaaccgctcgtagatatacacctc-aaata 457  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||    
T  53119591 actaacaaccacgccgtctctaggataaaacaggccagatcactgttacgattatatactgcacagtatacaatcgctcgtagatatgcacctcgaaata 53119690  T
Q  458 tagtttaatcgtttgatt-aaactattcaacacggtgcgtaaccgttccgattgaaaccgaaagggacagaa 528  Q
    |||||||||||||||||| ||||||||||| ||||| |||| ||| ||   | |||||||||||||||||||    
T  53119691 tagtttaatcgtttgattaaaactattcaatacggtacgtagccgctctattcgaaaccgaaagggacagaa 53119762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 287 - 525
Target Start/End: Complemental strand, 33089446 - 33089207
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  33089446 taccgggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccctagttgtgcaaggtagactaacaaccacgccgtctctaggataa 33089347  T
Q  387 aacagcccagatcactgttacgattatatactgcacagtatacaaccgctcgtagatatacacctc-aaatatagtttaatcgtttgatt-aaactattc 484  Q
    |||||| ||||||||||||||||||||| | |||||||||||||| |||||| ||||||||||||| ||||||||  |||||||| |||| |||||||||    
T  33089346 aacagctcagatcactgttacgattatacattgcacagtatacaatcgctcg-agatatacacctctaaatatagcctaatcgttcgattaaaactattc 33089248  T
Q  485 aacacggtgcgtaaccgttccgattgaaaccgaaagggaca 525  Q
    || ||||| |||| ||| ||   | ||||||||||||||||    
T  33089247 aatacggtacgtagccgctctattcgaaaccgaaagggaca 33089207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 290 - 528
Target Start/End: Original strand, 20810367 - 20810606
Alignment:
Q  290 cgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaac 389  Q
    |||| |||||||||||||||||| |||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20810367 cgggttgagtcacgaccaggtcgttctctttaagacgtttcgcagcactaccctagttgtgcaaggtagactaacaaccacgccgtctccaggataaaac 20810466  T
Q  390 agcccagatcactgttacgattatatactgcacagtatacaaccgctcgtagatatacacctc-aaatatagtttaatcgtttgatt-aaactattcaac 487  Q
    ||| ||||||| ||||||||||||| |||||||||||||||| |||||| ||||||||||||| ||||||||| |||||||| |||| |||||||| ||     
T  20810467 agctcagatcattgttacgattatacactgcacagtatacaatcgctcg-agatatacacctctaaatatagtctaatcgttcgattaaaactattgaat 20810565  T
Q  488 acggtgcgtaaccgttccgattgaaaccgaaagggacagaa 528  Q
    ||||| |||| ||  |||  | |||||||||| ||||||||    
T  20810566 acggtacgtagccactccattcgaaaccgaaaaggacagaa 20810606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 279 - 449
Target Start/End: Complemental strand, 38437102 - 38436932
Alignment:
Q  279 aaagaaaataccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctc 378  Q
    ||||||| ||||||| |||||||||| |||||| || |||||||||| ||||| ||||||| |||||||||| |||||||||||||||||||||||||||    
T  38437102 aaagaaattaccgggttgagtcacgatcaggtcactttctttaagacgtttcgtggcactatccaagttgtgaaaggtagactaacaaccacgccgtctc 38437003  T
Q  379 caggataaaacagcccagatcactgttacgattatatactgcacagtatacaaccgctcgtagatatacac 449  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||    
T  38437002 caggataaaacagcccagatcattgttacgattatatactgcacagtatacaatcggtcgtagatatacac 38436932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 295 - 501
Target Start/End: Original strand, 26962059 - 26962267
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaacagccc 394  Q
    |||||||||||||| |||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |    
T  26962059 tgagtcacgaccagatcgctctctttaagacgtttcgtggcactacacaagttgtgcaaggtagactaacaaacacgccgtctccaggataaaacagcac 26962158  T
Q  395 agatcactgttacgattatatactgcacagtatacaaccgctcgtagatatacacctcaaa--tatagtttaatcgtttgattaa-actattcaacacgg 491  Q
    |||||||||||||||||||| |||||||| |||| || |||||| ||||||||||||||||  ||| ||||||| |||||||||| || | |||| ||||    
T  26962159 agatcactgttacgattatacactgcacaatatataatcgctcg-agatatacacctcaaaattatggtttaattgtttgattaagaccactcaatacgg 26962257  T
Q  492 tgcgtaaccg 501  Q
    | ||||||||    
T  26962258 tacgtaaccg 26962267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 3477049 - 3476938
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||    
T  3477049 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataa 3476950  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  3476949 aacagcccagat 3476938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 17368711 - 17368822
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||    
T  17368711 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataa 17368810  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  17368811 aacagcccagat 17368822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 20090765 - 20090654
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||  | ||||||||||||||||| ||||| |||||||||||||||||    
T  20090765 taccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataa 20090666  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  20090665 aacagcccagat 20090654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 20095890 - 20095779
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||  | ||||||||||||||||| ||||| |||||||||||||||||    
T  20095890 taccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataa 20095791  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  20095790 aacagcccagat 20095779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 287 - 391
Target Start/End: Original strand, 54270636 - 54270740
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||    
T  54270636 taccggggtgagtcacgaccaggtcgctttctttaagacatttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataa 54270735  T
Q  387 aacag 391  Q
    |||||    
T  54270736 aacag 54270740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 15763133 - 15763022
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |  |||||||||||||||| ||||| |||||||||||||||||    
T  15763133 taccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctgaactgtgcaaggtagactagcaaccgcgccgtctccaggataa 15763034  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  15763033 aacagcccagat 15763022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 34129272 - 34129161
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| || ||||||||||||||||| ||||| |||||||||||||||||    
T  34129272 taccgggctgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaaattgtgcaaggtagactagcaaccgcgccgtctccaggataa 34129173  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  34129172 aacagcccagat 34129161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 295 - 398
Target Start/End: Complemental strand, 4117695 - 4117592
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaacagccc 394  Q
    |||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||| ||||| ||| |||||||||||||||||||||    
T  4117695 tgagtcacgaccaggtcgctttcgttaagacatttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgctgtctccaggataaaacagccc 4117596  T
Q  395 agat 398  Q
    ||||    
T  4117595 agat 4117592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 291 - 398
Target Start/End: Complemental strand, 15768290 - 15768183
Alignment:
Q  291 gggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||  |  |||||||||||||||| ||||| |||||||||||||||||||||    
T  15768290 gggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctgaactgtgcaaggtagactagcaaccgcgccgtctccaggataaaaca 15768191  T
Q  391 gcccagat 398  Q
    ||||||||    
T  15768190 gcccagat 15768183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 295 - 398
Target Start/End: Complemental strand, 3482518 - 3482415
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaacagccc 394  Q
    |||||||||||||||||||| |||||||||| |||||||||| |||| || ||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  3482518 tgagtcacgaccaggtcgctttctttaagacttttcgcggcattacctaatttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagccc 3482419  T
Q  395 agat 398  Q
    ||||    
T  3482418 agat 3482415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 295 - 398
Target Start/End: Original strand, 55128790 - 55128893
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaacagccc 394  Q
    |||||||||||||||||| | |||||||||| ||||||||||||||| |||||||| ||||||||||| ||||| |||||||||||||||||||||||||    
T  55128790 tgagtcacgaccaggtcgttttctttaagacgtttcgcggcactacctaagttgtgtaaggtagactagcaaccgcgccgtctccaggataaaacagccc 55128889  T
Q  395 agat 398  Q
    ||||    
T  55128890 agat 55128893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 17364055 - 17364168
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagt--tgtgcaaggtagactaacaaccacgccgtctccaggat 384  Q
    ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| || |  |||||||||||||||| ||||| |||||||||||||||    
T  17364055 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaaattgtgtgcaaggtagactagcaaccgcgccgtctccaggat 17364154  T
Q  385 aaaacagcccagat 398  Q
    ||||||||||||||    
T  17364155 aaaacagcccagat 17364168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 295 - 398
Target Start/End: Original strand, 17357836 - 17357941
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtg--caaggtagactaacaaccacgccgtctccaggataaaacagc 392  Q
    |||||||||||||||||| | |||||||||| ||||||||||||||| || |||||  |||||||||||| ||||| |||||||||||||||||||||||    
T  17357836 tgagtcacgaccaggtcgatttctttaagacgtttcgcggcactacctaaattgtgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagc 17357935  T
Q  393 ccagat 398  Q
    ||||||    
T  17357936 ccagat 17357941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 290 - 398
Target Start/End: Complemental strand, 30341944 - 30341836
Alignment:
Q  290 cgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaac 389  Q
    |||| ||||||||||||||||| || |||||||||| ||||||||||||||| || ||||| ||||||||||| ||||| | || |||||||||||||||    
T  30341944 cggggtgagtcacgaccaggtcactttctttaagacgtttcgcggcactacctaaattgtgtaaggtagactagcaaccgcaccatctccaggataaaac 30341845  T
Q  390 agcccagat 398  Q
    |||||||||    
T  30341844 agcccagat 30341836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 295 - 405
Target Start/End: Complemental strand, 21494398 - 21494287
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagtt-gtgcaaggtagactaacaaccacgccgtctccaggataaaacagcc 393  Q
    ||||||||||||||||||||||||||||||  | || || || |||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||     
T  21494398 tgagtcacgaccaggtcgctctctttaagatgtatcacgacagtacccaagtttgtgcaaggtagactaacaaccgcgccgtctccgggataaaacagct 21494299  T
Q  394 cagatcactgtt 405  Q
    ||| ||||||||    
T  21494298 cagttcactgtt 21494287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 295 - 392
Target Start/End: Complemental strand, 27605231 - 27605133
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaacagc 392  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||| || ||| ||| |||||||||||||    
T  27605231 tgagtcacgaccaagtcgctctctttaagacatttcgcagcactacccgagtttgtgcaaggtagactaacaactacaccgcctctaggataaaacagc 27605133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 758464 - 758368
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||||||| |||||||||||||||| ||||| |||||||||| || |||||||||| |||||| ||||||||||| |||||||||||||||    
T  758464 tgagtcacgaccagatcgctctctttaagacgtttcgtggcactacccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 758368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 23666219 - 23666123
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| ||| || |||||||||| |||||| ||||||||||| |||||||||||||||    
T  23666219 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 23666123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 24038467 - 24038371
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| ||| || |||||||||| |||||| ||||||||||| |||||||||||||||    
T  24038467 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 24038371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 39775824 - 39775728
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| ||| || |||||||||| |||||| ||||||||||| |||||||||||||||    
T  39775824 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 39775728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 8069677 - 8069772
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||  |||| |||||||||  |||||| ||||||||||| |||||||||||||||    
T  8069677 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgtccaaattgtgcaagacagactatcaaccacgccgcctccaggataaaaca 8069772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 295 - 391
Target Start/End: Complemental strand, 2617352 - 2617255
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagtt-gtgcaaggtagactaacaaccacgccgtctccaggataaaacag 391  Q
    |||||||| |||| |||||| |||||||||| |||||||||||||| | |||| ||||||||||||||||||||| ||||| ||||||||||||||||    
T  2617352 tgagtcacaaccatgtcgctttctttaagacgtttcgcggcactactcgagtttgtgcaaggtagactaacaaccgcgccgcctccaggataaaacag 2617255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 3672583 - 3672679
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||  |||||| ||| || |||||||||| |||||| ||||||||||| |||||||||||||||    
T  3672583 tgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 3672679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 3692615 - 3692711
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||  |||||| ||| || |||||||||| |||||| ||||||||||| |||||||||||||||    
T  3692615 tgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 3692711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 10321434 - 10321546
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggat-a 385  Q
    |||| |||| |||||||||||||||||| |||||||||| ||||||||||||||  || ||||||||||||||||| ||||| ||  |||||||| || |    
T  10321434 taccaggatcagtcacgaccaggtcgctttctttaagacgtttcgcggcactacttaaattgtgcaaggtagactagcaaccgcgttgtctccagaataa 10321533  T
Q  386 aaacagcccagat 398  Q
    |||||||||||||    
T  10321534 aaacagcccagat 10321546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 14438791 - 14438695
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||| ||||||||||| ||||| |||||||||| || |||||||||| |||| | ||||||||||| |||||||||||||||    
T  14438791 tgagtcacgaccaggtcgccctctttaagacgtttcgtggcactacccaaaattgtgcaaggcagacaatcaaccacgccgcctccaggataaaaca 14438695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 18467222 - 18467318
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| ||| || |||||||||| ||||||  |||||||||| |||||||||||||||    
T  18467222 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactattaaccacgccgcctccaggataaaaca 18467318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 20520051 - 20520147
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||| ||||||||||||| ||||| |||||| |||||| |||||||||| |||||| ||||||||||| ||||| |||||||||    
T  20520051 tgagtcacgaccaggtcactctctttaagacgtttcgtggcactgcccaagattgtgcaagggagactatcaaccacgccgcctccaagataaaaca 20520147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 287 - 401
Target Start/End: Complemental strand, 10586286 - 10586172
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggata 385  Q
    ||||||| |||||||||||||||||||| |||||||||||  || ||||||||||| || |||||||||||||||||||||||  |  | ||||||||||    
T  10586286 taccgggttgagtcacgaccaggtcgctttctttaagacaaatcacggcactacccgaaattgtgcaaggtagactaacaaccgtg-tgcctccaggata 10586188  T
Q  386 aaacagcccagatcac 401  Q
    ||||||||||| ||||    
T  10586187 aaacagcccagttcac 10586172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 7571314 - 7571218
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| ||| || |||||||||  |||||| ||| ||||||| |||||||||||||||    
T  7571314 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaatcacgccgcctccaggataaaaca 7571218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 49971520 - 49971424
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcacta-cccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||||||||||| |||||||||||| ||||| ||||||| || || |||||||||| |||||| ||| ||||||| |||||||||||||||    
T  49971520 tgagtcacgaccaggtcgatctctttaagacgtttcgtggcactatccaaaattgtgcaaggcagactatcaatcacgccgcctccaggataaaaca 49971424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 296 - 390
Target Start/End: Original strand, 8883168 - 8883263
Alignment:
Q  296 gagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||||||||||||||||||||||| ||||| |||||| ||| || |||||||||  |||||| ||||||||| | |||||||||||||||    
T  8883168 gagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgctgcctccaggataaaaca 8883263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 3033641 - 3033737
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||  |||||| ||| || |||||||||| |||||| ||||||| ||| ||| |||||||||||    
T  3033641 tgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattgtgcaaggcagactatcaaccacaccgcctcaaggataaaaca 3033737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 3418992 - 3419088
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||| ||||||||||||||||| ||||| |||||| ||| || |||||||||| |||||| ||||||||||  || ||||||||||||    
T  3418992 tgagtcacgaccaagtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccaccttcaggataaaaca 3419088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 411 - 497
Target Start/End: Complemental strand, 38436938 - 38436850
Alignment:
Q  411 tatatactgcacagtatacaaccgctcgtagatatacacctc-aaatatagtttaatcgtttgatt-aaactattcaacacggtgcgta 497  Q
    |||| |||||||||||||||| || || |||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||| ||||    
T  38436938 tatacactgcacagtatacaatcggtcatagatatacacctcgaaatatagtttaatcgtttgattaaaactattcaatacggtacgta 38436850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 32474774 - 32474680
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||| |||||||||||||||||||  ||||| ||||| |||||| |||||  |||||||||  |||||| |||||||||||||||||||||||||||    
T  32474774 tgagccacgaccaggtcgctctct--aagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgtctccaggataaaaca 32474680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 299 - 390
Target Start/End: Complemental strand, 12112733 - 12112641
Alignment:
Q  299 tcacgaccaggtcgctctctttaagacatttcgcggcactacccaa-gttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||| ||||||||||||||||||| ||||| ||||||  |||| ||||||||||  |||||| ||||||| ||| |||||||||||||||    
T  12112733 tcacgactaggtcgctctctttaagacgtttcgtggcactgtccaaagttgtgcaagacagactatcaaccacaccgcctccaggataaaaca 12112641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 12965969 - 12965873
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||| |||||||||||||||||||||| |||   |||||| |||||  |||||||||  |||||| ||||||||||| |||||||||||||||    
T  12965969 tgagtcacaaccaggtcgctctctttaagacgttttatggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaaca 12965873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 295 - 343
Target Start/End: Complemental strand, 25726889 - 25726841
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccca 343  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25726889 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccca 25726841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 297 - 366
Target Start/End: Complemental strand, 1688980 - 1688910
Alignment:
Q  297 agtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaa 366  Q
    |||||||||||||||||| |||||||||| ||| |||||||||||| || |||||||||||||| ||||||    
T  1688980 agtcacgaccaggtcgctttctttaagacgttttgcggcactacccgagtttgtgcaaggtagattaacaa 1688910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 287 - 368
Target Start/End: Original strand, 31002689 - 31002770
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaacc 368  Q
    ||||||| ||||||||||| |||||||| |||||||||||  || ||||||||||| || |||||||||||||||||||||||    
T  31002689 taccgggttgagtcacgac-aggtcgctttctttaagacaaatcacggcactacccgaaattgtgcaaggtagactaacaacc 31002770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 8887927 - 8888023
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcact-acccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||| |  |||||  || || |||||||||  ||| || ||||||||||| |||||||||||||||    
T  8887927 tgagtcacgaccaggtcgctctctttaagacgttttgttgcactgtccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaaca 8888023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 18472005 - 18472100
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||| ||  || || |||||| || ||  |||||||||| |||||| ||||||||||| |||||||||||||||    
T  18472005 tgagtcacgaccaggtcgctctctttacgatgtt-cgtggcactgcctaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 18472100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 29350237 - 29350333
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||| |||||| |||||||||| ||||| |||||| ||| || |||||||||| |||| | | |||| |||| |||||||||||||||    
T  29350237 tgagtcacgaccatgtcgctttctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagaccatctaccatgccgcctccaggataaaaca 29350333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 55431312 - 55431408
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||| |||||||||||||||||||| ||||| | ||||  | ||  || ||||||| |||||| ||||||||||| |||||||||||||||    
T  55431312 tgagtcacgatcaggtcgctctctttaagacgtttcgtgacactgtcaaaaattatgcaaggcagactatcaaccacgccgcctccaggataaaaca 55431408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 397
Target Start/End: Complemental strand, 45904552 - 45904442
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggata 385  Q
    ||||||| ||||||||||||| |||| | |||||||||||  || | ||||||||| || |||||||||||||||||||||||  |  | || |||||||    
T  45904552 taccgggttgagtcacgaccatgtcgttttctttaagacaaatcacagcactacccgaaattgtgcaaggtagactaacaaccgtg-tgccttcaggata 45904454  T
Q  386 aaacagcccaga 397  Q
    ||||||||||||    
T  45904453 aaacagcccaga 45904442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 315 - 388
Target Start/End: Original strand, 26706803 - 26706877
Alignment:
Q  315 ctctttaagacatttcgcggcactacccaagtt-gtgcaaggtagactaacaaccacgccgtctccaggataaaa 388  Q
    |||| |||||| |||||| |||||| ||||||| ||||||||||||||||||||  ||||| |||||||||||||    
T  26706803 ctctctaagacgtttcgcagcactatccaagtttgtgcaaggtagactaacaactgcgccgcctccaggataaaa 26706877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 401
Target Start/End: Complemental strand, 795446 - 795394
Alignment:
Q  349 tgcaaggtagactaacaaccacgccgtctccaggataaaacagcccagatcac 401  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||||| ||||    
T  795446 tgcaaggtagactaacaaccgtgccgcctccaggataaaacagcccagttcac 795394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 29715641 - 29715737
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcact-acccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||||||| ||||||| |||||||| ||||| | ||||  || || |||||| ||| |||||| ||||||||||| ||| |||||||||||    
T  29715641 tgagtcacgaccagatcgctctttttaagacgtttcgtgacactgtccaaaattgtgctaggaagactatcaaccacgccgcctctaggataaaaca 29715737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 295 - 344
Target Start/End: Original strand, 27708875 - 27708924
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaa 344  Q
    |||||||||||||||||| |||||||||||| ||||| |||||| |||||    
T  27708875 tgagtcacgaccaggtcgttctctttaagacgtttcgtggcactgcccaa 27708924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 349 - 390
Target Start/End: Original strand, 27708988 - 27709029
Alignment:
Q  349 tgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||||||| ||||||||||| |||||||||||||||    
T  27708988 tgcaaggtagactatcaaccacgccgcctccaggataaaaca 27709029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 390
Target Start/End: Complemental strand, 12971725 - 12971633
Alignment:
Q  299 tcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||| ||||||||||||| ||||| |||| | ||| || |||||||||  ||| || ||| ||||||| ||| |||||||||||    
T  12971725 tcacgaccaggtctctctctttaagacgtttcgtggcattgcccaaaattgtgcaagacagattatcaatcacgccgcctctaggataaaaca 12971633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 390
Target Start/End: Complemental strand, 23661508 - 23661464
Alignment:
Q  346 ttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||| |||||| ||||||||||| |||||||||||||||    
T  23661508 ttgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 23661464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 397
Target Start/End: Complemental strand, 45905000 - 45904898
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaacagcc 393  Q
    ||||| ||||||| |||||| |||||||||||  || | ||||||||| || ||||||| |||||||||||||||  |  | ||||||||||||||| ||    
T  45905000 tgagttacgaccatgtcgctttctttaagacaaatcacagcactacccgaaattgtgcagggtagactaacaaccgtg-tgcctccaggataaaacaacc 45904902  T
Q  394 caga 397  Q
    ||||    
T  45904901 caga 45904898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 295 - 339
Target Start/End: Complemental strand, 2207803 - 2207759
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcacta 339  Q
    |||||||||||||||||||||| |||||||| ||| | |||||||    
T  2207803 tgagtcacgaccaggtcgctctttttaagacgtttagtggcacta 2207759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 6024127 - 6024171
Alignment:
Q  303 gaccaggtcgctctctttaagacatttcgcggcactacccaagtt 347  Q
    ||||||||| |||| |||||||| ||||||||||||||| |||||    
T  6024127 gaccaggtctctctttttaagacgtttcgcggcactacctaagtt 6024171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 164; Significance: 2e-87; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 259 - 528
Target Start/End: Original strand, 24528319 - 24528589
Alignment:
Q  259 ttttgaaattaaaactgccaaaagaaaataccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtag 358  Q
    |||||||||||  ||||||||| |||  || |||| ||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||    
T  24528319 ttttgaaattagtactgccaaaggaat-tatcgggttgagtcacgaccaggtcgctctctttaagacgttttgcggcattacccaagttgtgcaaggtag 24528417  T
Q  359 actaacaaccacgccgtctccaggataaaacagcccagatcactgttacgattatatactgcacagtatacaaccgctcgtagatatacacctc-aaata 457  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||    
T  24528418 actaacaaccacgccgtctccaggataaaacagctcagatcactgttacgattatatactgcacaatatacaatcgctcgtagatatacacctcgaaata 24528517  T
Q  458 tagtttaatcgtttgatt-aaactattcaacacggtgcgtaaccgttccgattgaaaccgaaagggacagaa 528  Q
    |||||||||||||||||| ||||||||||| ||||| |||| ||| ||   | ||||||| |||||||||||    
T  24528518 tagtttaatcgtttgattaaaactattcaatacggtacgtagccgctctattcgaaaccggaagggacagaa 24528589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 259 - 528
Target Start/End: Complemental strand, 28292632 - 28292364
Alignment:
Q  259 ttttgaaattaaaactgccaaaagaaaataccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtag 358  Q
    |||||||||||  ||||||||| |||  ||||||| | |||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||    
T  28292632 ttttgaaattagtactgccaaaggaat-taccgggttaagtcacgaccaggtcgctct-tttaagacgtttcgcggcactatccaagttgtgcaaggtag 28292535  T
Q  359 actaacaaccacgccgtctccaggataaaacagcccagatcactgttacgattatatactgcacagtatacaaccgctcgtagatatacacctc-aaata 457  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||    
T  28292534 actaacaaccacgccgtctccaggat-aaacagcccagatcactgttacgattatatactgcacagtatacaatcactcgtagatatacacctcgaaata 28292436  T
Q  458 tagtttaatcgtttgatt-aaactattcaacacggtgcgtaaccgttccgattgaaaccgaaagggacagaa 528  Q
    |||||||||||||||||| ||||||||||| ||||| |||| ||| ||   | |||||||||||||||||||    
T  28292435 tagtttaatcgtttgattaaaactattcaatacggtacgtagccgctctattcgaaaccgaaagggacagaa 28292364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 287 - 524
Target Start/End: Original strand, 9973454 - 9973692
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  9973454 taccgggttgagtcacgaccaggtcgctttctttaagacgtttcgcggcactatccaagttgtgcaaggtagacgaacaaccacgccgtctccaggataa 9973553  T
Q  387 aacagcccagatcactgttacgattatatactgcacagtatacaaccgctcgtagatatacacctc-aaatatagtttaatcgtttgatt-aaactattc 484  Q
    |||| ||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||| ||||||||| |||||||| |||| |||||||||    
T  9973554 aacaacccagatcactgttacgattatacactgcacagtatacaatcgctcg-agatatacacctctaaatatagtctaatcgttcgattgaaactattc 9973652  T
Q  485 aacacggtgcgtaaccgttccgattgaaaccgaaagggac 524  Q
    || ||||| |||| ||| ||   | |||||||||||||||    
T  9973653 aatacggtacgtagccgctctattcgaaaccgaaagggac 9973692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 297 - 452
Target Start/End: Original strand, 33226416 - 33226571
Alignment:
Q  297 agtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaacagcccag 396  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||| |||    
T  33226416 agtcacgaccaggtcgctctctttaagacgtttcgcggcactacctaagttatgcaaggtagactaacaaccacgccgtcaccaggataaaacagctcag 33226515  T
Q  397 atcactgttacgattatatactgcacagtatacaaccgctcgtagatatacacctc 452  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  33226516 atcactgttacgattatatactgcacagtatacaatcgctcgtagatatacacctc 33226571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 16539515 - 16539404
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||    
T  16539515 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataa 16539416  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  16539415 aacagcccagat 16539404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 16626147 - 16626258
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||    
T  16626147 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataa 16626246  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  16626247 aacagcccagat 16626258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 33237994 - 33238105
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||  | ||||||||||||||||| ||||| |||||||||||||||||    
T  33237994 taccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataa 33238093  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  33238094 aacagcccagat 33238105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 42571937 - 42572048
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||    
T  42571937 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataa 42572036  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  42572037 aacagcccagat 42572048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 47998967 - 47999078
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||  | ||||||||||||||||| ||||| |||||||||||||||||    
T  47998967 taccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataa 47999066  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  47999067 aacagcccagat 47999078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 295 - 398
Target Start/End: Original strand, 12934397 - 12934500
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaacagccc 394  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  12934397 tgagtcacgaccaggtcgctttctttaagacatttcgcggcactacctgagttgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagccc 12934496  T
Q  395 agat 398  Q
    ||||    
T  12934497 agat 12934500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 33243171 - 33243282
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||  | ||||||||||||||||| ||||| |||||||||||||||||    
T  33243171 taccgggatgagtcacgaccaggtcactctctttaagacgtttcgcggcactacctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataa 33243270  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  33243271 aacagcccagat 33243282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 47993792 - 47993903
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||||||||||  | ||||||||||||||||| ||||| |||||||||||||||||    
T  47993792 taccgggatgagtcacaaccaggtcgctctctttaagacgtttcgcggcactacctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataa 47993891  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  47993892 aacagcccagat 47993903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 2234733 - 2234622
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||||| ||| |||||||||| ||||||||||||||| || ||||||||||||||||| ||||| |||||||||||||||||    
T  2234733 taccggggtgagtcacgaccaggttgctttctttaagacgtttcgcggcactacctaaattgtgcaaggtagactagcaaccgcgccgtctccaggataa 2234634  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  2234633 aacagcccagat 2234622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 32212757 - 32212646
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| || ||||||||||||||||| ||||| ||| |||||||||||||    
T  32212757 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaaattgtgcaaggtagactagcaaccgcgctgtctccaggataa 32212658  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  32212657 aacagcccagat 32212646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 47177222 - 47177111
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||| ||||| |||||||| ||||||||    
T  47177222 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtcttcaggataa 47177123  T
Q  387 aacagcccagat 398  Q
    |||||| |||||    
T  47177122 aacagctcagat 47177111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 295 - 398
Target Start/End: Original strand, 17495403 - 17495506
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaacagccc 394  Q
    |||||||||||||||||||| | |||||||| ||||||||||||||| |||||||||||||||||||| ||||| ||||||||||| |||||||||||||    
T  17495403 tgagtcacgaccaggtcgctttttttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaagataaaacagccc 17495502  T
Q  395 agat 398  Q
    ||||    
T  17495503 agat 17495506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 295 - 398
Target Start/End: Complemental strand, 17557811 - 17557708
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaacagccc 394  Q
    |||||||||||||||||||| | |||||||| ||||||||||||||| |||||||||||||||||||| ||||| ||||||||||| |||||||||||||    
T  17557811 tgagtcacgaccaggtcgctttttttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaagataaaacagccc 17557712  T
Q  395 agat 398  Q
    ||||    
T  17557711 agat 17557708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 43892850 - 43892961
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||||||||| |||||||||| |||| |||||||||| ||||||||||||||| |||| ||||| |||||||||||||||||    
T  43892850 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcacggcactacctaagttgtgcaaggtaaactagcaaccgcgccgtctccaggataa 43892949  T
Q  387 aacagcccagat 398  Q
    |||||| |||||    
T  43892950 aacagctcagat 43892961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 19309713 - 19309603
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||| | ||||||||||| |||||||||| ||||||||||| ||| |||||||||||||||||||| ||||| |||||||||||||||||    
T  19309713 taccggggtgagtc-caaccaggtcgctgtctttaagacgtttcgcggcaccacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataa 19309615  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  19309614 aacagcccagat 19309603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 21081144 - 21081031
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagt--tgtgcaaggtagactaacaaccacgccgtctccaggat 384  Q
    ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| || |  |||||||||||||||| ||||| | |||||||||||||    
T  21081144 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaaattgtgtgcaaggtagactagcaaccgcaccgtctccaggat 21081045  T
Q  385 aaaacagcccagat 398  Q
    ||||||||||||||    
T  21081044 aaaacagcccagat 21081031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 26341198 - 26341294
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||| || |||||||||| |||||| ||||||||||| |||||||||||||||    
T  26341198 tgagtcacgaccaggtcgctctctttaagacatttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 26341294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 4579507 - 4579603
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| ||| || |||||||||| |||||| ||||||||||| |||||||||||||||    
T  4579507 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 4579603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 295 - 388
Target Start/End: Complemental strand, 3357728 - 3357634
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaa 388  Q
    ||||||||||||||||||||||||||||||| |||||||| ||  ||| ||||||||||||| |||||| ||||||||||||||||| |||||||    
T  3357728 tgagtcacgaccaggtcgctctctttaagacgtttcgcggtacagcccaaagttgtgcaaggcagactatcaaccacgccgtctccatgataaaa 3357634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 9651063 - 9650967
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| ||| || |||||||||  |||||| ||||||||||| |||||||||||||||    
T  9651063 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaaca 9650967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 23247029 - 23246933
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||  ||||| |||||| ||| || |||||||||| |||||| ||||||||||| |||||||||||||||    
T  23247029 tgagtcacgaccaggtcgctctctttaagatgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 23246933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 23866067 - 23866163
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| ||| || |||||||||  |||||| ||||||||||| |||||||||||||||    
T  23866067 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaaca 23866163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 287 - 401
Target Start/End: Original strand, 27256234 - 27256348
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggata 385  Q
    ||||||| |||||||||||||||||||| |||||||||||  || ||||||||||| || |||||||||||||||||||||||  |  | ||||||||||    
T  27256234 taccgggttgagtcacgaccaggtcgctttctttaagacaaatcacggcactacccgaaattgtgcaaggtagactaacaaccgtg-tgcctccaggata 27256332  T
Q  386 aaacagcccagatcac 401  Q
    ||||||||||| ||||    
T  27256333 aaacagcccagttcac 27256348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 287 - 362
Target Start/End: Complemental strand, 22857790 - 22857715
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagacta 362  Q
    ||||||| |||||||||| ||||||||| |||||||||| ||||||||||||| | ||||||||||||||||||||    
T  22857790 taccggggtgagtcacgatcaggtcgctttctttaagacgtttcgcggcactatctaagttgtgcaaggtagacta 22857715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 4930232 - 4930328
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| ||| || ||||| |||  | |||| ||||||||||| |||||||||||||||    
T  4930232 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgtaagtcatactatcaaccacgccgcctccaggataaaaca 4930328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 8076049 - 8076145
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacc-caagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| ||  || |||||||||  |||||| ||||||||| | |||||||||||||||    
T  8076049 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcctaaaattgtgcaagacagactatcaaccacgctgcctccaggataaaaca 8076145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 13314332 - 13314236
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||||||| |||||||||||||||| ||||| || ||| ||| || ||||||||||||||||| || ||||| || |||||||||||||||    
T  13314332 tgagtcacgaccagatcgctctctttaagacgtttcgtggtactgcccaaaattgtgcaaggtagactatcagccacgtcgcctccaggataaaaca 13314236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 10388461 - 10388367
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||| | |||| | ||||||||||||| | ||||| | |||| |||||| |||||||||||||||    
T  10388461 tgagtcacgaccaggtcgctctctttaagacgttttgtggcattgcccaagttgtgcatgatagac-atcaacaacgccgcctccaggataaaaca 10388367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 44423233 - 44423137
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcact-acccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||| ||| |||||||||||||||| ||||| |||||| ||| || |||| ||||| |||||| |||| |||||| |||||||||||||||    
T  44423233 tgagtcacgatcagatcgctctctttaagacgtttcgtggcactgaccaaaattgttcaaggcagactatcaactacgccgcctccaggataaaaca 44423137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 8268292 - 8268388
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcact-acccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||| | ||||||  || || |||||||||  |||||| ||||||||||  ||||| |||||||||    
T  8268292 tgagtcacgaccaggtcgctctctttaagacgttttgtggcactgtccaaaattgtgcaagacagactatcaaccacgccacctccatgataaaaca 8268388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 12254078 - 12254174
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaa-gttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||| |||||||||||||||||||||||  ||| | |||||| || || ||||||||||| |||||| ||| ||||||| || ||||||||||||    
T  12254078 tgagtcgcgaccaggtcgctctctttaagatgttttgtggcactgcctaaagttgtgcaaggcagactatcaatcacgccgcctacaggataaaaca 12254174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 44510773 - 44510677
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||||||| | |||||||||||||| ||| | ||||||  ||||  |||||||||  |||||| ||||||||||| |||||||||||||||    
T  44510773 tgagtcacgaccagattgctctctttaagacgttttgtggcactgtccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaaca 44510677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 42627289 - 42627214
Alignment:
Q  299 tcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgcc 373  Q
    ||||||||||||||||||||||||||| ||||| ||||| |||| || |||||||| | |||||| ||||||||||    
T  42627289 tcacgaccaggtcgctctctttaagacgtttcgtggcacaacccaaaattgtgcaaagcagactatcaaccacgcc 42627214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 27238241 - 27238337
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactac-ccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||| | |||||| | | || ||||| |||| |||||| ||| ||||||| || || |||||||||    
T  27238241 tgagtcacgaccaggtcgctctctttaagacgttttgtggcactgctcaaaattgtgtaaggcagactatcaatcacgccgcctgcaagataaaaca 27238337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 287 - 401
Target Start/End: Complemental strand, 40865456 - 40865342
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggata 385  Q
    ||||||| |||||||| ||||||| ||| ||||||||| |  || ||||||||| | || |||||||||||||||||||||||  |  | ||||||||||    
T  40865456 taccgggttgagtcacaaccaggttgctttctttaagataaatcacggcactactcgaaattgtgcaaggtagactaacaaccgtg-tgcctccaggata 40865358  T
Q  386 aaacagcccagatcac 401  Q
    ||||||| ||| ||||    
T  40865357 aaacagcgcagttcac 40865342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 285 - 401
Target Start/End: Original strand, 19640288 - 19640404
Alignment:
Q  285 aataccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagtt-gtgcaaggtagactaacaaccacgccgtctccagga 383  Q
    |||||| || |||||||||| || ||| || |||||||||| |||| || || ||||| |||| |||||||||||||||| ||||  | || ||||||||    
T  19640288 aataccaggttgagtcacgatcatgtctctttctttaagacgtttcacgacattacccgagtttgtgcaaggtagactaagaaccgtg-cgcctccagga 19640386  T
Q  384 taaaacagcccagatcac 401  Q
    ||||||||| ||| ||||    
T  19640387 taaaacagctcagttcac 19640404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 295 - 341
Target Start/End: Original strand, 16372397 - 16372443
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacc 341  Q
    ||||||||||||| ||||||||||||||||  ||||| |||||||||    
T  16372397 tgagtcacgaccaagtcgctctctttaagatgtttcgtggcactacc 16372443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 295 - 388
Target Start/End: Original strand, 29150933 - 29151027
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactac-ccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaa 388  Q
    |||||||||||||| ||||||| |||||||| ||||| | |||| | | || |||||||||| | |||| |||||||| || ||||| |||||||    
T  29150933 tgagtcacgaccagatcgctctttttaagacgtttcgtgacactgctcaaaattgtgcaaggcaaactatcaaccacgtcgcctccaagataaaa 29151027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 344
Target Start/End: Original strand, 30256853 - 30256902
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaa 344  Q
    |||||||||||||| ||||| | |||||||||||||| |||||| |||||    
T  30256853 tgagtcacgaccagatcgctgtttttaagacatttcgtggcactgcccaa 30256902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 346 - 390
Target Start/End: Complemental strand, 6591027 - 6590983
Alignment:
Q  346 ttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||| |||||| ||||||||||| || ||||||||||||    
T  6591027 ttgtgcaaggcagactatcaaccacgccgccttcaggataaaaca 6590983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 25543458 - 25543362
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||| | |||||||| ||||||||||| ||||| || ||| || ||  ||||||||| || |||| |||||||  || |||||||||||||||    
T  25543458 tgagtcacaatcaggtcgcactctttaagacgtttcgtggtactgcctaaaattgtgcaagataaactatcaaccacatcgcctccaggataaaaca 25543362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 161; Significance: 1e-85; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 279 - 478
Target Start/End: Original strand, 1549 - 1749
Alignment:
Q  279 aaagaaaataccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctc 378  Q
    ||||||| || |||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1549 aaagaaattatcgggttaagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctc 1648  T
Q  379 caggataaaacagcccagatcactgttacgattatatactgcacagtatacaaccgctcgtagatatacacctc-aaatatagtttaatcgtttgattaa 477  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||    
T  1649 caggataaaacagcccagatcactgttacgattatatacttcacagtatacaatcgctcatagatatacacctcgaaatatagtttaatcgtttgattaa 1748  T
Q  478 a 478  Q
    |    
T  1749 a 1749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 290 - 528
Target Start/End: Original strand, 7041 - 7281
Alignment:
Q  290 cgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaac 389  Q
    |||| ||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7041 cgggttgagttacgaccaggtcgttctctttaagacgtttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaac 7140  T
Q  390 agcccagatcactgttacgattatatactgcacagtatacaaccgctcgtagatatacacctc-aaatatagtttaatcgtttgatt-aaactattcaac 487  Q
    ||| ||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||| ||||||||||||||||||||||| |||||||||||     
T  7141 agctcagatcactgttacgattatatactacacagtatacaatcgttcgtagatatacacctcgaaatatagtttaatcgtttgattaaaactattcaat 7240  T
Q  488 acggtgcgtaaccgttccgattgaaaccgaaagggacagaa 528  Q
    || || || | ||| ||  || |||||||||||||||||||    
T  7241 acagtacgcatccgctctaatcgaaaccgaaagggacagaa 7281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 149; Significance: 2e-78; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 287 - 497
Target Start/End: Original strand, 19478140 - 19478351
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  19478140 taccgggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccacgataa 19478239  T
Q  387 aacagcccagatcactgttacgattatatactgcacagtatacaaccgctcgtagatatacacctc-aaatatagtttaatcgtttgatt-aaactattc 484  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||| ||||||||| | |||||| |||| |||||||||    
T  19478240 aacagcccagatcactgttacgattatacactgcacagtatacaatcgctcg-agatatacacctcaaaatatagtctgatcgttcgattaaaactattc 19478338  T
Q  485 aacacggtgcgta 497  Q
    || ||||| ||||    
T  19478339 aatacggtacgta 19478351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 287 - 497
Target Start/End: Complemental strand, 13605195 - 13604984
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| ||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13605195 taccgggttgagtcacgactaggttgctctctttaagacgtttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 13605096  T
Q  387 aacagcccagatcactgttacgattatatactgcacagtatacaaccgctcgtagatatacacctc-aaatatagtttaatcgtttgatt-aaactattc 484  Q
    ||||||||| |||||||||||||||||| |||||||| ||||||| | |||| ||||||||||||| ||||||||| |||||||| |||| |||||||||    
T  13605095 aacagcccaaatcactgttacgattatacactgcacaatatacaatcactcg-agatatacacctctaaatatagtctaatcgttcgattaaaactattc 13604997  T
Q  485 aacacggtgcgta 497  Q
    || ||||| ||||    
T  13604996 aatacggtacgta 13604984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 290 - 455
Target Start/End: Complemental strand, 31495941 - 31495777
Alignment:
Q  290 cgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaac 389  Q
    |||| |||||||||| ||||| |||| |||||| |  ||| ||||||||||  || || ||||| ||| |||||||||||||||||||||||||||||||    
T  31495941 cgggttgagtcacgatcaggttgctcactttaacatgtttggcggcactacttaaattatgcaaagtaaactaacaaccacgccgtctccaggataaaac 31495842  T
Q  390 agcccagatcactgttacgattatatactgcacagtatacaaccgctcgtagatatacacctcaaa 455  Q
    ||||||||||||||||||||||| ||||||||||||||| || |||||| ||||||||||||||||    
T  31495841 agcccagatcactgttacgattacatactgcacagtatataatcgctcg-agatatacacctcaaa 31495777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 290 - 455
Target Start/End: Complemental strand, 31501327 - 31501163
Alignment:
Q  290 cgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaac 389  Q
    |||| |||||||||| ||||| |||| |||||| |  ||| ||||||||||  || || ||||| ||| |||||||||||||||||||||||||||||||    
T  31501327 cgggttgagtcacgatcaggttgctcactttaacatgtttggcggcactacttaaattatgcaaagtaaactaacaaccacgccgtctccaggataaaac 31501228  T
Q  390 agcccagatcactgttacgattatatactgcacagtatacaaccgctcgtagatatacacctcaaa 455  Q
    ||||||||||||||||||||||| ||||||||||||||| || |||||| ||||||||||||||||    
T  31501227 agcccagatcactgttacgattacatactgcacagtatataatcgctcg-agatatacacctcaaa 31501163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 22698346 - 22698235
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||  | ||||||||||||||||| ||||| |||||||||||||||||    
T  22698346 taccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataa 22698247  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  22698246 aacagcccagat 22698235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 295 - 455
Target Start/End: Complemental strand, 31515826 - 31515667
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaacagccc 394  Q
    |||||||||| ||||| |||| |||||| |  ||| ||||||||||  || || ||||| ||| |||||||||||||||||||||||||||||||||||     
T  31515826 tgagtcacgatcaggttgctcactttaacatgtttggcggcactacttaaattatgcaaagtaaactaacaaccacgccgtctccaggataaaacagcct 31515727  T
Q  395 agatcactgttacgattatatactgcacagtatacaaccgctcgtagatatacacctcaaa 455  Q
    |||||||||||||||||| ||||||||||||||| || |||||| ||||||||||||||||    
T  31515726 agatcactgttacgattacatactgcacagtatataatcgctcg-agatatacacctcaaa 31515667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 21396691 - 21396802
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||| ||||| |||| ||||||||||||    
T  21396691 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccatctccaggataa 21396790  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  21396791 aacagcccagat 21396802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 24192583 - 24192472
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||||||||| |||||||||| |||||||||||||||  ||||||||||||||||||| ||||| |||||||||||||||||    
T  24192583 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctgagttgtgcaaggtagactagcaaccgcgccgtctccaggataa 24192484  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  24192483 aacagcccagat 24192472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 29491340 - 29491229
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| ||||||||||||| |||||| |||||||||| ||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||    
T  29491340 taccggggtgagtcacgaccaagtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataa 29491241  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  29491240 aacagcccagat 29491229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 34142072 - 34142183
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||||||||| |||||||||| ||||| ||| |||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  34142072 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgtggctctacccaagttgtgcaaggtagactagcaaccgcgccgtctccaggataa 34142171  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  34142172 aacagcccagat 34142183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 34154688 - 34154799
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||||||||| |||||||||| ||||| ||| |||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  34154688 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgtggctctacccaagttgtgcaaggtagactagcaaccgcgccgtctccaggataa 34154787  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  34154788 aacagcccagat 34154799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 282 - 398
Target Start/End: Original strand, 31981547 - 31981663
Alignment:
Q  282 gaaaataccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccag 381  Q
    |||| ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| || ||||||||||||||||| ||||| ||||||||||||    
T  31981547 gaaattaccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaaattgtgcaaggtagactagcaaccgcgccgtctccag 31981646  T
Q  382 gataaaacagcccagat 398  Q
    |||||||||| ||||||    
T  31981647 gataaaacaggccagat 31981663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 24191486 - 24191375
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||||||||| |||||||||| |||||||||||||||  |||||||||||||||||||  |||| |||||||||||||||||    
T  24191486 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctgagttgtgcaaggtagactagtaaccgcgccgtctccaggataa 24191387  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  24191386 aacagcccagat 24191375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 287 - 384
Target Start/End: Original strand, 21401747 - 21401844
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggat 384  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||| ||||||||||| ||||| |||||||||||||||    
T  21401747 taccgggatgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtggaaggtagactagcaaccgcgccgtctccaggat 21401844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 290 - 398
Target Start/End: Original strand, 34375914 - 34376022
Alignment:
Q  290 cgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaac 389  Q
    |||| |||||||||| ||||||||| |||||||||| ||||||||||||||| ||||||||||| ||||| || ||||| ||||||||||||||||||||    
T  34375914 cggggtgagtcacgatcaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaacgtagattagcaaccgcgccgtctccaggataaaac 34376013  T
Q  390 agcccagat 398  Q
    |||||||||    
T  34376014 agcccagat 34376022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 22703469 - 22703358
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| ||||||||||  | |||| | |||||||||| ||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||    
T  22703469 taccggggtgagtcacgattatgtcgttttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataa 22703370  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  22703369 aacagcccagat 22703358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 287 - 478
Target Start/End: Complemental strand, 17281667 - 17281474
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggata 385  Q
    ||||||| |||||||||| || |||||| |||||||||| ||||||||||||||||  | ||||| ||||||||||||||||| |  || ||  ||||||    
T  17281667 taccgggttgagtcacgagcatgtcgctttctttaagacgtttcgcggcactacccgtatttgtgtaaggtagactaacaaccgcatcgcctttaggata 17281568  T
Q  386 aaacagcccagatcactgttacgattatatactgcacagtatacaaccgctcgtagatatacacctc-aaatatagtttaatcgtttgattaaa 478  Q
    |||||||||| ||||||||||| | ||| ||||||||| |||  || ||||||   ||||||||||| |||||| | |||||||||||||||||    
T  17281567 aaacagcccaaatcactgttacaactatgtactgcacaatatgtaatcgctcgagaatatacacctcaaaatatggattaatcgtttgattaaa 17281474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 295 - 402
Target Start/End: Complemental strand, 12183096 - 12182988
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaacagcc 393  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||| || || |||||| ||||||||||     
T  12183096 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaagtttgtgcaatgtagactaacaaccgcgtcgcctccagaataaaacagct 12182997  T
Q  394 cagatcact 402  Q
    || ||||||    
T  12182996 catatcact 12182988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 287 - 405
Target Start/End: Original strand, 3901904 - 3902023
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggata 385  Q
    ||||||| ||||||||||||||||||||||||||||||| ||| ||||||||| ||||| |||||||||||||| || ||||| ||||| ||||||||||    
T  3901904 taccgggttgagtcacgaccaggtcgctctctttaagacgttttgcggcactatccaagtttgtgcaaggtagaataccaaccgcgccgcctccaggata 3902003  T
Q  386 aaacagcccagatcactgtt 405  Q
    ||| || | |||||||||||    
T  3902004 aaatagtctagatcactgtt 3902023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 290 - 417
Target Start/End: Complemental strand, 31476115 - 31475988
Alignment:
Q  290 cgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaac 389  Q
    |||| |||||||||| ||||| |||| ||||||||  ||| |||||||||   ||||| ||||||||  |||||||||||||||||||||||||||||||    
T  31476115 cgggttgagtcacgatcaggttgctcactttaagatgtttggcggcactatttaagttatgcaaggtcaactaacaaccacgccgtctccaggataaaac 31476016  T
Q  390 agcccagatcactgttacgattatatac 417  Q
    ||| ||||||||||||||||||| ||||    
T  31476015 agctcagatcactgttacgattacatac 31475988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 299 - 398
Target Start/End: Complemental strand, 2818238 - 2818139
Alignment:
Q  299 tcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaacagcccagat 398  Q
    |||||||||||||||| |||||||||| ||| |||  |||||| ||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||    
T  2818238 tcacgaccaggtcgctttctttaagacgttttgcgttactacctaagttgtgcaaggtagactagaaaccgcgccgtctccaggataaaacagctcagat 2818139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 287 - 402
Target Start/End: Original strand, 10642701 - 10642817
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggata 385  Q
    ||||||| ||||||||||| | |||||| |||||||||| ||||| ||||||| || || ||||||||||||||||||||||| ||||| |||| |||||    
T  10642701 taccgggttgagtcacgacaatgtcgctttctttaagacgtttcgtggcactatccgaggttgtgcaaggtagactaacaaccgcgccgcctcccggata 10642800  T
Q  386 aaacagcccagatcact 402  Q
    ||||| ||||| |||||    
T  10642801 aaacatcccagttcact 10642817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 295 - 391
Target Start/End: Complemental strand, 5601068 - 5600971
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaacag 391  Q
    |||||||||||||||||||| |||||||||| ||||||| |||||||| || ||||| |||||||| |||||||| ||||| ||||| ||||||||||    
T  5601068 tgagtcacgaccaggtcgctttctttaagacgtttcgcgacactacccgagtttgtgtaaggtagaataacaaccgcgccgcctccaagataaaacag 5600971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 11570845 - 11570749
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||| |||||||||||||||||||||| ||||| |||||| ||| || |||||||||| |||| | ||||||||||| |||||||||||||||    
T  11570845 tgagtcacaaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagacaatcaaccacgccgcctccaggataaaaca 11570749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 287 - 405
Target Start/End: Original strand, 29325527 - 29325646
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagtt-gtgcaaggtagactaacaaccacgccgtctccaggata 385  Q
    ||||||| |||||||||| || |||||||| |||||||| |||  || ||||||| ||||| ||||||||||||||||||||   | || ||||| ||||    
T  29325527 taccgggttgagtcacgatcaagtcgctctttttaagacgttttacgacactacctaagtttgtgcaaggtagactaacaactgtgacgcctccaagata 29325626  T
Q  386 aaacagcccagatcactgtt 405  Q
    ||| ||||||||||||||||    
T  29325627 aaatagcccagatcactgtt 29325646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 6407956 - 6407860
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||| |||||||||||||| ||||| ||||| |||||| ||| || |||| ||| | |||||| ||||||||||| |||||||||||||||    
T  6407956 tgagtcacgatcaggtcgctctcttgaagacgtttcgtggcactgcccaaaattgtacaaagcagactatcaaccacgccgcctccaggataaaaca 6407860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 12688970 - 12689066
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||| ||||||||| ||||||||||||| ||| | |  ||| |||||  |||||||||| |||||| |||||||||||||||||||||||||||    
T  12688970 tgagtcatgaccaggtcactctctttaagacgttttgtgatactgcccaaaattgtgcaaggcagactatcaaccacgccgtctccaggataaaaca 12689066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 24589260 - 24589164
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||| ||| ||||||||||||| || ||||| | ||||  ||||  ||||||||| ||||||| |||||||||||||||||||||||||||    
T  24589260 tgagtcacgatcagatcgctctctttaaaacgtttcgtgacactttccaaaattgtgcaagatagactatcaaccacgccgtctccaggataaaaca 24589164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 33687699 - 33687603
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||| || |||||||||||||||||||||| ||||| ||||||  ||||  |||||||||  |||||| |||||| ||||||||||||||||||||    
T  33687699 tgagttaccaccaggtcgctctctttaagacgtttcgtggcactggccaaaattgtgcaagacagactatcaaccatgccgtctccaggataaaaca 33687603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 2700202 - 2700106
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcact-acccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||||||| |||||||||||||||| ||||| ||||||   | || |||||||||  |||||| |||||||||||  ||||||||||||||    
T  2700202 tgagtcacgaccagatcgctctctttaagacgtttcgtggcactgttcaaaattgtgcaagacagactatcaaccacgccgcttccaggataaaaca 2700106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 8747781 - 8747877
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| || || | |||| ||| || |||||||||  || ||| |||| |||||| |||||||||||||||    
T  8747781 tgagtcacgaccaggtcgctctctttaagacgttccgtgacactgcccaaaattgtgcaagacaggctatcaacaacgccgcctccaggataaaaca 8747877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 12406449 - 12406353
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacc-caagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||| ||||| ||||| |||| | ||  ||||||||||||| |||||| ||| ||||||| || || |||||||||    
T  12406449 tgagtcacgaccaggtcgctctcttaaagacgtttcgtggcagtgcctaaagttgtgcaaggaagactatcaatcacgccgccttcatgataaaaca 12406353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 21309030 - 21309126
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||| ||||  |||||||||||||||| ||||  |||||| |||||  |||||||| | |||||| ||||||||||| |||||||||||||||    
T  21309030 tgagtcactaccatatcgctctctttaagacgtttcatggcactgcccaaaattgtgcaatgcagactatcaaccacgccgcctccaggataaaaca 21309126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 11428042 - 11428104
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc--aagttgtgcaagg 355  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| |||  |||||||||||||    
T  11428042 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaagttgtgcaagg 11428104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 316 - 390
Target Start/End: Complemental strand, 17964634 - 17964559
Alignment:
Q  316 tctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||| ||||| ||||||| ||||  |||||||||| |||||| ||||||||||| |||||||||||||||    
T  17964634 tctttaagacgtttcgtggcactatccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 17964559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 287 - 388
Target Start/End: Complemental strand, 5740894 - 5740792
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggata 385  Q
    ||||||| ||||||| ||| ||||| ||||||||||||| |||| || |||||| |||| ||||||||||| ||||| ||||| ||||| | | ||||||    
T  5740894 taccgggttgagtcatgactaggtcactctctttaagacgtttcacgacactactcaagtttgtgcaaggtggactatcaaccgcgccgccactaggata 5740795  T
Q  386 aaa 388  Q
    |||    
T  5740794 aaa 5740792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 290 - 405
Target Start/End: Complemental strand, 11956802 - 11956686
Alignment:
Q  290 cgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaa 388  Q
    |||| ||||||| ||||||||||||||||||||||| ||||  |  |||  | ||| |||||||||||||||||||||| || ||  ||||| | |||||    
T  11956802 cgggttgagtcatgaccaggtcgctctctttaagacgtttcatgatacttacgaagtttgtgcaaggtagactaacaacaacaccacctccaagttaaaa 11956703  T
Q  389 cagcccagatcactgtt 405  Q
    || ||||| ||||||||    
T  11956702 catcccagttcactgtt 11956686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 316 - 390
Target Start/End: Complemental strand, 16836231 - 16836156
Alignment:
Q  316 tctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||| ||||| |||||| |||||  |||| ||||| |||||| ||||||||||| |||||||||||||||    
T  16836231 tctttaagacgtttcgtggcactgcccaaaattgtacaaggcagactatcaaccacgccgcctccaggataaaaca 16836156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 306 - 402
Target Start/End: Original strand, 22713705 - 22713802
Alignment:
Q  306 caggtcgctctctttaagacatttcgcggcactacccaagtt-gtgcaaggtagactaacaaccacgccgtctccaggataaaacagcccagatcact 402  Q
    |||||| ||||||||||||| ||| || ||||||| | |||| ||||||| ||||||||||||| ||||  || |||||||||| ||| ||| |||||    
T  22713705 caggtcactctctttaagacgttttgcagcactactcgagtttgtgcaagatagactaacaaccgcgccaccttcaggataaaatagctcagttcact 22713802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 390
Target Start/End: Complemental strand, 11614136 - 11614092
Alignment:
Q  346 ttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||| |||||| ||||||||||| |||||||||||||||    
T  11614136 ttgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 11614092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 13736774 - 13736678
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||| | |||||||| ||||||||| ||| ||||| |||||| || ||  |||||||||| |||||| ||||||| | | |||||||||||||||    
T  13736774 tgagtcgccaccaggtccctctctttacgacgtttcgtggcactgcctaaaattgtgcaaggaagactaccaaccacactgcctccaggataaaaca 13736678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 287 - 325
Target Start/End: Complemental strand, 6728438 - 6728400
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagac 325  Q
    ||||||| |||||||||||||||||||| ||||||||||    
T  6728438 taccggggtgagtcacgaccaggtcgctttctttaagac 6728400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 344
Target Start/End: Original strand, 19674312 - 19674361
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaa 344  Q
    ||||||||||||||||| ||||||||||||| ||||  |||||| |||||    
T  19674312 tgagtcacgaccaggtcactctctttaagacgtttcatggcactgcccaa 19674361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 295 - 331
Target Start/End: Complemental strand, 11534774 - 11534738
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcg 331  Q
    ||||||| ||||||||||||||||||||||| |||||    
T  11534774 tgagtcaagaccaggtcgctctctttaagacgtttcg 11534738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 295 - 331
Target Start/End: Complemental strand, 11560284 - 11560248
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcg 331  Q
    ||||||| ||||||||||||||||||||||| |||||    
T  11560284 tgagtcaagaccaggtcgctctctttaagacgtttcg 11560248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 29892357 - 29892261
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||  |||||||||||||||||||  ||| | |||||| ||| || |||||||||  | |||| ||||||| ||  |||||||||||||||    
T  29892357 tgagtcacggtcaggtcgctctctttaagaagtttggtggcactgcccaaaattgtgcaagacaaactatcaaccacacctcctccaggataaaaca 29892261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 137; Significance: 3e-71; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 290 - 528
Target Start/End: Original strand, 42914637 - 42914876
Alignment:
Q  290 cgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaac 389  Q
    |||| |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  42914637 cgggttgagtcacgaccaggtcgttctctttaagacgtttcgcggcactacctaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaac 42914736  T
Q  390 agcccagatcactgttacgattatatactgcacagtatacaaccgctcgtagatatacacctca-aatatagtttaatcgtttgattaaa-ctattcaac 487  Q
    |||||| |||||||||||||||||| |||||| ||||||||| |||||| |||||||||||||  ||||||||||||||||| ||||||| ||||| ||     
T  42914737 agcccaaatcactgttacgattatacactgcatagtatacaatcgctcg-agatatacacctctgaatatagtttaatcgttcgattaaaactatttaat 42914835  T
Q  488 acggtgcgtaaccgttccgattgaaaccgaaagggacagaa 528  Q
    |||||  ||| ||| ||   | |||||||||||||||||||    
T  42914836 acggtatgtagccgctctattcgaaaccgaaagggacagaa 42914876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 295 - 528
Target Start/End: Original strand, 5089278 - 5089512
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaacagccc 394  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  5089278 tgagtcatgaccaggtcgctctctttaagacgtttcgcggcactatccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaacagcct 5089377  T
Q  395 agatcactgttacgattatatactgcacagtatacaaccgctcgtagatatacacctc-aaatatagtttaatcgtttgatt-aaactattcaacacggt 492  Q
    | |||||||||||||||||| |||||||||||||||| |||||| ||||||||||||| ||||||||| |||||||| |||| ||| ||||||| |||||    
T  5089378 aaatcactgttacgattatacactgcacagtatacaatcgctcg-agatatacacctctaaatatagtctaatcgttcgattaaaaatattcaatacggt 5089476  T
Q  493 gcgtaaccgttccgattgaaaccgaaagggacagaa 528  Q
     |||| ||| ||   | |||||| ||||||||||||    
T  5089477 acgtagccgctctattagaaaccaaaagggacagaa 5089512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 42723554 - 42723443
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||  | ||||||||||||||||| ||||| |||||||||||||||||    
T  42723554 taccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataa 42723455  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  42723454 aacagcccagat 42723443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 42728723 - 42728612
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||  | ||||||||||||||||| ||||| |||||||||||||||||    
T  42728723 taccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataa 42728624  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  42728623 aacagcccagat 42728612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 44096294 - 44096405
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||  | ||||||||||||||||| ||||| |||||||||||||||||    
T  44096294 taccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataa 44096393  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  44096394 aacagcccagat 44096405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 44754699 - 44754588
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||  | ||||||||||||||||| ||||| |||||||||||||||||    
T  44754699 taccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataa 44754600  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  44754599 aacagcccagat 44754588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 44759865 - 44759754
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||  | ||||||||||||||||| ||||| |||||||||||||||||    
T  44759865 taccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataa 44759766  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  44759765 aacagcccagat 44759754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 40518575 - 40518464
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| || | ||||||||||||||| ||||| |||||||||||||||||    
T  40518575 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaaatagtgcaaggtagactagcaaccgcgccgtctccaggataa 40518476  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  40518475 aacagcccagat 40518464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 28751832 - 28751721
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||||||||| ||||| |||| ||||||||||||||| |||||||||||||||||| | ||||| | |||||||||||||||    
T  28751832 taccggggtgagtcacgaccaggtcgctttcttttagacgtttcgcggcactacctaagttgtgcaaggtagacaagcaaccgcaccgtctccaggataa 28751733  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  28751732 aacagcccagat 28751721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 290 - 395
Target Start/End: Original strand, 40392314 - 40392419
Alignment:
Q  290 cgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaac 389  Q
    |||| ||||||||||||||   | | |||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  40392314 cggggtgagtcacgaccagactgttttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccacgccgtctccaggataaaac 40392413  T
Q  390 agccca 395  Q
    ||||||    
T  40392414 agccca 40392419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 10160820 - 10160724
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| ||| || |||||||||| |||||| ||||||||||| |||||||||||||||    
T  10160820 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 10160724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 30658262 - 30658358
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactac-ccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||| | || |||||||||| |||||| ||||||||||| |||||||||||||||    
T  30658262 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactactcaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 30658358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 1935089 - 1934993
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| ||| || |||||||||  |||||| ||||||||||| |||||||||||||||    
T  1935089 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaaca 1934993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 9180820 - 9180724
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcact-acccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||  || || |||||||||| |||||| ||||||||||| |||||||||||||||    
T  9180820 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgtccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 9180724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 18344430 - 18344526
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| ||| || |||||||||| ||||||  |||||||||| |||||||||||||||    
T  18344430 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactattaaccacgccggctccaggataaaaca 18344526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 287 - 367
Target Start/End: Original strand, 19538377 - 19538458
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaac 367  Q
    ||||||| |||||||||||||||||||| ||||||||||||||| |||||||| || || ||||||||||||||||||||||    
T  19538377 taccgggttgagtcacgaccaggtcgctttctttaagacatttcacggcactatccgagtttgtgcaaggtagactaacaac 19538458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 9189899 - 9189803
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||||||||| |||||||||||||| ||||| ||||||  ||||  |||||||||| |||||| ||||||||||| |||||||||||||||    
T  9189899 tgagtcacgaccaggttgctctctttaagacgtttcgtggcactgtccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 9189803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 30650928 - 30651024
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||||||| |||||||||||||||| ||||| |||||| ||| || |||||||||| |||||| ||||||||||| ||||| |||||||||    
T  30650928 tgagtcacgaccagatcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaagataaaaca 30651024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 287 - 428
Target Start/End: Complemental strand, 6297989 - 6297848
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggata 385  Q
    ||||||| |||||||||||||||||||| |||||||||||  || ||||||||||| || |||||||||||||||||||||||  |  | ||||||||||    
T  6297989 taccgggttgagtcacgaccaggtcgctttctttaagacaaatcacggcactacccgaaattgtgcaaggtagactaacaaccgtg-tgcctccaggata 6297891  T
Q  386 aaacagcccagatca-ctgttacgattatatactgcacagtata 428  Q
    ||||| || || ||| ||||| |||||| ||||||||| |||||    
T  6297890 aaacatcctagttcacctgtt-cgattaaatactgcaccgtata 6297848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 12796924 - 12797020
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||||||| |||||||||||||||| ||| | |||||| ||| || |||| ||||  |||||| |||||||||||||||||||||||||||    
T  12796924 tgagtcacgaccagatcgctctctttaagacgttttgtggcactgcccaaaattgttcaagacagactatcaaccacgccgtctccaggataaaaca 12797020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 25478393 - 25478297
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||| |||||||||||||||||||||| ||||| | |||| ||| || |||||||||| |||||| ||||||||||| |||||| ||||||||    
T  25478393 tgagtcacaaccaggtcgctctctttaagacgtttcgtgacactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccagaataaaaca 25478297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 25497421 - 25497325
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| |||||   |||| ||| || |||||||||  |||||| ||||||||||| |||||||||||||||    
T  25497421 tgagtcacgaccaggtcgctctctttaagacgtttcgtaacactgcccaaatttgtgcaagtcagactatcaaccacgccgcctccaggataaaaca 25497325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 31326738 - 31326834
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||  | |||| ||| || |||||||||| |||||| ||||||||||  |||||||||||||||    
T  31326738 tgagtcacgaccaggtcgctctctttaagacgtttcatgccactgcccaaaattgtgcaaggcagactatcaaccacgccacctccaggataaaaca 31326834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 295 - 401
Target Start/End: Complemental strand, 11658984 - 11658877
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactac-ccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaacagcc 393  Q
    ||||||| ||||| |||||| ||||||||||||||| ||||||||| | || ||||||||||||||||||||||  | ||| ||||| |||||||||| |    
T  11658984 tgagtcatgaccaagtcgctttctttaagacatttcacggcactactcgaatttgtgcaaggtagactaacaactgcaccgcctccatgataaaacagtc 11658885  T
Q  394 cagatcac 401  Q
    ||| ||||    
T  11658884 cagttcac 11658877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 295 - 386
Target Start/End: Complemental strand, 42926857 - 42926763
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagaca--tttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    |||||||||| |||| ||||||||||||||||  ||||| |||||| |||||  ||||||||||||||||| ||||||||||| |||||||||||    
T  42926857 tgagtcacgatcaggccgctctctttaagacacgtttcgtggcactgcccaaaattgtgcaaggtagactatcaaccacgccgcctccaggataa 42926763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 295 - 388
Target Start/End: Original strand, 29677380 - 29677474
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaa 388  Q
    |||||||||| || ||||||||||||||||| ||||| |||||| ||| || |||||||| | |||||| ||||||||||| |||||||||||||    
T  29677380 tgagtcacgatcatgtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaagcagactatcaaccacgccgcctccaggataaaa 29677474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 7737947 - 7737851
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||| ||||||||||||||||  ||| | |||||| |||||  |||||||||  |||||| ||||||||||| |||||||||||||||    
T  7737947 tgagtcacgaccatgtcgctctctttaagaagttttgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaaca 7737851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 19892562 - 19892466
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcact-acccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||  ||||||  || || ||||||||   |||||| ||||||||||| |||||||||||||||    
T  19892562 tgagtcacgaccaggtcgctctctttaagacgtttcctggcactgtccaaaattgtgcaacacagactatcaaccacgccgcctccaggataaaaca 19892466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 285 - 367
Target Start/End: Original strand, 28854994 - 28855077
Alignment:
Q  285 aataccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagtt-gtgcaaggtagactaacaac 367  Q
    ||||||||| |||||||| ||| ||||||| |||||||||| |||| |||||||| ||||||| || |||||||||||||||||    
T  28854994 aataccgggttgagtcacaacccggtcgctttctttaagacgtttcacggcactatccaagtttgtacaaggtagactaacaac 28855077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 19578510 - 19578414
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacc-caagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||||||| |||||||||||||||| ||| | |||||||||  || |||||||||| |||||| |||||| || | ||||||| |||||||    
T  19578510 tgagtcacgaccagatcgctctctttaagacgttttgtggcactacctaaaattgtgcaaggaagactatcaaccatgctgcctccagggtaaaaca 19578414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 299 - 390
Target Start/End: Original strand, 35601925 - 35602017
Alignment:
Q  299 tcacgaccaggtcgctctctttaagacatttcgcggcact-acccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||||||||||| |||||||| ||||| ||||||  || || |||||||||  ||| || ||||||||||| |||||||||||||||    
T  35601925 tcacgaccaggtcgctctttttaagacgtttcgtggcactgtccaaaattgtgcaagacagagtatcaaccacgccgcctccaggataaaaca 35602017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 280 - 422
Target Start/End: Original strand, 39542886 - 39543029
Alignment:
Q  280 aagaaaataccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggt-agactaacaaccacgccgtct 377  Q
    |||| ||||||||  |||||||||| |||||||||||||||||||| |||| |||||||||   || ||||| ||||| |||||||||||| |   | ||    
T  39542886 aagagaataccggtttgagtcacgatcaggtcgctctctttaagacgtttcacggcactacatgagtttgtgtaaggtaagactaacaaccgcattgcct 39542985  T
Q  378 ccaggataaaacagcccagatcactgttacgattatatactgcac 422  Q
    ||||||||||| ||||||| | |||||| ||||||  ||||||||    
T  39542986 ccaggataaaatagcccagtttactgtt-cgattacgtactgcac 39543029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 295 - 388
Target Start/End: Original strand, 29677766 - 29677860
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacc-caagttgtgcaaggtagactaacaaccacgccgtctccaggataaaa 388  Q
    ||||||||||||||||||||||| ||||||||||| | |||||| ||  || |||||||||| | |||| |||||| |||| || ||||||||||    
T  29677766 tgagtcacgaccaggtcgctctcattaagacatttagtggcactgccaaaaattgtgcaaggcaaactatcaaccaagccgcctacaggataaaa 29677860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 391
Target Start/End: Original strand, 160040 - 160137
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaacag 391  Q
    |||| ||||||||||||||||||||||| || |||| || |||||||| || ||||||||||||| ||| ||||| || || ||||  ||||||||||    
T  160040 tgagacacgaccaggtcgctctctttaatacgtttcacgacactacccaaaattgtgcaaggtaggctatcaaccgcgtcgcctccgagataaaacag 160137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 299 - 390
Target Start/End: Complemental strand, 35639089 - 35638997
Alignment:
Q  299 tcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||| ||||||||||| |||||||| ||||| |||||| ||| || |||||||||  ||  || ||||||||||| |||||||||||||||    
T  35639089 tcacgatcaggtcgctctttttaagacgtttcgtggcactgcccaaaattgtgcaagacagcgtatcaaccacgccgcctccaggataaaaca 35638997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 28945191 - 28945266
Alignment:
Q  318 tttaagacatttcgcggcactacccaagtt-gtgcaaggtagactaacaaccacgccgtctccaggataaaacagc 392  Q
    |||||||| |||||||||||||| | |||| |||||||||| |||||||||| ||  | |||||||||||||||||    
T  28945191 tttaagacgtttcgcggcactacacgagtttgtgcaaggtatactaacaaccgcgttgcctccaggataaaacagc 28945266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 287 - 390
Target Start/End: Complemental strand, 29907468 - 29907368
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| | |||||||||||||||| ||| |||||||| ||||||| |||||   || ||||| |||||   ||| |||| |||||| |||||||||||    
T  29907468 taccgggttaagtcacgaccaggtcgatctttttaagacgtttcgcgacactattaaaattgtgtaaggt---ctatcaactacgccgcctccaggataa 29907372  T
Q  387 aaca 390  Q
    ||||    
T  29907371 aaca 29907368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 374
Target Start/End: Complemental strand, 21523815 - 21523736
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccg 374  Q
    |||||||||||||||| ||| ||||||| || ||||| |||||| |||||  |||||||||| |||||| |||||||||||    
T  21523815 tgagtcacgaccaggttgctatctttaa-acgtttcgtggcactgcccaaaattgtgcaagggagactatcaaccacgccg 21523736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 40847691 - 40847595
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaa-gttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||| |||| |||||||||||| ||| | ||||||   ||| ||||||||||| | |||| ||||||||||  |||| ||||||||||    
T  40847691 tgagtcacgaccatgtcgttctctttaagacgttttgtggcactgttcaaagttgtgcaaggcaaactatcaaccacgccacctcctggataaaaca 40847595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 28603297 - 28603375
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcact-acccaagttgtgcaaggtagactaacaaccacgc 372  Q
    |||||||||||||||||||||||||||| || ||||| | ||||  || || |||||||||  |||||| |||||||||    
T  28603297 tgagtcacgaccaggtcgctctctttaaaacgtttcgtgacactgtccaaaattgtgcaagacagactatcaaccacgc 28603375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 22844818 - 22844862
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcacta 339  Q
    ||||||||||||| |||||| ||||||||||||||| || |||||    
T  22844818 tgagtcacgaccatgtcgctttctttaagacatttcacgccacta 22844862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 30631578 - 30631674
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||  ||||| |||||||||| || ||||| |||| | || ||  |||||||||  |||||| ||||||||||  |||||||||||||||    
T  30631578 tgagtcacgattaggtcactctctttaaaacttttcgtggcattgccaaaaattgtgcaagaaagactatcaaccacgccacctccaggataaaaca 30631674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 120; Significance: 4e-61; HSPs: 4)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 277 - 436
Target Start/End: Complemental strand, 2885 - 2726
Alignment:
Q  277 caaaagaaaataccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtc 376  Q
    |||||| || ||||||| ||||||||||||||||||| ||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  2885 caaaaggaattaccgggttgagtcacgaccaggtcgcgctctttaagacgtttcgtgacactacccaagttgtgcaaggtagactaacaaccacgccgtc 2786  T
Q  377 tccaggataaaacagcccagatcactgttacgattatatactgcacagtatacaaccgct 436  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||    
T  2785 tccaggataaaacagcccagaccactgttacgattatacactgcacagtatacaatcgct 2726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 277 - 436
Target Start/End: Complemental strand, 10845 - 10686
Alignment:
Q  277 caaaagaaaataccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtc 376  Q
    |||||| || ||||||| ||||||||||||||||||| ||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  10845 caaaaggaattaccgggttgagtcacgaccaggtcgcgctctttaagacgtttcgtgacactacccaagttgtgcaaggtagactaacaaccacgccgtc 10746  T
Q  377 tccaggataaaacagcccagatcactgttacgattatatactgcacagtatacaaccgct 436  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||    
T  10745 tccaggataaaacagcccagaccactgttacgattatacactgcacagtatacaatcgct 10686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 378 - 436
Target Start/End: Complemental strand, 2685 - 2627
Alignment:
Q  378 ccaggataaaacagcccagatcactgttacgattatatactgcacagtatacaaccgct 436  Q
    |||||||||||||||||||| |||||| ||||||||| |||||||||||||||| ||||    
T  2685 ccaggataaaacagcccagaccactgtgacgattatacactgcacagtatacaatcgct 2627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 378 - 436
Target Start/End: Complemental strand, 10645 - 10587
Alignment:
Q  378 ccaggataaaacagcccagatcactgttacgattatatactgcacagtatacaaccgct 436  Q
    |||||||||||||||||||| |||||| ||||||||| |||||||||||||||| ||||    
T  10645 ccaggataaaacagcccagaccactgtgacgattatacactgcacagtatacaatcgct 10587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 88; Significance: 5e-42; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 13843 - 13732
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||    
T  13843 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataa 13744  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  13743 aacagcccagat 13732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 295 - 398
Target Start/End: Complemental strand, 19293 - 19187
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaacc---acgccgtctccaggataaaacag 391  Q
    ||||||||||||| |||||| |||||||||| ||||||||||||||| |||||||||||||||||||| |||||    ||||||||||||||||||||||    
T  19293 tgagtcacgaccatgtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcggcgccgtctccaggataaaacag 19194  T
Q  392 cccagat 398  Q
    |||||||    
T  19193 cccagat 19187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 88; Significance: 5e-42; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 3050 - 3161
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||  | ||||||||||||||||| ||||| |||||||||||||||||    
T  3050 taccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataa 3149  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  3150 aacagcccagat 3161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 88; Significance: 5e-42; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 81485 - 81374
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||  | ||||||||||||||||| ||||| |||||||||||||||||    
T  81485 taccgggatgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataa 81386  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  81385 aacagcccagat 81374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 88; Significance: 5e-42; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 31537 - 31648
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||    
T  31537 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtctccaggataa 31636  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  31637 aacagcccagat 31648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 287 - 395
Target Start/End: Original strand, 26365 - 26473
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||||||||| |||| || ||||||||||||||||| |||||||||||||||  | ||||||||||||||||| ||||| |||||||||||||||||    
T  26365 taccgggatgagttacgatcaagtcgctctctttaagacgtttcgcggcactacctgaattgtgcaaggtagactagcaaccgcgccgtctccaggataa 26464  T
Q  387 aacagccca 395  Q
    |||||||||    
T  26465 aacagccca 26473  T

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Target: scaffold0594 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 287 - 398
Target Start/End: Complemental strand, 9311 - 9200
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||| |||||| ||||| |||||||||||||||||    
T  9311 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggaagactagcaaccgcgccgtctccaggataa 9212  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  9211 aacagcccagat 9200  T

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Target: scaffold0517 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 287 - 398
Target Start/End: Original strand, 3555 - 3666
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataa 386  Q
    ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||| ||||| |||||| ||||||||||    
T  3555 taccggggtgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaagttgtgcaaggtagactagcaaccgcgccgtttccaggataa 3654  T
Q  387 aacagcccagat 398  Q
    ||||||||||||    
T  3655 aacagcccagat 3666  T

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Target: scaffold0060 (Bit Score: 80; Significance: 3e-37; HSPs: 3)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 295 - 398
Target Start/End: Original strand, 37010 - 37113
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaacagccc 394  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||| || ||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  37010 tgagtcacgaccaggtcgctttctttaagacgtttcgcggcactacctaaattgtgcaaggtagactagcaaccgcgccgtctccaggataaaacagccc 37109  T
Q  395 agat 398  Q
    ||||    
T  37110 agat 37113  T

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Target: scaffold0060; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 287 - 428
Target Start/End: Complemental strand, 47960 - 47819
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggata 385  Q
    ||||||| |||||||||||||||||||| ||| |||||||  ||  |||||||||| || |||||||||||||||||||||||  |  | ||| ||||||    
T  47960 taccgggttgagtcacgaccaggtcgctttctataagacaaatcagggcactacccaaaattgtgcaaggtagactaacaaccgtg-tgcctcaaggata 47862  T
Q  386 aaacagcccagatc-actgttacgattatatactgcacagtata 428  Q
    ||||||||||| ||  ||||| |||||| ||||||||| |||||    
T  47861 aaacagcccagttcgcctgtt-cgattaaatactgcaccgtata 47819  T

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Target: scaffold0060; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 295 - 428
Target Start/End: Complemental strand, 52995 - 52862
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaacagcc 393  Q
    ||||||||||  |||||||| |||||||||||  || || |||||||| || || ||||||||||||||||||||  |  | ||||||||||||||||||    
T  52995 tgagtcacgattaggtcgctttctttaagacaaatcacgacactacccaaaattatgcaaggtagactaacaaccgtg-tgcctccaggataaaacagcc 52897  T
Q  394 cagatc-actgttacgattatatactgcacagtata 428  Q
    ||| ||  ||||| |||||| ||||||||| |||||    
T  52896 cagttcgtctgtt-cgattaaatactgcaccgtata 52862  T

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Target: scaffold0002 (Bit Score: 65; Significance: 3e-28; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 4073 - 4169
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||| || |||||||||| |||||| ||||||||||| |||||||||||||||    
T  4073 tgagtcacgaccaggtcgctctctttaagacatttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 4169  T

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Target: scaffold0002; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 390
Target Start/End: Complemental strand, 444007 - 443945
Alignment:
Q  327 tttcgcggcactacccaagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||| |||||| || || |||||||||| |||||| |||||||||||||| ||||||||||||    
T  444007 tttcgtggcactgccaaaattgtgcaaggcagactatcaaccacgccgtct-caggataaaaca 443945  T

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Target: scaffold0352 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 7103 - 7199
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| ||| || |||||||||| |||||| ||||||||||| |||||||||||||||    
T  7103 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 7199  T

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Target: scaffold0182 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 9983 - 9887
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| ||| || |||||||||| |||||| ||||||||||| |||||||||||||||    
T  9983 tgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 9887  T

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Target: scaffold0067 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 290 - 402
Target Start/End: Complemental strand, 34069 - 33956
Alignment:
Q  290 cgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaa 388  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||| ||||||||| |||||||| | ||  || ||||||||||    
T  34069 cgggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccaaagtttgtacaaggtagaataacaaccgctcctccttcaggataaaa 33970  T
Q  389 cagcccagatcact 402  Q
    || || ||||||||    
T  33969 caacctagatcact 33956  T

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Target: scaffold0020 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 295 - 428
Target Start/End: Complemental strand, 1321 - 1188
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaacagcc 393  Q
    |||||||||||||||||||| |||||||||||  || ||||||||||| || |||||||||||||||||||||||  |  | ||||| ||||||||||||    
T  1321 tgagtcacgaccaggtcgctttctttaagacaaatcacggcactacccgaaattgtgcaaggtagactaacaaccgtg-tgcctccaagataaaacagcc 1223  T
Q  394 cagatca-ctgttacgattatatactgcacagtata 428  Q
    ||| ||| ||||| |||||| ||||||||| |||||    
T  1222 cagttcacctgtt-cgattaaatactgcaccgtata 1188  T

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Target: scaffold0045 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 295 - 390
Target Start/End: Original strand, 83065 - 83161
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||||||||||||||||||||||||||| ||||| | ||| |||| || || ||||||| |||||| |||||| |||| |||||||||||||||    
T  83065 tgagtcacgaccaggtcgctctctttaagacgtttcgtgacaccacccaaaattatgcaaggcagactatcaaccatgccgcctccaggataaaaca 83161  T

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Target: scaffold0061 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 287 - 401
Target Start/End: Original strand, 45776 - 45890
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggata 385  Q
    ||||||| |||||||| ||||||||||| ||||||| |||  || ||||||||||| || |||||||||||||||||||||||  |  | ||||||||||    
T  45776 taccgggttgagtcacaaccaggtcgctttctttaaaacaaatcacggcactacccgaaattgtgcaaggtagactaacaaccgtg-tgcctccaggata 45874  T
Q  386 aaacagcccagatcac 401  Q
    ||||||||||| ||||    
T  45875 aaacagcccagttcac 45890  T

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Target: scaffold0017 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 287 - 401
Target Start/End: Complemental strand, 153011 - 152897
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggata 385  Q
    ||||||| |||||||| ||||||||||| ||||||| |||  || ||||||||||| || |||||||||||||||||||||||  |  | ||||||||||    
T  153011 taccgggttgagtcacaaccaggtcgctttctttaaaacaaatcacggcactacccgaaattgtgcaaggtagactaacaaccgtg-tgcctccaggata 152913  T
Q  386 aaacagcccagatcac 401  Q
    ||||||||||| ||||    
T  152912 aaacagcccagttcac 152897  T

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Target: scaffold0012 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 295 - 390
Target Start/End: Complemental strand, 166182 - 166086
Alignment:
Q  295 tgagtcacgaccaggtcgctctctttaagacatttcgcggcactacc-caagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||| |||||||||||||||||||||| ||||| |||||| ||  || |||||||||  | |||| ||||||||||| |||||||||||||||    
T  166182 tgagtcacaaccaggtcgctctctttaagacgtttcgtggcactgccaaaaattgtgcaagacatactatcaaccacgccgcctccaggataaaaca 166086  T

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Target: scaffold0057 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 301 - 390
Target Start/End: Original strand, 35639 - 35729
Alignment:
Q  301 acgaccaggtcgctctctttaagacatttcgcggcactacccaag-ttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    ||||||| | ||||||||||||||| ||||| | ||||  ||||  |||||||||| |||||| ||||||||||| |||||||||||||||    
T  35639 acgaccatgccgctctctttaagacgtttcgtgacactggccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaaca 35729  T

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Target: scaffold0008 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 300 - 390
Target Start/End: Original strand, 255821 - 255912
Alignment:
Q  300 cacgaccaggtcgctctctttaagacatttcgcggcactaccc-aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 390  Q
    |||||||||||| ||||||||||||  ||||| |||||||||| || |||||||||  | |||| |||| | |||| |||||||||||||||    
T  255821 cacgaccaggtcactctctttaagaggtttcgtggcactacccaaaattgtgcaagacatactatcaactatgccgcctccaggataaaaca 255912  T

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Target: scaffold0041 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 369
Target Start/End: Complemental strand, 35758 - 35676
Alignment:
Q  287 taccgggatgagtcacgaccaggtcgctctctttaagacatttcgcggcactacccaagttgtgcaaggtagactaacaacca 369  Q
    ||||||| |||||||||| |||| |||| |||||||||||  |  | |||||| | || ||||||||||||||||||||||||    
T  35758 taccgggttgagtcacgatcagggcgctttctttaagacaaatgacagcactatcgaaattgtgcaaggtagactaacaacca 35676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 395
Target Start/End: Complemental strand, 171798 - 171711
Alignment:
Q  307 aggtcgctctctttaagacatttcgcggcactacc-caagttgtgcaaggtagactaacaaccacgccgtctccaggataaaacagccca 395  Q
    ||||||||||||||||||| ||||| |||||| ||  || |||||||| | |||||| |||||||| |||| | ||||||||||||||||    
T  171798 aggtcgctctctttaagacgtttcgtggcactgcctaaaattgtgcaa-gcagactatcaaccacgacgtc-ctaggataaaacagccca 171711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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