View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8159_high_5 (Length: 214)
Name: NF8159_high_5
Description: NF8159
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8159_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 34187099 - 34186904
Alignment:
| Q |
1 |
cgttggtctcagcataatttgcggtgttgttcgggggtttatttgggcattcatactggaaatgtccaaactcatggcaataataacactccactgctgc |
100 |
Q |
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| T |
34187099 |
cgttggtctcaacataatttgcggtgttgttcaggggtttatttgggcattcatactggaaatgtccaaactcatggcaataataacactccactgctgc |
34187000 |
T |
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| Q |
101 |
ctttcctcctctacctcctctgccgcttcctcgagtagctccacctcgaaagccacctcttccgcggctacggccagcacttgtctcatcttgagt |
196 |
Q |
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||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34186999 |
ctttcctcctctacctcctttgcctcttcctcgagtagctccacctcgaaagccacctcttccgcggctacggccagcacttgtctcatcttgagt |
34186904 |
T |
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