View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8157_low_10 (Length: 403)

Name: NF8157_low_10
Description: NF8157
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8157_low_10
NF8157_low_10
[»] chr5 (19 HSPs)
chr5 (131-385)||(9184234-9184487)
chr5 (132-268)||(4047440-4047578)
chr5 (119-268)||(2795536-2795689)
chr5 (119-262)||(30328345-30328492)
chr5 (131-268)||(34578038-34578177)
chr5 (119-268)||(12642005-12642158)
chr5 (131-267)||(28629905-28630043)
chr5 (119-263)||(15190885-15191034)
chr5 (119-251)||(11375972-11376107)
chr5 (157-268)||(31365962-31366075)
chr5 (154-268)||(41350252-41350368)
chr5 (178-252)||(14466524-14466598)
chr5 (119-268)||(8103592-8103745)
chr5 (119-268)||(11636744-11636897)
chr5 (129-252)||(24329665-24329789)
chr5 (142-266)||(16174636-16174762)
chr5 (132-204)||(29538755-29538827)
chr5 (131-209)||(5958196-5958275)
chr5 (132-268)||(6863584-6863722)
[»] chr2 (27 HSPs)
chr2 (119-268)||(16126571-16126724)
chr2 (119-268)||(12016679-12016832)
chr2 (119-268)||(27665056-27665209)
chr2 (119-268)||(19228438-19228591)
chr2 (119-252)||(39904078-39904213)
chr2 (119-268)||(16919166-16919319)
chr2 (119-268)||(22705467-22705620)
chr2 (120-268)||(14377438-14377590)
chr2 (158-268)||(4821330-4821442)
chr2 (119-237)||(10690795-10690915)
chr2 (119-265)||(13351226-13351377)
chr2 (138-268)||(2060054-2060187)
chr2 (118-268)||(16123290-16123444)
chr2 (119-252)||(26229884-26230018)
chr2 (135-268)||(8770898-8771032)
chr2 (119-268)||(15411634-15411788)
chr2 (19-109)||(5583046-5583130)
chr2 (119-208)||(12438723-12438813)
chr2 (132-268)||(45062225-45062364)
chr2 (119-268)||(12919362-12919517)
chr2 (157-268)||(15231883-15231997)
chr2 (135-263)||(41492150-41492279)
chr2 (187-268)||(9747400-9747483)
chr2 (131-210)||(22162149-22162228)
chr2 (131-202)||(25998082-25998154)
chr2 (157-263)||(37471757-37471866)
chr2 (119-190)||(43388859-43388932)
[»] chr1 (26 HSPs)
chr1 (119-268)||(313762-313915)
chr1 (119-268)||(17919466-17919619)
chr1 (119-268)||(39150339-39150492)
chr1 (158-268)||(6569997-6570109)
chr1 (119-268)||(8062217-8062370)
chr1 (119-268)||(44918037-44918190)
chr1 (154-268)||(30288876-30288992)
chr1 (142-268)||(39930813-39930941)
chr1 (119-268)||(6754484-6754637)
chr1 (119-247)||(32716198-32716328)
chr1 (131-268)||(30171905-30172045)
chr1 (131-268)||(30187446-30187586)
chr1 (131-268)||(30363007-30363147)
chr1 (154-261)||(52833491-52833600)
chr1 (119-268)||(41624842-41624995)
chr1 (187-268)||(3096292-3096375)
chr1 (129-252)||(21854147-21854271)
chr1 (197-252)||(10896446-10896501)
chr1 (200-263)||(44007547-44007612)
chr1 (119-182)||(51382384-51382449)
chr1 (158-253)||(31100962-31101058)
chr1 (131-265)||(36490805-36490942)
chr1 (187-252)||(21391929-21391994)
chr1 (131-268)||(34801994-34802133)
chr1 (157-210)||(43671742-43671795)
chr1 (187-268)||(43909276-43909357)
[»] chr8 (32 HSPs)
chr8 (119-268)||(10129116-10129269)
chr8 (119-268)||(7140471-7140624)
chr8 (119-247)||(9743874-9744004)
chr8 (119-268)||(13327953-13328106)
chr8 (119-276)||(40210825-40210986)
chr8 (119-268)||(39701815-39701968)
chr8 (145-268)||(18567428-18567553)
chr8 (119-268)||(9801681-9801834)
chr8 (131-262)||(8140594-8140727)
chr8 (119-268)||(19343848-19344002)
chr8 (119-247)||(38527833-38527967)
chr8 (186-264)||(45519578-45519658)
chr8 (119-268)||(35678287-35678440)
chr8 (119-268)||(26682080-26682234)
chr8 (137-268)||(39024869-39025002)
chr8 (119-268)||(14816138-14816291)
chr8 (119-268)||(14829449-14829602)
chr8 (158-268)||(1203655-1203767)
chr8 (131-268)||(4084555-4084694)
chr8 (119-212)||(39703466-39703561)
chr8 (131-268)||(4080406-4080545)
chr8 (131-268)||(4102862-4103001)
chr8 (131-268)||(31812139-31812279)
chr8 (200-252)||(31451420-31451472)
chr8 (131-268)||(8284580-8284721)
chr8 (132-244)||(44091346-44091458)
chr8 (144-268)||(26834600-26834727)
chr8 (132-212)||(45516316-45516395)
chr8 (131-225)||(34249703-34249799)
chr8 (157-268)||(7393257-7393370)
chr8 (135-210)||(32195888-32195961)
chr8 (119-189)||(35745982-35746054)
[»] chr7 (26 HSPs)
chr7 (119-268)||(19889353-19889506)
chr7 (119-268)||(39757122-39757275)
chr7 (119-268)||(5909294-5909447)
chr7 (142-266)||(384444-384570)
chr7 (119-268)||(3561890-3562043)
chr7 (119-268)||(9331974-9332127)
chr7 (119-247)||(47120229-47120359)
chr7 (119-268)||(36548472-36548625)
chr7 (131-268)||(23982767-23982907)
chr7 (131-268)||(12085943-12086082)
chr7 (154-268)||(18102242-18102359)
chr7 (119-268)||(7170015-7170168)
chr7 (119-208)||(24250326-24250417)
chr7 (119-268)||(47457473-47457627)
chr7 (176-252)||(8170593-8170669)
chr7 (187-268)||(41331468-41331551)
chr7 (131-268)||(25709411-25709551)
chr7 (119-225)||(19868126-19868235)
chr7 (131-268)||(24462967-24463106)
chr7 (187-268)||(5833438-5833521)
chr7 (158-209)||(24699188-24699240)
chr7 (121-209)||(39869137-39869228)
chr7 (204-268)||(8594998-8595063)
chr7 (208-247)||(24250602-24250641)
chr7 (154-268)||(7899498-7899615)
chr7 (119-190)||(12650833-12650906)
[»] chr3 (21 HSPs)
chr3 (119-268)||(11610927-11611080)
chr3 (132-268)||(16875037-16875175)
chr3 (119-268)||(3863342-3863495)
chr3 (119-268)||(20938069-20938223)
chr3 (131-247)||(50364217-50364333)
chr3 (119-249)||(54621251-54621383)
chr3 (119-214)||(51339252-51339349)
chr3 (131-268)||(13495320-13495460)
chr3 (158-268)||(29686374-29686486)
chr3 (131-268)||(40497074-40497213)
chr3 (131-252)||(32553393-32553514)
chr3 (131-268)||(38389473-38389613)
chr3 (158-252)||(24978700-24978794)
chr3 (119-268)||(46492355-46492509)
chr3 (188-268)||(23523030-23523112)
chr3 (218-268)||(11611090-11611142)
chr3 (187-252)||(36426439-36426504)
chr3 (136-195)||(30214098-30214156)
chr3 (205-268)||(41151734-41151799)
chr3 (119-190)||(46845533-46845606)
chr3 (131-248)||(53794790-53794908)
[»] scaffold0061 (1 HSPs)
scaffold0061 (119-268)||(52791-52944)
[»] scaffold0017 (1 HSPs)
scaffold0017 (119-268)||(145690-145843)
[»] scaffold0011 (1 HSPs)
scaffold0011 (119-268)||(13098-13251)
[»] chr6 (19 HSPs)
chr6 (119-247)||(5362928-5363058)
chr6 (131-252)||(22974603-22974724)
chr6 (131-252)||(23813677-23813798)
chr6 (131-264)||(2830697-2830832)
chr6 (131-268)||(31069594-31069733)
chr6 (131-268)||(31169775-31169915)
chr6 (158-268)||(31568163-31568275)
chr6 (131-268)||(10887055-10887195)
chr6 (131-268)||(6016882-6017022)
chr6 (142-252)||(1017808-1017919)
chr6 (131-207)||(3850578-3850654)
chr6 (131-268)||(18332700-18332840)
chr6 (168-268)||(17596404-17596507)
chr6 (158-202)||(32615540-32615584)
chr6 (196-268)||(31503834-31503908)
chr6 (119-190)||(26602523-26602596)
chr6 (119-210)||(8977538-8977632)
chr6 (165-214)||(34300422-34300472)
chr6 (219-268)||(3853058-3853109)
[»] chr4 (24 HSPs)
chr4 (119-268)||(29190828-29190981)
chr4 (120-247)||(7349702-7349831)
chr4 (119-268)||(23553582-23553736)
chr4 (121-268)||(35999959-36000103)
chr4 (136-268)||(41415569-41415703)
chr4 (145-268)||(4329635-4329760)
chr4 (137-266)||(48910816-48910947)
chr4 (132-268)||(53961350-53961488)
chr4 (142-268)||(10389280-10389408)
chr4 (121-247)||(10813529-10813658)
chr4 (131-268)||(16667396-16667536)
chr4 (131-268)||(47326904-47327044)
chr4 (131-268)||(47341700-47341840)
chr4 (174-268)||(23051394-23051490)
chr4 (131-268)||(54495649-54495789)
chr4 (119-205)||(49228369-49228457)
chr4 (144-268)||(27362430-27362557)
chr4 (154-247)||(39539513-39539607)
chr4 (118-213)||(49650222-49650319)
chr4 (119-224)||(2096883-2096991)
chr4 (131-268)||(8736823-8736962)
chr4 (204-268)||(49228754-49228820)
chr4 (119-268)||(49181084-49181238)
chr4 (157-244)||(36971326-36971414)
[»] scaffold0155 (1 HSPs)
scaffold0155 (131-268)||(3425-3565)
[»] scaffold0727 (1 HSPs)
scaffold0727 (119-268)||(5703-5857)
[»] scaffold0009 (2 HSPs)
scaffold0009 (122-244)||(43479-43602)
scaffold0009 (135-210)||(191386-191461)
[»] scaffold0018 (1 HSPs)
scaffold0018 (154-252)||(182093-182190)
[»] scaffold0111 (1 HSPs)
scaffold0111 (131-268)||(37126-37266)
[»] scaffold0618 (1 HSPs)
scaffold0618 (132-244)||(8452-8564)
[»] scaffold0036 (1 HSPs)
scaffold0036 (131-268)||(94030-94170)


Alignment Details
Target: chr5 (Bit Score: 169; Significance: 2e-90; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 131 - 385
Target Start/End: Original strand, 9184234 - 9184487
Alignment:
Q  131 catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaa 230  Q
    |||||||||| ||||||||||  ||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  9184234 catgttaaggtaactaaaagtagtaacttttcattgaaaaccaataattattgattaaaaactacatatttaatataaaaaacacaagttccaagttaaa 9184333  T
Q  231 gttactactttaaactttttaatgtgcaaatttgcacagaaaaacctttcacttaattt-----tattgtgagaatttaatacaaataacaatttagttt 325  Q
    ||||||||||||||||| ||||  ||      |||| ||||||||| ||||||||||||     ||||||||||||||||||||||||||||||||||||    
T  9184334 gttactactttaaacttcttaacatg------tgcatagaaaaacccttcacttaatttcagtttattgtgagaatttaatacaaataacaatttagttt 9184427  T
Q  326 tctttgatgactttcaccataaaaatttgtcattactctgattgaaataaattctgttca 385  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9184428 tctttgatgactttcaccataaaaatttgtcattactctgattgaaataaattctgttca 9184487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 132 - 268
Target Start/End: Original strand, 4047440 - 4047578
Alignment:
Q  132 atgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaag 231  Q
    ||||||||| ||||||||||  ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  4047440 atgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattgttgattaaaagctacatatttaatataaaaaacacaagttccaagttaaag 4047539  T
Q  232 ttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    |||||||||||||||| |||  |||||||||||||||||    
T  4047540 ttactactttaaacttcttaacatgtgcaaatttgcaca 4047578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 119 - 268
Target Start/End: Original strand, 2795536 - 2795689
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacata 216  Q
    ||||||||||||||  |||||||| ||||||||||  ||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |    
T  2795536 tgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaaagttacatatttaatacaaaaaacaca 2795635  T
Q  217 agttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    |||||||||| |||||||||||||||||||| |||  |||||||||||||||||    
T  2795636 agttccaagtcaaagttactactttaaacttcttaacatgtgcaaatttgcaca 2795689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 119 - 262
Target Start/End: Complemental strand, 30328492 - 30328345
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacata 216  Q
    ||||||||||||||  |||||||  ||||||||||  | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |    
T  30328492 tgtgcaatattgcacatgttaagataactaaaagtagtcatttttcattaaaaaccaacaattattgattaaaagctacatatttaatataaaaaacaca 30328393  T
Q  217 agttccaagttaaagttactactttaaacttttta--atgtgcaaatt 262  Q
    ||||||||||||||||||||||||||||||| |||  |||||||||||    
T  30328392 agttccaagttaaagttactactttaaacttcttaacatgtgcaaatt 30328345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 131 - 268
Target Start/End: Original strand, 34578038 - 34578177
Alignment:
Q  131 catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaa 230  Q
    |||||||||| |||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| | |||||  ||||||||    
T  34578038 catgttaaggtaactaaaagtaataatttttcattgaaaatcaacaattgttgattaaaagctacatatttaatataaaaaatacaagttttaagttaaa 34578137  T
Q  231 gttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    ||||||| |||||||||||||  |||||||||||||||||    
T  34578138 gttactattttaaactttttaacatgtgcaaatttgcaca 34578177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 119 - 268
Target Start/End: Complemental strand, 12642158 - 12642005
Alignment:
Q  119 tgtgcaatattg--catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacata 216  Q
    ||||||||||||  |||||||||||||||||||||  |||||||||||||||||||||||||||| | ||||| | |||||||||||||||||||||| |    
T  12642158 tgtgcaatattgtacatgttaaggcaactaaaagtagtaatttttcattgaaaaccaacaattatcgtttaaatgttacatatttaatataaaaaacaca 12642059  T
Q  217 agttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    |||||||| | ||||||| || ||||||||| |||  |||||||||||||||||    
T  12642058 agttccaaatcaaagttattaatttaaacttcttaacatgtgcaaatttgcaca 12642005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 131 - 267
Target Start/End: Original strand, 28629905 - 28630043
Alignment:
Q  131 catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaa 230  Q
    |||||||| |||||||||| | |||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||  |||||||||    
T  28629905 catgttaaagcaactaaaaataataacttttcattgaaaaccaacaattatttattaaaagttacatatttaatataaaaaacacaagtctcaagttaaa 28630004  T
Q  231 gttactactttaaacttttta--atgtgcaaatttgcac 267  Q
    | || |||||||||||| |||  ||||||||||||||||    
T  28630005 gatattactttaaacttcttatcatgtgcaaatttgcac 28630043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 119 - 263
Target Start/End: Original strand, 15190885 - 15191034
Alignment:
Q  119 tgtgcaatattgcat--gttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatat-aaaaaacat 215  Q
    |||||||||||||||  ||||||| || |||||||  |||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||     
T  15190885 tgtgcaatattgcatatgttaaggtaagtaaaagtagtaatttttcattgaaaacaaacaattattgattaaaagttacatatttaatataaaaaaacac 15190984  T
Q  216 aagttccaagttaaagttactactttaaacttttta--atgtgcaaattt 263  Q
    ||||| ||||| ||| |||||||||||||||| |||  ||||||||||||    
T  15190985 aagtttcaagtcaaaattactactttaaacttcttaacatgtgcaaattt 15191034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 119 - 251
Target Start/End: Original strand, 11375972 - 11376107
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaaca-t 215  Q
    ||||||||||||||  |||||| ||||||||||||  ||| ||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||      
T  11375972 tgtgcaatattgcacatgttaaagcaactaaaagtagtaacttttcattgaaaatcaataattatttattaaaagctacatatttaatataaaaaacaca 11376071  T
Q  216 aagttccaagttaaagttactactttaaacttttta 251  Q
    || || ||||| ||||||||||||||||||||||||    
T  11376072 aaatttcaagtcaaagttactactttaaacttttta 11376107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 157 - 268
Target Start/End: Complemental strand, 31366075 - 31365962
Alignment:
Q  157 tttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaagttactactttaaacttttta--atg 254  Q
    ||||| ||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||| |||||||||| ||||||||| |||  |||    
T  31366075 ttttttattgaaaaccaacaattattgattaaatgttacatatttaatataaaaaacacaagttccaagtcaaagttactaatttaaacttcttaacatg 31365976  T
Q  255 tgcaaatttgcaca 268  Q
    | ||||||||||||    
T  31365975 tacaaatttgcaca 31365962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 154 - 268
Target Start/End: Original strand, 41350252 - 41350368
Alignment:
Q  154 taatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaagttactactttaaacttttta-- 251  Q
    ||||||| || |||||| ||||||||||| |||||||| ||||||||||||||||||| || ||||||||||| ||| |||||||||||||||| |||      
T  41350252 taattttgcactgaaaatcaacaattatttattaaaagttacatatttaatataaaaagcacaagttccaagtcaaaattactactttaaacttcttaac 41350351  T
Q  252 atgtgcaaatttgcaca 268  Q
    |||||||||||||||||    
T  41350352 atgtgcaaatttgcaca 41350368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 178 - 252
Target Start/End: Complemental strand, 14466598 - 14466524
Alignment:
Q  178 ttattgattaaaagctacatatttaatataaaaaacataagttccaagttaaagttactactttaaactttttaa 252  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||    
T  14466598 ttattgattaaaagctacatatttaatataaaaaacacaagtttcaagttaaagttactactttaaacttcttaa 14466524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 119 - 268
Target Start/End: Complemental strand, 8103745 - 8103592
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaag-ctacatatttaatataaaaaacat 215  Q
    ||||||||||||||  ||||||||||||||||| |  ||| |||| ||||||| |||||||||| | |||||||  ||||||| |||||||||||  ||     
T  8103745 tgtgcaatattgcacatgttaaggcaactaaaaatagtaactttttattgaaa-ccaacaattaattattaaaaatctacataattaatataaaatgcac 8103647  T
Q  216 aagttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    ||||||||||| |||||||||||||||||||| |||  |||||||||||||||||    
T  8103646 aagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcaca 8103592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 119 - 268
Target Start/End: Original strand, 11636744 - 11636897
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgatt-aaaagctacatatttaatataaaaaacat 215  Q
    ||||||||||||||  |||||| | ||||||||||  ||| ||||||||||||||||||||||| | ||| ||||  |||||||||||||| |||  ||     
T  11636744 tgtgcaatattgcacatgttaaagaaactaaaagtagtaacttttcattgaaaaccaacaattaattattaaaaatttacatatttaatat-aaatgcac 11636842  T
Q  216 aagttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    ||||| ||||| |||||||||||||||||||| |||  |||||||||||||||||    
T  11636843 aagtttcaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcaca 11636897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 129 - 252
Target Start/End: Complemental strand, 24329789 - 24329665
Alignment:
Q  129 tgcatgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgatt-aaaagctacatatttaatataaaaaacataagttccaagtt 227  Q
    |||||||||||  | ||||||||  |||||||| |||||||| ||||| ||||| ||| ||||| ||| ||||||||||||||   | |||||||||||     
T  24329789 tgcatgttaagatatctaaaagtagtaatttttaattgaaaaacaacatttatttatttaaaagatacctatttaatataaaatgtacaagttccaagtc 24329690  T
Q  228 aaagttactactttaaactttttaa 252  Q
    |||||||| ||||||||||||||||    
T  24329689 aaagttaccactttaaactttttaa 24329665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 142 - 266
Target Start/End: Complemental strand, 16174762 - 16174636
Alignment:
Q  142 aactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagc-tacatatttaatataaaaaacataagttccaagttaaagttactactt 240  Q
    ||||||||||  ||| ||||||||||||||||||||||| | ||||||| | |||||||||||||| |||  || ||||| ||| | |||||||||||||    
T  16174762 aactaaaagtagtaacttttcattgaaaaccaacaattaattattaaaaacttacatatttaatat-aaatgcacaagtttcaattcaaagttactactt 16174664  T
Q  241 taaacttttta--atgtgcaaatttgca 266  Q
    |||| || |||  |||||||||||||||    
T  16174663 taaatttcttatgatgtgcaaatttgca 16174636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 132 - 204
Target Start/End: Original strand, 29538755 - 29538827
Alignment:
Q  132 atgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaat 204  Q
    ||||||| |||| ||||||   ||| |||||||| |||||||||||||||| ||||||||||| |||||||||    
T  29538755 atgttaatgcaattaaaagaagtaacttttcattaaaaaccaacaattatttattaaaagctatatatttaat 29538827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 5958275 - 5958196
Alignment:
Q  131 catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgatt-aaaagctacatatttaatataaa 209  Q
    |||||||| | ||||||||||  ||||||||||||||||| ||||||||| | ||| ||||  |||||||||||||||||    
T  5958275 catgttaaagaaactaaaagtagtaatttttcattgaaaatcaacaattaattattaaaaatttacatatttaatataaa 5958196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 268
Target Start/End: Original strand, 6863584 - 6863722
Alignment:
Q  132 atgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaa-gctacatatttaatataaaaaacataagttccaagttaaa 230  Q
    ||||||||| ||||||||||   || |||| ||||||| |||||||||||| | ||||| | || |||||||||| ||||     |||||||||  ||||    
T  6863584 atgttaaggtaactaaaagtagcaagtttttattgaaa-ccaacaattatttaataaaaagttatatatttaatacaaaatgttcaagttccaatataaa 6863682  T
Q  231 gttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    ||||||| |||||| ||||||  |||||||||||||||||    
T  6863683 gttactattttaaattttttaacatgtgcaaatttgcaca 6863722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 108; Significance: 4e-54; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 119 - 268
Target Start/End: Complemental strand, 16126724 - 16126571
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacata 216  Q
    ||||||||||||||  |||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  16126724 tgtgcaatattgcacatgttaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacaca 16126625  T
Q  217 agttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    |||| |||||||||||||||||||||||||| |||  |||||||||||||||||    
T  16126624 agtttcaagttaaagttactactttaaacttcttaacatgtgcaaatttgcaca 16126571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 119 - 268
Target Start/End: Original strand, 12016679 - 12016832
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacata 216  Q
    ||||||||||||||  |||||||| ||||||||||  ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  12016679 tgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacaca 12016778  T
Q  217 agttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    |||||||||||||| |||||||||||||||| |||  |||||||||||||||||    
T  12016779 agttccaagttaaaattactactttaaacttcttaatatgtgcaaatttgcaca 12016832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 119 - 268
Target Start/End: Complemental strand, 27665209 - 27665056
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacata 216  Q
    ||||||||||||||  |||||||||||||||||||  ||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |    
T  27665209 tgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttattaaaagttacatatttaatataaaaaacaca 27665110  T
Q  217 agttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    |||||||||| |||||||||||||||||||| |||  |||||||||||||||||    
T  27665109 agttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcaca 27665056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 119 - 268
Target Start/End: Original strand, 19228438 - 19228591
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacata 216  Q
    ||||||||||||||  |||||||| ||||||||||  ||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |    
T  19228438 tgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaaagttacatatttaatacaaaaaacaca 19228537  T
Q  217 agttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    |||||||||| |||||||||||||||||||| |||  |||||||||||||||||    
T  19228538 agttccaagtcaaagttactactttaaacttcttaacatgtgcaaatttgcaca 19228591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 119 - 252
Target Start/End: Complemental strand, 39904213 - 39904078
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacata 216  Q
    ||||||||||||||  |||||||| ||||||||||  ||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  39904213 tgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatgtttaatataaaaaacata 39904114  T
Q  217 agttccaagttaaagttactactttaaactttttaa 252  Q
    |||||||||||||| |||||||||||||||| ||||    
T  39904113 agttccaagttaaatttactactttaaacttcttaa 39904078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 119 - 268
Target Start/End: Complemental strand, 16919319 - 16919166
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacata 216  Q
    ||||||||||||||  |||||||| ||||||||||  ||| ||||  |||||||||||||||||||||||||||| |||||||||||||||||||||| |    
T  16919319 tgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattgattaaaagttacatatttaatataaaaaacaca 16919220  T
Q  217 agttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    |||| ||||| |||||||||||||||||||| |||  |||||||||||||||||    
T  16919219 agtttcaagtcaaagttactactttaaacttgttaatatgtgcaaatttgcaca 16919166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 119 - 268
Target Start/End: Original strand, 22705467 - 22705620
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacata 216  Q
    ||||||||||||||  |||||||| ||||||||||  ||| ||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||| |    
T  22705467 tgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattaatttaaagttacatatttaatataaaaaacaca 22705566  T
Q  217 agttccaagttaaagttactactttaaacttttt--aatgtgcaaatttgcaca 268  Q
    |||| ||||||||| |||||||||||||||| ||  ||||||||||||||||||    
T  22705567 agtttcaagttaaaattactactttaaacttcttaaaatgtgcaaatttgcaca 22705620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 120 - 268
Target Start/End: Original strand, 14377438 - 14377590
Alignment:
Q  120 gtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacataa 217  Q
    |||||||||||||  |||||||||||||||||||  ||| |||| ||||||||||||||||||||  ||||||| |||||||||||||||||||||| ||    
T  14377438 gtgcaatattgcacatgttaaggcaactaaaagtagtaactttttattgaaaaccaacaattatttgttaaaagttacatatttaatataaaaaacacaa 14377537  T
Q  218 gttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    ||| ||||| |||||||||||||||||||| |||  |||| ||||||||||||    
T  14377538 gtttcaagtcaaagttactactttaaacttcttatcatgtacaaatttgcaca 14377590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 158 - 268
Target Start/End: Original strand, 4821330 - 4821442
Alignment:
Q  158 ttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaagttactactttaaacttttta--atgt 255  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||| | |||||||||||||||||||| |||  ||||    
T  4821330 ttttcattgaaaaccaacaattatttattaaaagctacatatttaatataaaaaacacaagtttcaaatcaaagttactactttaaacttcttatcatgt 4821429  T
Q  256 gcaaatttgcaca 268  Q
    |||||||||||||    
T  4821430 gcaaatttgcaca 4821442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 10690795 - 10690915
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacata 216  Q
    ||||||||||||||  |||||||  |||||||| |  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10690795 tgtgcaatattgcacatgttaagttaactaaaattagtaatttttcattaaaaaccaacaattattgattaaaagctacatatttaatataaaaaacata 10690894  T
Q  217 agttccaagttaaagttacta 237  Q
    |||| ||| ||||| ||||||    
T  10690895 agtttcaaattaaaattacta 10690915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 119 - 265
Target Start/End: Complemental strand, 13351377 - 13351226
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagt-gataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacat 215  Q
    ||||||||||||||  |||||||| |||||||||| | || ||||| |||||||| ||||||||||| |||||||| |||||||| |||||||||||||     
T  13351377 tgtgcaatattgcacatgttaaggtaactaaaagtagttatttttttattgaaaatcaacaattattaattaaaagttacatattaaatataaaaaacac 13351278  T
Q  216 aagttccaagttaaagttactactttaaacttttta--atgtgcaaatttgc 265  Q
    |||||| |||| |||||||||||||||||||| |||  ||||||||||||||    
T  13351277 aagttctaagtcaaagttactactttaaacttcttaacatgtgcaaatttgc 13351226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 138 - 268
Target Start/End: Complemental strand, 2060187 - 2060054
Alignment:
Q  138 aggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaa-agctacatatttaatataaaaaacataagttccaagttaaagttact 236  Q
    |||||||||||||| |||| |||||||| |||| ||||||||||| |||||| ||||||||||||||||||||| ||| || ||||||||||||||||||    
T  2060187 aggcaactaaaagtaataacttttcattaaaaatcaacaattatttattaaagagctacatatttaatataaaagacacaaattccaagttaaagttact 2060088  T
Q  237 actttaaacttttta--atgtgcaaatttgcaca 268  Q
    |||||||| || |||  ||||| |||||||||||    
T  2060087 actttaaatttcttaacatgtgtaaatttgcaca 2060054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 118 - 268
Target Start/End: Original strand, 16123290 - 16123444
Alignment:
Q  118 ctgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacat 215  Q
    |||||||||||||||  |||||||| |||||||||   ||| |||||||||||||| ||||||| ||||||||| | ||||||||||||||||||||||     
T  16123290 ctgtgcaatattgcacatgttaaggtaactaaaagaagtaacttttcattgaaaacaaacaattgttgattaaatgttacatatttaatataaaaaacac 16123389  T
Q  216 aagttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    ||||||| | | ||| |||||| ||||||||| |||  |||||||||||||||||    
T  16123390 aagttcctaatcaaaattactaatttaaacttcttatcatgtgcaaatttgcaca 16123444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 119 - 252
Target Start/End: Complemental strand, 26230018 - 26229884
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacata 216  Q
    ||||||||||||||  |||||||| ||||||||||  |||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  26230018 tgtgcaatattgcacatgttaaggtaactaaaagtagtaattttttatt-aaaaccaacaattattgattaaaagttacatatttaatataaaaaatata 26229920  T
Q  217 agttccaagttaaagttactactttaaactttttaa 252  Q
    | ||  |||| |||||||||| ||||||||| ||||    
T  26229919 aattttaagtcaaagttactattttaaacttcttaa 26229884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 135 - 268
Target Start/End: Complemental strand, 8771032 - 8770898
Alignment:
Q  135 ttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaagtta 234  Q
    |||||||||||||| ||  ||| |||||| | |||||||||||||||| |||||||| |||||||||||||||||||||| || || ||||| ||| |||    
T  8771032 ttaaggcaactaaa-gtagtaacttttcaataaaaaccaacaattatttattaaaagttacatatttaatataaaaaacaaaaatttcaagtcaaaatta 8770934  T
Q  235 ctactttaaacttttta--atgtgcaaatttgcaca 268  Q
    ||||||||||||| |||  |||||||||||||||||    
T  8770933 ctactttaaacttcttaacatgtgcaaatttgcaca 8770898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 119 - 268
Target Start/End: Complemental strand, 15411788 - 15411634
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaa-gctacatatttaatataaaaaacat 215  Q
    ||||||||||||||  |||||| | ||||||||||  |||||||| |||||||| ||||||| ||| ||||||| ||||||||||||||||||||   |     
T  15411788 tgtgcaatattgcacatgttaaagtaactaaaagtagtaattttttattgaaaaacaacaataatttattaaaaagctacatatttaatataaaatgaac 15411689  T
Q  216 aagttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    ||||| ||||  |||||||||| ||||||||| |||  |||||||||||||||||    
T  15411688 aagtttcaagacaaagttactattttaaacttcttaacatgtgcaaatttgcaca 15411634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 5583046 - 5583130
Alignment:
Q  19 taagaaagatgggtttttggcaagttacattattaactaaacnnnnnnnnnnnnnctaatgctataaaactataaaagctaatttcttcaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||||||||||    
T  5583046 taagaaagatgggtttttggcaagttacattattaactaaac------atatatactaatgctataaaactataaaagctaatttcttcaa 5583130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 119 - 208
Target Start/End: Complemental strand, 12438813 - 12438723
Alignment:
Q  119 tgtgcaatattgcat--gttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataa 208  Q
    |||||||||||||||  ||| || ||||||||| | |||| |||||||| |||||||||||||||| ||||||| ||| |||||||||||||    
T  12438813 tgtgcaatattgcatatgttcagacaactaaaaataataacttttcatt-aaaaccaacaattatttattaaaaactatatatttaatataa 12438723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 132 - 268
Target Start/End: Original strand, 45062225 - 45062364
Alignment:
Q  132 atgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaa-gctacatatttaatataaaaaacataagttccaagttaaa 230  Q
    |||||||  ||| |||||||| ||| |||| ||| |||| ||| ||||||| ||||||| | ||||| ||||||||||||  || |||||||||  ||||    
T  45062225 atgttaaaacaattaaaagtggtaactttttattaaaaaacaaaaattatttattaaaaagttacatgtttaatataaaatgcacaagttccaaaataaa 45062324  T
Q  231 gttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    ||||||| ||| ||||| |||  |||||||||||||||||    
T  45062325 gttactattttgaacttcttaatatgtgcaaatttgcaca 45062364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 268
Target Start/End: Complemental strand, 12919517 - 12919362
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttc-attgaaaaccaacaattattgattaaaag-ctacatatttaatataaaaaaca 214  Q
    ||||||||||||||  |||||| |||| |||||||  ||||||||  ||||||||  | |||| ||| |||||||  |||||||||||||||||||   |    
T  12919517 tgtgcaatattgcacatgttaaagcaattaaaagtattaatttttttattgaaaagtagcaataatttattaaaaaactacatatttaatataaaatgaa 12919418  T
Q  215 taagttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
     ||||| |||| ||||||||||| |||||| ||||||  ||||| |||||||||||    
T  12919417 caagtttcaagataaagttactattttaaattttttaacatgtgtaaatttgcaca 12919362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 157 - 268
Target Start/End: Original strand, 15231883 - 15231997
Alignment:
Q  157 tttttcattgaaaaccaacaattattgattaaaa-gctacatatttaatataaaaaacataagttccaagttaaagttactactttaaacttttta--at 253  Q
    ||||| |||||||| ||| | ||||| ||||||| | |||||||||||||| |||  || |||||  |||| |||||||| ||||||||||| |||  ||    
T  15231883 ttttttattgaaaaacaaaacttatttattaaaaagttacatatttaatatgaaatgcacaagttttaagtcaaagttaccactttaaacttcttaacat 15231982  T
Q  254 gtgcaaatttgcaca 268  Q
    |||||||||||||||    
T  15231983 gtgcaaatttgcaca 15231997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 135 - 263
Target Start/End: Complemental strand, 41492279 - 41492150
Alignment:
Q  135 ttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaagtta 234  Q
    |||||| || ||||||| ||| ||| | ||||||||  ||||||||||  | |||| || ||||||||||| ||||  || ||||| |||||||||||||    
T  41492279 ttaaggaaattaaaagtaatattttattattgaaaaagaacaattattt-taaaaaacttcatatttaataaaaaatgcacaagtttcaagttaaagtta 41492181  T
Q  235 ctactttaaacttttta--atgtgcaaattt 263  Q
     |||||||||||| |||  ||||||||||||    
T  41492180 ttactttaaacttcttatcatgtgcaaattt 41492150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 268
Target Start/End: Original strand, 9747400 - 9747483
Alignment:
Q  187 aaaagctacatatttaatataaaaaacataagttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    ||||||||||||||||||||||||   | ||||||||||  ||| |||||| ||||||||| |||  ||||| |||||||||||    
T  9747400 aaaagctacatatttaatataaaatgaacaagttccaagacaaaattactattttaaacttcttaacatgtgaaaatttgcaca 9747483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 210
Target Start/End: Complemental strand, 22162228 - 22162149
Alignment:
Q  131 catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgatt-aaaagctacatatttaatataaaa 210  Q
    |||||||||||||||||||||  ||| |||| |||| ||||||||||||| | ||| |||| ||||||| |||||||||||    
T  22162228 catgttaaggcaactaaaagtagtaactttttattg-aaaccaacaattaattattaaaaatctacatagttaatataaaa 22162149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 202
Target Start/End: Complemental strand, 25998154 - 25998082
Alignment:
Q  131 catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgatt-aaaagctacatattta 202  Q
    |||||||| | |||||||||||| || |||| |||||||| ||||||||||| ||| ||||| ||||||||||    
T  25998154 catgttaaagtaactaaaagtgaaaactttttattgaaaaacaacaattatttattaaaaagatacatattta 25998082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 157 - 263
Target Start/End: Complemental strand, 37471866 - 37471757
Alignment:
Q  157 tttttcattgaaaaccaacaattattgattaaaag-ctacatatttaatataaaaaacataagttccaagttaaagttactactttaaacttttta--at 253  Q
    ||||| |||||||  ||||||| ||| |||||||  |||||||||||||||||||   | ||||| ||||  |||||||||| ||||||||| |||  ||    
T  37471866 ttttttattgaaagacaacaataatttattaaaaaactacatatttaatataaaatgaacaagtttcaagacaaagttactattttaaacttcttaacat 37471767  T
Q  254 gtgcaaattt 263  Q
    ||||||||||    
T  37471766 gtgcaaattt 37471757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 119 - 190
Target Start/End: Complemental strand, 43388932 - 43388859
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaa 190  Q
    ||||||||||||||  | |||| ||||||||||||   ||||||| |||||||| ||||||||||| |||||||    
T  43388932 tgtgcaatattgcacatcttaaagcaactaaaagtagaaattttttattgaaaatcaacaattatttattaaaa 43388859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 108; Significance: 4e-54; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 119 - 268
Target Start/End: Original strand, 313762 - 313915
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacata 216  Q
    ||||||||||||||  |||||||| ||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  313762 tgtgcaatattgcacatgttaaggtaactaaaagtagtaatttttgattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacaca 313861  T
Q  217 agttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    ||||||||||||||||||||||||||||||| |||  |||||||||||||||||    
T  313862 agttccaagttaaagttactactttaaacttcttaacatgtgcaaatttgcaca 313915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 119 - 268
Target Start/End: Original strand, 17919466 - 17919619
Alignment:
Q  119 tgtgcaatattg--catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacata 216  Q
    ||||||||||||  |||||||||||||||||||||  ||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |    
T  17919466 tgtgcaatattgtacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttattaaaagttacatatttaatataaaaaacaca 17919565  T
Q  217 agttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    | |||||||| |||||||||||||||||||| |||  |||||||||||||||||    
T  17919566 aattccaagtcaaagttactactttaaacttcttattatgtgcaaatttgcaca 17919619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 119 - 268
Target Start/End: Complemental strand, 39150492 - 39150339
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacata 216  Q
    ||||||||||||||  |||||||||||||||||||  ||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |    
T  39150492 tgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttattaaaagttacatatttaatataaaaaacaca 39150393  T
Q  217 agttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    | |||||||| |||||||||||||||||||| |||  |||||||||||||||||    
T  39150392 aattccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcaca 39150339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 158 - 268
Target Start/End: Complemental strand, 6570109 - 6569997
Alignment:
Q  158 ttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaagttactactttaaacttttta--atgt 255  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||  ||||    
T  6570109 ttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacacaagttccaagttaaagttactactttaaacttcttaacatgt 6570010  T
Q  256 gcaaatttgcaca 268  Q
    |||||||||||||    
T  6570009 gcaaatttgcaca 6569997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 119 - 268
Target Start/End: Original strand, 8062217 - 8062370
Alignment:
Q  119 tgtgcaatattg--catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacata 216  Q
    ||||||||||||  |||||||||| ||||||||||  ||| ||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||    
T  8062217 tgtgcaatattgaacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaaactatatatttaatataaaaaacata 8062316  T
Q  217 agttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    | || ||| ||||||||||||||||||||||||||  |||||||||||||||||    
T  8062317 aatttcaaattaaagttactactttaaactttttaacatgtgcaaatttgcaca 8062370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 119 - 268
Target Start/End: Original strand, 44918037 - 44918190
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacata 216  Q
    ||||||||||||||  |||||||| ||||||||||  ||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  44918037 tgtgcaatattgcacatgttaaggtaactaaaagtagtaaatttttattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacata 44918136  T
Q  217 agttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    |||||||| ||||||||||||||||||| || |||  ||||| |||||||||||    
T  44918137 agttccaaattaaagttactactttaaatttcttaacatgtgtaaatttgcaca 44918190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 154 - 268
Target Start/End: Complemental strand, 30288992 - 30288876
Alignment:
Q  154 taatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaagttactactttaaacttttta-- 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||      
T  30288992 taatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacacaagttccaagttaaaattactactttaaacttcttaac 30288893  T
Q  252 atgtgcaaatttgcaca 268  Q
    ||||| |||||||||||    
T  30288892 atgtgtaaatttgcaca 30288876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 142 - 268
Target Start/End: Complemental strand, 39930941 - 39930813
Alignment:
Q  142 aactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaagttactacttt 241  Q
    ||||||||||  |||||||||||||||||| || ||||||| ||||||| |||||||| |||||||||||| | ||||| ||||||||||||||||||||    
T  39930941 aactaaaagtagtaatttttcattgaaaacaaataattatttattaaaaactacatatataatataaaaaatacaagtttcaagttaaagttactacttt 39930842  T
Q  242 aaacttttta--atgtgcaaatttgcaca 268  Q
    |||||| |||  |||||||||||||||||    
T  39930841 aaacttcttatcatgtgcaaatttgcaca 39930813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 119 - 268
Target Start/End: Original strand, 6754484 - 6754637
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaag-ctacatatttaatataaaaaacat 215  Q
    ||||||||||||||  ||||||||||||||||| |  ||| |||| ||||||| |||||||||| | |||||||  ||||||| |||||||||||  ||     
T  6754484 tgtgcaatattgcacatgttaaggcaactaaaaatagtaactttttattgaaa-ccaacaattaattattaaaaatctacataattaatataaaatgcac 6754582  T
Q  216 aagttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    ||||||||||| |||||||||||||||||||| |||  |||||||||||||||||    
T  6754583 aagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcaca 6754637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 119 - 247
Target Start/End: Complemental strand, 32716328 - 32716198
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacata 216  Q
    ||||||||||||||  |||||||| ||||||| |   ||| ||||| |||||||| ||||||||||||||||| | |||||||||||||||||||||| |    
T  32716328 tgtgcaatattgcacatgttaaggtaactaaatgaagtaacttttcgttgaaaacaaacaattattgattaaatgttacatatttaatataaaaaacaca 32716229  T
Q  217 agttccaagttaaagttactactttaaactt 247  Q
    |||||| | | ||| ||||||||||||||||    
T  32716228 agttcctaatcaaaattactactttaaactt 32716198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 131 - 268
Target Start/End: Original strand, 30171905 - 30172045
Alignment:
Q  131 catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaa-gctacatatttaatataaaaaacataagttccaagttaa 229  Q
    ||||||||| || ||||||||  |||||||| |||||||| ||| | ||||| ||||||| |||||||||||||||| |||  || ||||||||||| ||    
T  30171905 catgttaagacatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaatgcacaagttccaagtcaa 30172004  T
Q  230 agttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    |||||| ||||||||||| |||  |||||||||||||||||    
T  30172005 agttaccactttaaacttcttaacatgtgcaaatttgcaca 30172045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 131 - 268
Target Start/End: Original strand, 30187446 - 30187586
Alignment:
Q  131 catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaa-gctacatatttaatataaaaaacataagttccaagttaa 229  Q
    ||||||||| || ||||||||  |||||||| |||||||| ||| | ||||| ||||||| |||||||||||||||| |||  || ||||||||||| ||    
T  30187446 catgttaagacatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaatgcacaagttccaagtcaa 30187545  T
Q  230 agttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    |||||| ||||||||||| |||  |||||||||||||||||    
T  30187546 agttaccactttaaacttcttaacatgtgcaaatttgcaca 30187586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 131 - 268
Target Start/End: Complemental strand, 30363147 - 30363007
Alignment:
Q  131 catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagc-tacatatttaatataaaaaacataagttccaagttaa 229  Q
    ||||||||||| ||||||| |  ||| |||| |||||||||||||||||| | ||||||| | ||||||||||||||||||  || ||||||||||| ||    
T  30363147 catgttaaggctactaaaaatagtaactttttattgaaaaccaacaattaattattaaaaacctacatatttaatataaaatgcacaagttccaagtcaa 30363048  T
Q  230 agttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    |||||||| |||||| || |||  |||||||||||||||||    
T  30363047 agttactattttaaatttgttatcatgtgcaaatttgcaca 30363007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 154 - 261
Target Start/End: Complemental strand, 52833600 - 52833491
Alignment:
Q  154 taatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaagttactactttaaacttttta-- 251  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||| || || || ||||| ||| |||||| ||||||||| |||      
T  52833600 taatttttcattgaaaacaaacaattatttattaaaagctacatatttattataaaaatcacaaatttcaagtcaaaattactattttaaacttcttatc 52833501  T
Q  252 atgtgcaaat 261  Q
    ||||||||||    
T  52833500 atgtgcaaat 52833491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 119 - 268
Target Start/End: Original strand, 41624842 - 41624995
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaag-ctacatatttaatataaaaaacat 215  Q
    ||||||||||||||  |||||| |||||||||| |  ||| |||| ||||||| |||||||||| | |||||||  ||||||| |||||||||||  ||     
T  41624842 tgtgcaatattgcacatgttaaagcaactaaaaatagtaactttttattgaaa-ccaacaattaattattaaaaatctacataattaatataaaatgcac 41624940  T
Q  216 aagttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    ||||||||||| |||||||||||||||||||| |||  || ||||||||||||||    
T  41624941 aagttccaagtcaaagttactactttaaacttcttatcatatgcaaatttgcaca 41624995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 187 - 268
Target Start/End: Original strand, 3096292 - 3096375
Alignment:
Q  187 aaaagctacatatttaatataaaaaacataagttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    |||| |||||||||||||||||||||||||||||  |||||||| ||| ||||||||| ||||||  |||||||||||||||||    
T  3096292 aaaatctacatatttaatataaaaaacataagttttaagttaaaattattactttaaattttttatcatgtgcaaatttgcaca 3096375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 129 - 252
Target Start/End: Complemental strand, 21854271 - 21854147
Alignment:
Q  129 tgcatgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgatt-aaaagctacatatttaatataaaaaacataagttccaagtt 227  Q
    |||||||||||  | ||||||||  |||||||| |||||||| ||||| ||||| ||| ||||| ||| ||||||||||||||   | |||||||||||     
T  21854271 tgcatgttaagatatctaaaagtagtaatttttaattgaaaaacaacatttatttatttaaaagatacctatttaatataaaatgtacaagttccaagtc 21854172  T
Q  228 aaagttactactttaaactttttaa 252  Q
    |||||||| ||||||||||||||||    
T  21854171 aaagttaccactttaaactttttaa 21854147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 197 - 252
Target Start/End: Original strand, 10896446 - 10896501
Alignment:
Q  197 tatttaatataaaaaacataagttccaagttaaagttactactttaaactttttaa 252  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||    
T  10896446 tatttaatataaaaaacacaagttcaaagttaaagttactactttaaacttcttaa 10896501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 263
Target Start/End: Complemental strand, 44007612 - 44007547
Alignment:
Q  200 ttaatataaaaaacataagttccaagttaaagttactactttaaacttttta--atgtgcaaattt 263  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||| |||  ||||||||||||    
T  44007612 ttaatataaaaaacacaagttccaagttaaagttgctactttaaacttcttaacatgtgcaaattt 44007547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 119 - 182
Target Start/End: Original strand, 51382384 - 51382449
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattatt 182  Q
    ||||||||||||||  |||||||| ||||||||||  ||| |||||||||||||||||||||||||    
T  51382384 tgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattatt 51382449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 158 - 253
Target Start/End: Complemental strand, 31101058 - 31100962
Alignment:
Q  158 ttttcattgaaaaccaacaattattgattaaaa-gctacatatttaatataaaaaacataagttccaagttaaagttactactttaaactttttaat 253  Q
    ||||||||||||| ||||| ||||| ||||||| || |||||||||||||||||  || |||||  |||| |||||||| |||||||| || |||||    
T  31101058 ttttcattgaaaaacaacacttatttattaaaaagcaacatatttaatataaaatgcacaagttttaagtcaaagttaccactttaaatttcttaat 31100962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 265
Target Start/End: Original strand, 36490805 - 36490942
Alignment:
Q  131 catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgatt-aaaagctacatatttaatataaaaaacataagttccaagttaa 229  Q
    |||||||| |||| |||||||  ||| |||| |||||||| ||||||||||| ||| ||||| || ||||| |||| ||||   | |||||||||   ||    
T  36490805 catgttaaagcaattaaaagtagtaagtttttattgaaaaacaacaattatttattaaaaagttatatattaaatacaaaatgtacaagttccaatgcaa 36490904  T
Q  230 agttactactttaaacttttta--atgtgcaaatttgc 265  Q
    |||||||| ||||||||| |||  ||||||||||||||    
T  36490905 agttactattttaaacttcttaacatgtgcaaatttgc 36490942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 252
Target Start/End: Complemental strand, 21391994 - 21391929
Alignment:
Q  187 aaaagctacatatttaatataaaaaacataagttccaagttaaagttactactttaaactttttaa 252  Q
    |||| ||| |||||| |||||||| ||| |||||| |||  |||||||||||||||||||| ||||    
T  21391994 aaaaactaaatattttatataaaatacacaagttctaagccaaagttactactttaaacttcttaa 21391929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 268
Target Start/End: Original strand, 34801994 - 34802133
Alignment:
Q  131 catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaag-ctacatatttaatataaaaaacataagttccaagttaa 229  Q
    |||||||||  | ||||||||  |||||||| |||||||| ||| | ||||| |||||||  ||||||||||||||| |||  || ||||||| ||  ||    
T  34801994 catgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaaactacatatttaatatgaaatgcacaagttcc-agacaa 34802092  T
Q  230 agttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    | |||| | ||||||||| |||  |||||||||||||||||    
T  34802093 aattaccattttaaacttcttaacatgtgcaaatttgcaca 34802133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 43671742 - 43671795
Alignment:
Q  157 tttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaa 210  Q
    ||||| ||| |||| ||||||||||| |||||||| || |||||||||||||||    
T  43671742 ttttttatttaaaatcaacaattatttattaaaagttatatatttaatataaaa 43671795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 268
Target Start/End: Original strand, 43909276 - 43909357
Alignment:
Q  187 aaaagctacatatttaatataaaaaacataagttccaagttaaagttactactttaaactttttaatgtgcaaatttgcaca 268  Q
    ||||| || ||||||||||||||| ||| |||||  |||  ||| |||| | || ||| |||||||||||||||||||||||    
T  43909276 aaaagttatatatttaatataaaatacacaagttataagacaaacttaccatttaaaattttttaatgtgcaaatttgcaca 43909357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 104; Significance: 1e-51; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 119 - 268
Target Start/End: Original strand, 10129116 - 10129269
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacata 216  Q
    ||||||||||||||  |||||||| |||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  10129116 tgtgcaatattgcacatgttaaggtaactaaaattagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacaca 10129215  T
Q  217 agttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    |||||||||||||| |||||||||||||||| |||  |||||||||||||||||    
T  10129216 agttccaagttaaaattactactttaaacttcttaacatgtgcaaatttgcaca 10129269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 119 - 268
Target Start/End: Complemental strand, 7140624 - 7140471
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacata 216  Q
    ||||||||||||||  |||||||| ||||||||||  ||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| |    
T  7140624 tgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttattgaaaaccaacaattattgattaaaaactacatatttaatataaaaaacaca 7140525  T
Q  217 agttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    |||||||||||||| |||||||||||||||| |||  |||||||||||||||||    
T  7140524 agttccaagttaaaattactactttaaacttcttaatatgtgcaaatttgcaca 7140471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 119 - 247
Target Start/End: Original strand, 9743874 - 9744004
Alignment:
Q  119 tgtgcaatattg--catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacata 216  Q
    ||||||||||||  ||||||||| |||||||||||  |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  9743874 tgtgcaatattgtgcatgttaagacaactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttacatatttaatataaaaaacata 9743973  T
Q  217 agttccaagttaaagttactactttaaactt 247  Q
    |||||||||| ||||||||||||||||||||    
T  9743974 agttccaagtcaaagttactactttaaactt 9744004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 119 - 268
Target Start/End: Complemental strand, 13328106 - 13327953
Alignment:
Q  119 tgtgcaatattgcat--gttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacata 216  Q
    |||||||||||||||  ||||||| ||||||||||  ||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |    
T  13328106 tgtgcaatattgcatatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaatgttacatatttaatataaaaaacaca 13328007  T
Q  217 agttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    |||| ||||| |||||||||| ||||||||| |||  |||||||||||||||||    
T  13328006 agtttcaagtcaaagttactaatttaaacttcttaacatgtgcaaatttgcaca 13327953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 119 - 276
Target Start/End: Complemental strand, 40210986 - 40210825
Alignment:
Q  119 tgtgcaatattgcat--gttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacata 216  Q
    |||||||||||||||  ||||||| ||||||||||  ||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |    
T  40210986 tgtgcaatattgcatatgttaaggtaactaaaagtattaacttttcattgaaaaccaacaattattgattaaatgttacatatttaatataaaaaacaca 40210887  T
Q  217 agttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcacagaaaaacc 276  Q
    | ||| |||| |||||||||| ||||||| | |||  ||||||||||||||| |||||||||    
T  40210886 aattcaaagtcaaagttactaatttaaacgtcttaacatgtgcaaatttgcatagaaaaacc 40210825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 119 - 268
Target Start/End: Complemental strand, 39701968 - 39701815
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacata 216  Q
    ||||||||||||||  |||||||| ||||||||||  ||| ||||| ||||||||||||||||| | |||||||| |||||||||||||||||||||| |    
T  39701968 tgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcgttgaaaaccaacaattactaattaaaagttacatatttaatataaaaaacaca 39701869  T
Q  217 agttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    | || ||||| |||||||||||||||||||| |||  |||||||||||||||||    
T  39701868 aatttcaagtcaaagttactactttaaacttgttaacatgtgcaaatttgcaca 39701815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 145 - 268
Target Start/End: Complemental strand, 18567553 - 18567428
Alignment:
Q  145 taaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaagttactactttaaa 244  Q
    |||||||| ||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||| | ||||||||| |||||||||| ||||||    
T  18567553 taaaagtggtaacttttcattgaaaaccaacaattattgattaaatgttacatatttaatataaaaaacacatgttccaagtcaaagttactaatttaaa 18567454  T
Q  245 cttttta--atgtgcaaatttgcaca 268  Q
    ||| |||  |||||||||||||||||    
T  18567453 cttcttaacatgtgcaaatttgcaca 18567428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 119 - 268
Target Start/End: Original strand, 9801681 - 9801834
Alignment:
Q  119 tgtgcaatattg--catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacata 216  Q
    ||||||||||||  ||| |||| | || |||||||  ||| ||||||||||||| |||||||||||||||||||| || ||||||||||||| |||||||    
T  9801681 tgtgcaatattgtacatattaaagtaattaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagttatatatttaatataacaaacata 9801780  T
Q  217 agttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    |||| ||||| |||||||||||||||||||| |||  |||||||||||||||||    
T  9801781 agtttcaagtcaaagttactactttaaacttcttaacatgtgcaaatttgcaca 9801834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 131 - 262
Target Start/End: Original strand, 8140594 - 8140727
Alignment:
Q  131 catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaa 230  Q
    |||||||||||||||||||||  | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||  |||| |||    
T  8140594 catgttaaggcaactaaaagtagtgatttttcattgaaaaccaacaattatttattaaaagctacatatttaatataaaaaacataaattttaagtcaaa 8140693  T
Q  231 gttactactttaaacttttta--atgtgcaaatt 262  Q
     ||| |||||||| ||| |||  |||||||||||    
T  8140694 attattactttaatcttcttaacatgtgcaaatt 8140727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 119 - 268
Target Start/End: Complemental strand, 19344002 - 19343848
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaata-taaaaaacat 215  Q
    ||||||||||||||  |||||||| ||| ||||||  ||| ||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||| |     
T  19344002 tgtgcaatattgcacatgttaaggtaaccaaaagtagtaacttttcattgaaaaccaacaattattgagtaaaagttacatatttaatattaaaaaatac 19343903  T
Q  216 aagttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    ||||| ||||| ||| |||||||||||||| | |||  |||||||||||||||||    
T  19343902 aagtttcaagtcaaaattactactttaaacgtgttaacatgtgcaaatttgcaca 19343848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 119 - 247
Target Start/End: Original strand, 38527833 - 38527967
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgatt----aaaagctacatatttaatataaaaaa 212  Q
    ||||||||||||||  ||||||||||||||||||| |||| |||||||||||||||||| |||||| |||    ||||||||||||||||||||||||||    
T  38527833 tgtgcaatattgcacatgttaaggcaactaaaagtaataacttttcattgaaaaccaacgattatttatttattaaaagctacatatttaatataaaaaa 38527932  T
Q  213 cataagttccaagttaaagttactactttaaactt 247  Q
    || || |||||| | ||| ||| ||||||||||||    
T  38527933 cacaaattccaaatcaaaattattactttaaactt 38527967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 186 - 264
Target Start/End: Complemental strand, 45519658 - 45519578
Alignment:
Q  186 taaaagctacatatttaatataaaaaacataagttccaagttaaagttactactttaaacttttta--atgtgcaaatttg 264  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||  |||||||||||||    
T  45519658 taaaagctacatatttaatataaaaaacacaagttccaagttaaagttactactttaaacttcttatcatgtgcaaatttg 45519578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 119 - 268
Target Start/End: Complemental strand, 35678440 - 35678287
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgatt-aaaagctacatatttaatataaaaaacat 215  Q
    ||||||||||||||  |||||| | ||||||||||  ||| ||||||||||||||||||||||| | ||| ||||  |||||||||||||| ||| |||     
T  35678440 tgtgcaatattgcacatgttaaagaaactaaaagtagtaacttttcattgaaaaccaacaattaattattaaaaatttacatatttaatat-aaatacac 35678342  T
Q  216 aagttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    ||||| ||||| |||||||||||||||||||| |||  |||||||||||||||||    
T  35678341 aagtttcaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcaca 35678287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 119 - 268
Target Start/End: Original strand, 26682080 - 26682234
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttc-attgaaaaccaacaattattgattaaaa-gctacatatttaatataaaaaaca 214  Q
    ||||||||||||||  ||||||  |||||||||||  ||||||||  ||||||||| |||||||||| ||||||| |||||| |||||||||||||  ||    
T  26682080 tgtgcaatattgcacatgttaaaacaactaaaagtagtaatttttttattgaaaac-aacaattatttattaaaaagctacacatttaatataaaatgca 26682178  T
Q  215 taagttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
     ||||||||||| ||||||||||||||||| || |||  |||||||||||||||||    
T  26682179 caagttccaagtcaaagttactactttaaatttcttaacatgtgcaaatttgcaca 26682234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 137 - 268
Target Start/End: Complemental strand, 39025002 - 39024869
Alignment:
Q  137 aaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaag-ctacatatttaatataaaaaacataagttccaagttaaagttac 235  Q
    ||||||||||||||| |||| |||| ||||||| |||||||||| | |||||||  ||||||| |||||||||||  || || |||||||| ||||||||    
T  39025002 aaggcaactaaaagtaataactttttattgaaa-ccaacaattaattattaaaaatctacatagttaatataaaatgcacaaattccaagtcaaagttac 39024904  T
Q  236 tactttaaacttttta--atgtgcaaatttgcaca 268  Q
    |||||||||||| |||  |||||||||||||||||    
T  39024903 tactttaaacttcttatcatgtgcaaatttgcaca 39024869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 119 - 268
Target Start/End: Complemental strand, 14816291 - 14816138
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgatt-aaaagctacatatttaatataaaaaacat 215  Q
    ||||||||||||||  |||||| | ||||||||||  ||| |||| |||||||||||||||||| | ||| ||||  |||||||||||||| ||| |||     
T  14816291 tgtgcaatattgcacatgttaaagaaactaaaagtagtaactttttattgaaaaccaacaattaattattaaaaatttacatatttaatat-aaatacac 14816193  T
Q  216 aagttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    |||||  |||| ||||||||||||||||| || |||  |||||||||||||||||    
T  14816192 aagttttaagtcaaagttactactttaaatttcttatcatgtgcaaatttgcaca 14816138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 119 - 268
Target Start/End: Original strand, 14829449 - 14829602
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgatt-aaaagctacatatttaatataaaaaacat 215  Q
    ||||||||||||||  |||||| | ||||||||||  ||| |||| |||||||||||||||||| | ||| ||||  |||||||||||||| ||| |||     
T  14829449 tgtgcaatattgcacatgttaaagaaactaaaagtagtaactttttattgaaaaccaacaattaattattaaaaatttacatatttaatat-aaatacac 14829547  T
Q  216 aagttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    |||||  |||| ||||||||||||||||| || |||  |||||||||||||||||    
T  14829548 aagttttaagtcaaagttactactttaaatttcttatcatgtgcaaatttgcaca 14829602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 158 - 268
Target Start/End: Original strand, 1203655 - 1203767
Alignment:
Q  158 ttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaagttactactttaaacttttta--atgt 255  Q
    |||||||||||||| || ||||||| |||||  | |||||||||||||||||||||| |||||   | | ||| |||||||||||||||| |||  ||||    
T  1203655 ttttcattgaaaacaaataattattaattaactgttacatatttaatataaaaaacacaagtttttaatcaaaattactactttaaacttcttatcatgt 1203754  T
Q  256 gcaaatttgcaca 268  Q
    |||||||||||||    
T  1203755 gcaaatttgcaca 1203767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 131 - 268
Target Start/End: Complemental strand, 4084694 - 4084555
Alignment:
Q  131 catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaatt-attgattaaaagctacatatttaatataaaaaacataagttccaagttaa 229  Q
    |||||||||| || |||||||  ||| |||||||||||||| ||||||| |||  | ||||  |||||||||||||| |||  |||||||| ||||| ||    
T  4084694 catgttaaggaaagtaaaagtagtaacttttcattgaaaactaacaattaattactaaaaatttacatatttaatat-aaatgcataagtttcaagtcaa 4084596  T
Q  230 agttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    ||||||||||||||| || |||  |||||||||||||||||    
T  4084595 agttactactttaaatttcttatcatgtgcaaatttgcaca 4084555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 119 - 212
Target Start/End: Original strand, 39703466 - 39703561
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaa 212  Q
    ||||||||||||||  |||||||| ||||||||||  ||| ||||| || ||||||||||||||  | ||||||| ||||||||||||||||||||    
T  39703466 tgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcgttaaaaaccaacaattacgggttaaaagttacatatttaatataaaaaa 39703561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 131 - 268
Target Start/End: Complemental strand, 4080545 - 4080406
Alignment:
Q  131 catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaatt-attgattaaaagctacatatttaatataaaaaacataagttccaagttaa 229  Q
    |||||||||| || |||||||  ||| |||||||||||||| ||||||| |||  | ||||  |||||||||||||| |||  || ||||| ||||| ||    
T  4080545 catgttaaggaaagtaaaagtagtaacttttcattgaaaactaacaattaattactaaaaatttacatatttaatat-aaatgcacaagtttcaagtcaa 4080447  T
Q  230 agttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    ||||||||||||||| || |||  |||||||||||||||||    
T  4080446 agttactactttaaatttcttatcatgtgcaaatttgcaca 4080406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 131 - 268
Target Start/End: Complemental strand, 4103001 - 4102862
Alignment:
Q  131 catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaatt-attgattaaaagctacatatttaatataaaaaacataagttccaagttaa 229  Q
    |||||||||| || |||||||  ||| |||||||||||||| ||||||| |||  | ||||  |||||||||||||| |||  || ||||| ||||| ||    
T  4103001 catgttaaggaaagtaaaagtagtaacttttcattgaaaactaacaattaattactaaaaatttacatatttaatat-aaatgcaaaagtttcaagtcaa 4102903  T
Q  230 agttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    ||||||||||||||| || |||  |||||||||||||||||    
T  4102902 agttactactttaaatttcttatcatgtgcaaatttgcaca 4102862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 131 - 268
Target Start/End: Original strand, 31812139 - 31812279
Alignment:
Q  131 catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaa-gctacatatttaatataaaaaacataagttccaagttaa 229  Q
    |||||||||  | ||||||||  |||||||| ||||||||  || | ||||| ||||||| |||||||||||||||| |||  || ||||||||||| ||    
T  31812139 catgttaagatatctaaaagtagtaattttttattgaaaaataaaacttatttattaaaaagctacatatttaatatgaaatgcacaagttccaagtcaa 31812238  T
Q  230 agttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    | |||| | ||||||||| |||  |||||||||||||||||    
T  31812239 aattaccattttaaacttcttaatatgtgcaaatttgcaca 31812279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 200 - 252
Target Start/End: Original strand, 31451420 - 31451472
Alignment:
Q  200 ttaatataaaaaacataagttccaagttaaagttactactttaaactttttaa 252  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||| ||||    
T  31451420 ttaatataaaaaacacaagtttcaagttaaagttactactttaaacttcttaa 31451472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 268
Target Start/End: Complemental strand, 8284721 - 8284580
Alignment:
Q  131 catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaag--ctacatatttaatataaaaaacataagttccaagtta 228  Q
    |||||||| ||||||||||||  ||| |||| ||| ||||  |||||||||| |||||||   | || |||||||||||||| ||| |||||||||||      
T  8284721 catgttaaagcaactaaaagtagtaactttttattaaaaaagaacaattatttattaaaaagaccacctatttaatataaaatacacaagttccaagtcg 8284622  T
Q  229 aagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    ||||| ||| ||||||||| |||  |||| ||||||||||||    
T  8284621 aagttgctaatttaaacttcttaacatgtacaaatttgcaca 8284580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 244
Target Start/End: Original strand, 44091346 - 44091458
Alignment:
Q  132 atgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaag-ctacatatttaatataaaaaacataagttccaagttaaa 230  Q
    |||||||  |||| ||||||  |||||||| ||||||||| |||||||||| |||||||  ||||| |||||||||||||  || |||||| || | |||    
T  44091346 atgttaaaacaacgaaaagtattaattttttattgaaaac-aacaattatttattaaaaaactacaaatttaatataaaatgcacaagttctaaatcaaa 44091444  T
Q  231 gttactactttaaa 244  Q
    ||||||||||||||    
T  44091445 gttactactttaaa 44091458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 144 - 268
Target Start/End: Original strand, 26834600 - 26834727
Alignment:
Q  144 ctaaaagtgataatttttcattgaaaaccaacaattattgattaaaa-gctacatatttaatataaaaaacataagttccaagttaaagttactacttta 242  Q
    ||||||||  |||||||| |||||||| ||| | ||||| ||||||| |||||||||||||||| |||  || ||||||||||| ||| |||| | ||||    
T  26834600 ctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaatgcacaagttccaagtcaaaattaccatttta 26834699  T
Q  243 aacttttta--atgtgcaaatttgcaca 268  Q
    || || |||  || ||||||||||||||    
T  26834700 aatttcttaatatatgcaaatttgcaca 26834727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 132 - 212
Target Start/End: Original strand, 45516316 - 45516395
Alignment:
Q  132 atgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaa 212  Q
    ||||||||  ||||||||||  ||| |||| ||||||| | |||||||||| |||||||||||||||||||||||| ||||    
T  45516316 atgttaagataactaaaagtagtaactttttattgaaa-ctaacaattatttattaaaagctacatatttaatatataaaa 45516395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 131 - 225
Target Start/End: Original strand, 34249703 - 34249799
Alignment:
Q  131 catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgatt--aaaagctacatatttaatataaaaaacataagttccaag 225  Q
    |||| |||| || ||||||||  ||||||||||||||||| ||  ||||||| |||  ||||| || ||||||||||||||| ||| ||||||||||    
T  34249703 catgataagacagctaaaagtattaatttttcattgaaaaacactaattatttattaaaaaagttaaatatttaatataaaatacacaagttccaag 34249799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 268
Target Start/End: Complemental strand, 7393370 - 7393257
Alignment:
Q  157 tttttcattgaaaaccaacaattattgattaaaa-gctacatatttaatataaaaaacataagttccaagttaaagttactactttaaacttttta--at 253  Q
    |||||| ||||||| || |||||||| ||||||| | || ||||||||||||||| ||| ||||| ||||  ||| |||||| |||||| ||||||  ||    
T  7393370 tttttcgttgaaaaacaccaattatttattaaaaagttatatatttaatataaaatacacaagttacaagacaaa-ttactattttaaattttttaacat 7393272  T
Q  254 gtgcaaatttgcaca 268  Q
    ||||||||| |||||    
T  7393271 gtgcaaattcgcaca 7393257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 210
Target Start/End: Complemental strand, 32195961 - 32195888
Alignment:
Q  135 ttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaa-gctacatatttaatataaaa 210  Q
    |||| |||||||||| | ||||||||| |||||||| ||||   |||| ||||||| ||||||||||||||||||||    
T  32195961 ttaaagcaactaaaaataataattttttattgaaaaacaac---tatttattaaaatgctacatatttaatataaaa 32195888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 189
Target Start/End: Complemental strand, 35746054 - 35745982
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaa 189  Q
    |||||||||||| |  |||||| | |||||||||  |||| |||||||||||||| |||||||||| ||||||    
T  35746054 tgtgcaatattgaaattgttaaagtaactaaaagaaataacttttcattgaaaacaaacaattattaattaaa 35745982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 2e-49; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 119 - 268
Target Start/End: Original strand, 19889353 - 19889506
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacata 216  Q
    ||||||||||||||  |||||||||||||||||||  ||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |    
T  19889353 tgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttattaaaagttacatatttaatataaaaaacaca 19889452  T
Q  217 agttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    |||||||||| |||||||||||||||||||| |||  |||||||||||||||||    
T  19889453 agttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcaca 19889506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 119 - 268
Target Start/End: Complemental strand, 39757275 - 39757122
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacata 216  Q
    ||||||||||||||  |||||||| ||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |    
T  39757275 tgtgcaatattgcacatgttaaggtaactaaaagtagtaatttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaacaca 39757176  T
Q  217 agttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    | || |||||||||||||||| ||||||||| |||  |||||||||||||||||    
T  39757175 aatttcaagttaaagttactattttaaacttcttaacatgtgcaaatttgcaca 39757122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 119 - 268
Target Start/End: Complemental strand, 5909447 - 5909294
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacata 216  Q
    ||||||||||||||  ||||||||||||||||||   ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |    
T  5909447 tgtgcaatattgcacatgttaaggcaactaaaagcagtaacttttcattgaaaaccaacaattatttattaaaagctacatatttaatataaaaaacaca 5909348  T
Q  217 agttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    |||| ||||| |||||||||||||||||||| |||  |||||||||||| ||||    
T  5909347 agtttcaagtcaaagttactactttaaacttcttatcatgtgcaaatttacaca 5909294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 142 - 266
Target Start/End: Complemental strand, 384570 - 384444
Alignment:
Q  142 aactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaagttactacttt 241  Q
    ||||||||||  ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  384570 aactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaaaacaagttccaagttaaagttactacttt 384471  T
Q  242 aaacttttta--atgtgcaaatttgca 266  Q
    |||||| |||  |||||||||||||||    
T  384470 aaacttcttaacatgtgcaaatttgca 384444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 119 - 268
Target Start/End: Complemental strand, 3562043 - 3561890
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacata 216  Q
    ||||||||||||||  |||||||| |||||||||   ||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |    
T  3562043 tgtgcaatattgcacatgttaaggtaactaaaagcagtaacttttcattgaaaatcaataattattgattaaaagctacatatttaatataaaaaacaca 3561944  T
Q  217 agttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    ||||  ||||||||||||||||||||||||| |||  |||||||||||||||||    
T  3561943 agttttaagttaaagttactactttaaacttcttaacatgtgcaaatttgcaca 3561890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 119 - 268
Target Start/End: Original strand, 9331974 - 9332127
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacata 216  Q
    ||||||||||||||  |||||||| ||||||||||  ||| ||||||||||||| |||||||||||||||||| | |||||||||||||||||||||| |    
T  9331974 tgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaatgttacatatttaatataaaaaacaca 9332073  T
Q  217 agttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    |||| ||||| |||||||||| ||||||||| |||  |||||||||||||||||    
T  9332074 agtttcaagtcaaagttactaatttaaacttcttaacatgtgcaaatttgcaca 9332127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 119 - 247
Target Start/End: Complemental strand, 47120359 - 47120229
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacata 216  Q
    ||||||||||||||  ||||| || ||||||||||  |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |    
T  47120359 tgtgcaatattgcacatgttatggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaatgttacatatttaatataaaaaacaca 47120260  T
Q  217 agttccaagttaaagttactactttaaactt 247  Q
    |||||||||| |||||||||| |||||||||    
T  47120259 agttccaagtcaaagttactaatttaaactt 47120229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 119 - 268
Target Start/End: Complemental strand, 36548625 - 36548472
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacata 216  Q
    ||||||||||||||  |||||||| ||||||||||  |||||||| |||||||||||||||||||||||||||   |||||||||||||||||||| | |    
T  36548625 tgtgcaatattgcacatgttaagggaactaaaagtagtaattttttattgaaaaccaacaattattgattaaatattacatatttaatataaaaaataca 36548526  T
Q  217 agttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    | ||  |||| |||||||||| ||||||||| |||  |||||||||||||||||    
T  36548525 aattttaagtcaaagttactaatttaaacttcttaacatgtgcaaatttgcaca 36548472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 131 - 268
Target Start/End: Complemental strand, 23982907 - 23982767
Alignment:
Q  131 catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagct-acatatttaatataaaaaacataagttccaagttaa 229  Q
    |||||||||||||||||||||  ||| |||||||| |||||||||||||| | ||||||| || | ||||||||||||||| ||| ||||||||||| ||    
T  23982907 catgttaaggcaactaaaagtagtaacttttcattcaaaaccaacaattaattattaaaaacttaaatatttaatataaaatacacaagttccaagtcaa 23982808  T
Q  230 agttactactttaaactttttaa--tgtgcaaatttgcaca 268  Q
    ||||||||||||||| || ||||  ||||||||||||||||    
T  23982807 agttactactttaaatttcttaacgtgtgcaaatttgcaca 23982767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 131 - 268
Target Start/End: Complemental strand, 12086082 - 12085943
Alignment:
Q  131 catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaa 230  Q
    |||||||||||||||||||||  ||| ||||| ||||||| ||||||||||| |||||||| || ||||||||||||||||||| ||||| ||||| |||    
T  12086082 catgttaaggcaactaaaagtagtaacttttcgttgaaaatcaacaattatttattaaaagttaaatatttaatataaaaaacacaagtttcaagtcaaa 12085983  T
Q  231 gttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
     |||||  ||||||||| |||  |||||||||||||||||    
T  12085982 attacttatttaaacttcttattatgtgcaaatttgcaca 12085943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 154 - 268
Target Start/End: Complemental strand, 18102359 - 18102242
Alignment:
Q  154 taatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataa-aaaacataagttccaagttaaagttactactttaaacttttta- 251  Q
    ||||||||||||||||| |||||||||||||||||| | |||||||||||||||| |||||| ||||| ||||| ||||||| || ||||||||| |||     
T  18102359 taatttttcattgaaaatcaacaattattgattaaatgttacatatttaatataaaaaaacacaagtttcaagtcaaagttattaatttaaacttcttaa 18102260  T
Q  252 -atgtgcaaatttgcaca 268  Q
     |||||||||||||||||    
T  18102259 catgtgcaaatttgcaca 18102242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 119 - 268
Target Start/End: Original strand, 7170015 - 7170168
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaag-ctacatatttaatataaaaaacat 215  Q
    ||||||||||||||  ||||||||||||||||| |  ||| |||| ||||||| |||||||||| | |||||||  ||||||| |||||||||||  ||     
T  7170015 tgtgcaatattgcacatgttaaggcaactaaaaatagtaactttttattgaaa-ccaacaattaattattaaaaatctacataattaatataaaatgcac 7170113  T
Q  216 aagttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    ||||||||||| |||||||||||||||||||| |||  |||||||||||||||||    
T  7170114 aagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcaca 7170168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 119 - 208
Target Start/End: Original strand, 24250326 - 24250417
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataa 208  Q
    ||||||||||||||  |||||||| ||||||||||  ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  24250326 tgtgcaatattgcacatgttaaggaaactaaaagtattaacttttcattgaaaaccaacaattatttattaaaagctacatatttaatataa 24250417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 119 - 268
Target Start/End: Complemental strand, 47457627 - 47457473
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttc-attgaaaaccaacaattattgatt-aaaagctacatatttaatataaaaaaca 214  Q
    ||||||||||||||  ||||||  |||||||||||  ||||||||  ||||||||  |||||||||| ||| |||||||||| || ||||||||||  ||    
T  47457627 tgtgcaatattgcacatgttaaaacaactaaaagtagtaatttttttattgaaaat-aacaattatttatttaaaagctacacatataatataaaatgca 47457529  T
Q  215 taagttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    ||| |||||||| ||||||||||||||||| ||||||  |||||||||||||||||    
T  47457528 taaattccaagtcaaagttactactttaaattttttaacatgtgcaaatttgcaca 47457473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 176 - 252
Target Start/End: Original strand, 8170593 - 8170669
Alignment:
Q  176 aattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaagttactactttaaactttttaa 252  Q
    |||||||||||||||| || ||||||||||||||||| | |||||  ||||||||||||||||||||||||||||||    
T  8170593 aattattgattaaaagttatatatttaatataaaaaataaaagttttaagttaaagttactactttaaactttttaa 8170669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 187 - 268
Target Start/End: Complemental strand, 41331551 - 41331468
Alignment:
Q  187 aaaagctacatatttaatataaaaaacataagttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    |||| |||||||||||||||||||  || ||||||||||| ||||||||||||||||| || |||  |||||||||||||||||    
T  41331551 aaaacctacatatttaatataaaatgcacaagttccaagtcaaagttactactttaaatttcttatcatgtgcaaatttgcaca 41331468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 131 - 268
Target Start/End: Complemental strand, 25709551 - 25709411
Alignment:
Q  131 catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgatt-aaaagctacatatttaatataaaaaacataagttccaagttaa 229  Q
    ||||||||  |||||||||||  |||||||| ||||| || ||||||| ||| ||| ||||||||| |||||||||| |||   | |||||||||   ||    
T  25709551 catgttaaatcaactaaaagtagtaattttttattgataaacaacaataatttattaaaaagctacctatttaatatgaaatgaacaagttccaatacaa 25709452  T
Q  230 agttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    |||||||| ||||||||| |||  |||||||||||||||||    
T  25709451 agttactattttaaacttcttaacatgtgcaaatttgcaca 25709411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 19868126 - 19868235
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgat-taaaagctacatatttaatataaaaaacat 215  Q
    ||||||||||||||  ||||||| |||||||||||  ||| ||||||||||||| || |||||||| ||  ||||| || ||||||||||||||| |||     
T  19868126 tgtgcaatattgcacatgttaagacaactaaaagtagtaaattttcattgaaaaacaccaattatttatcaaaaagttatatatttaatataaaatacac 19868225  T
Q  216 aagttccaag 225  Q
    ||||| ||||    
T  19868226 aagtttcaag 19868235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 268
Target Start/End: Complemental strand, 24463106 - 24462967
Alignment:
Q  131 catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgatt-aaaagctacatatttaatataaaaaacataagttccaagttaa 229  Q
    |||||||||||||||||||||  |||||| | |||||||| |||||| |||| ||| |||| |||||||||||||||||||   | ||  |  |||| ||    
T  24463106 catgttaaggcaactaaaagtagtaatttcttattgaaaa-caacaagtatttattaaaaaactacatatttaatataaaatgtacaaactttaagtcaa 24463008  T
Q  230 agttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    ||||| || ||||||||| |||  |||||||||||||||||    
T  24463007 agttattattttaaacttcttaacatgtgcaaatttgcaca 24462967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 187 - 268
Target Start/End: Original strand, 5833438 - 5833521
Alignment:
Q  187 aaaagctacatatttaatataaaaaacataagttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    ||||||||||||||||||||| ||  || |||||| |||   |||||||| ||||||||||||||  |||||||||||||||||    
T  5833438 aaaagctacatatttaatatagaatgcacaagttctaagacgaagttactgctttaaactttttaacatgtgcaaatttgcaca 5833521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 24699188 - 24699240
Alignment:
Q  158 ttttcattgaaaaccaacaattattgatta-aaagctacatatttaatataaa 209  Q
    ||||||||||||| ||||||||||| |||| |||| |||||||||||||||||    
T  24699188 ttttcattgaaaaacaacaattatttattataaagttacatatttaatataaa 24699240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 209
Target Start/End: Original strand, 39869137 - 39869228
Alignment:
Q  121 tgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgatt-aaaagctacatatttaatataaa 209  Q
    ||||||||||||  |||||| | |||||||| |  ||| ||||||||||||||||||||||| | ||| ||||  |||||||||||||||||    
T  39869137 tgcaatattgcacatgttaaagaaactaaaaatagtaacttttcattgaaaaccaacaattaattattaaaaatttacatatttaatataaa 39869228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 204 - 268
Target Start/End: Original strand, 8594998 - 8595063
Alignment:
Q  204 tataaaaaacataagttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    ||||||||||| ||||||||||||||||| |||| ||||||||| |||  ||||| |||||||||||    
T  8594998 tataaaaaacacaagttccaagttaaagtcacta-tttaaacttcttaacatgtgtaaatttgcaca 8595063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 208 - 247
Target Start/End: Original strand, 24250602 - 24250641
Alignment:
Q  208 aaaaacataagttccaagttaaagttactactttaaactt 247  Q
    ||||||| ||||||||||| ||||||||||||||||||||    
T  24250602 aaaaacacaagttccaagtcaaagttactactttaaactt 24250641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 268
Target Start/End: Complemental strand, 7899615 - 7899498
Alignment:
Q  154 taatttttcattgaaaaccaacaattattgattaaaa-gctacatatttaatataaaaaacataagttccaagttaaagttactactttaaacttttta- 251  Q
    ||||||||||||||||| || |||| ||| ||||||| | || ||||||||||||||| | | |||||  |||  ||| |||| | |||||| ||||||     
T  7899615 taatttttcattgaaaaacaccaataatttattaaaatgttatatatttaatataaaatatacaagttataagacaaacttaccattttaaattttttaa 7899516  T
Q  252 -atgtgcaaatttgcaca 268  Q
     |||||||||||||||||    
T  7899515 catgtgcaaatttgcaca 7899498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 119 - 190
Target Start/End: Original strand, 12650833 - 12650906
Alignment:
Q  119 tgtgcaatattg--catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaa 190  Q
    ||||||||||||  ||||||||| ||||||||| |  ||| |||||||||||||| | |||||||| |||||||    
T  12650833 tgtgcaatattgtacatgttaagccaactaaaaatagtaacttttcattgaaaactaccaattatttattaaaa 12650906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 2e-49; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 119 - 268
Target Start/End: Original strand, 11610927 - 11611080
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacata 216  Q
    ||||||||||||||  |||||||||||||||||||  ||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |    
T  11610927 tgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttattaaaagttacatatttaatataaaaaacaca 11611026  T
Q  217 agttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    |||||||||| |||||||||||||||||||| |||  |||||||||||||||||    
T  11611027 agttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcaca 11611080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 132 - 268
Target Start/End: Complemental strand, 16875175 - 16875037
Alignment:
Q  132 atgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaag 231  Q
    ||||||||| ||||||||||  |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  16875175 atgttaaggtaactaaaagtagtaattttttattgaaaaccaacaattgttgattaaaagctacatatttaatataaaaaacacaagtttcaagttaaag 16875076  T
Q  232 ttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    |||||||||||||||| |||  |||||||||||||||||    
T  16875075 ttactactttaaacttcttaacatgtgcaaatttgcaca 16875037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 119 - 268
Target Start/End: Original strand, 3863342 - 3863495
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacata 216  Q
    ||||||||||||||  |||||||| ||||||| ||  ||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |    
T  3863342 tgtgcaatattgcacatgttaaggtaactaaaggtagtaacttttcattgaaaatcagcaattattgattaaaagctacatatttaatataaaaaacaca 3863441  T
Q  217 agttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    ||||||||| ||||||||||||||||||||| |||  |||||||||||||||||    
T  3863442 agttccaagctaaagttactactttaaacttcttaacatgtgcaaatttgcaca 3863495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 119 - 268
Target Start/End: Original strand, 20938069 - 20938223
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatat-aaaaaacat 215  Q
    ||||||||||||||  |||||||| |||||||||| |||| |||| ||||||||| ||||||||||||||||||  |||||||||||||| ||||||||     
T  20938069 tgtgcaatattgcacatgttaaggtaactaaaagtaataactttttattgaaaactaacaattattgattaaaaattacatatttaatataaaaaaacac 20938168  T
Q  216 aagttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    ||||||||||| |||||||||||||||||||| |||  |||||||||||||||||    
T  20938169 aagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcaca 20938223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 131 - 247
Target Start/End: Original strand, 50364217 - 50364333
Alignment:
Q  131 catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaa 230  Q
    ||||| |||| ||||||||||  ||| || | ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||    
T  50364217 catgtaaaggtaactaaaagtagtaacttataattgaaaaccaacaattattgattaaaagttacatatttaatataaaaaacacaagttccaagtcaaa 50364316  T
Q  231 gttactactttaaactt 247  Q
    |||||||||||||||||    
T  50364317 gttactactttaaactt 50364333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 119 - 249
Target Start/End: Complemental strand, 54621383 - 54621251
Alignment:
Q  119 tgtgcaatattgcat--gttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacata 216  Q
    |||||||||||||||  ||||||| || |||||||  |||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||| |    
T  54621383 tgtgcaatattgcatatgttaaggtaattaaaagtagtaatttttcattaaaaaccaacaattattgattaaatgttacatatttaatataaaaaacaca 54621284  T
Q  217 agttccaagttaaagttactactttaaactttt 249  Q
    | |||||||| |||||||||| |||||| ||||    
T  54621283 acttccaagtcaaagttactaatttaaattttt 54621251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 119 - 214
Target Start/End: Complemental strand, 51339349 - 51339252
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaaca 214  Q
    ||||||||||||||  |||||||| |||||||| |  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  51339349 tgtgcaatattgcacatgttaaggtaactaaaaatagtaatttttcattgaaaaccaacaattattgattaaaagctacgtatttaatataaaaaaca 51339252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 131 - 268
Target Start/End: Original strand, 13495320 - 13495460
Alignment:
Q  131 catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagc-tacatatttaatataaaaaacataagttccaagttaa 229  Q
    |||||||||| ||||||||||  |||||||| |||||||| ||||||||||| ||||||| | ||||||||||||||||||  || ||||||||||| ||    
T  13495320 catgttaaggtaactaaaagtagtaattttttattgaaaatcaacaattatttattaaaaacctacatatttaatataaaatgcacaagttccaagtcaa 13495419  T
Q  230 agttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    | |||||||||||||||| |||  |||||||||||| ||||    
T  13495420 aattactactttaaacttcttatcatgtgcaaattttcaca 13495460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 158 - 268
Target Start/End: Original strand, 29686374 - 29686486
Alignment:
Q  158 ttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaagttactactttaaacttttta--atgt 255  Q
    |||||| |||| | ||||||||||| ||||||||||| |||| |||||||||||||| |||||| ||||||||||||||||||||||||| |||  ||||    
T  29686374 ttttcactgaatatcaacaattatttattaaaagctatatatgtaatataaaaaacacaagttctaagttaaagttactactttaaacttcttatcatgt 29686473  T
Q  256 gcaaatttgcaca 268  Q
    |||||||||||||    
T  29686474 gcaaatttgcaca 29686486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 131 - 268
Target Start/End: Original strand, 40497074 - 40497213
Alignment:
Q  131 catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaag-ctacatatttaatataaaaaacataagttccaagttaa 229  Q
    |||||||||||||||||||||  ||| |||| ||||||| | |||||||| | |||||||  ||||||| |||||||||||  || |||||| |||||||    
T  40497074 catgttaaggcaactaaaagtagtaactttttattgaaatc-aacaattaattattaaaaatctacatagttaatataaaatgcacaagttctaagttaa 40497172  T
Q  230 agttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    |||||||||||||||||| |||  |||||||||||||||||    
T  40497173 agttactactttaaacttcttatcatgtgcaaatttgcaca 40497213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 131 - 252
Target Start/End: Original strand, 32553393 - 32553514
Alignment:
Q  131 catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaa 230  Q
    |||||||||| || |||||||  ||| ||||||||||||| ||| |||||||  |||||   |||||||||||||||||||||| ||||| ||| |||||    
T  32553393 catgttaaggtaattaaaagtagtaacttttcattgaaaatcaataattattagttaaatattacatatttaatataaaaaacacaagtttcaaattaaa 32553492  T
Q  231 gttactactttaaactttttaa 252  Q
    |||| || ||||||||| ||||    
T  32553493 gttattaatttaaacttcttaa 32553514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 131 - 268
Target Start/End: Original strand, 38389473 - 38389613
Alignment:
Q  131 catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaa-gctacatatttaatataaaaaacataagttccaagttaa 229  Q
    |||||||||  | ||||||||  |||||||| |||||||| ||| | ||||| ||||||| |||||||||||||||| |||  || ||||||||||| ||    
T  38389473 catgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaatgcacaagttccaagtcaa 38389572  T
Q  230 agttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    | |||| ||||||||||| |||  |||||||||||||||||    
T  38389573 aattaccactttaaacttcttaacatgtgcaaatttgcaca 38389613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 252
Target Start/End: Original strand, 24978700 - 24978794
Alignment:
Q  158 ttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaagttactactttaaactttttaa 252  Q
    |||| ||||| |||||| |||||||||||||||  |||||||| ||| ||||||||| ||||| ||||| || || |||||||||||||| ||||    
T  24978700 tttttattgagaaccaataattattgattaaaaattacatattaaatttaaaaaacacaagtttcaagtcaacgtaactactttaaacttgttaa 24978794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 119 - 268
Target Start/End: Complemental strand, 46492509 - 46492355
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaa-aagctacatatttaatataaaaaacat 215  Q
    ||||||||||||||  |||||| ||||||||||||| ||| |||| |||||||| ||||||||||| |||||  || || |||||||||| ||||   |     
T  46492509 tgtgcaatattgcacatgttaaagcaactaaaagtggtaagtttttattgaaaaacaacaattatttattaacgagttatatatttaatacaaaatgtac 46492410  T
Q  216 aagttccaagttaaagttactactttaaactttttaa--tgtgcaaatttgcaca 268  Q
    ||||| |||   ||||||||||||||||| || ||||  |||| |||||||||||    
T  46492409 aagtttcaatgcaaagttactactttaaatttcttaacgtgtgaaaatttgcaca 46492355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 188 - 268
Target Start/End: Original strand, 23523030 - 23523112
Alignment:
Q  188 aaagctacatatttaatataaaaaacataagttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    ||||||||||||||||||| |||  || ||||||||||| ||| |||| ||||||||||| |||  |||||||||||||||||    
T  23523030 aaagctacatatttaatatgaaatgcacaagttccaagtcaaaattaccactttaaacttcttaacatgtgcaaatttgcaca 23523112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 268
Target Start/End: Original strand, 11611090 - 11611142
Alignment:
Q  218 gttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    ||||||||| |||||||||||||||||||| |||  |||||||||||||||||    
T  11611090 gttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcaca 11611142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 187 - 252
Target Start/End: Complemental strand, 36426504 - 36426439
Alignment:
Q  187 aaaagctacatatttaatataaaaaacataagttccaagttaaagttactactttaaactttttaa 252  Q
    |||||||||||||||||||| |||  || ||||||||||| ||| |||| ||||||||||| ||||    
T  36426504 aaaagctacatatttaatatgaaatgcacaagttccaagtcaaaattaccactttaaacttcttaa 36426439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 136 - 195
Target Start/End: Complemental strand, 30214156 - 30214098
Alignment:
Q  136 taaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctac 195  Q
    ||||||||||||||  | ||| ||||||||||||| ||||||||||| ||||||||||||    
T  30214156 taaggcaactaaaatag-taacttttcattgaaaatcaacaattatttattaaaagctac 30214098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 268
Target Start/End: Original strand, 41151734 - 41151799
Alignment:
Q  205 ataaaaaacataagttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    |||||||| | |||||||||||| || |||||||||||||||| |||  ||||| |||||||||||    
T  41151734 ataaaaaatacaagttccaagttcaaattactactttaaacttcttatcatgtgtaaatttgcaca 41151799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 119 - 190
Target Start/End: Complemental strand, 46845606 - 46845533
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaa 190  Q
    ||||||||||||||  | |||| ||||||||||||   ||||||| |||||||| ||||||||||| |||||||    
T  46845606 tgtgcaatattgcacatcttaaagcaactaaaagtagaaattttttattgaaaatcaacaattatttattaaaa 46845533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 248
Target Start/End: Original strand, 53794790 - 53794908
Alignment:
Q  131 catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaa-gctacatatttaatataaaaaacataagttccaagttaa 229  Q
    ||||||||  ||||||||| | |||| | || ||||||||  |||||| ||| ||||||| | ||||||||||||||||||   ||||||| |||| |||    
T  53794790 catgttaaaccaactaaaaataataactatttattgaaaagtaacaataatttattaaaaagttacatatttaatataaaatgaataagtttcaagataa 53794889  T
Q  230 agttactactttaaacttt 248  Q
    |||||  | ||||||||||    
T  53794890 agttataattttaaacttt 53794908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 96; Significance: 6e-47; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 119 - 268
Target Start/End: Complemental strand, 52944 - 52791
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacata 216  Q
    ||||||||||||||  |||||||| ||||||||||  ||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |    
T  52944 tgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaaagttacatatttaatacaaaaaacaca 52845  T
Q  217 agttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    |||||||||| |||||||||||||||||||| |||  |||||||||||||||||    
T  52844 agttccaagtcaaagttactactttaaacttcttaacatgtgcaaatttgcaca 52791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 96; Significance: 6e-47; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 119 - 268
Target Start/End: Original strand, 145690 - 145843
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacata 216  Q
    ||||||||||||||  |||||||| ||||||||||  ||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |    
T  145690 tgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaaagttacatatttaatacaaaaaacaca 145789  T
Q  217 agttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    |||||||||| |||||||||||||||||||| |||  |||||||||||||||||    
T  145790 agttccaagtcaaagttactactttaaacttcttaacatgtgcaaatttgcaca 145843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 96; Significance: 6e-47; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 119 - 268
Target Start/End: Original strand, 13098 - 13251
Alignment:
Q  119 tgtgcaatattgcat--gttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacata 216  Q
    |||||||||||||||  ||||||| ||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |    
T  13098 tgtgcaatattgcatatgttaaggtaactaaaagtagtaatttttcattgaaaaccaacaattgttgattaaaagctacatatttaatataaaaaacaca 13197  T
Q  217 agttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    | |||||| |||||||||||| ||||||||| |||  |||||||||||||||||    
T  13198 aattccaaattaaagttactattttaaacttcttaacatgtgcaaatttgcaca 13251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 96; Significance: 6e-47; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 119 - 247
Target Start/End: Complemental strand, 5363058 - 5362928
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacata 216  Q
    ||||||||||||||  |||||||| ||||||||||  ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |    
T  5363058 tgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattgttgattaaaagctacatatttaatataaaaaacaca 5362959  T
Q  217 agttccaagttaaagttactactttaaactt 247  Q
    |||||||||||||||||||||||||||||||    
T  5362958 agttccaagttaaagttactactttaaactt 5362928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 131 - 252
Target Start/End: Complemental strand, 22974724 - 22974603
Alignment:
Q  131 catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaa 230  Q
    |||||||||| ||||||||||  ||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  22974724 catgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagttacatatttaatataaaaaacacaagttccaagttaaa 22974625  T
Q  231 gttactactttaaactttttaa 252  Q
    ||||||| ||||||||| ||||    
T  22974624 gttactattttaaacttcttaa 22974603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 131 - 252
Target Start/End: Original strand, 23813677 - 23813798
Alignment:
Q  131 catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaa 230  Q
    |||||||||| ||||||||||  ||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  23813677 catgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagttacatatttaatataaaaaacacaagttccaagttaaa 23813776  T
Q  231 gttactactttaaactttttaa 252  Q
    ||||||| ||||||||| ||||    
T  23813777 gttactattttaaacttcttaa 23813798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 131 - 264
Target Start/End: Complemental strand, 2830832 - 2830697
Alignment:
Q  131 catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaa 230  Q
    |||||||||| ||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| || |||||    
T  2830832 catgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacacaaattctaaattaaa 2830733  T
Q  231 gttactactttaaacttttta--atgtgcaaatttg 264  Q
    |||| || ||||||||| |||  |||||||||||||    
T  2830732 gttattattttaaacttcttaacatgtgcaaatttg 2830697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 131 - 268
Target Start/End: Complemental strand, 31069733 - 31069594
Alignment:
Q  131 catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaa 230  Q
    |||||||||| ||||||||||  ||| |||| ||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||| |||    
T  31069733 catgttaaggtaactaaaagtagtaagtttttattgaaaaccaacaattattgattaaatgttacatatttaatataaaaaacacaagttccaagtcaaa 31069634  T
Q  231 gttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    ||||||| ||||||||| |||  ||||| |||||||||||    
T  31069633 gttactaatttaaacttcttaacatgtgtaaatttgcaca 31069594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 131 - 268
Target Start/End: Complemental strand, 31169915 - 31169775
Alignment:
Q  131 catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagc-tacatatttaatataaaaaacataagttccaagttaa 229  Q
    ||||||||||| ||||||| |  ||||||||| ||||||||||| ||||| | ||||||| | ||||||||||||||||||  || ||||||||||| ||    
T  31169915 catgttaaggctactaaaaatagtaatttttctttgaaaaccaataattaattattaaaaacctacatatttaatataaaatgcacaagttccaagtcaa 31169816  T
Q  230 agttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    ||||||||||||||| || |||  |||||||||||| ||||    
T  31169815 agttactactttaaatttgttaacatgtgcaaatttacaca 31169775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 158 - 268
Target Start/End: Original strand, 31568163 - 31568275
Alignment:
Q  158 ttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaagttactactttaaacttttta--atgt 255  Q
    |||| |||||||| |||||||| ||  | |||||||||||||||| ||||||||||| ||||| ||| | ||||||||||||||||||||||||  ||||    
T  31568163 tttttattgaaaatcaacaatttttattcaaaagctacatatttattataaaaaacacaagtttcaaatcaaagttactactttaaactttttaacatgt 31568262  T
Q  256 gcaaatttgcaca 268  Q
    |||||||||||||    
T  31568263 gcaaatttgcaca 31568275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 131 - 268
Target Start/End: Original strand, 10887055 - 10887195
Alignment:
Q  131 catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaa-gctacatatttaatataaaaaacataagttccaagttaa 229  Q
    |||||||||  | ||||||||  |||||||| |||||||| ||| | ||||| ||||||| |||||||||||||||||||| ||| ||||||||| | ||    
T  10887055 catgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatttaatataaaatacacaagttccaaatcaa 10887154  T
Q  230 agttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    | |||| ||||||||||| |||  |||||||||||||||||    
T  10887155 aattaccactttaaacttcttaacatgtgcaaatttgcaca 10887195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 131 - 268
Target Start/End: Original strand, 6016882 - 6017022
Alignment:
Q  131 catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaa-gctacatatttaatataaaaaacataagttccaagttaa 229  Q
    |||| |||| || ||||||||  ||| ||||||||||||| ||||| |||||  |||||| | || ||||||||||| |||  || ||||||||||| ||    
T  6016882 catggtaagacatctaaaagtagtaacttttcattgaaaaacaacacttattttttaaaaagttatatatttaatatgaaatgcacaagttccaagtcaa 6016981  T
Q  230 agttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    |||||| |||||||||||||||  |||||||||||||||||    
T  6016982 agttaccactttaaactttttaacatgtgcaaatttgcaca 6017022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 142 - 252
Target Start/End: Complemental strand, 1017919 - 1017808
Alignment:
Q  142 aactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagct-acatatttaatataaaaaacataagttccaagttaaagttactactt 240  Q
    ||||||||||  ||| ||||| ||||||||||||||||||| |||||||  | |||||||||||||||||  || || || ||||| |||||||||||||    
T  1017919 aactaaaagtagtaacttttcgttgaaaaccaacaattatttattaaaaatttacatatttaatataaaatgcacaactttcaagtcaaagttactactt 1017820  T
Q  241 taaactttttaa 252  Q
    ||||||| ||||    
T  1017819 taaacttcttaa 1017808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 3850578 - 3850654
Alignment:
Q  131 catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatata 207  Q
    |||||||||||||||||||||   || ||||||||||||| ||| ||||||| |||||||| |||||||||||||||    
T  3850578 catgttaaggcaactaaaagtagcaacttttcattgaaaatcaataattattcattaaaagttacatatttaatata 3850654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 131 - 268
Target Start/End: Complemental strand, 18332840 - 18332700
Alignment:
Q  131 catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaa-gctacatatttaatataaaaaacataagttccaagttaa 229  Q
    |||||||||  | ||||||||  |||||||| |||||||| ||| | ||||| ||||||| |||| ||||||||||| |||  |||||||||||||| ||    
T  18332840 catgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctatatatttaatatgaaatgcataagttccaagtcaa 18332741  T
Q  230 agttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    | |||  ||||||||||| |||  ||||| |||||||||||    
T  18332740 aattatcactttaaacttcttaacatgtgaaaatttgcaca 18332700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 168 - 268
Target Start/End: Original strand, 17596404 - 17596507
Alignment:
Q  168 aaaccaacaattattgattaaaag-ctacatatttaatataaaaaacataagttccaagttaaagttactactttaaacttttta--atgtgcaaatttg 264  Q
    ||||||||||||| | |||||||  ||||||| |||||||||||  || ||||||||| | |||||||||||||||||||| |||  |||| ||||||||    
T  17596404 aaaccaacaattaattattaaaaatctacatagttaatataaaatgcacaagttccaaatcaaagttactactttaaacttcttatcatgtacaaatttg 17596503  T
Q  265 caca 268  Q
    ||||    
T  17596504 caca 17596507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 158 - 202
Target Start/End: Complemental strand, 32615584 - 32615540
Alignment:
Q  158 ttttcattgaaaaccaacaattattgattaaaagctacatattta 202  Q
    ||||||||||||| || ||||||||||||||||||||||||||||    
T  32615584 ttttcattgaaaatcatcaattattgattaaaagctacatattta 32615540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 196 - 268
Target Start/End: Original strand, 31503834 - 31503908
Alignment:
Q  196 atatttaatataaaaaacataagttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    ||||||||||||||| ||| |||||||||  |||| ||||||||||||| || |||  |||||||||||||||||    
T  31503834 atatttaatataaaatacacaagttccaatataaacttactactttaaatttcttaacatgtgcaaatttgcaca 31503908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 190
Target Start/End: Complemental strand, 26602596 - 26602523
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaa 190  Q
    ||||||||||||||  | |||||| ||||||||||  |||||||||| |||||||||||||||| | |||||||    
T  26602596 tgtgcaatattgcacatattaaggaaactaaaagtagtaatttttcactgaaaaccaacaattaattattaaaa 26602523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 119 - 210
Target Start/End: Complemental strand, 8977632 - 8977538
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgatt-aaaagctacatatttaatataaaa 210  Q
    ||||||||||||||  |||||||| ||||||||||   ||  ||| |||||||| ||||||| ||| ||| ||||| ||||||||||||||||||    
T  8977632 tgtgcaatattgcacatgttaaggaaactaaaagtagcaacctttaattgaaaaacaacaatcatttattgaaaagttacatatttaatataaaa 8977538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 34300422 - 34300472
Alignment:
Q  165 tgaaaaccaacaattattgatt-aaaagctacatatttaatataaaaaaca 214  Q
    |||||| ||| ||||||| ||| ||||||||||||||||||||||||||||    
T  34300422 tgaaaatcaataattatttatttaaaagctacatatttaatataaaaaaca 34300472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 268
Target Start/End: Original strand, 3853058 - 3853109
Alignment:
Q  219 ttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    |||||||| ||||||||||||||||| || |||  |||||||||||||||||    
T  3853058 ttccaagtcaaagttactactttaaatttcttaacatgtgcaaatttgcaca 3853109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 3e-42; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 119 - 268
Target Start/End: Complemental strand, 29190981 - 29190828
Alignment:
Q  119 tgtgcaatattgcat--gttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacata 216  Q
    |||||||||||||||  ||||||| ||||||||||  |||||||||||||||||||||||||||||||||||| | | |||||||||||| ||||||| |    
T  29190981 tgtgcaatattgcatatgttaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaatgttgcatatttaatattaaaaacaca 29190882  T
Q  217 agttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    |||||||||| |||||||||| ||||||||| |||  |||||||||||||||||    
T  29190881 agttccaagtcaaagttactaatttaaacttcttaacatgtgcaaatttgcaca 29190828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 120 - 247
Target Start/End: Original strand, 7349702 - 7349831
Alignment:
Q  120 gtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacataa 217  Q
    |||||||||||||  ||||||||||||||||||| |||| |||||||||||||||||||||||||  ||||||| |||||||||||||||||||||| ||    
T  7349702 gtgcaatattgcacatgttaaggcaactaaaagtaataacttttcattgaaaaccaacaattatttgttaaaagttacatatttaatataaaaaacacaa 7349801  T
Q  218 gttccaagttaaagttactactttaaactt 247  Q
    |||  |||| ||||||||||||||||||||    
T  7349802 gttttaagtcaaagttactactttaaactt 7349831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 119 - 268
Target Start/End: Original strand, 23553582 - 23553736
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttc-attgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacat 215  Q
    ||||||||||||||  |||||||| |||||||| |  ||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||| |     
T  23553582 tgtgcaatattgcacatgttaaggtaactaaaaatagtaatttttttattgaaaaccaacaattattgattaaaaactacatatttaatataaaaaatac 23553681  T
Q  216 aagttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    || ||  |||||||||||||||||||||||||||||  |||||||||||||||||    
T  23553682 aaattttaagttaaagttactactttaaactttttaacatgtgcaaatttgcaca 23553736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 121 - 268
Target Start/End: Complemental strand, 36000103 - 35999959
Alignment:
Q  121 tgcaatattg--catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacataag 218  Q
    ||||||||||  |||||||||| ||||||||||  ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||        
T  36000103 tgcaatattgtacatgttaaggtaactaaaagtagtaactttttattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaaca---- 36000008  T
Q  219 ttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
       |||||||||||||||||||||||||| |||  |||||||||||||||||    
T  36000007 ---caagttaaagttactactttaaacttcttaacatgtgcaaatttgcaca 35999959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 136 - 268
Target Start/End: Complemental strand, 41415703 - 41415569
Alignment:
Q  136 taaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaagttac 235  Q
    ||||||||||||||||  ||| |||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||| || || ||||| ||||||||    
T  41415703 taaggcaactaaaagtagtaacttttaattgaaaatcaacaattatttattaaaagctacatatttaatataaaaaacacaaatttcaagtcaaagttac 41415604  T
Q  236 tactttaaacttttta--atgtgcaaatttgcaca 268  Q
    |||||||||||| |||  |||||||||||||||||    
T  41415603 tactttaaacttattatcatgtgcaaatttgcaca 41415569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 145 - 268
Target Start/End: Original strand, 4329635 - 4329760
Alignment:
Q  145 taaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaagttactactttaaa 244  Q
    |||||||  |||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| || ||||| |||||||||||||||||    
T  4329635 taaaagtagtaatttttaattgaaaaccaacgattattgattaaaagttacatatttaatataaaaaacataaatttcaagtcaaagttactactttaaa 4329734  T
Q  245 cttttta--atgtgcaaatttgcaca 268  Q
    |||||||  || ||||||||||||||    
T  4329735 ctttttaacatatgcaaatttgcaca 4329760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 137 - 266
Target Start/End: Complemental strand, 48910947 - 48910816
Alignment:
Q  137 aaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaagttact 236  Q
    |||| ||||||||||  |||||||| ||||||||  ||||||||||||||||||||||||||||||| |||||||||| || |||| |||||||||||||    
T  48910947 aaggtaactaaaagtagtaattttttattgaaaattaacaattattgattaaaagctacatatttaacataaaaaacacaaattcctagttaaagttact 48910848  T
Q  237 actttaaacttttta--atgtgcaaatttgca 266  Q
    ||||||||||| |||  || ||||||||||||    
T  48910847 actttaaacttcttaacatatgcaaatttgca 48910816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 132 - 268
Target Start/End: Original strand, 53961350 - 53961488
Alignment:
Q  132 atgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaag 231  Q
    ||||||| | ||||||||||  ||||||||||||||||| |||||||||||| ||||| | |||||||||||||||||||||| || || ||||| |||     
T  53961350 atgttaaagtaactaaaagtagtaatttttcattgaaaatcaacaattattgtttaaatgttacatatttaatataaaaaacacaaatttcaagtcaaaa 53961449  T
Q  232 ttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    |||||| ||||||||| |||  |||||||||||||||||    
T  53961450 ttactaatttaaacttcttaacatgtgcaaatttgcaca 53961488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 142 - 268
Target Start/End: Complemental strand, 10389408 - 10389280
Alignment:
Q  142 aactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaagttactacttt 241  Q
    ||||||||||  ||| |||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||| |||| ||| |||||||||     
T  10389408 aactaaaagtattaacttttaattgaaaaccaacaattattgattaaaagttacatatttcatataaaaaacacaagttctaagtcaaaattactacttg 10389309  T
Q  242 aaacttttta--atgtgcaaatttgcaca 268  Q
    ||| ||||||  |||||||||||| ||||    
T  10389308 aaattttttaacatgtgcaaatttacaca 10389280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 121 - 247
Target Start/End: Complemental strand, 10813658 - 10813529
Alignment:
Q  121 tgcaatattgcat--gttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacata-tttaatataaaaaacataa 217  Q
    |||||||||||||  |||||||||||||||||| |||| |||| ||||||||||||||||||||  ||||||| |||||| |||||| ||||||||| ||    
T  10813658 tgcaatattgcatatgttaaggcaactaaaagtaataactttttattgaaaaccaacaattatttgttaaaagttacatattttaatttaaaaaacacaa 10813559  T
Q  218 gttccaagttaaagttactactttaaactt 247  Q
     ||  |||| ||||||||||||||||||||    
T  10813558 attttaagtcaaagttactactttaaactt 10813529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 131 - 268
Target Start/End: Complemental strand, 16667536 - 16667396
Alignment:
Q  131 catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaa-gctacatatttaatataaaaaacataagttccaagttaa 229  Q
    ||||||||| || ||||||||  ||||||||||||||||| ||||| ||||| ||||||| |||||||||||||||||||| ||| ||||| ||||||||    
T  16667536 catgttaagacatctaaaagtagtaatttttcattgaaaaacaacacttatttattaaaaagctacatatttaatataaaatacacaagtttcaagttaa 16667437  T
Q  230 agttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    | |||  | ||||||||| |||  |||||||||||||||||    
T  16667436 aattatcattttaaacttcttaacatgtgcaaatttgcaca 16667396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 131 - 268
Target Start/End: Complemental strand, 47327044 - 47326904
Alignment:
Q  131 catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaag-ctacatatttaatataaaaaacataagttccaagttaa 229  Q
    ||||||||| || ||||||||  ||||||||||||||||| ||| | ||||| |||||||  ||||||||||||||| |||  || ||||||||||| ||    
T  47327044 catgttaagacatctaaaagtagtaatttttcattgaaaaacaaaacttatttattaaaaaactacatatttaatatgaaatgcaaaagttccaagtcaa 47326945  T
Q  230 agttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    |||||| ||||||||||| |||  |||||||||||||||||    
T  47326944 agttaccactttaaacttcttaacatgtgcaaatttgcaca 47326904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 131 - 268
Target Start/End: Complemental strand, 47341840 - 47341700
Alignment:
Q  131 catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaag-ctacatatttaatataaaaaacataagttccaagttaa 229  Q
    ||||||||| || ||||||||  ||||||||||||||||| ||| | ||||| |||||||  ||||||||||||||| |||  || ||||||||||| ||    
T  47341840 catgttaagacatctaaaagtagtaatttttcattgaaaaacaaaacttatttattaaaaaactacatatttaatatgaaatgcaaaagttccaagtcaa 47341741  T
Q  230 agttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    |||||| ||||||||||| |||  |||||||||||||||||    
T  47341740 agttaccactttaaacttcttaacatgtgcaaatttgcaca 47341700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 174 - 268
Target Start/End: Complemental strand, 23051490 - 23051394
Alignment:
Q  174 acaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    ||||||||| |||||||| ||||||||| |||||||||||| ||||| ||||| ||||||||||||||||| || |||  |||||||||||||||||    
T  23051490 acaattatttattaaaagttacatattttatataaaaaacacaagtttcaagtcaaagttactactttaaatttcttatcatgtgcaaatttgcaca 23051394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 131 - 268
Target Start/End: Complemental strand, 54495789 - 54495649
Alignment:
Q  131 catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaa-gctacatatttaatataaaaaacataagttccaagttaa 229  Q
    |||||||||  | ||||||||  ||||||||  ||||||| ||| | ||||| ||||||| |||||||||||||||| |||  || ||||||||||||||    
T  54495789 catgttaagatatctaaaagtagtaatttttttttgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaatgcacaagttccaagttaa 54495690  T
Q  230 agttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    |||||| ||||||||||| |||  |||||||||||||||||    
T  54495689 agttaccactttaaacttcttaacatgtgcaaatttgcaca 54495649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 119 - 205
Target Start/End: Original strand, 49228369 - 49228457
Alignment:
Q  119 tgtgcaatattgcat--gttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaata 205  Q
    |||||||||||||||  ||||||| ||||||||||  ||| |||||||||||||||||||||| ||||||||| | |||||||||||||    
T  49228369 tgtgcaatattgcatatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattgttgattaaatgttacatatttaata 49228457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 144 - 268
Target Start/End: Original strand, 27362430 - 27362557
Alignment:
Q  144 ctaaaagtgataatttttcattgaaaaccaacaattattgattaaaa-gctacatatttaatataaaaaacataagttccaagttaaagttactacttta 242  Q
    ||||||||  |||||||| |||||||| ||| | ||||| || |||| |||||||||||||||| |||  || || |||||||| ||| |||| ||||||    
T  27362430 ctaaaagtagtaattttttattgaaaaacaaaacttatttatcaaaaagctacatatttaatatgaaatgcacaaattccaagtcaaaattaccacttta 27362529  T
Q  243 aacttttta--atgtgcaaatttgcaca 268  Q
    ||||| |||  |||||||||||||||||    
T  27362530 aacttcttaacatgtgcaaatttgcaca 27362557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 154 - 247
Target Start/End: Original strand, 39539513 - 39539607
Alignment:
Q  154 taatttttcattgaaaaccaacaattattgatt-aaaagctacatatttaatataaaaaacataagttccaagttaaagttactactttaaactt 247  Q
    ||||||||||||||||| ||||| ||||| ||| |||||||||||||||||||| |||  || ||||| ||||| | |||||| | |||||||||    
T  39539513 taatttttcattgaaaaacaacacttatttattaaaaagctacatatttaatatgaaattcacaagtttcaagtcatagttaccattttaaactt 39539607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 118 - 213
Target Start/End: Original strand, 49650222 - 49650319
Alignment:
Q  118 ctgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaac 213  Q
    |||||||||||||||  | |||||| |||||||||   ||| |||||||| ||||| |||||||||||| |||| | ||||| |||||||||||||||    
T  49650222 ctgtgcaatattgcacatattaaggtaactaaaagaagtaacttttcattaaaaacaaacaattattgaataaatgttacatgtttaatataaaaaac 49650319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 224
Target Start/End: Original strand, 2096883 - 2096991
Alignment:
Q  119 tgtgcaatattgcat--gttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgatt-aaaagctacatatttaatataaaaaacat 215  Q
    ||||||||||||||   |||||  ||||||||||||| || |||| |||||||| ||||||||||| ||| ||||| || |||||||||||||||  ||     
T  2096883 tgtgcaatattgcacaagttaaatcaactaaaagtgacaactttttattgaaaaacaacaattatttattaaaaagttatatatttaatataaaatgcac 2096982  T
Q  216 aagttccaa 224  Q
    |||||||||    
T  2096983 aagttccaa 2096991  T

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Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 268
Target Start/End: Complemental strand, 8736962 - 8736823
Alignment:
Q  131 catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaa-gctacatatttaatataaaaaacataagttccaagttaa 229  Q
    ||||||||| || ||||||||  |||||||| |||||||| ||| | ||||| ||||||| | |||||||||||||| |||  ||  |||||||||| ||    
T  8736962 catgttaagacatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagttacatatttaatatgaaatgca-cagttccaagtcaa 8736864  T
Q  230 agttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    |||||| |||||||| || |||  |||||||||||| ||||    
T  8736863 agttaccactttaaatttcttaacatgtgcaaatttacaca 8736823  T

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Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 204 - 268
Target Start/End: Original strand, 49228754 - 49228820
Alignment:
Q  204 tataaaaaacataagttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    ||||||||||| ||||||||||| |||||||||| ||||||||| |||  | |||||||||||||||    
T  49228754 tataaaaaacacaagttccaagtcaaagttactaatttaaacttcttaacacgtgcaaatttgcaca 49228820  T

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Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 268
Target Start/End: Original strand, 49181084 - 49181238
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgatt-aaaagctacatatttaatataaaaaacat 215  Q
    ||||||||||||||  |||||||| ||||||||||   ||  ||| |||||||| ||||||| ||| ||| ||||| ||||||||||||||||||  ||     
T  49181084 tgtgcaatattgcacatgttaaggaaactaaaagtagcaacctttaattgaaaaacaacaatcatttattgaaaagttacatatttaatataaaatgcac 49181183  T
Q  216 aagttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    ||||| |||   ||| |||||| ||| ||||| |||  | |||||||||||||||    
T  49181184 aagttacaatacaaatttactattttgaacttcttaacaggtgcaaatttgcaca 49181238  T

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Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 36971326 - 36971414
Alignment:
Q  157 tttttcattgaaaaccaacaattattgattaaaag-ctacatatttaatataaaaaacataagttccaagttaaagttactactttaaa 244  Q
    ||||| |||||||| ||||||  ||| ||| |||| |||||||||||||||||||   | ||||| |||| ||||||||||| ||||||    
T  36971326 ttttttattgaaaaacaacaaaaatttatttaaaggctacatatttaatataaaatgaacaagtttcaagataaagttactattttaaa 36971414  T

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Target: scaffold0155 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 131 - 268
Target Start/End: Complemental strand, 3565 - 3425
Alignment:
Q  131 catgttaaggcaactaaaagtgataa-tttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaa 229  Q
    |||||||| | ||||||||||  ||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  3565 catgttaatgtaactaaaagtagtaactttttcattaaaaaccaacaattattgattaaaagttacatatttaatataaaaaacataagttccaatttaa 3466  T
Q  230 agttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    ||| |||||||||||||| |||  |||||||||||| ||||    
T  3465 agtaactactttaaacttcttaatatgtgcaaatttacaca 3425  T

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Target: scaffold0727 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 119 - 268
Target Start/End: Original strand, 5703 - 5857
Alignment:
Q  119 tgtgcaatattgca--tgttaaggcaactaaaagtgataatttttc-attgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacat 215  Q
    ||||||||||||||  |||||||| |||||||| |  ||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||| |     
T  5703 tgtgcaatattgcacatgttaaggtaactaaaaatagtaatttttttattgaaaaccaacaattattgattaaaaactacatatttaatataaaaaatac 5802  T
Q  216 aagttccaagttaaagttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    || ||  |||||||||||||||||||||||||||||  |||||||||||||||||    
T  5803 aaattttaagttaaagttactactttaaactttttaacatgtgcaaatttgcaca 5857  T

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Target: scaffold0009 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 122 - 244
Target Start/End: Original strand, 43479 - 43602
Alignment:
Q  122 gcaatattgca--tgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacataagt 219  Q
    |||||||||||  |||||||| || |||||||  ||||||||||||||||| ||||||||||| |||||||| || ||||||||||||||||| ||||||    
T  43479 gcaatattgcacgtgttaaggtaa-taaaagtagtaatttttcattgaaaatcaacaattattaattaaaagttatatatttaatataaaaaatataagt 43577  T
Q  220 tccaagttaaagttactactttaaa 244  Q
    |  |||||||||||| | |||||||    
T  43578 tttaagttaaagttattgctttaaa 43602  T

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Target: scaffold0009; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 135 - 210
Target Start/End: Complemental strand, 191461 - 191386
Alignment:
Q  135 ttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaa 210  Q
    ||||| |||||||||||| ||||||||||||||||||   | |||||| |||||||  || |||||||||||||||    
T  191461 ttaagccaactaaaagtggtaatttttcattgaaaacatccgattatttattaaaaattatatatttaatataaaa 191386  T

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Target: scaffold0018 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 154 - 252
Target Start/End: Original strand, 182093 - 182190
Alignment:
Q  154 taatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacataagttccaagttaaagttactactttaaactttttaa 252  Q
    |||||||| ||||||||| |||||||||| |||||||| |||||||||||||||||||||| ||||| ||| | || | ||||||||||||||| ||||    
T  182093 taattttttattgaaaacaaacaattatttattaaaagttacatatttaatataaaaaacacaagtttcaaatcaacg-tactactttaaacttcttaa 182190  T

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Target: scaffold0111 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 131 - 268
Target Start/End: Complemental strand, 37266 - 37126
Alignment:
Q  131 catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaa-gctacatatttaatataaaaaacataagttccaagttaa 229  Q
    |||||||||  | ||||||||  |||||||| |||||||| ||| | ||||| ||||||| |||||||||||||||| |||  || ||||||||||| ||    
T  37266 catgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaatgcacaagttccaagtcaa 37167  T
Q  230 agttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    |||||  ||||||||||| |||  |||||||||||||||||    
T  37166 agttatcactttaaacttcttaacatgtgcaaatttgcaca 37126  T

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Target: scaffold0618 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 244
Target Start/End: Complemental strand, 8564 - 8452
Alignment:
Q  132 atgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgattaaaag-ctacatatttaatataaaaaacataagttccaagttaaa 230  Q
    |||||||  |||| ||||||  |||||||| ||||||||| |||||||||| |||||||  ||||| |||||||||||||  || |||||| || | |||    
T  8564 atgttaaaacaacgaaaagtattaattttttattgaaaac-aacaattatttattaaaaaactacaaatttaatataaaatgcacaagttctaaatcaaa 8466  T
Q  231 gttactactttaaa 244  Q
    ||||||||||||||    
T  8465 gttactactttaaa 8452  T

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Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 131 - 268
Target Start/End: Complemental strand, 94170 - 94030
Alignment:
Q  131 catgttaaggcaactaaaagtgataatttttcattgaaaaccaacaattattgatt-aaaagctacatatttaatataaaaaacataagttccaagttaa 229  Q
    ||||||||  |||||||||||  ||| |||| ||||||||| || ||||||| ||| |||| ||| |||||||||| ||||   |||||||||||  |||    
T  94170 catgttaaatcaactaaaagtagtaagtttttattgaaaactaataattatttattaaaaaactatatatttaatacaaaatgtataagttccaatgtaa 94071  T
Q  230 agttactactttaaacttttta--atgtgcaaatttgcaca 268  Q
    ||||| || || |||||| |||  || ||||||||||||||    
T  94070 agttagtatttaaaacttcttaacatatgcaaatttgcaca 94030  T

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