View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8159_low_8 (Length: 239)

Name: NF8159_low_8
Description: NF8159
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8159_low_8
NF8159_low_8
[»] chr5 (46 HSPs)
chr5 (14-113)||(5204924-5205022)
chr5 (14-113)||(40756848-40756946)
chr5 (14-113)||(4429422-4429520)
chr5 (127-224)||(36389927-36390027)
chr5 (14-113)||(5140974-5141072)
chr5 (22-113)||(23690814-23690904)
chr5 (14-113)||(39939371-39939469)
chr5 (14-83)||(27876242-27876310)
chr5 (35-113)||(2021684-2021762)
chr5 (35-113)||(5512999-5513077)
chr5 (35-113)||(7080124-7080202)
chr5 (35-113)||(34901979-34902057)
chr5 (42-116)||(43393088-43393162)
chr5 (14-117)||(40340426-40340529)
chr5 (58-113)||(4039820-4039875)
chr5 (34-113)||(21605651-21605730)
chr5 (35-113)||(28332123-28332202)
chr5 (26-113)||(40524388-40524475)
chr5 (35-113)||(6560829-6560907)
chr5 (35-113)||(19189109-19189187)
chr5 (35-113)||(23408255-23408333)
chr5 (14-107)||(35162360-35162451)
chr5 (68-113)||(2011416-2011461)
chr5 (14-113)||(25684076-25684174)
chr5 (14-113)||(39541025-39541123)
chr5 (54-113)||(19238797-19238855)
chr5 (58-113)||(31587996-31588051)
chr5 (35-113)||(4366793-4366871)
chr5 (35-113)||(15725822-15725900)
chr5 (35-113)||(27116465-27116543)
chr5 (35-113)||(29996513-29996591)
chr5 (35-113)||(34302649-34302727)
chr5 (35-113)||(43237678-43237756)
chr5 (68-113)||(6335393-6335438)
chr5 (14-113)||(8068625-8068722)
chr5 (68-113)||(9499231-9499276)
chr5 (35-116)||(13090914-13090995)
chr5 (68-113)||(13593639-13593684)
chr5 (68-113)||(16602721-16602766)
chr5 (68-113)||(29666176-29666221)
chr5 (64-113)||(33145214-33145263)
chr5 (14-113)||(2148432-2148530)
chr5 (34-113)||(9910366-9910446)
chr5 (81-113)||(12362729-12362761)
chr5 (14-113)||(15725948-15726046)
chr5 (74-110)||(42534399-42534435)
[»] chr7 (47 HSPs)
chr7 (14-116)||(48460546-48460647)
chr7 (14-113)||(17833934-17834032)
chr7 (14-113)||(21919996-21920095)
chr7 (14-113)||(31759996-31760094)
chr7 (14-113)||(23182694-23182792)
chr7 (14-113)||(29689230-29689328)
chr7 (14-113)||(31743303-31743403)
chr7 (14-82)||(5215054-5215122)
chr7 (17-89)||(32670508-32670579)
chr7 (14-113)||(1343022-1343122)
chr7 (14-113)||(27130848-27130947)
chr7 (69-113)||(34363972-34364016)
chr7 (66-113)||(27569628-27569675)
chr7 (35-113)||(9682351-9682429)
chr7 (35-113)||(43750078-43750156)
chr7 (69-118)||(2088866-2088915)
chr7 (14-113)||(13806365-13806463)
chr7 (66-113)||(27800384-27800431)
chr7 (67-113)||(10209989-10210035)
chr7 (35-113)||(40941878-40941956)
chr7 (67-113)||(41311057-41311103)
chr7 (68-113)||(19345615-19345660)
chr7 (14-107)||(31311355-31311447)
chr7 (35-91)||(16200854-16200910)
chr7 (14-113)||(24505126-24505224)
chr7 (64-112)||(31482378-31482426)
chr7 (14-109)||(1583655-1583750)
chr7 (35-113)||(1806484-1806563)
chr7 (35-113)||(15715907-15715986)
chr7 (66-113)||(40379317-40379364)
chr7 (35-113)||(47369544-47369623)
chr7 (35-112)||(2290794-2290872)
chr7 (67-113)||(8648394-8648440)
chr7 (72-110)||(29272997-29273035)
chr7 (35-113)||(45857799-45857877)
chr7 (68-113)||(11640298-11640343)
chr7 (35-116)||(28326681-28326762)
chr7 (68-113)||(32822940-32822985)
chr7 (68-113)||(40331416-40331461)
chr7 (14-113)||(47219959-47220056)
chr7 (14-113)||(15090671-15090769)
chr7 (65-113)||(18990094-18990142)
chr7 (71-110)||(23574372-23574412)
chr7 (71-110)||(28501699-28501739)
chr7 (71-110)||(29982419-29982459)
chr7 (69-113)||(35923711-35923755)
chr7 (68-112)||(49079257-49079301)
[»] chr6 (27 HSPs)
chr6 (14-113)||(14506919-14507017)
chr6 (14-116)||(19473671-19473772)
chr6 (14-113)||(1705609-1705707)
chr6 (14-113)||(10965722-10965820)
chr6 (14-113)||(1339377-1339475)
chr6 (14-113)||(24248807-24248905)
chr6 (14-113)||(1371412-1371511)
chr6 (14-113)||(1379160-1379259)
chr6 (14-113)||(2994630-2994728)
chr6 (14-113)||(21181142-21181240)
chr6 (35-113)||(24159797-24159875)
chr6 (14-113)||(21293793-21293891)
chr6 (14-113)||(7344620-7344719)
chr6 (69-113)||(32871892-32871936)
chr6 (14-113)||(26315450-26315549)
chr6 (35-113)||(6975025-6975103)
chr6 (14-113)||(10888115-10888213)
chr6 (35-113)||(9661755-9661834)
chr6 (35-113)||(2258906-2258984)
chr6 (35-113)||(32834099-32834177)
chr6 (35-113)||(35037559-35037636)
chr6 (24-113)||(3954221-3954310)
chr6 (35-116)||(30020683-30020764)
chr6 (14-113)||(1338856-1338955)
chr6 (14-113)||(18870925-18871024)
chr6 (34-106)||(24487611-24487683)
chr6 (81-113)||(34196180-34196212)
[»] chr4 (55 HSPs)
chr4 (14-113)||(44957224-44957322)
chr4 (14-113)||(12756005-12756103)
chr4 (14-113)||(31296824-31296922)
chr4 (14-116)||(52405533-52405634)
chr4 (14-113)||(4490877-4490975)
chr4 (14-113)||(39103844-39103942)
chr4 (14-113)||(40438940-40439038)
chr4 (14-113)||(53973762-53973860)
chr4 (14-113)||(49286915-49287012)
chr4 (14-113)||(19526727-19526825)
chr4 (14-116)||(19594931-19595032)
chr4 (35-113)||(31975552-31975630)
chr4 (14-96)||(39953889-39953970)
chr4 (35-113)||(15060560-15060638)
chr4 (14-76)||(34927408-34927469)
chr4 (14-113)||(39380705-39380802)
chr4 (14-113)||(595577-595675)
chr4 (14-113)||(16601613-16601711)
chr4 (14-113)||(52940483-52940582)
chr4 (14-103)||(4695320-4695407)
chr4 (35-113)||(14802715-14802793)
chr4 (35-113)||(13548729-13548807)
chr4 (67-113)||(46688105-46688151)
chr4 (35-113)||(52324292-52324370)
chr4 (14-113)||(337439-337538)
chr4 (34-113)||(32737513-32737592)
chr4 (35-113)||(19842441-19842519)
chr4 (35-113)||(47302399-47302477)
chr4 (68-113)||(1792185-1792230)
chr4 (35-112)||(36592360-36592437)
chr4 (14-113)||(21514992-21515090)
chr4 (35-115)||(48262563-48262642)
chr4 (34-113)||(3690513-3690592)
chr4 (35-113)||(24980266-24980345)
chr4 (35-110)||(27538921-27538996)
chr4 (14-73)||(34584488-34584546)
chr4 (14-113)||(38961269-38961367)
chr4 (35-113)||(53936837-53936916)
chr4 (35-113)||(3716328-3716406)
chr4 (35-116)||(8256462-8256544)
chr4 (35-116)||(8269880-8269962)
chr4 (35-113)||(9858247-9858325)
chr4 (35-113)||(37992007-37992085)
chr4 (35-113)||(41759986-41760064)
chr4 (35-113)||(46216097-46216175)
chr4 (35-113)||(51436139-51436217)
chr4 (35-113)||(55224128-55224206)
chr4 (68-113)||(17370634-17370679)
chr4 (35-112)||(39162130-39162207)
chr4 (68-113)||(48207081-48207126)
chr4 (35-91)||(582794-582850)
chr4 (69-113)||(21424148-21424192)
chr4 (14-113)||(23639541-23639639)
chr4 (69-113)||(24566724-24566768)
chr4 (71-110)||(30839604-30839644)
[»] chr3 (48 HSPs)
chr3 (14-113)||(43903075-43903173)
chr3 (14-113)||(29698628-29698726)
chr3 (14-113)||(32122205-32122303)
chr3 (38-113)||(5639672-5639747)
chr3 (14-113)||(27525195-27525290)
chr3 (14-113)||(5532351-5532448)
chr3 (35-103)||(27102926-27102992)
chr3 (26-113)||(52058821-52058908)
chr3 (14-76)||(8353367-8353428)
chr3 (35-113)||(21289138-21289216)
chr3 (35-113)||(27647481-27647559)
chr3 (35-113)||(38296892-38296970)
chr3 (67-113)||(41982742-41982788)
chr3 (35-113)||(52776778-52776856)
chr3 (35-116)||(29347585-29347666)
chr3 (66-113)||(14998506-14998553)
chr3 (35-110)||(27082671-27082746)
chr3 (66-113)||(46936662-46936709)
chr3 (35-113)||(11140250-11140328)
chr3 (35-113)||(19547492-19547570)
chr3 (35-113)||(28718252-28718330)
chr3 (35-113)||(42067582-42067660)
chr3 (35-113)||(45633190-45633268)
chr3 (68-113)||(26001198-26001243)
chr3 (69-113)||(6728958-6729002)
chr3 (42-110)||(27079711-27079779)
chr3 (14-113)||(32719988-32720086)
chr3 (14-113)||(48389064-48389163)
chr3 (58-110)||(48795768-48795820)
chr3 (35-113)||(1129453-1129532)
chr3 (35-113)||(32636629-32636708)
chr3 (35-113)||(33830533-33830611)
chr3 (34-113)||(51996742-51996821)
chr3 (58-113)||(53516929-53516984)
chr3 (35-113)||(7671806-7671884)
chr3 (35-113)||(29786922-29787000)
chr3 (35-113)||(31479559-31479637)
chr3 (35-113)||(38785407-38785485)
chr3 (35-113)||(42364252-42364330)
chr3 (68-113)||(4521627-4521672)
chr3 (68-113)||(20199350-20199395)
chr3 (68-113)||(36790245-36790290)
chr3 (68-113)||(47175470-47175515)
chr3 (35-91)||(13756635-13756691)
chr3 (65-113)||(25592361-25592409)
chr3 (71-110)||(41901955-41901995)
chr3 (14-113)||(45927223-45927321)
chr3 (14-113)||(48925717-48925815)
[»] chr1 (55 HSPs)
chr1 (14-113)||(7435516-7435614)
chr1 (14-113)||(45650010-45650108)
chr1 (14-113)||(38207837-38207934)
chr1 (14-113)||(40054591-40054689)
chr1 (14-113)||(44808407-44808505)
chr1 (14-93)||(24594167-24594245)
chr1 (14-113)||(51991534-51991632)
chr1 (21-113)||(26424152-26424244)
chr1 (14-113)||(24451741-24451839)
chr1 (35-116)||(29878020-29878101)
chr1 (35-95)||(47601668-47601728)
chr1 (58-113)||(4155793-4155848)
chr1 (35-114)||(26102798-26102877)
chr1 (34-113)||(44978872-44978951)
chr1 (35-113)||(632973-633051)
chr1 (14-76)||(43916651-43916712)
chr1 (66-118)||(30547121-30547173)
chr1 (58-113)||(17644899-17644954)
chr1 (35-113)||(30263907-30263986)
chr1 (66-113)||(51369332-51369379)
chr1 (35-113)||(922167-922245)
chr1 (35-113)||(12227124-12227202)
chr1 (35-113)||(26011267-26011345)
chr1 (35-113)||(27295061-27295139)
chr1 (35-113)||(50631918-50631996)
chr1 (35-113)||(51781429-51781507)
chr1 (35-113)||(51984937-51985015)
chr1 (36-113)||(48616773-48616850)
chr1 (14-113)||(7426966-7427064)
chr1 (14-113)||(9223160-9223259)
chr1 (14-113)||(12837774-12837871)
chr1 (37-113)||(34256456-34256532)
chr1 (14-113)||(43224951-43225049)
chr1 (69-113)||(47209049-47209093)
chr1 (35-113)||(6526753-6526832)
chr1 (35-110)||(18641894-18641969)
chr1 (35-113)||(31075935-31076014)
chr1 (35-113)||(48977201-48977280)
chr1 (35-113)||(14077332-14077410)
chr1 (35-113)||(16482579-16482657)
chr1 (35-113)||(28493813-28493891)
chr1 (67-113)||(33081991-33082037)
chr1 (20-113)||(33985914-33986005)
chr1 (67-109)||(45317943-45317985)
chr1 (35-113)||(46368517-46368595)
chr1 (68-113)||(5360560-5360605)
chr1 (68-113)||(39085072-39085117)
chr1 (68-113)||(40868494-40868539)
chr1 (68-113)||(41568448-41568493)
chr1 (14-95)||(45318096-45318176)
chr1 (72-116)||(46234828-46234873)
chr1 (68-113)||(46281945-46281990)
chr1 (68-116)||(13216454-13216502)
chr1 (37-116)||(24511588-24511668)
chr1 (35-75)||(51161164-51161204)
[»] scaffold0131 (1 HSPs)
scaffold0131 (14-113)||(10672-10770)
[»] chr2 (45 HSPs)
chr2 (14-116)||(713654-713756)
chr2 (14-113)||(15362775-15362872)
chr2 (14-113)||(17809334-17809432)
chr2 (14-113)||(41555730-41555828)
chr2 (48-113)||(4786365-4786430)
chr2 (14-113)||(38600116-38600214)
chr2 (14-113)||(39089924-39090022)
chr2 (14-113)||(15334359-15334457)
chr2 (14-113)||(40288010-40288107)
chr2 (14-113)||(8362710-8362809)
chr2 (14-113)||(22622722-22622820)
chr2 (35-113)||(11088219-11088297)
chr2 (66-112)||(45690856-45690902)
chr2 (35-116)||(12182561-12182642)
chr2 (35-95)||(2859663-2859723)
chr2 (14-113)||(12002351-12002449)
chr2 (14-116)||(37989031-37989131)
chr2 (35-113)||(5615378-5615456)
chr2 (35-113)||(6884162-6884240)
chr2 (35-113)||(12547367-12547445)
chr2 (35-113)||(42641176-42641254)
chr2 (68-113)||(33429136-33429181)
chr2 (14-113)||(38073412-38073509)
chr2 (14-113)||(40533254-40533352)
chr2 (14-82)||(40810452-40810520)
chr2 (35-113)||(11598117-11598196)
chr2 (21-92)||(15426335-15426405)
chr2 (35-113)||(34091698-34091777)
chr2 (66-113)||(42046078-42046125)
chr2 (35-113)||(8334197-8334275)
chr2 (35-113)||(11813522-11813600)
chr2 (20-113)||(15206052-15206140)
chr2 (66-116)||(19268923-19268973)
chr2 (35-113)||(20212479-20212556)
chr2 (35-113)||(25332956-25333034)
chr2 (35-113)||(34665574-34665652)
chr2 (35-113)||(37782174-37782252)
chr2 (35-113)||(37909382-37909460)
chr2 (68-113)||(16718639-16718684)
chr2 (81-113)||(7467123-7467155)
chr2 (74-110)||(19636000-19636036)
chr2 (74-110)||(19834593-19834629)
chr2 (65-113)||(32499153-32499201)
chr2 (68-116)||(36428865-36428913)
chr2 (14-113)||(37725554-37725652)
[»] scaffold1844 (1 HSPs)
scaffold1844 (14-113)||(1119-1216)
[»] chr8 (41 HSPs)
chr8 (14-113)||(7885880-7885978)
chr8 (14-113)||(31893638-31893736)
chr8 (14-113)||(29107859-29107956)
chr8 (14-105)||(44578960-44579050)
chr8 (26-113)||(41899-41986)
chr8 (14-113)||(34047721-34047820)
chr8 (35-113)||(32887983-32888061)
chr8 (26-113)||(9509164-9509251)
chr8 (66-113)||(12801110-12801157)
chr8 (42-101)||(15259318-15259377)
chr8 (14-113)||(27970015-27970113)
chr8 (14-113)||(35754762-35754860)
chr8 (35-113)||(17838661-17838739)
chr8 (35-113)||(23870585-23870663)
chr8 (14-113)||(39721973-39722072)
chr8 (68-113)||(2880287-2880332)
chr8 (24-113)||(30777588-30777677)
chr8 (68-113)||(41674487-41674532)
chr8 (14-86)||(9712714-9712785)
chr8 (67-107)||(41423359-41423399)
chr8 (35-113)||(2261032-2261111)
chr8 (34-113)||(5215645-5215724)
chr8 (34-113)||(6800096-6800175)
chr8 (35-110)||(14498628-14498703)
chr8 (35-113)||(40267480-40267559)
chr8 (67-113)||(417682-417728)
chr8 (35-113)||(2273013-2273091)
chr8 (35-113)||(12633231-12633309)
chr8 (35-113)||(28090195-28090273)
chr8 (35-113)||(29773448-29773526)
chr8 (35-113)||(37511091-37511169)
chr8 (35-116)||(41720247-41720329)
chr8 (36-113)||(464141-464218)
chr8 (68-113)||(43331747-43331792)
chr8 (68-113)||(44309569-44309614)
chr8 (34-113)||(117812-117892)
chr8 (35-91)||(27847535-27847591)
chr8 (14-113)||(28897209-28897307)
chr8 (74-110)||(29039619-29039655)
chr8 (68-112)||(40972423-40972467)
chr8 (71-110)||(43460382-43460422)
[»] scaffold0009 (1 HSPs)
scaffold0009 (14-113)||(214143-214240)
[»] scaffold0072 (1 HSPs)
scaffold0072 (35-113)||(47900-47978)
[»] scaffold0045 (1 HSPs)
scaffold0045 (14-93)||(38003-38082)
[»] scaffold0005 (2 HSPs)
scaffold0005 (35-113)||(36934-37012)
scaffold0005 (14-116)||(271448-271548)
[»] scaffold0721 (1 HSPs)
scaffold0721 (42-113)||(6920-6991)
[»] scaffold0604 (1 HSPs)
scaffold0604 (58-113)||(2023-2078)
[»] scaffold0067 (1 HSPs)
scaffold0067 (68-114)||(41390-41436)
[»] scaffold0001 (1 HSPs)
scaffold0001 (81-113)||(404688-404720)
[»] scaffold0060 (1 HSPs)
scaffold0060 (35-113)||(45764-45843)
[»] scaffold0113 (1 HSPs)
scaffold0113 (35-116)||(29245-29326)
[»] scaffold0625 (1 HSPs)
scaffold0625 (65-113)||(6618-6666)
[»] scaffold0022 (1 HSPs)
scaffold0022 (14-113)||(166723-166821)


Alignment Details
Target: chr5 (Bit Score: 84; Significance: 5e-40; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 5204924 - 5205022
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  5204924 aaaacaattctttttcttcg-aaaaaacaactcgtttcaatatgaatttgatgatttggtgtaccggtacactcaaatttttgagtgtaccatagaattt 5205022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 40756848 - 40756946
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  40756848 aaaacaattctttttcttcg-aaaaaacaactcgtttcaatatgaatttgatgatttggtgtaccggtacactcaaatttttgagtgtaccatagaattt 40756946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 4429520 - 4429422
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  4429520 aaaacaattctttttcttcg-aaaaaacaactcgtttcaatatgaatttgatgatttggtataccggtacactcaaatttttgagtgtaccatagaattt 4429422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 127 - 224
Target Start/End: Original strand, 36389927 - 36390027
Alignment:
Q  127 catatgttatggcatgaaagtgaaaccgtggtacttgttaat---aagtggttacatggtagatttaaccctaaagactagacatggagtatgataagag 223  Q
    ||||||||||||||||||||||||||||||||||||||||||   |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  36389927 catatgttatggcatgaaagtgaaaccgtggtacttgttaataataagtggttacatggaagatttaaccctaaagactaggcatggagtatgataagag 36390026  T
Q  224 t 224  Q
    |    
T  36390027 t 36390027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 5140974 - 5141072
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||||||||| || | |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||    
T  5140974 aaaacaattctttttatttg-aaaaaacaactcgtttcaatatgaatttgatgatttggtgtaccggtacactcaaatttttgagtgtgccatataattt 5141072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 113
Target Start/End: Original strand, 23690814 - 23690904
Alignment:
Q  22 tctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||| | |||||||||| ||| |||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||    
T  23690814 tctttttcttcg-ataaaacaactcgttttaatatgaatttgataatttggtgtaccggtacactcaaattttttagtgtaccatagaattt 23690904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 39939371 - 39939469
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||||||  ||| |||||||| ||||||||| |||||||| |||||||||| |||||||||||||||||||| || |||||| |||||    
T  39939371 aaaacaattctttttcttca-aaagaacaactcgtttcaatataaatttgataatttggtgtaccggtacactcaaatttttgaatgcaccataaaattt 39939469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 27876242 - 27876310
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtac 83  Q
    |||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||||||||| ||||||    
T  27876242 aaaacaattctttttcttcg-aaaaaataactcgtttcaatatgaatttgatgatttggtgtaccggtac 27876310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 2021762 - 2021684
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||| | ||  ||||| |  ||||||||||||||||||||||||| |||| ||||||||||||||||    
T  2021762 aaaaaacaactcatttgattaataatttaacaatttggtgtatcggtacactcaaatatttgggtgtaccatagaattt 2021684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 5512999 - 5513077
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||| | ||  ||||| |  |||| |||||||||||||||||||| |||||||||||||||||||||    
T  5512999 aaaaaacaactcatttgattaataatttaacaatttagtgtatcggtacactcaaatatttgagtgtaccatagaattt 5513077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 7080202 - 7080124
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||| | ||  ||||| |  ||||||||||||||||||||||||| ||||| |||||||||||||||    
T  7080202 aaaaaacaactcatttaattaataatttaacaatttggtgtatcggtacactcaaatatttgaatgtaccatagaattt 7080124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 34901979 - 34902057
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||| | ||  ||||| |  ||||||||||||||||||||||||| |||| ||||||||||||||||    
T  34901979 aaaaaacaactcatttgattaataatttaacaatttggtgtatcggtacactcaaatgtttgggtgtaccatagaattt 34902057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 43393088 - 43393162
Alignment:
Q  42 aactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaatttacc 116  Q
    ||||||||| | ||| | ||| || |||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  43393088 aactcatttaattattattttaataatttggtgtaccggtacactcaaatttttgagtgtaccatataatttacc 43393162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 40340529 - 40340426
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaattt-ttgagtgtaccatagaatt 112  Q
    |||| |||| |||||||||  |||||||||||||||| | ||| ||||| |||| |||||||| || ||||| ||||||| ||| |||||||||||||||    
T  40340529 aaaataattatttttcttcaaaaaaaacaactcattt-attattaattttatgacttggtgtaacgatacacccaaatttattgggtgtaccatagaatt 40340431  T
Q  113 taccg 117  Q
    |||||    
T  40340430 taccg 40340426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 113
Target Start/End: Original strand, 4039820 - 4039875
Alignment:
Q  58 aatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||| ||||||||||||| |||||||||||||||||| | ||||| |||||||||    
T  4039820 aatttaatgatttggtgtaccggtacactcaaatttttaaatgtactatagaattt 4039875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 21605730 - 21605651
Alignment:
Q  34 taaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||| ||||||||| | ||| ||||| | ||||||||||| |  |||||||||||| ||| ||||||||||||||||    
T  21605730 taaaaaataactcatttaactattaatttaaagatttggtgtaccaatacactcaaattgttgggtgtaccatagaattt 21605651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 28332202 - 28332123
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaat-ttttgagtgtaccatagaattt 113  Q
    |||||| ||| ||||| | ||| |||||| |||||||||||| |  ||||||||||| ||||||||||||||||||||||    
T  28332202 aaaaaataacacatttaactattaatttgttgatttggtgtaccaatacactcaaattttttgagtgtaccatagaattt 28332123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 113
Target Start/End: Original strand, 40524388 - 40524475
Alignment:
Q  26 tttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||  |||||| ||||||||| | ||  ||||| |  ||||| ||||||||||||||||||| ||||| |||||||||||||||    
T  40524388 tttcttcaaaaaaaataactcatttgattaacaatttaacaatttgatgtatcggtacactcaaatatttgaatgtaccatagaattt 40524475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 6560907 - 6560829
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||||||||| | ||| ||||| | ||||||||||| |  |||||||||||| ||| ||||||||||||||||    
T  6560907 aaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattattgggtgtaccatagaattt 6560829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 19189187 - 19189109
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||| || ||| | ||| ||||| || |||| ||||| ||||||||||||||| ||| ||||||||||||||||    
T  19189187 aaaaaacaattcgtttaattattaatttaataatttagtgtaccggtacactcaaattgttgggtgtaccatagaattt 19189109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 23408333 - 23408255
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||| |||   ||| ||||| || |||||||||| ||||||||||||||| ||| |||||||||| |||||    
T  23408333 aaaaaacaactcgtttacttattaatttaataatttggtgtaccggtacactcaaattgttgggtgtaccatataattt 23408255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 107
Target Start/End: Complemental strand, 35162451 - 35162360
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccata 107  Q
    |||| |||| |||||||||  |||||| ||||||||| | ||| ||||| | ||||||||||| | ||||||| ||||||||| ||||||||||    
T  35162451 aaaataattatttttcttc--aaaaaaaaactcatttaattattaatttaaagatttggtgtaccagtacacttaaatttttgggtgtaccata 35162360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 2011416 - 2011461
Alignment:
Q  68 tttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||| ||||||||||||| | ||||||||||||||||||||    
T  2011416 tttggtgtaccggtacactcaaaatgttgagtgtaccatagaattt 2011461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 25684174 - 25684076
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaattt-ttgagtgtaccatagaatt 112  Q
    |||| |||| |||||||||  |||||||||||||||| | ||| ||||| | ||||||||||| || ||||| ||||||| ||| |||||||||||||||    
T  25684174 aaaataattatttttcttca-aaaaaacaactcattt-attattaattttacgatttggtgtaccgatacacccaaatttattgggtgtaccatagaatt 25684077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 39541025 - 39541123
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaattt-ttgagtgtaccatagaatt 112  Q
    |||| |||| |||||||||  |||||||||||||||| | ||| ||||| |||||||||||||||| ||||  ||||||| ||| |||||| ||||||||    
T  39541025 aaaataattatttttcttca-aaaaaacaactcattt-attattaattttatgatttggtgtatcgatacatccaaatttattgggtgtacaatagaatt 39541122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 113
Target Start/End: Complemental strand, 19238855 - 19238797
Alignment:
Q  54 tatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||| ||| ||||||||| ||||||||||||| | ||| ||||||||||||||||    
T  19238855 tatgaatttaatg-tttggtgtaccggtacactcaaaatgttgggtgtaccatagaattt 19238797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 113
Target Start/End: Complemental strand, 31588051 - 31587996
Alignment:
Q  58 aatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||| || |||||||||| | ||||||||||||||||  ||||||||||||||||    
T  31588051 aatttaataatttggtgtaccagtacactcaaatttttaggtgtaccatagaattt 31587996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 4366871 - 4366793
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||||| |||| | ||| ||||| | ||||||||||| |||| ||||||||| | |  ||||||||||||||||    
T  4366871 aaaaaacaacttatttaattattaatttaacgatttggtgtaccggtgcactcaaatgtataggtgtaccatagaattt 4366793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 15725822 - 15725900
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||| ||||| | ||| ||||| | ||||||||||| ||| ||||||||||| |||| | ||||||| |||||    
T  15725822 aaaaaacaacccatttaattattaatttaaagatttggtgtaccggaacactcaaattgttgaatttaccataaaattt 15725900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 27116543 - 27116465
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||| ||||| | ||| |||||| ||||| |||||| |  |||||||||||||||| |||||||||| |||||    
T  27116543 aaaaaataacacatttaactattaatttgttgattgggtgtaccaatacactcaaatttttgggtgtaccataaaattt 27116465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 29996591 - 29996513
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||| | |||  |||| | |||||| |||| || |||||||| |||||||  |||||||||||||||    
T  29996591 aaaaaacaactcatttaattattgatttaacgatttgatgtaacgatacactcatatttttggatgtaccatagaattt 29996513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 34302727 - 34302649
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||||||||| | ||| ||||| | |||||| |||| |  |||||||||||| ||| ||||||||||||||||    
T  34302727 aaaaaataactcatttaactattaatttaaggatttgatgtaccaatacactcaaattattgggtgtaccatagaattt 34302649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 43237678 - 43237756
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||||||||| | ||| ||||| |  |||||||||| |  |||||||||||| ||| ||||||||||||||||    
T  43237678 aaaaaataactcatttaactattaatttaagaatttggtgtaccaatacactcaaattattgggtgtaccatagaattt 43237756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 6335438 - 6335393
Alignment:
Q  68 tttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||| ||||||||||||| | ||| ||||||||||||||||    
T  6335438 tttggtgtaccggtacactcaaaatgttgggtgtaccatagaattt 6335393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 8068625 - 8068722
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaattt-ttgagtgtaccatagaatt 112  Q
    |||| |||| |||||||||  |||||| |||||||| || ||| ||||| |||| |||||||| || ||||| ||||||| ||| |||||||||||||||    
T  8068625 aaaataattatttttcttc--aaaaaataactcatt-cattattaattttatgacttggtgtaacgatacacccaaatttattgggtgtaccatagaatt 8068721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 9499276 - 9499231
Alignment:
Q  68 tttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| || ||||||||||||| | ||||||||||||||||||||    
T  9499276 tttggtataccggtacactcaaaatgttgagtgtaccatagaattt 9499231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 13090995 - 13090914
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaatttacc 116  Q
    |||||| ||| ||||| | ||| ||||| || |||||||||| |  |||||||| || |||| |||||||||||||||||||    
T  13090995 aaaaaataacacatttaactattaatttaataatttggtgtaccaatacactcatatctttgggtgtaccatagaatttacc 13090914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 13593639 - 13593684
Alignment:
Q  68 tttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||||||||||||||||| | ||  ||||||||||||||||    
T  13593639 tttggtgtatcggtacactcaaaatgttaggtgtaccatagaattt 13593684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 16602721 - 16602766
Alignment:
Q  68 tttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||| ||||||||||||| | ||| ||||||||||||||||    
T  16602721 tttggtgtaccggtacactcaaaatgttgggtgtaccatagaattt 16602766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 29666176 - 29666221
Alignment:
Q  68 tttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||| ||||||||||||| | | ||||||||||||||||||    
T  29666176 tttggtgtaccggtacactcaaaatatcgagtgtaccatagaattt 29666221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 113
Target Start/End: Original strand, 33145214 - 33145263
Alignment:
Q  64 atgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||||||| |  |||||||| ||||||| ||||||||||||||||    
T  33145214 atgatttggtgtaccaatacactcatatttttgggtgtaccatagaattt 33145263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 2148432 - 2148530
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaattt-ttgagtgtaccatagaatt 112  Q
    |||| |||| |||||||||  |||||||||||||||| | ||| ||||| |||| |||||||| || ||||| ||||||| ||| |||||||| ||||||    
T  2148432 aaaataattatttttcttca-aaaaaacaactcattt-attattaattttatgacttggtgtaccgatacacccaaatttattgggtgtaccaaagaatt 2148529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 9910366 - 9910446
Alignment:
Q  34 taaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaat-ttttgagtgtaccatagaattt 113  Q
    ||||||||||||||||| | ||||||||| | || |  ||||| |||||||||||||| |  || ||||||||||||||||    
T  9910366 taaaaaacaactcatttaactatgaatttaaagagtgagtgtaccggtacactcaaatatagtgggtgtaccatagaattt 9910446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 113
Target Start/End: Original strand, 12362729 - 12362761
Alignment:
Q  81 tacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||||||||||||||||||||||||||    
T  12362729 tacacttaaatttttgagtgtaccatagaattt 12362761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 15726046 - 15725948
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaattt-ttgagtgtaccatagaatt 112  Q
    |||| |||| |||||||||  |||||||||||||||| | ||| ||||| | || ||||||||||| ||||| ||||||| ||| |||||||||| ||||    
T  15726046 aaaataattatttttcttca-aaaaaacaactcattt-attattaattttacgacttggtgtatcgatacacccaaatttattgggtgtaccataaaatt 15725949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 42534435 - 42534399
Alignment:
Q  74 gtatcggtacactcaaatttttgagtgtaccatagaa 110  Q
    ||||||||||||||||| || ||||||||||||||||    
T  42534435 gtatcggtacactcaaaattgtgagtgtaccatagaa 42534399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 2e-39; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 14 - 116
Target Start/End: Original strand, 48460546 - 48460647
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  48460546 aaaacaattctttttcttcg-aaaaaacaactcgtttcaatataaatttgatgatttggtgtaccggtacactcaaatttttgagtgtaccatagaattt 48460644  T
Q  114 acc 116  Q
    |||    
T  48460645 acc 48460647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 17834032 - 17833934
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  17834032 aaaacaattctttttcttcg-aaaaaacaactcgtttcaatatgaatttgatgatttggtgtgccggtacactcaaatttttgagtgtaccatagaattt 17833934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 21919996 - 21920095
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||| |||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  21919996 aaaacgattctttttcttcgaaaaaaacaactcgtttcaatataaatttgatgatttggtgtaccggtacactcaaatttttgagtgtaccatagaattt 21920095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 31760094 - 31759996
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||||||  |||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  31760094 aaaacaattctttttcttca-aaaaaacaacccgtttcaatatgaatttgatgatttggtgtaccggtacactcaaatttttgagtgtaccataaaattt 31759996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 23182694 - 23182792
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||| |||||| ||||||||||    
T  23182694 aaaacaattctttttctttg-aaaaaacaactcgtttcaatatgaatttgatgatttggtgtaccggaacactcaaattttttagtgtagcatagaattt 23182792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 29689230 - 29689328
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||| |||||||||  |||||||||||| |||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||    
T  29689230 aaaacaattatttttcttca-aaaaaacaactcgtttcaatatgaatttgataatttggtgtaccagtacactcaaatttttgagtgtaccatagaattt 29689328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 31743403 - 31743303
Alignment:
Q  14 aaaacaattctttttcttcgtaaa-aaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaatt 112  Q
    ||||||||| |||||||||  ||| ||||||||| ||| ||||| ||||||||||||||||| |  ||||||||||||||||||||||||||||||||||    
T  31743403 aaaacaattatttttcttcaaaaagaaacaactcgttttaatattaatttgatgatttggtgcactggtacactcaaatttttgagtgtaccatagaatt 31743304  T
Q  113 t 113  Q
    |    
T  31743303 t 31743303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 5215122 - 5215054
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggta 82  Q
    |||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||| |||||    
T  5215122 aaaacaattctttttcttcgaaaaaaacaacccgtttcaatatgaatttgatgatttggtgtaccggta 5215054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 32670508 - 32670579
Alignment:
Q  17 acaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaa 89  Q
    ||||||| ||||||||| |||||||||||| ||||||||||||||| ||||||||||||| | ||||||||||    
T  32670508 acaattcattttcttcg-aaaaaacaactcgtttcaatatgaatttaatgatttggtgtacccgtacactcaa 32670579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 1343122 - 1343022
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaa-caactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaatt 112  Q
    ||||||||| |||||||||  |||||| |||||| ||| | |||  |||| || |||||||||| ||||||||||||||| ||| |||||||||||||||    
T  1343122 aaaacaattatttttcttcaaaaaaaaacaactcgtttaattattgatttaataatttggtgtaccggtacactcaaattgttgggtgtaccatagaatt 1343023  T
Q  113 t 113  Q
    |    
T  1343022 t 1343022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 27130848 - 27130947
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaattt-ttgagtgtaccatagaatt 112  Q
    |||| |||| |||||||||  |||||||||||||||| | ||| ||||| |||| |||||||| |||||||| ||||||| ||| |||||||||||||||    
T  27130848 aaaataattatttttcttcaaaaaaaacaactcattt-attattaattttatgacttggtgtaccggtacacccaaatttattgggtgtaccatagaatt 27130946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 34363972 - 34364016
Alignment:
Q  69 ttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  34363972 ttggtgtatcggtacactcaaacttttgagtgtaccatagaattt 34364016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 66 - 113
Target Start/End: Original strand, 27569628 - 27569675
Alignment:
Q  66 gatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||    
T  27569628 gatttggtgtaccggtacactcaaattttttagtgtaccatagaattt 27569675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 9682351 - 9682429
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||| ||||||||||| | ||| ||||| ||||||||||||| |||||||||||||||||||  || |||||| |||||    
T  9682351 aaaacacaactcatttaattattaatttaatgatttggtgtaccggtacactcaaatttttggatgcaccataaaattt 9682429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 43750156 - 43750078
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||| ||||| | ||| |||||| ||||| |||||| |  |||||||||||||||||||||||||||||||||    
T  43750156 aaaaaataacacatttaactattaatttgttgattgggtgtaccaatacactcaaatttttgagtgtaccatagaattt 43750078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 118
Target Start/End: Complemental strand, 2088915 - 2088866
Alignment:
Q  69 ttggtgtatcggtacactcaaatttttgagtgtaccatagaatttaccgg 118  Q
    ||||||||||| || |||||||||||||||||||||||||||||| ||||    
T  2088915 ttggtgtatcgatatactcaaatttttgagtgtaccatagaatttgccgg 2088866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 13806463 - 13806365
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||| | |||||||||  |||||||||||| ||| | ||| ||||| || |||||||||||||||| ||||||||| |||  ||||||||| |||||    
T  13806463 aaaacaaatatttttcttca-aaaaaacaactcgtttaattattaatttaataatttggtgtatcggtatactcaaattattggatgtaccatataattt 13806365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 113
Target Start/End: Original strand, 27800384 - 27800431
Alignment:
Q  66 gatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||||| |||||||||||||||||||  |||||||||||||||    
T  27800384 gatttggtgtaccggtacactcaaatttttggatgtaccatagaattt 27800431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 10210035 - 10209989
Alignment:
Q  67 atttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||| |||||||||||||| ||||| |||||||||||||||    
T  10210035 atttggtgtaccggtacactcaaatatttgaatgtaccatagaattt 10209989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 40941956 - 40941878
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||||||||| | ||| ||||| | ||||| ||||| |  |||||||||||| ||||||||||||||||||||    
T  40941956 aaaaaataactcatttaactattaatttaaagattttgtgtaccaatacactcaaattgttgagtgtaccatagaattt 40941878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 41311103 - 41311057
Alignment:
Q  67 atttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||| ||||||||||||| | ||||||||||||||||||||    
T  41311103 atttggtgtaccggtacactcaaaatgttgagtgtaccatagaattt 41311057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 19345660 - 19345615
Alignment:
Q  68 tttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||||||||||| ||||| | ||||||||||||||||||||    
T  19345660 tttggtgtatcggtacaatcaaaatattgagtgtaccatagaattt 19345615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 107
Target Start/End: Complemental strand, 31311447 - 31311355
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccata 107  Q
    |||| ||||||||||||||  |||||||||||||||| | ||| ||||| | |||||| ||||  |||||||||||| |||| | |||||||||    
T  31311447 aaaataattctttttcttca-aaaaaacaactcatttaattattaatttaacgatttgatgtagtggtacactcaaaattttaaatgtaccata 31311355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 91
Target Start/End: Original strand, 16200854 - 16200910
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaat 91  Q
    |||||||||||||||| ||||| ||||| || ||||||||||| | |||||||||||    
T  16200854 aaaaaacaactcatttaaatattaatttaattatttggtgtattgttacactcaaat 16200910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 24505224 - 24505126
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaattt-ttgagtgtaccatagaatt 112  Q
    |||| |||| |||||||||  |||||||||||||||| | ||| ||||| |||| |||||||| || ||||| ||||||| ||| |||||||||||||||    
T  24505224 aaaataattatttttcttca-aaaaaacaactcattt-attattaattttatgacttggtgtaccgatacacccaaatttattgggtgtaccatagaatt 24505127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 31482426 - 31482378
Alignment:
Q  64 atgatttggtgtatcggtacactcaaatttttgagtgtaccatagaatt 112  Q
    ||||||||||||| |  ||||||||||| ||||||||||||||||||||    
T  31482426 atgatttggtgtaccaatacactcaaatatttgagtgtaccatagaatt 31482378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 109
Target Start/End: Complemental strand, 1583750 - 1583655
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccataga 109  Q
    |||| |||||||||||||   ||||||||| | |||| | ||| ||||| |||||||||||||  | |||| ||||||||||| |||||| |||||    
T  1583750 aaaataattctttttcttaaaaaaaaacaatttatttaattattaatttaatgatttggtgtacagatacattcaaatttttgggtgtactataga 1583655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 1806563 - 1806484
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaat-ttttgagtgtaccatagaattt 113  Q
    ||||||||||| |||| | ||| ||||| | || | |||||| |||||||||||||| | ||||||||||||||||||||    
T  1806563 aaaaaacaacttatttaactattaatttaaagagtaggtgtaccggtacactcaaatatattgagtgtaccatagaattt 1806484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 15715986 - 15715907
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaat-ttttgagtgtaccatagaattt 113  Q
    |||||||||||||||| | ||||||||| | || | |||||| |||||||||||||| |  || ||||||||||||||||    
T  15715986 aaaaaacaactcatttaactatgaatttaaagagtgggtgtaccggtacactcaaatatagtgggtgtaccatagaattt 15715907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 113
Target Start/End: Original strand, 40379317 - 40379364
Alignment:
Q  66 gatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||||| |||||||||||||||||| ||| ||||||| |||||    
T  40379317 gatttggtgtaccggtacactcaaattttttagtataccataaaattt 40379364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 47369544 - 47369623
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaat-ttttgagtgtaccatagaattt 113  Q
    ||||||||||| |||| | ||||||||| | || |  |||||||||||||||||||| | ||| ||||||||||||||||    
T  47369544 aaaaaacaacttatttaactatgaatttaaagagtgagtgtatcggtacactcaaatatattgggtgtaccatagaattt 47369623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 112
Target Start/End: Complemental strand, 2290872 - 2290794
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaat-ttttgagtgtaccatagaatt 112  Q
    |||||||||||||||| | ||| ||||| |   ||||||||| |||||||||||||| | ||| |||||||||||||||    
T  2290872 aaaaaacaactcatttaactataaatttaagtgtttggtgtaccggtacactcaaatatgttgggtgtaccatagaatt 2290794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 8648394 - 8648440
Alignment:
Q  67 atttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||| ||||||||||||| | |||||||||||||| |||||    
T  8648394 atttggtgtaccggtacactcaaaatgttgagtgtaccatataattt 8648440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 110
Target Start/End: Complemental strand, 29273035 - 29272997
Alignment:
Q  72 gtgtatcggtacactcaaatttttgagtgtaccatagaa 110  Q
    ||||| ||||||||||||||||| |||||||||||||||    
T  29273035 gtgtaccggtacactcaaattttcgagtgtaccatagaa 29272997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 45857799 - 45857877
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||| ||||| | ||| ||||| ||||||||||||| |  |||||||| || |||| ||||||||||||||||    
T  45857799 aaaaaataacacatttaactattaatttaatgatttggtgtaccaatacactcatatctttgggtgtaccatagaattt 45857877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 11640343 - 11640298
Alignment:
Q  68 tttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||| ||||||||||||| | ||| ||||||||||||||||    
T  11640343 tttggtgtaccggtacactcaaaatgttgggtgtaccatagaattt 11640298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 28326762 - 28326681
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaatttacc 116  Q
    |||||| ||||||||| | ||| ||||| | ||||||||||| |  |||||||||||| |||  ||||| ||||||||||||    
T  28326762 aaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattattggatgtacgatagaatttacc 28326681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 32822985 - 32822940
Alignment:
Q  68 tttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||| |||||||||||||||||||  |||| ||||||||||    
T  32822985 tttggtgtaccggtacactcaaatttttggatgtatcatagaattt 32822940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 40331416 - 40331461
Alignment:
Q  68 tttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||| ||||||||||||| | |||||||||||||| |||||    
T  40331416 tttggtgtaccggtacactcaaaatgttgagtgtaccatataattt 40331461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 47220056 - 47219959
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaattt-ttgagtgtaccatagaatt 112  Q
    |||| |||| |||||||||  |||||| ||||||||| | ||| ||||| | ||||||||||| || ||||| ||||||| ||| |||||||||||||||    
T  47220056 aaaataattatttttcttc--aaaaaaaaactcattt-attattaattttacgatttggtgtaccgatacacccaaatttattgggtgtaccatagaatt 47219960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 15090769 - 15090671
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaattt-ttgagtgtaccatagaatt 112  Q
    |||| |||| |||||||||  |||||||||||||| | | ||| ||||| | ||||||||||| || ||||| ||||||| ||| |||||||||||||||    
T  15090769 aaaataattatttttcttca-aaaaaacaactcatgt-attattaattttacgatttggtgtaccgatacacccaaatttattgggtgtaccatagaatt 15090672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 113
Target Start/End: Complemental strand, 18990142 - 18990094
Alignment:
Q  65 tgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||| |  |||||||||||||||  ||||||||||||||||    
T  18990142 tgatttggtgtaccaatacactcaaattttttggtgtaccatagaattt 18990094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 110
Target Start/End: Complemental strand, 23574412 - 23574372
Alignment:
Q  71 ggtgtatcggtacactcaaattttt-gagtgtaccatagaa 110  Q
    |||||| |||||||||||||||||| |||||||||||||||    
T  23574412 ggtgtagcggtacactcaaatttttcgagtgtaccatagaa 23574372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 110
Target Start/End: Original strand, 28501699 - 28501739
Alignment:
Q  71 ggtgtatcggtacactcaaattttt-gagtgtaccatagaa 110  Q
    |||||| |||||||||||||||||| |||||||||||||||    
T  28501699 ggtgtagcggtacactcaaatttttcgagtgtaccatagaa 28501739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 110
Target Start/End: Original strand, 29982419 - 29982459
Alignment:
Q  71 ggtgtatcggtacactcaaattttt-gagtgtaccatagaa 110  Q
    |||| |||||||||||||||||||| |||||||||||||||    
T  29982419 ggtgcatcggtacactcaaatttttcgagtgtaccatagaa 29982459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 35923755 - 35923711
Alignment:
Q  69 ttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||| |||||||||||||| |||| ||||||||||| |||||    
T  35923755 ttggtgtttcggtacactcaaacttttaagtgtaccataaaattt 35923711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 112
Target Start/End: Complemental strand, 49079301 - 49079257
Alignment:
Q  68 tttggtgtatcggtacactcaaatttttgagtgtaccatagaatt 112  Q
    ||||||||| ||||||||||||| | ||| |||||||||||||||    
T  49079301 tttggtgtaccggtacactcaaaatgttgggtgtaccatagaatt 49079257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 1e-37; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 14507017 - 14506919
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  14507017 aaaacaattctttttcttcg-aaaaaacaactcgtttcaatatgaatttgatgatttggtgtaccggtacactcaaatttttcagtgtaccatagaattt 14506919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 19473772 - 19473671
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  19473772 aaaaaaattctttttcttcg-aaaaaacaactcgtttcaatatgaatttgatgatttggtgtaccggtacactcaaatttttgagtgtaccctagaattt 19473674  T
Q  114 acc 116  Q
    |||    
T  19473673 acc 19473671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 1705707 - 1705609
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  1705707 aaaacaattttttttcttcg-aaaaaacaactcgtttcaatatgaatttgatgatttggtgtaccgatacactcaaatttttgagtgtaccatagaattt 1705609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 10965820 - 10965722
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||| |||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10965820 aaaacaattttttttcttcg-aaaaaacaactcgttacaatatgaatttgatgatttggtgtatcggtacactcaaatttttaagtgtaccatagaattt 10965722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 1339475 - 1339377
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||||||  ||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  1339475 aaaacaattctttttcttca-aaagaacaactcgtttcaatattaatttgatgatttggtgtatcggtacactcaaatttttaagtgtaccatagaattt 1339377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 24248905 - 24248807
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||| |||||||||||||  |||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  24248905 aaaacgattctttttcttca-aaaaaacaactcgtttcaatataaatttgatgatttggtgtaccggtacactcaaatttttgagtgtaccatagaattt 24248807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 1371511 - 1371412
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||| |  || |||||||||||||||||||| |||||||||||    
T  1371511 aaaacaattctttttcttcgaaaaaaacaactcgtttcaataggaatttgatgatttggtgcactgggacactcaaatttttgagtgtgccatagaattt 1371412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 1379259 - 1379160
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||| |  || |||||||||||||||||||| |||||||||||    
T  1379259 aaaacaattctttttcttcgaaaaaaacaactcgtttcaataggaatttgatgatttggtgcactgggacactcaaatttttgagtgtgccatagaattt 1379160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 2994630 - 2994728
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||| || |||||||||| ||| ||||||||||||||||||    
T  2994630 aaaacaattctttttctttg-aaaaaacaactcgtttcaatatgaatttgatgatttggtgtaccgatacactcaaaatttggagtgtaccatagaattt 2994728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 21181240 - 21181142
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||| |||||||||| |||||||||||  ||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  21181240 aaaacaattatttttcttcg-aaaaaacaacttgtttcaatataaatttgatgatttggtgtaccgatacactcaaatttttgagtgtaccatagaattt 21181142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 24159797 - 24159875
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||| ||||||||| ||| ||||||||||||||| | |||||||||||||||| |||||||||||||||||    
T  24159797 aaaaaacaactcgtttcaatattaatgtgatgatttggtgtaccagtacactcaaattttttagtgtaccatagaattt 24159875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 21293891 - 21293793
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||||||  |||||||||||  | ||||||| ||||||||||||| || || |||||||||||||||||||| | |||||||||||||    
T  21293891 aaaacaattctttttcttca-aaaaaacaacttgtatcaatataaatttgatgatttagtataccggtacactcaaatttttgaatataccatagaattt 21293793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 7344620 - 7344719
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||| |||||||||  |||||||||||| ||| | |||  |||| || |||||||||| ||||||||||||||| ||| ||||||||||||||||    
T  7344620 aaaacaattatttttcttcaaaaaaaacaactcgtttaattatttatttaataatttggtgtaccggtacactcaaattgttgggtgtaccatagaattt 7344719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 32871936 - 32871892
Alignment:
Q  69 ttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  32871936 ttggtgtatcggtacactcaaacttttgagtgtaccatagaattt 32871892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 26315549 - 26315450
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||||||||||||  |||||||||||| ||| |  || ||||| || |||||||||| ||||||||||||||| |||  ||||||||| |||||    
T  26315549 aaaacagttctttttcttcaaaaaaaacaactcgtttaatcattaatttaataatttggtgtaccggtacactcaaattgttggatgtaccataaaattt 26315450  T

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Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 6975025 - 6975103
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||| | ||| ||||| |  ||||||| || ||| ||||||||||||||| ||||||||||||||||    
T  6975025 aaaaaacaactcatttaattattaatttaacaatttggtataccggcacactcaaatttttgggtgtaccatagaattt 6975103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 10888115 - 10888213
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||||||||||||| ||||||||||||| ||  | ||| ||||| || ||||| |||| | ||||||||||||| |||  ||||||||| |||||    
T  10888115 aaaacaattctttttcttc-taaaaaacaactcgttcaattattaatttaataatttgatgtaccagtacactcaaattgttggatgtaccatataattt 10888213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 9661834 - 9661755
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaat-ttttgagtgtaccatagaattt 113  Q
    |||||||||||||||| | ||| ||||| | || | |||||| |||||||||||||| | ||| ||||||||||||||||    
T  9661834 aaaaaacaactcatttaactattaatttaaagaatgggtgtaccggtacactcaaatatattgggtgtaccatagaattt 9661755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 2258984 - 2258906
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||||||||| | ||| ||||| | ||||| ||||| |  |||||||||||| ||| ||||||||||||||||    
T  2258984 aaaaaataactcatttaactattaatttaaggatttagtgtaccaatacactcaaattgttgggtgtaccatagaattt 2258906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 32834099 - 32834177
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||||||||  | ||| ||||| ||||||||||||| |  |||||||||||| ||  ||||||||||||||||    
T  32834099 aaaaaataactcattgaactattaatttaatgatttggtgtaccaatacactcaaattattaggtgtaccatagaattt 32834177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 35037636 - 35037559
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||| | ||| ||||| |  ||||| |||||| || ||||||| || ||||||||||||||||||||    
T  35037636 aaaaaacaactcatttaactattaatttaagtatttgttgtatcagtgcactcaa-ttattgagtgtaccatagaattt 35037559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 113
Target Start/End: Original strand, 3954221 - 3954310
Alignment:
Q  24 tttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||  ||||||||||| |||| | ||| ||||| ||| |||||||||  |||||||||||| | ||   |||||||||||||||    
T  3954221 tttttcttcaaaaaaaacaactaatttaattattaatttaatgctttggtgtactggtacactcaaaatgttagatgtaccatagaattt 3954310  T

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Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 116
Target Start/End: Original strand, 30020683 - 30020764
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaatttacc 116  Q
    |||||| ||| ||||| | ||| |||||  ||||||||| ||||  |||||||||| |||||  ||||||||||||||||||    
T  30020683 aaaaaataacacatttaactattaatttattgatttggtatatcaatacactcaaacttttggatgtaccatagaatttacc 30020764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 1338955 - 1338856
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaattt-ttgagtgtaccatagaatt 112  Q
    |||| |||| |||||| ||  |||||||||||||||| | ||| ||||| |||| |||||||| || ||||| ||||||| |||  ||||||||||||||    
T  1338955 aaaataattatttttcatcaaaaaaaacaactcattt-attattaattttatgacttggtgtaccgatacacccaaatttattggatgtaccatagaatt 1338857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 18871024 - 18870925
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaattt-ttgagtgtaccatagaatt 112  Q
    |||| |||| |||||| ||  |||||||||||||||| | ||| ||||| |||| |||||||| || ||||| ||||||| |||  ||||||||||||||    
T  18871024 aaaataattatttttcatcaaaaaaaacaactcattt-attattaattttatgacttggtgtaccgatacacccaaatttattggatgtaccatagaatt 18870926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 106
Target Start/End: Original strand, 24487611 - 24487683
Alignment:
Q  34 taaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccat 106  Q
    ||||||| ||||||||| | ||| ||||| | ||||||||||| |  |||||||||||| ||| |||||||||    
T  24487611 taaaaaataactcatttaactattaatttaaagatttggtgtaccaatacactcaaattgttgggtgtaccat 24487683  T

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Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 113
Target Start/End: Original strand, 34196180 - 34196212
Alignment:
Q  81 tacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||||||||||||||||||||| |||||    
T  34196180 tacactcaaatttttgagtgtaccataaaattt 34196212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 1e-37; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 44957224 - 44957322
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  44957224 aaaacaattctttttcttcg-aaaaaacaactcgtttcaatatgaatttgatgatttggtgtaccgatacactcaaatttttgagtgtaccatagaattt 44957322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 12756103 - 12756005
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  12756103 aaaaaaattctttttcttcg-aaaaaacaactcgtttcaatatgaatttgatgatttggtgtaccgatacactcaaatttttgagtgtaccatagaattt 12756005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 31296824 - 31296922
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||    
T  31296824 aaaacaattctttttcttcg-aaaaaacaactcgtttcaatatgaatttgatgatttagtgtaccggtacactcaaattttttagtgtaccatagaattt 31296922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 52405634 - 52405533
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||| ||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  52405634 aaaaaaattctttttcttcg-aaaaaacaactcgttttaatatgaatttgatgatttggtgtaccggtacactcaaatttttgagtgtaccctagaattt 52405536  T
Q  114 acc 116  Q
    |||    
T  52405535 acc 52405533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 4490975 - 4490877
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||    
T  4490975 aaaacaattctttttcttcg-aaaaaacaactcgttttaatatgaatttgatgatttggtgtactggtacactcaaatttttgagtgtactatagaattt 4490877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 39103844 - 39103942
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||| |||||||||||||| |||||||||||| ||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  39103844 aaaacgattctttttcttcg-aaaaaacaactcgtttcaatataaatttgatgatttagtgtaccggtacactcaaatttttgagtgtaccatagaattt 39103942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 40438940 - 40439038
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||| |||||||||||||  |||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  40438940 aaaacgattctttttcttca-aaaaaacaactcgtttcaatatgaatttaatgatttggtgtaccggtacactcaaatttttgagtgtaccatagaattt 40439038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 53973762 - 53973860
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||| |||||||||||||| |||||||||||| ||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  53973762 aaaacgattctttttcttcg-aaaaaacaactcgtttcaatataaatttgatgatttagtgtaccggtacactcaaatttttgagtgtaccatagaattt 53973860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 49286915 - 49287012
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||||||||||||||  ||||||||||| ||| ||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||| |||||    
T  49286915 aaaacaattctttttcttcg--aaaaacaactcgttttaatatgaatttgatgattttgtgtaccggtacactcaaattattgagtgtaccataaaattt 49287012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 19526825 - 19526727
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||||| |||| |||||  | |||||| ||||||||||||||||||||||||||    
T  19526825 aaaacaattctttttcttcg-aaaaaacaactcattttaatatgaatttgataatttagtgtacggatacacttaaatttttgagtgtaccatagaattt 19526727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 19595032 - 19594931
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||| |||||||||| ||||||||| || ||||||||||||||| ||||||| |||||   |||||||||||||||| |||||||||||||||||    
T  19595032 aaaacaattatttttcttcg-aaaaaacaattcgtttcaatatgaatttaatgattttgtgtacaagtacactcaaatttttaagtgtaccatagaattt 19594934  T
Q  114 acc 116  Q
    |||    
T  19594933 acc 19594931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 31975630 - 31975552
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||| ||| ||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||    
T  31975630 aaaaaacaactcgttttaatatgaatttgatgatttggtgtaccggtacattcaaatttttaagtgtaccatagaattt 31975552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 39953889 - 39953970
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttg 96  Q
    |||||||||||||||||||| |||||| || |  ||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  39953889 aaaacaattctttttcttcg-aaaaaataatttgtttcaatatgaatttgatgatttggtgtaccggtacattcaaatttttg 39953970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 15060638 - 15060560
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||| ||||||||| || || ||||||||||||| |||| |||||||||| |||| |||||||||||||||    
T  15060638 aaaaaacaactcgtttcaatattaaattaatgatttggtgtaccggtgcactcaaattcttgaatgtaccatagaattt 15060560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 34927408 - 34927469
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgta 76  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||    
T  34927408 aaaacaattctttttcttcg-aaaaaacaactcgtttcaatatgaatttgatgatttagtgta 34927469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 39380705 - 39380802
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||| |||||||||||||   |||||| ||||||||| | | | ||||| ||||||||||||| ||||||||| |||||||||| |||||||||||||||    
T  39380705 aaaataattctttttctta--aaaaaaaaactcatttaattgttaatttaatgatttggtgtaccggtacacttaaatttttgaatgtaccatagaattt 39380802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 595577 - 595675
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||||||| ||||||||| |   |||||||| ||||| || |||| ||| | ||||||||||||| ||||||||||| ||||||||||    
T  595577 aaaacaattctttttcttcg-aaaaaacaattgccttcaatattaatttaataatttagtgcaccggtacactcaaacttttgagtgtatcatagaattt 595675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 16601711 - 16601613
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||| ||||||||||||||  |||| ||||||||||| | ||| ||||| | ||||||||||| |||||||||||||||||| | |||||| ||||||||    
T  16601711 aaaataattctttttcttca-aaaatacaactcatttaattattaatttaacgatttggtgtaccggtacactcaaattttttattgtaccgtagaattt 16601613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 52940582 - 52940483
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||| |||||||||  |||||||||||| ||| | ||| ||||| || |||||||| | ||||||||||||||| |||  |||||||||||||||    
T  52940582 aaaacaattatttttcttcaaaaaaaacaactcgtttaattattaatttaataatttggtgcaccggtacactcaaattgttggatgtaccatagaattt 52940483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 103
Target Start/End: Complemental strand, 4695407 - 4695320
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtac 103  Q
    ||||||||| |||||||||  |||||||||||| ||||||||| || || ||||||||||||| |||| ||||||| || ||||||||||    
T  4695407 aaaacaattatttttcttc--aaaaaacaactcgtttcaatattaaattaatgatttggtgtaccggtgcactcaagttcttgagtgtac 4695320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 14802793 - 14802715
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||||||||| | ||| ||||| | |||||||||||||  |||||||||||| ||||||||||||||||||||    
T  14802793 aaaaaataactcatttaactattaatttaaggatttggtgtatcaatacactcaaattgttgagtgtaccatagaattt 14802715  T

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Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 13548729 - 13548807
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||| ||||||||||| | ||| ||||| ||||||||||||| |||||||||||||||||||  || |||||| |||||    
T  13548729 aaaacacaactcatttaattattaatttaatgatttggtgtaccggtacactcaaatttttggatgcaccataaaattt 13548807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 46688151 - 46688105
Alignment:
Q  67 atttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||    
T  46688151 atttggtgtaccggtacactcaaatttttgagtgtaccattgaattt 46688105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 52324292 - 52324370
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||||| |||| ||||| ||||| ||| ||||||||| ||||||||||||| | ||| |||||||||| |||||    
T  52324292 aaaaaacaactaatttaaatattaatttaatgctttggtgtaccggtacactcaaaatgttgggtgtaccataaaattt 52324370  T

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Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 337439 - 337538
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||| ||||||||||||||  |||||| ||||||||| |   | ||||| | ||||||||||| ||| ||||||||| |||||  |||||||||||||||    
T  337439 aaaataattctttttcttcaaaaaaaaaaactcatttaatggtcaatttaacgatttggtgtaccggcacactcaaaattttggatgtaccatagaattt 337538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 32737513 - 32737592
Alignment:
Q  34 taaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||| |||||| | ||| ||| | |  |||||||| | ||||||||||||||| ||||||||||||||||||||    
T  32737513 taaaaaacaattcatttaactattaatataaatatttggtgcaccggtacactcaaattattgagtgtaccatagaattt 32737592  T

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Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 19842519 - 19842441
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||||||||| | ||| ||||| |  ||||||||||  ||||||||||||||||||  |||||||||||||||    
T  19842519 aaaaaaaaactcatttaattattaatttaacaatttggtgtactggtacactcaaatttttggatgtaccatagaattt 19842441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 47302477 - 47302399
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||| ||||| | ||| |||||| ||||| |||||| |  ||||||||||||||||||||||||||| |||||    
T  47302477 aaaaaataacacatttaactattaatttgttgattgggtgtaccaatacactcaaatttttgagtgtaccataaaattt 47302399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 1792185 - 1792230
Alignment:
Q  68 tttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||| ||||||||||||| | ||||||||||||||||||||    
T  1792185 tttggtgtaccggtacactcaaaatattgagtgtaccatagaattt 1792230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 112
Target Start/End: Original strand, 36592360 - 36592437
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaatt 112  Q
    |||||| ||||||||| | ||| ||||| | ||||||||||| |  |||||||||||||||| |||||||||| ||||    
T  36592360 aaaaaataactcatttaactattaatttaaggatttggtgtaacaatacactcaaatttttgggtgtaccataaaatt 36592437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 21515090 - 21514992
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaattt-ttgagtgtaccatagaatt 112  Q
    |||| |||| |||||||||  |||||||||||||||| | ||| ||||| | ||||||||||| || ||||| ||||||| ||| |||||||||||||||    
T  21515090 aaaataattatttttcttca-aaaaaacaactcattt-attattaattttacgatttggtgtaccgatacacccaaatttattgggtgtaccatagaatt 21514993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 115
Target Start/End: Complemental strand, 48262642 - 48262563
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaatttac 115  Q
    |||||| |||| |||| | ||| ||||| ||| ||||||||| || |||||||||| |||| |||||||||||||||||||    
T  48262642 aaaaaataactaatttaattattaatttaatg-tttggtgtaccgatacactcaaaattttaagtgtaccatagaatttac 48262563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 3690592 - 3690513
Alignment:
Q  34 taaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||| |||| |  || ||||  ||| ||||||||| || |||||||||| | ||||||||||||||||||||    
T  3690592 taaaaaacaactaatttaatcattaattaaatgttttggtgtaccgatacactcaaaatgttgagtgtaccatagaattt 3690513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 24980266 - 24980345
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaat-ttttgagtgtaccatagaattt 113  Q
    |||||||||||| ||| | ||| ||||| | || | ||||||||||||||||||||| | ||| ||||||||||||||||    
T  24980266 aaaaaacaactcttttaactattaatttaaagagtgggtgtatcggtacactcaaatatattgggtgtaccatagaattt 24980345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 27538996 - 27538921
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaa 110  Q
    |||||| ||||||||| | ||| ||||| | ||||||||||| |  |||||||||||| ||| |||||||||||||    
T  27538996 aaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaa 27538921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 73
Target Start/End: Original strand, 34584488 - 34584546
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggt 73  Q
    ||||||||| ||||||||   |||||||||||| ||||||||| ||||||||||||||||    
T  34584488 aaaacaattatttttcttta-aaaaaacaactcgtttcaatattaatttgatgatttggt 34584546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 38961269 - 38961367
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||| ||||||||||||||  |||||| ||||||||| |   | ||||| | ||||||||||| || |||| ||||| ||||| ||||||||||||||||    
T  38961269 aaaaaaattctttttcttcaaaaaaaa-aactcatttaatgtttaatttaacgatttggtgtaccgatacaatcaaaattttgggtgtaccatagaattt 38961367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 53936837 - 53936916
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaat-ttttgagtgtaccatagaattt 113  Q
    |||||||||||||||| | ||| ||||| | || | |||||| |||||||||||||| | ||| ||||||||||||||||    
T  53936837 aaaaaacaactcatttaactattaatttaaagaatgggtgtaccggtacactcaaatatattgggtgtaccatagaattt 53936916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 3716406 - 3716328
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||||||||| | ||| ||||| | ||||||||||| |  |||||||||||| |||  |||||||||||||||    
T  3716406 aaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattattggatgtaccatagaattt 3716328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 8256544 - 8256462
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttt-tgagtgtaccatagaatttacc 116  Q
    |||||||||||||||| | ||||||||| | || || |||||   |||||||||||| |  ||||||||||||||||||||||    
T  8256544 aaaaaacaactcatttaactatgaatttaaagagttagtgtactagtacactcaaatatagtgagtgtaccatagaatttacc 8256462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 8269962 - 8269880
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttt-tgagtgtaccatagaatttacc 116  Q
    |||||||||||||||| | ||||||||| | || || |||||   |||||||||||| |  ||||||||||||||||||||||    
T  8269962 aaaaaacaactcatttaactatgaatttaaagagttagtgtactagtacactcaaatatagtgagtgtaccatagaatttacc 8269880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 9858325 - 9858247
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||| ||||| | ||| ||||| |||||||||||||||  |||||||| || |||| |||||| |||||||||    
T  9858325 aaaaaataacacatttaactattaatttaatgatttggtgtatcaatacactcatatctttgggtgtactatagaattt 9858247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 37992007 - 37992085
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||||| |||| | ||| ||||| ||| |||| |||| ||||||||||||| | ||| |||||||||| |||||    
T  37992007 aaaaaacaactaatttaattattaatttaatgctttgatgtaccggtacactcaaaatgttgggtgtaccataaaattt 37992085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 41759986 - 41760064
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||||||||| | ||| ||||| | ||||||||||| |  |||||||||||| |||  |||||||||||||||    
T  41759986 aaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttggatgtaccatagaattt 41760064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 46216097 - 46216175
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||| ||||| | ||| |||||| ||||| |||||| |  |||||||||||||||| |||||| |||||||||    
T  46216097 aaaaaataacacatttaattattaatttgttgattgggtgtaccaatacactcaaatttttgggtgtacaatagaattt 46216175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 51436139 - 51436217
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||||||||| | ||| ||||| |  |||||||||| |  |||||||||||| ||| ||||||||||||||||    
T  51436139 aaaaaataactcatttaactattaatttaagaatttggtgtaccaatacactcaaattgttgggtgtaccatagaattt 51436217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 55224206 - 55224128
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||| |  || ||||| ||||||||||||| |||||||| | ||| |||   |||||||||||||||    
T  55224206 aaaaaacaactcatttaatcattaatttaatgatttggtgtaccggtacaccccaatatttagatgtaccatagaattt 55224128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 17370634 - 17370679
Alignment:
Q  68 tttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||| ||||||||||||| | ||| ||||||||||||||||    
T  17370634 tttggtgtaccggtacactcaaaatgttgggtgtaccatagaattt 17370679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 112
Target Start/End: Original strand, 39162130 - 39162207
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaatt 112  Q
    |||||| ||| ||||| | ||| |||||  ||| |||||||| |  ||||| ||||||||||||||||||||||||||    
T  39162130 aaaaaataacacatttaactattaatttattgacttggtgtaccaatacacccaaatttttgagtgtaccatagaatt 39162207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 48207126 - 48207081
Alignment:
Q  68 tttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||| ||||||||||||| | ||| ||||||||||||||||    
T  48207126 tttggtgtaccggtacactcaaaatgttgggtgtaccatagaattt 48207081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 91
Target Start/End: Complemental strand, 582850 - 582794
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaat 91  Q
    |||||||||||||||| | ||||||||| |||| |  ||||| ||||||||||||||    
T  582850 aaaaaacaactcatttaactatgaatttaatgagtgagtgtaccggtacactcaaat 582794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 21424192 - 21424148
Alignment:
Q  69 ttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||||||||||||| || ||||||||||| |||| |||||    
T  21424192 ttggtgtatcggtacactccaacttttgagtgtatcataaaattt 21424148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 23639541 - 23639639
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaattt-ttgagtgtaccatagaatt 112  Q
    |||| |||| |||||||||  |||||||||||||||| | ||| ||||| | || |||||||| || ||||||||||||| |||  ||||||||||||||    
T  23639541 aaaataattatttttcttca-aaaaaacaactcattt-attattaattttacgacttggtgtaccgatacactcaaatttattggatgtaccatagaatt 23639638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 24566724 - 24566768
Alignment:
Q  69 ttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||| | |||||||||||||||  ||||||||||||||||    
T  24566724 ttggtgtattgatacactcaaatttttaggtgtaccatagaattt 24566768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 110
Target Start/End: Original strand, 30839604 - 30839644
Alignment:
Q  71 ggtgtatcggtacactcaaattt-ttgagtgtaccatagaa 110  Q
    |||||| |||||||||||||||| |||||||||||||||||    
T  30839604 ggtgtaccggtacactcaaatttattgagtgtaccatagaa 30839644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 1e-37; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 43903173 - 43903075
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  43903173 aaaacaattctttttcttcg-aaaaaacaactcgtttcaatatgaatttgatgatttggtgtaccggtacactcaaatttttaagtgtaccatagaattt 43903075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 29698628 - 29698726
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||| | |||||||||||||    
T  29698628 aaaacaattctttttcttcg-aaaaaacaactcgtttcaatatgaattagatgatttggtgtaccggtacactcaaatttttgaatataccatagaattt 29698726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 32122205 - 32122303
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||    
T  32122205 aaaacaattctttttcttcg-aaaaaacaactcgtttcaatataaatttgatgatttagtgtaccggtacacttaaatttttgagtgtaccatagaattt 32122303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 113
Target Start/End: Complemental strand, 5639747 - 5639672
Alignment:
Q  38 aaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||||||| | ||  ||||| |  ||||||||||||||||||||||||| |||||||||||||||||||||    
T  5639747 aaacaactcatttaattaataatttaacaatttggtgtatcggtacactcaaatatttgagtgtaccatagaattt 5639672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 27525290 - 27525195
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||| |||||||||  |||||||||||| ||||||||| || || |||||||||||||||||| |||||||    |||||||||||||| |||||    
T  27525290 aaaacaattatttttcttca-aaaaaacaactcgtttcaatattaaattaatgatttggtgtatcggtgcactcaa---gttgagtgtaccataaaattt 27525195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 5532351 - 5532448
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||| ||||||||||||||  |||||| |||||| || ||||| ||||| || |||||||||| |||||||||||||| |||   |||||||||||||||    
T  5532351 aaaataattctttttcttc--aaaaaaaaactcaattaaatattaatttaattatttggtgtaccggtacactcaaatatttagatgtaccatagaattt 5532448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 103
Target Start/End: Original strand, 27102926 - 27102992
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtac 103  Q
    |||||||||||| ||||||||| |||||||||| |||||||| ||||||||||||| ||||||||||||    
T  27102926 aaaaaacaactcgtttcaatattaatttgatga-ttggtgtaccggtacactcaaa-ttttgagtgtac 27102992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 113
Target Start/End: Original strand, 52058821 - 52058908
Alignment:
Q  26 tttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||  |||||| ||||||||| | ||  ||||| |  |||| |||||||||||||||||||| |||||||||||||||||||||    
T  52058821 tttcttcaaaaaaaataactcatttaattaataatttaacaatttagtgtatcggtacactcaaatatttgagtgtaccatagaattt 52058908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 8353367 - 8353428
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgta 76  Q
    |||||||||||||||||||| |||||||||||| ||||||||| ||||| ||||||| |||||    
T  8353367 aaaacaattctttttcttcg-aaaaaacaactcgtttcaatataaatttaatgattttgtgta 8353428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 21289138 - 21289216
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||| ||||| | ||| |||||| ||||| |||||| |  |||||||||||||||||||||||||||||||||    
T  21289138 aaaaaataacacatttaactattaatttgttgattgggtgtacctatacactcaaatttttgagtgtaccatagaattt 21289216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 27647559 - 27647481
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||| ||||| | ||| |||||| ||||| |||||| |  |||||||||||||||||||||||||||||||||    
T  27647559 aaaaaataacacatttaactattaatttgttgattgggtgtaccaatacactcaaatttttgagtgtaccatagaattt 27647481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 38296970 - 38296892
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||| | ||  ||||| |  ||||||||||||||||||||||||| |||  ||||||||||||||||    
T  38296970 aaaaaacaactcatttgattaataatttaacaatttggtgtatcggtacactcaaatatttaggtgtaccatagaattt 38296892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 41982742 - 41982788
Alignment:
Q  67 atttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||    
T  41982742 atttggtgtatcggtacactcaaatatttgagtgtaccataaaattt 41982788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 52776778 - 52776856
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||| ||| | ||| ||||| || |||||||||| ||||||||||||||| ||| |||||| |||||||||    
T  52776778 aaaaaacaactcgtttaattattaatttaataatttggtgtaccggtacactcaaattattgggtgtacgatagaattt 52776856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 116
Target Start/End: Original strand, 29347585 - 29347666
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaatttacc 116  Q
    |||||| ||||||||| | ||| ||||| | ||||||||||| |  |||||||||||| ||| |||||||||||||||||||    
T  29347585 aaaaaataactcatttaactattaatttaaagatttggtgtaccaatacactcaaattgttgggtgtaccatagaatttacc 29347666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 113
Target Start/End: Original strand, 14998506 - 14998553
Alignment:
Q  66 gatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||||| ||||||||||||||||||| |||||||||| |||||    
T  14998506 gatttggtgtaccggtacactcaaatttttgggtgtaccataaaattt 14998553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 27082671 - 27082746
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaa 110  Q
    |||||| ||||||||| | ||| ||||| | ||||||||||| |  |||||||||||| |||||||||||||||||    
T  27082671 aaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgagtgtaccatagaa 27082746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 113
Target Start/End: Complemental strand, 46936709 - 46936662
Alignment:
Q  66 gatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||||| ||||||||||||||||||  ||||||||||||||||    
T  46936709 gatttggtgtaccggtacactcaaattttttggtgtaccatagaattt 46936662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 11140328 - 11140250
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||||||||| | ||| ||||| | ||||||||||| |  |||||||||||| ||| ||||||||||||||||    
T  11140328 aaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattattgggtgtaccatagaattt 11140250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 19547570 - 19547492
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||| ||||| | ||| |||||| ||||| |||||| || ||||||||||||||||  |||||||||||||||    
T  19547570 aaaaaataacacatttaactattaatttgttgattgggtgtaccgatacactcaaatttttggatgtaccatagaattt 19547492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 28718252 - 28718330
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||||| |||| | ||| ||||| | | ||||||| | ||||||||||||| ||||| ||||||||||||||||    
T  28718252 aaaaaacaactaatttaattattaatttaaaggtttggtgcaccggtacactcaaaattttgggtgtaccatagaattt 28718330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 42067660 - 42067582
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||||||||| | ||| ||||| | ||||||||||| |  |||||||||||| ||| ||||||||||||||||    
T  42067660 aaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaattt 42067582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 45633268 - 45633190
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||| | ||  ||||| |  ||||| ||||||||||||||||||| ||||||||||| ||| |||||    
T  45633268 aaaaaacaactcatttaattaataatttaacaatttgatgtatcggtacactcaaatatttgagtgtactataaaattt 45633190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 26001243 - 26001198
Alignment:
Q  68 tttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||| ||||||||||||| | ||||||||||||||||||||    
T  26001243 tttggtgtaccggtacactcaaaatattgagtgtaccatagaattt 26001198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 6728958 - 6729002
Alignment:
Q  69 ttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||||||||| |||||  |||||||||||||||    
T  6728958 ttggtgtatcggtacactcaaacttttggatgtaccatagaattt 6729002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 27079711 - 27079779
Alignment:
Q  42 aactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaa 110  Q
    ||||||||| | ||| ||||| | ||||||||||| |  |||||||||||| |||||||||||||||||    
T  27079711 aactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgagtgtaccatagaa 27079779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 32720086 - 32719988
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaattt-ttgagtgtaccatagaatt 112  Q
    |||| |||| ||||||||| ||||||||||||||||| | ||| ||||| | || |||||||| || ||||| ||||||| ||| |||||||||||||||    
T  32720086 aaaataattatttttcttc-taaaaaacaactcattt-attattaattttacgacttggtgtaccgatacacccaaatttattgggtgtaccatagaatt 32719989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 48389064 - 48389163
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaattt-ttgagtgtaccatagaatt 112  Q
    |||| |||| |||||||||  |||||||||||||||| | ||| ||||| | || ||||||||||| ||||  ||||||| ||| |||||||||||||||    
T  48389064 aaaataattatttttcttcaaaaaaaacaactcattt-attattaattttacgacttggtgtatcgatacatccaaatttattgggtgtaccatagaatt 48389162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 48795768 - 48795820
Alignment:
Q  58 aatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaa 110  Q
    ||||| ||||||||||||| ||||||||| ||||||||  |||||||||||||    
T  48795768 aatttaatgatttggtgtaccggtacacttaaatttttaggtgtaccatagaa 48795820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 1129453 - 1129532
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaat-ttttgagtgtaccatagaattt 113  Q
    ||||||||||| |||| | ||| ||||| | || | |||||| |||||||||||||| | ||||||||||||||||||||    
T  1129453 aaaaaacaacttatttaactattaatttaaagagtgggtgtaccggtacactcaaatgtattgagtgtaccatagaattt 1129532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 32636708 - 32636629
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaat-ttttgagtgtaccatagaattt 113  Q
    |||||||||||||||| | ||| ||||| | || |  |||||||||||||||||||| | ||| ||||||||||||||||    
T  32636708 aaaaaacaactcatttaactattaatttaaggagtgagtgtatcggtacactcaaatatattgggtgtaccatagaattt 32636629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 33830611 - 33830533
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaattt-ttgagtgtaccatagaattt 113  Q
    |||||||||||||||| | ||| ||||| |||| |||||||| || ||||| ||||||| ||| ||||||||||||||||    
T  33830611 aaaaaacaactcattt-attattaattttatgacttggtgtaccgatacacccaaatttattgggtgtaccatagaattt 33830533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 51996742 - 51996821
Alignment:
Q  34 taaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||| |||| | ||| ||||| ||| |||| ||||  |||||||||||| | ||| ||||||||||||||||    
T  51996742 taaaaaacaactaatttaattattaatttaatgctttgatgtactggtacactcaaaatgttgggtgtaccatagaattt 51996821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 113
Target Start/End: Original strand, 53516929 - 53516984
Alignment:
Q  58 aatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||||| |||||| |  ||||||||||||||| |||||||||||||||||    
T  53516929 aatttgttgattgggtgtaccaatacactcaaatttttaagtgtaccatagaattt 53516984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 7671884 - 7671806
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||| ||||| | ||| |||||| | ||| |||||| |  |||||||||||||||| ||||||||||||||||    
T  7671884 aaaaaataacacatttaactattaatttgtttattgggtgtaccaatacactcaaatttttgggtgtaccatagaattt 7671806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 29786922 - 29787000
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||||||||| | ||| ||||| |  |||||||||| |  |||||||||||| ||| ||||||||||||||||    
T  29786922 aaaaaataactcatttaactattaatttaagaatttggtgtaccaatacactcaaattgttgggtgtaccatagaattt 29787000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 31479637 - 31479559
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||||||||| | ||| ||||| |  |||||||||| || |||||||||||||||  |||||||||| |||||    
T  31479637 aaaaaaaaactcatttaattattaatttaacaatttggtgtaccgatacactcaaatttttaggtgtaccatataattt 31479559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 38785407 - 38785485
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||||||||| | ||| ||||| | ||||||||||| |  |||||||||||| ||| |||||||||| |||||    
T  38785407 aaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattattgggtgtaccatataattt 38785485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 42364252 - 42364330
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| |||| |||| | ||| ||||| | ||||||||||| |  |||||||||||| ||| ||||||||||||||||    
T  42364252 aaaaaataacttatttaactattaatttaaggatttggtgtaccaatacactcaaattattgggtgtaccatagaattt 42364330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 4521627 - 4521672
Alignment:
Q  68 tttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||| ||||||||||||| | ||| ||||||||||||||||    
T  4521627 tttggtgtaccggtacactcaaaatgttgggtgtaccatagaattt 4521672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 20199395 - 20199350
Alignment:
Q  68 tttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||| ||||||||||| | | ||||||||||||||||||||    
T  20199395 tttggtgtaccggtacactcacaatgttgagtgtaccatagaattt 20199350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 36790245 - 36790290
Alignment:
Q  68 tttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||| || |||||||||| | ||||||||||||||||||||    
T  36790245 tttggtgtaccgatacactcaaaatgttgagtgtaccatagaattt 36790290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 47175515 - 47175470
Alignment:
Q  68 tttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||| ||||||||||||| | ||| ||||||||||||||||    
T  47175515 tttggtgtaccggtacactcaaaatgttgggtgtaccatagaattt 47175470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 91
Target Start/End: Original strand, 13756635 - 13756691
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaat 91  Q
    |||||||||||||||| | ||||||||| | || |  ||||||||||||||||||||    
T  13756635 aaaaaacaactcatttaactatgaatttaaagagtgagtgtatcggtacactcaaat 13756691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 113
Target Start/End: Original strand, 25592361 - 25592409
Alignment:
Q  65 tgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||||||||  ||||||||||||||||  ||||||||| |||||    
T  25592361 tgatttggtgtatcaatacactcaaatttttggatgtaccatataattt 25592409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 110
Target Start/End: Complemental strand, 41901995 - 41901955
Alignment:
Q  71 ggtgtatcggtacactcaaattttt-gagtgtaccatagaa 110  Q
    |||||| |||||||||||||||||| |||||||||||||||    
T  41901995 ggtgtagcggtacactcaaatttttcgagtgtaccatagaa 41901955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 45927321 - 45927223
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaattt-ttgagtgtaccatagaatt 112  Q
    |||| |||| |||||||||  |||||||||||||||| | ||| ||||| | ||||||||||| || ||||| ||||||| ||| |||||||||| ||||    
T  45927321 aaaataattatttttcttca-aaaaaacaactcattt-attattaattttacgatttggtgtaccgatacacccaaatttattgggtgtaccataaaatt 45927224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 48925717 - 48925815
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaattt-ttgagtgtaccatagaatt 112  Q
    |||| |||| |||||||||  |||||||||||||||| | ||| ||||| | || |||||||| || |||| |||||||| ||| |||||||||||||||    
T  48925717 aaaataattatttttcttca-aaaaaacaactcattt-attattaattttacgacttggtgtaccgatacattcaaatttattgggtgtaccatagaatt 48925814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 1e-37; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 7435614 - 7435516
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  7435614 aaaacaattctttttcttcg-aaaaaacaactcgtttcaatataaatttgatgatttggtgtaccggtacactcaaatttttgagtgtaccatagaattt 7435516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 45650108 - 45650010
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||||||| |||||| ||||| ||||||||| ||||||||||||||||||| |||||||||||||||||| | |||||||||||||||    
T  45650108 aaaacaattctttttcttcg-aaaaaataactcgtttcaatataaatttgatgatttggtgtaccggtacactcaaattttttaatgtaccatagaattt 45650010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 38207837 - 38207934
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||||| |  ||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||| |||||    
T  38207837 aaaacaattctttttctttg--aaaaacaactcgtttcaatatgaatttgatgatttggtgtaccgatacactcaaatttttgagcgtaccatataattt 38207934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 40054689 - 40054591
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||| ||||||||||||||| |||||||||||| ||||||||| ||||| ||||||| ||||| ||||| ||||| |||||||| |||||||||||||||    
T  40054689 aaaataattctttttcttcg-aaaaaacaactcgtttcaatataaatttaatgattttgtgtaccggtatactcagatttttgaatgtaccatagaattt 40054591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 44808505 - 44808407
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||||||| |||||||||| | ||| ||||| |||||||| ||||||||||  |||||| | ||||||||||||||||||||||||||    
T  44808505 aaaacaattctttttcttcg-aaaaaacaacccgttttaatataaatttgataatttggtgtacgggtacatttaaatttttgagtgtaccatagaattt 44808407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 24594167 - 24594245
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaattt 93  Q
    |||| ||||||||||||| | |||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||    
T  24594167 aaaataattctttttctttg-aaaaaacaactcctttcaatataaatttgatgatttggtgtaccggtacactcaaattt 24594245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 51991632 - 51991534
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||||||| |||||||||||| |||  |||| |||||||| ||||||||||  | |||||| ||||||| ||||||||||||||||||    
T  51991632 aaaacaattctttttcttcg-aaaaaacaactcgttttgatataaatttgataatttggtgtacggatacacttaaattttggagtgtaccatagaattt 51991534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 113
Target Start/End: Original strand, 26424152 - 26424244
Alignment:
Q  21 ttctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||||||  |||||||||||||||| | ||| ||||| || |||| ||||| ||||||||||||||| |||||| |||||||||||||    
T  26424152 ttctttttcttcaaaaaaaacaactcatttaattattaatttaataatttagtgtaccggtacactcaaattgttgagtataccatagaattt 26424244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 24451839 - 24451741
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||| |||||||||||||| |||||| || |||  |||||||| |||||  | |||||||| | ||||||||||||||||||||||||||||||||||||    
T  24451839 aaaataattctttttcttcataaaaa-catctcgcttcaatattaatttagtaatttggtgcaccggtacactcaaatttttgagtgtaccatagaattt 24451741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 116
Target Start/End: Original strand, 29878020 - 29878101
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaatttacc 116  Q
    |||||||||||||||| | ||  ||||| |  ||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  29878020 aaaaaacaactcatttgattaataatttaacaatttggtgtatcggtacactcaaatatttgggtgtaccatagaatttacc 29878101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 47601728 - 47601668
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaattttt 95  Q
    ||||||||||| |||| | ||||||||| ||||||||||||| ||||||||||||||||||    
T  47601728 aaaaaacaacttatttaattatgaatttaatgatttggtgtaccggtacactcaaattttt 47601668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 58 - 113
Target Start/End: Complemental strand, 4155848 - 4155793
Alignment:
Q  58 aatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||| || |||| |||||||||||||||||||| |||||||||||||||||||||    
T  4155848 aatttaataatttagtgtatcggtacactcaaatatttgagtgtaccatagaattt 4155793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 26102798 - 26102877
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattta 114  Q
    |||||| ||||||||| | ||| ||||| | |||||||||||||  |||||| ||||| |||||||||||||||||||||    
T  26102798 aaaaaataactcatttaactattaatttaaggatttggtgtatcaatacacttaaattattgagtgtaccatagaattta 26102877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 44978951 - 44978872
Alignment:
Q  34 taaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||| ||||| ||| | ||| ||||| || |||||||||| ||||||||||||||| ||| ||||||||||||||||    
T  44978951 taaaaaaaaactcgtttaattattaatttaataatttggtgtaccggtacactcaaattgttgggtgtaccatagaattt 44978872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 632973 - 633051
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||| ||||| | ||| |||||| ||||| |||||| |  |||||||||||||||||||||||||||||||||    
T  632973 aaaaaataacacatttaactattaatttgttgattgggtgtaccaatacactcaaatttttgagtgtaccatagaattt 633051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 43916651 - 43916712
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgta 76  Q
    |||||||||||||||||||| |||||||||||| ||| |||||||||||||| ||||| ||||    
T  43916651 aaaacaattctttttcttcg-aaaaaacaactcgttttaatatgaatttgataatttgttgta 43916712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 30547121 - 30547173
Alignment:
Q  66 gatttggtgtatcggtacactcaaatttttgagtgtaccatagaatttaccgg 118  Q
    ||||||||||| ||||||| ||||||||||| |||||||||||||||| ||||    
T  30547121 gatttggtgtaccggtacattcaaatttttgggtgtaccatagaatttgccgg 30547173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 113
Target Start/End: Original strand, 17644899 - 17644954
Alignment:
Q  58 aatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||| ||||||||||||||| ||||||||||| |||||| |||| ||||||||||    
T  17644899 aatttaatgatttggtgtatcagtacactcaaaattttgaatgtatcatagaattt 17644954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 30263907 - 30263986
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaat-ttttgagtgtaccatagaattt 113  Q
    |||||||||||||||| | ||| ||||| | || ||||||||| ||||||||||||| | ||| ||||||||||||||||    
T  30263907 aaaaaacaactcatttaactattaatttaaagaattggtgtatgggtacactcaaatatattgggtgtaccatagaattt 30263986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 113
Target Start/End: Complemental strand, 51369379 - 51369332
Alignment:
Q  66 gatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||  |||||||||||| ||||||||||||||||||||    
T  51369379 gatttggtgtatcaatacactcaaattgttgagtgtaccatagaattt 51369332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 922167 - 922245
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||||||||| | ||| ||||| | ||||||||||| |  |||||||||||| ||| ||||||||||||||||    
T  922167 aaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaattt 922245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 12227202 - 12227124
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||||| |||| | ||| ||||| ||| |||||||||  |||||||||||| | ||| ||||||||||||||||    
T  12227202 aaaaaacaactaatttaattattaatttaatgctttggtgtactggtacactcaaaatgttgggtgtaccatagaattt 12227124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 26011267 - 26011345
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||| ||||| | ||| |||||| ||||| ||||||||  |||||||||||||||| |||||||||| |||||    
T  26011267 aaaaaataacacatttaactattaatttgttgattgggtgtatcaatacactcaaatttttgggtgtaccataaaattt 26011345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 27295139 - 27295061
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||||||||| | ||| ||||| | ||||||||||| |  |||||||||||| ||| ||||||||||||||||    
T  27295139 aaaaaataactcatttaactattaatttaaagatttggtgtaccaatacactcaaattgttgggtgtaccatagaattt 27295061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 50631918 - 50631996
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||| |||||||||| | ||| ||||| | | ||||||||| ||||||||||||||| ||| ||||||||| ||||||    
T  50631918 aaaaatcaactcatttaattattaatttaacgctttggtgtaccggtacactcaaattattgggtgtaccatggaattt 50631996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 51781429 - 51781507
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||||||||| | ||| ||||| | ||||||||||| |  |||||||||||| ||| ||||||||||||||||    
T  51781429 aaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattattgggtgtaccatagaattt 51781507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 51985015 - 51984937
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||||||||| | ||| ||||| | |||||| |||| |  |||||||||||| ||||||||||||||||||||    
T  51985015 aaaaaataactcatttaactattaatttaaggatttgatgtaccaatacactcaaattattgagtgtaccatagaattt 51984937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 48616773 - 48616850
Alignment:
Q  36 aaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||| ||| ||||| | ||| |||||  ||||| |||||| |  |||||||||||||||||||||||||||||||||    
T  48616773 aaaaataacacatttaactattaatttattgattgggtgtaccaatacactcaaatttttgagtgtaccatagaattt 48616850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 7426966 - 7427064
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaattt-ttgagtgtaccatagaatt 112  Q
    |||| |||| |||||||||  |||||||||||||||| | ||| ||||| | ||||||||||| || ||||| ||||||| ||| |||||||||||||||    
T  7426966 aaaataattatttttcttca-aaaaaacaactcattt-attattaattttacgatttggtgtaccgatacacccaaatttattgggtgtaccatagaatt 7427063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 9223160 - 9223259
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaattt-ttgagtgtaccatagaatt 112  Q
    |||| |||| |||||||||  |||||| ||||||||| | ||| ||||| | ||||||||||| || ||||| ||||||| ||| |||||||||||||||    
T  9223160 aaaataattatttttcttcaaaaaaaataactcattt-attattaattttacgatttggtgtaccgatacacccaaatttattgggtgtaccatagaatt 9223258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 12837871 - 12837774
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||| ||||||||||||||  ||||| |||||||||| | ||| | ||| |  | |||||| | || ||||||||||||||| |||||||||||||||||    
T  12837871 aaaataattctttttcttc--aaaaatcaactcatttaattattattttaacaaattggtggaccgatacactcaaattttttagtgtaccatagaattt 12837774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 113
Target Start/End: Complemental strand, 34256532 - 34256456
Alignment:
Q  37 aaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||| ||||| ||| | ||| ||||| || |||||||||| || |||||||||||| ||| ||||||||||||||||    
T  34256532 aaaataactcgtttaattattaatttaataatttggtgtaccgatacactcaaattgttgggtgtaccatagaattt 34256456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 43224951 - 43225049
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaattt-ttgagtgtaccatagaatt 112  Q
    |||| |||| |||||||||  |||||||||||||||| | ||| ||||| |||| |||||||| || ||||| ||||||| ||| |||||||||||||||    
T  43224951 aaaataattatttttcttca-aaaaaacaactcattt-attattaattttatgacttggtgtaccgatacacccaaatttattgggtgtaccatagaatt 43225048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 47209093 - 47209049
Alignment:
Q  69 ttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||    
T  47209093 ttggtgtattgatacactcaaatttttgggtgtaccatagaattt 47209049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 6526753 - 6526832
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaat-ttttgagtgtaccatagaattt 113  Q
    |||||||||||||||| | ||| ||||| | || |  |||||||||||||||||||| | ||| ||||||||||||||||    
T  6526753 aaaaaacaactcatttaactattaatttaaggagtgagtgtatcggtacactcaaatatattgggtgtaccatagaattt 6526832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 18641969 - 18641894
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaa 110  Q
    |||||| ||||||||| | ||| ||||| | ||||| ||||| |  |||||||||||| |||||||||||||||||    
T  18641969 aaaaaataactcatttaactattaatttaaggatttagtgtaccaatacactcaaattgttgagtgtaccatagaa 18641894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 31075935 - 31076014
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaat-ttttgagtgtaccatagaattt 113  Q
    |||||| ||||||||| | ||| ||||| |||| | |||||| |||||||||||||| | ||| ||||||||||||||||    
T  31075935 aaaaaataactcatttaattattaatttaatgaatgggtgtaccggtacactcaaatatattgggtgtaccatagaattt 31076014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 48977201 - 48977280
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaat-ttttgagtgtaccatagaattt 113  Q
    ||||||||||| |||| | ||| ||||| | || | |||||| |||||||||||||| | ||||||||||||||||||||    
T  48977201 aaaaaacaacttatttaactattaatttaaagagtgggtgtaccggtacactcaaatatattgagtgtaccatagaattt 48977280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 14077410 - 14077332
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||||| |||| | ||| ||||| ||| ||||||||| ||||||||||||| | |||  |||||| ||||||||    
T  14077410 aaaaaacaactaatttaattattaatttaatgctttggtgtaccggtacactcaaaatgttggatgtaccgtagaattt 14077332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 16482657 - 16482579
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||||||||| | ||| ||||| | ||||||||||| |  |||||| ||||| ||| ||||||||||||||||    
T  16482657 aaaaaataactcatttaactattaatttaaggatttggtgtaccaatacacttaaattattgggtgtaccatagaattt 16482579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 28493891 - 28493813
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||||||||| | ||| ||||| | ||||||||||| |  |||||| ||||| ||| ||||||||||||||||    
T  28493891 aaaaaataactcatttaactattaatttaaggatttggtgtaacaatacacttaaattattgggtgtaccatagaattt 28493813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 33082037 - 33081991
Alignment:
Q  67 atttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||| ||||||||||||| | ||| ||||||||||||||||    
T  33082037 atttggtgtaccggtacactcaaaatgttgggtgtaccatagaattt 33081991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 33986005 - 33985914
Alignment:
Q  20 attctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||  ||||||||||| |||| | ||| ||||| |  |||||||| | | ||||||||||| |||||| ||||||||| |||||    
T  33986005 attctttttcttc--aaaaaacaactaatttaattattaatttaaatatttggtgcaccagtacactcaaaattttgaatgtaccataaaattt 33985914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 45317985 - 45317943
Alignment:
Q  67 atttggtgtatcggtacactcaaatttttgagtgtaccataga 109  Q
    |||||||||| ||||||| ||||||| ||||||||||||||||    
T  45317985 atttggtgtaccggtacattcaaattattgagtgtaccataga 45317943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 46368595 - 46368517
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||| | ||| ||||| || |||| ||| ||||||||| ||||||| | || ||||||||| |||||    
T  46368595 aaaaaacaactcatttaattattaatttaataatttagtggatcggtacattcaaattatcgaatgtaccataaaattt 46368517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 5360560 - 5360605
Alignment:
Q  68 tttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||| ||||||||||||| | ||| ||||||||||||||||    
T  5360560 tttggtgtaccggtacactcaaaatgttgggtgtaccatagaattt 5360605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 39085072 - 39085117
Alignment:
Q  68 tttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||| ||||||||||||| | |||| |||||||||||||||    
T  39085072 tttggtgtaccggtacactcaaaatgttgaatgtaccatagaattt 39085117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 40868494 - 40868539
Alignment:
Q  68 tttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||| ||||||||||||| | |||| |||||||||||||||    
T  40868494 tttggtgtaccggtacactcaaaatgttgaatgtaccatagaattt 40868539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 41568493 - 41568448
Alignment:
Q  68 tttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||| ||||||||||||| | ||| ||||||||||||||||    
T  41568493 tttggtgtaccggtacactcaaaatattgggtgtaccatagaattt 41568448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 45318176 - 45318096
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaattttt 95  Q
    |||| ||||||||||||||| |||||||||||||| | |  || ||||| |  |||||||||| |||| |||||||||||||    
T  45318176 aaaataattctttttcttcg-aaaaaacaactcatataatcattaatttaacaatttggtgtaccggttcactcaaattttt 45318096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 116
Target Start/End: Complemental strand, 46234873 - 46234828
Alignment:
Q  72 gtgtatcggtacactcaaat-ttttgagtgtaccatagaatttacc 116  Q
    |||||||||||||||||||| | ||| |||||||||||||||||||    
T  46234873 gtgtatcggtacactcaaatatattgggtgtaccatagaatttacc 46234828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 46281990 - 46281945
Alignment:
Q  68 tttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||| ||||||||||||| | ||| ||||||||||||||||    
T  46281990 tttggtgtaccggtacactcaaaatattgggtgtaccatagaattt 46281945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 13216454 - 13216502
Alignment:
Q  68 tttggtgtatcggtacactcaaatttttgagtgtaccatagaatttacc 116  Q
    ||||||||| ||||||||||||| | ||  |||||||||||||||||||    
T  13216454 tttggtgtaccggtacactcaaaatgttaggtgtaccatagaatttacc 13216502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 116
Target Start/End: Complemental strand, 24511668 - 24511588
Alignment:
Q  37 aaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaat-ttttgagtgtaccatagaatttacc 116  Q
    ||||||||||||||   ||| || || | ||||||||||| |||||||||||||| | ||| ||||||| |||||||||||    
T  24511668 aaaacaactcatttacctataaaattaaagatttggtgtaccggtacactcaaatatgttgggtgtaccgtagaatttacc 24511588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 51161204 - 51161164
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgt 75  Q
    |||||||||||| ||||||||| ||||||||||||| ||||    
T  51161204 aaaaaacaactcgtttcaatattaatttgatgatttagtgt 51161164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 10770 - 10672
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  10770 aaaacaattttttttcttcg-aaaaaacaactcgtttcaatatgaatttgatgatttggtgtaccggtacactcaaattttttagtgtaccatagaattt 10672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 1e-34; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 116
Target Start/End: Original strand, 713654 - 713756
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||||||| |||||||||||| ||||||||| |||| |||||||||||||| || |||||| ||||||||||||||||||||||||||    
T  713654 aaaacaattctttttcttcgaaaaaaacaactcgtttcaatataaattagatgatttggtgtaccgatacacttaaatttttgagtgtaccatagaattt 713753  T
Q  114 acc 116  Q
    |||    
T  713754 acc 713756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 15362775 - 15362872
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||||||||| ||  | ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15362775 aaaacaattctttttttt--ttaaaaacaactcgtttcaatatgaatttgatgatttggtgtaccggtacactcaaatttttgagtgtaccatagaattt 15362872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 17809334 - 17809432
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||||||| |||||||||||| ||| ||||||||||| || |||||||||| ||||||||||||||||||||||||||||||||||||    
T  17809334 aaaacaattctttttcttcg-aaaaaacaactcgttttaatatgaatttcataatttggtgtaccggtacactcaaatttttgagtgtaccatagaattt 17809432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 41555730 - 41555828
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||    
T  41555730 aaaacaattttttttcttcg-aaaaaacaactcgtttcaatatgaatttgatgatttggtgtaccgatacacttaaatttttgagtgtaccatagaattt 41555828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 48 - 113
Target Start/End: Complemental strand, 4786430 - 4786365
Alignment:
Q  48 tttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  4786430 tttcaatatgaatttgatgatttggtgtatcggtacacttaaatttttgagtgtaccatagaattt 4786365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 38600116 - 38600214
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||||||| ||||||||| || ||||||||| |||||||||||||||||||   ||||||| ||||||||||||||| ||||||||||    
T  38600116 aaaacaattctttttcttcg-aaaaaacaattcgtttcaatataaatttgatgatttggtgtacgagtacacttaaatttttgagtgtatcatagaattt 38600214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 39089924 - 39090022
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||| |||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||| || |||| |||||    
T  39089924 aaaaaaattatttttcttcg-aaaaaacaactcgtttcaatatgaatttgatgatttggtgtaccggttcactcaaatttttgagtatatcatataattt 39090022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 15334359 - 15334457
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||||||  ||||||||||||  |||||||| |||||||| ||||| |||| ||||||||| |||||||||| ||||||||| |||||    
T  15334359 aaaacaattctttttcttca-aaaaaacaactcgcttcaatattaatttgataatttgatgtaccggtacacttaaatttttgaatgtaccatataattt 15334457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 40288010 - 40288107
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||| ||||||||||||||  |||||||||||||||| |   | ||||| | ||||||||||| ||||||||||||| |||||| ||||||||| |||||    
T  40288010 aaaataattctttttcttc--aaaaaacaactcatttaatggttaatttaacgatttggtgtaccggtacactcaaaattttgaatgtaccataaaattt 40288107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 8362710 - 8362809
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| || |||||||||  |||||||||||| ||| | ||| ||||| || |||||||||| ||||||||||||||| ||| ||||  ||||||||||    
T  8362710 aaaacagttatttttcttcaaaaaaaacaactcgtttaattattaatttaataatttggtgtaccggtacactcaaattgttgggtgtgtcatagaattt 8362809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 22622722 - 22622820
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||| ||||||||   |||||||||||| ||||||||| || || ||||||| ||||| |||| ||||||| || |||||||||||||| |||||    
T  22622722 aaaacaattatttttcttta-aaaaaacaactcgtttcaatattaaattaatgatttagtgtaccggtgcactcaagttcttgagtgtaccataaaattt 22622820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 11088297 - 11088219
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||| ||| | ||| ||||| |  |||||||||| |||||||||||||| |||| ||||||||||||||||    
T  11088297 aaaaaacaactcttttaattattaatttaacaatttggtgtaccggtacactcaaatatttgggtgtaccatagaattt 11088219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 112
Target Start/End: Original strand, 45690856 - 45690902
Alignment:
Q  66 gatttggtgtatcggtacactcaaatttttgagtgtaccatagaatt 112  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||    
T  45690856 gatttggtgtaccggtacactcaaatttttgggtgtaccatagaatt 45690902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 12182642 - 12182561
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaatttacc 116  Q
    ||||| |||||||||| | ||| | ||| || | |||||||||||||||||||||||||||  ||||| |||||||||||||    
T  12182642 aaaaatcaactcatttaattattattttaataaattggtgtatcggtacactcaaatttttaggtgtagcatagaatttacc 12182561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 2859663 - 2859723
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaattttt 95  Q
    |||||||||||||||| | | | ||||||||||||| ||||| ||||||||||||||||||    
T  2859663 aaaaaacaactcatttaattgttaatttgatgattttgtgtaccggtacactcaaattttt 2859723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 12002449 - 12002351
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||  |||||||||  |||||||||||||||| | ||| ||||| |  ||||| | |||||||||| ||||||||||| |||||||||| |||||    
T  12002449 aaaacaataatttttcttca-aaaaaacaactcatttaattattaatttaacaatttgatatatcggtacattcaaatttttgggtgtaccataaaattt 12002351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 37989131 - 37989031
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||| |||||||||||||   |||||| ||||||||| | | | ||||| ||||||||||||| ||||||| ||||||||||    ||||||||||||||    
T  37989131 aaaataattctttttctta--aaaaaaaaactcatttaattgttaatttaatgatttggtgtaccggtacattcaaatttttagacgtaccatagaattt 37989034  T
Q  114 acc 116  Q
    |||    
T  37989033 acc 37989031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 5615456 - 5615378
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||||| |||| | ||  ||||| | |||||| |||| |||||||||||||||||||  |||||||||||||||    
T  5615456 aaaaaacaacttattttattaataatttaacgatttgatgtaccggtacactcaaatttttggatgtaccatagaattt 5615378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 6884240 - 6884162
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||||||||| | ||| ||||| | ||||||||||| |  |||||||||||| ||| ||||||||||||||||    
T  6884240 aaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaattt 6884162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 12547445 - 12547367
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||| ||||| | ||| ||||| |||||||||||||||  |||||||| || |||| ||||||||||||||||    
T  12547445 aaaaaataacacatttaactattaatttaatgatttggtgtatcaatacactcatatctttgggtgtaccatagaattt 12547367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 42641176 - 42641254
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||||| |||| | ||| ||||| | | ||||||| | ||||||||||||| ||||| ||||||||||||||||    
T  42641176 aaaaaacaactaatttaattattaatttaaaggtttggtgcaccggtacactcaaaattttgggtgtaccatagaattt 42641254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 33429181 - 33429136
Alignment:
Q  68 tttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||| ||||||||||||| | ||||||||||||||||||||    
T  33429181 tttggtgtaccggtacactcaaaatgttgagtgtaccatagaattt 33429136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 38073412 - 38073509
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||| |||| |||||||||  ||||||||||| |||| | ||| ||||| | | ||||||| | ||||||||||||| |||||  |||||||||||||||    
T  38073412 aaaataattttttttcttc--aaaaaacaactaatttgattattaatttaaaggtttggtgcaccggtacactcaaaattttggatgtaccatagaattt 38073509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 40533352 - 40533254
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaattt-ttgagtgtaccatagaatt 112  Q
    |||| |||| |||||||||  |||||||||||||||| | ||| ||||| | ||||||||||| || ||||| ||||||| ||| |||||||||||||||    
T  40533352 aaaataattatttttcttca-aaaaaacaactcattt-attattaattttacgatttggtgtaccgatacacccaaatttattgggtgtaccatagaatt 40533255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 40810520 - 40810452
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggta 82  Q
    ||||| |||||||||||||  |||||| || || ||||||||||||||| || |||||||||| |||||    
T  40810520 aaaacgattctttttcttcaaaaaaaataattcgtttcaatatgaatttaataatttggtgtaccggta 40810452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 11598196 - 11598117
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaattttt-gagtgtaccatagaattt 113  Q
    |||||| ||| ||||| | ||| |||||| ||||| |||||| |  ||||||||||||||| ||||||||||||||||||    
T  11598196 aaaaaataacacatttaactattaatttgttgattgggtgtaccaatacactcaaattttttgagtgtaccatagaattt 11598117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 15426335 - 15426405
Alignment:
Q  21 ttctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatt 92  Q
    ||||||||||||  |||||||||||| ||| | ||| ||||| || |||||||||| |||||||||||||||    
T  15426335 ttctttttcttca-aaaaaacaactcgtttaattattaatttaataatttggtgtaccggtacactcaaatt 15426405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 34091777 - 34091698
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaat-ttttgagtgtaccatagaattt 113  Q
    |||||||||||||||| | ||| ||||| | || | ||||||||||||||||||||| | |||| ||||||||| |||||    
T  34091777 aaaaaacaactcatttaactattaatttaaagagtgggtgtatcggtacactcaaatatattgaatgtaccatataattt 34091698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 113
Target Start/End: Complemental strand, 42046125 - 42046078
Alignment:
Q  66 gatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||||| |  |||||||||||| ||||||||||||||||||||    
T  42046125 gatttggtgtaccaatacactcaaattgttgagtgtaccatagaattt 42046078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 8334197 - 8334275
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||| | ||  ||||| |  |||||||||||||||||| |||||| |||  |||||||||| |||||    
T  8334197 aaaaaacaactcatttgattaataatttaacaatttggtgtatcggtacaatcaaatatttaggtgtaccataaaattt 8334275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 11813522 - 11813600
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||| ||||| | ||| ||||| | ||||||||||| |  |||||||||||| ||| ||||||||||||||||    
T  11813522 aaaaaataacacatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaattt 11813600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 15206052 - 15206140
Alignment:
Q  20 attctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgag-tgtaccatagaattt 113  Q
    |||||||||||||  ||||||||||||||||    || ||||| | ||||||||||| | |||||||||||||||| || |||| ||||||||||    
T  15206052 attctttttcttc--aaaaaacaactcattt----attaatttaacgatttggtgtaccagtacactcaaattttttagatgtatcatagaattt 15206140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 116
Target Start/End: Original strand, 19268923 - 19268973
Alignment:
Q  66 gatttggtgtatcggtacactcaaatttttgagtgtaccatagaatttacc 116  Q
    ||||||||||| ||||||||||| ||||||  ||||||||| |||||||||    
T  19268923 gatttggtgtaccggtacactcagatttttaggtgtaccatcgaatttacc 19268973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 20212479 - 20212556
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||| ||||| | ||| |||||| ||||| |||||| |  |||||| ||||||||||||||||||||||||||    
T  20212479 aaaaaataacacatttaactattaatttgttgatt-ggtgtaccaatacacttaaatttttgagtgtaccatagaattt 20212556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 25332956 - 25333034
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||| | ||| ||||| || ||||||||||  ||| |||| ||||| ||| |||||||||| |||||    
T  25332956 aaaaaacaactcatttaattattaatttaataatttggtgtactggtccacttaaattgttgggtgtaccataaaattt 25333034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 34665652 - 34665574
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||||||||| | ||| ||||| | ||||||||||| |  |||||||||||| ||| || |||||||||||||    
T  34665652 aaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtataccatagaattt 34665574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 37782174 - 37782252
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||| |||||||||| | ||| ||||| | | ||||||||| ||| |||||||||||||||  |||| ||||||||||    
T  37782174 aaaaatcaactcatttaattattaatttaacgttttggtgtaccggcacactcaaatttttggatgtaacatagaattt 37782252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 37909460 - 37909382
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||| ||||| | ||| |||||| ||||| ||||||    ||||||||||||||||||||||| |||||||||    
T  37909460 aaaaaataacacatttaactattaatttgttgattgggtgtactaatacactcaaatttttgagtgtactatagaattt 37909382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 16718684 - 16718639
Alignment:
Q  68 tttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||| ||||||||||||| | |||| |||||||||||||||    
T  16718684 tttggtgtaccggtacactcaaaatattgaatgtaccatagaattt 16718639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 113
Target Start/End: Complemental strand, 7467155 - 7467123
Alignment:
Q  81 tacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||| ||||||||||||||||    
T  7467155 tacactcaaatttttgggtgtaccatagaattt 7467123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 19636000 - 19636036
Alignment:
Q  74 gtatcggtacactcaaatttttgagtgtaccatagaa 110  Q
    ||||||||||||||||| || ||||||||||||||||    
T  19636000 gtatcggtacactcaaaattgtgagtgtaccatagaa 19636036  T

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Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 19834593 - 19834629
Alignment:
Q  74 gtatcggtacactcaaatttttgagtgtaccatagaa 110  Q
    ||||||||||||||||| || ||||||||||||||||    
T  19834593 gtatcggtacactcaaaattgtgagtgtaccatagaa 19834629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 113
Target Start/End: Complemental strand, 32499201 - 32499153
Alignment:
Q  65 tgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||||||||  |||||||||||| ||  ||||||||||||||||    
T  32499201 tgatttggtgtatcaatacactcaaattctttggtgtaccatagaattt 32499153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 36428865 - 36428913
Alignment:
Q  68 tttggtgtatcggtacactcaaatttttgagtgtaccatagaatttacc 116  Q
    ||||||||| ||||||||||||| | |||  ||||||||||||||||||    
T  36428865 tttggtgtaccggtacactcaaaatgttggatgtaccatagaatttacc 36428913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 37725652 - 37725554
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaattt-ttgagtgtaccatagaatt 112  Q
    |||| |||| |||||||||  |||||||||||||||| | ||| ||||| | || |||||||| || ||||| ||||||| ||| |||||||||||||||    
T  37725652 aaaataattatttttcttca-aaaaaacaactcattt-attattaattttacgacttggtgtaccgatacacccaaatttattgggtgtaccatagaatt 37725555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1844 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold1844
Description:

Target: scaffold1844; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 1216 - 1119
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||||||||||||||  ||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  1216 aaaacaattctttttcttcg--aaaaacaacccgtttcaatatgaatttgatgatttggtgtaccggtacactcaaatttttaagtgtaccatagaattt 1119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 7e-33; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 7885978 - 7885880
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||| ||||||||||| |||||||| |||||||||||||||    
T  7885978 aaaacaattctttttcttcg-aaaaaacaactcgtttcaatatgaatttgatgatttgatgtaccggtacactcagatttttgaatgtaccatagaattt 7885880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 31893638 - 31893736
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||||||  ||| |||||||| ||||||||| |||||||| |||||||||| ||||||||| ||||||||||||||||| ||||||||    
T  31893638 aaaacaattctttttcttca-aaagaacaactcgtttcaatattaatttgataatttggtgtaccggtacacttaaatttttgagtgtaccgtagaattt 31893736  T

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Target: chr8; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 29107859 - 29107956
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||   |||||||||||||||||||| ||  |||||||||    
T  29107859 aaaacaattctttt-cttcg-aaaaaacaactcgtttcaatatgaatttgatgatttggtgtacaagtacactcaaatttttgagtatataatagaattt 29107956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 105
Target Start/End: Original strand, 44578960 - 44579050
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtacca 105  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| || || | |||||||||| | |||||||    
T  44578960 aaaacaattctttttcttcg-aaaaaacaactcgtttcaatatgaatttgatgatttggtgtaccgatatattcaaattttttaatgtacca 44579050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 26 - 113
Target Start/End: Original strand, 41899 - 41986
Alignment:
Q  26 tttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||  |||||||||||||||| | ||  ||||| |  ||||||||||||||||||||||||| |||||||||||||||||||||    
T  41899 tttcttcaaaaaaaacaactcatttgattaataatttaacaatttggtgtatcggtacactcaaatatttgagtgtaccatagaattt 41986  T

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Target: chr8; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 34047721 - 34047820
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||||||||||||  |||||||||||| ||| |  || ||||| || |||||||||| ||||||||||||||| ||| ||||||||||||||||    
T  34047721 aaaacagttctttttcttcaaaaaaaacaactcgtttaatcattaatttaataatttggtgtaccggtacactcaaattgttgggtgtaccatagaattt 34047820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 32887983 - 32888061
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||| | ||  ||||| |  ||||||||||||||||||||||||| |||||||||||||||||||||    
T  32887983 aaaaaacaactcatttgattaataatttaacaatttggtgtatcggtacactcaaatatttgagtgtaccatagaattt 32888061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 113
Target Start/End: Original strand, 9509164 - 9509251
Alignment:
Q  26 tttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||  |||||||||||||||| | ||  ||||| |  |||| |||||||||||||||||||| ||||| |||||||||||||||    
T  9509164 tttcttcaaaaaaaacaactcatttgattaataatttaacaatttagtgtatcggtacactcaaatatttgaatgtaccatagaattt 9509251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 66 - 113
Target Start/End: Complemental strand, 12801157 - 12801110
Alignment:
Q  66 gatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  12801157 gatttggtgtaccggtacactcaaatttttgggtgtaccatagaattt 12801110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 42 - 101
Target Start/End: Original strand, 15259318 - 15259377
Alignment:
Q  42 aactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgt 101  Q
    ||||| ||||||||| ||||||||||| ||||||| |||||||||| |||||||||||||    
T  15259318 aactcgtttcaatattaatttgatgatatggtgtaccggtacactcgaatttttgagtgt 15259377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 27970113 - 27970015
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||| |||||||||  |||||||||||| ||| | ||| ||| | || |||||||| | ||||||||||||||| ||| ||||||||||||||||    
T  27970113 aaaacaattatttttcttca-aaaaaacaactcgtttaactattaatataataatttggtgcaccggtacactcaaattgttgggtgtaccatagaattt 27970015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 35754762 - 35754860
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||||||||||||  |||||||||||||||| | ||| ||||| || ||||| ||||||||||||  |||||| ||| || |||||||||||||    
T  35754762 aaaacagttctttttcttca-aaaaaacaactcatttaattattaatttaataatttgatgtatcggtacatgcaaattgttgggtataccatagaattt 35754860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 17838661 - 17838739
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||| || || ||||| || |||||||||| | |||||||||||| ||||||  |||||||||||||    
T  17838661 aaaaaacaactcatttaaaaattaatttaattatttggtgtacccgtacactcaaatatttgagcataccatagaattt 17838739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 23870585 - 23870663
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||| | ||  ||||| |  |||| |||||||||||||||||||| ||||||||||||||| |||||    
T  23870585 aaaaaacaactcatttgattaataatttaacaatttagtgtatcggtacactcaaatatttgagtgtaccataaaattt 23870663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 39722072 - 39721973
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||| |||| ||||||||   ||||||||| |||||| ||||| ||||| || || || ||||  | ||||||||||| |||||||||||||||||||||    
T  39722072 aaaataattttttttcttaaaaaaaaacaattcatttaaatattaatttaattatctgatgtacggatacactcaaatatttgagtgtaccatagaattt 39721973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 2880287 - 2880332
Alignment:
Q  68 tttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||| ||||||||||||| | ||||||||||||||||||||    
T  2880287 tttggtgtaccggtacactcaaaatgttgagtgtaccatagaattt 2880332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 113
Target Start/End: Original strand, 30777588 - 30777677
Alignment:
Q  24 tttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||  ||||||||||| |||| | ||| ||||| |   ||||||||| ||||||||||||| | |||| |||||||||||||||    
T  30777588 tttttcttccaaaaaaacaactaatttaattattaatttaaaattttggtgtaccggtacactcaaaatgttgaatgtaccatagaattt 30777677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 41674532 - 41674487
Alignment:
Q  68 tttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||| ||||||||||||| | ||||||||||||||||||||    
T  41674532 tttggtgtaccggtacactcaaaatgttgagtgtaccatagaattt 41674487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 9712714 - 9712785
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacact 86  Q
    ||||||||||||||||||   || ||||||||| ||||||||| |||||||||||||| | || |||||||||    
T  9712714 aaaacaattctttttcttaa-aacaaacaactcgtttcaatattaatttgatgatttgatataccggtacact 9712785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 107
Target Start/End: Complemental strand, 41423399 - 41423359
Alignment:
Q  67 atttggtgtatcggtacactcaaatttttgagtgtaccata 107  Q
    ||||||||||||||||||||||||| |||| ||||||||||    
T  41423399 atttggtgtatcggtacactcaaatatttgggtgtaccata 41423359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 2261111 - 2261032
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaat-ttttgagtgtaccatagaattt 113  Q
    ||||||||||| |||| | ||| ||||| | || | |||||| |||||||||||||| | ||||||||||||||||||||    
T  2261111 aaaaaacaacttatttaattattaatttaaagagtgggtgtaccggtacactcaaatatattgagtgtaccatagaattt 2261032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 5215645 - 5215724
Alignment:
Q  34 taaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||| |||| | ||| ||||| ||| ||| ||||| || |||||||||| | |||||||||||||| |||||    
T  5215645 taaaaaacaactaatttaattattaatttaatgtttttgtgtaccgatacactcaaaatattgagtgtaccataaaattt 5215724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 6800096 - 6800175
Alignment:
Q  34 taaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||| ||| ||||| | ||| ||||  ||||||||||||| |  ||||||||||| ||||||||||||||| |||||    
T  6800096 taaaaaaaaacacatttaactattaattcaatgatttggtgtaccaatacactcaaatctttgagtgtaccataaaattt 6800175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 14498628 - 14498703
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaa 110  Q
    |||||| ||||||||| | ||| ||||| | ||||||||||| |  |||||||||||| ||| |||||||||||||    
T  14498628 aaaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaa 14498703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 40267559 - 40267480
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaat-ttttgagtgtaccatagaattt 113  Q
    |||||||||||||||| | ||||||||| | || | |||||| |||||||||||||| |  || ||||||||||||||||    
T  40267559 aaaaaacaactcatttaactatgaatttaaagagtgggtgtaccggtacactcaaatatagtgggtgtaccatagaattt 40267480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 417728 - 417682
Alignment:
Q  67 atttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||||  |||||||||||| | ||||||||||||||||||||    
T  417728 atttggtgtactggtacactcaaaatattgagtgtaccatagaattt 417682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 2273091 - 2273013
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||| ||||| | ||| ||||| ||||||||||||| |  |||||||| || |||| ||||||||||||||||    
T  2273091 aaaaaataacacatttaactattaatttaatgatttggtgtaccaatacactcatatctttgggtgtaccatagaattt 2273013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 12633231 - 12633309
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||||| | || | ||| ||||| ||| |||||||||  |||||||||||| | ||| ||||||||||||||||    
T  12633231 aaaaaacaactaacttaattattaatttaatgctttggtgtaatggtacactcaaaatgttgggtgtaccatagaattt 12633309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 28090273 - 28090195
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||||||||| | ||| ||||| | ||||||||||| |  || ||||||||| ||| ||||||||||||||||    
T  28090273 aaaaaataactcatttaactattaatttaaggatttggtgtaccaatatactcaaattattgggtgtaccatagaattt 28090195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 29773526 - 29773448
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| || |||||| | ||| ||||| | ||||||||||| |  |||||||||||| ||| ||||||||||||||||    
T  29773526 aaaaaataaatcatttaactattaatttaaggatttggtgtaccaatacactcaaattgttgggtgtaccatagaattt 29773448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 37511169 - 37511091
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||||||||| | ||| ||||| | ||||||||||| |  |||||||||||| ||| ||||||||| ||||||    
T  37511169 aaaaaataactcatttaactattaatttaaagatttggtgtaccaatacactcaaattgttgggtgtaccatcgaattt 37511091  T

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Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 41720329 - 41720247
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaat-ttttgagtgtaccatagaatttacc 116  Q
    |||||||||||||||| | ||||||||| | || | |||||| || ||||||||||| |  || |||||||||||||||||||    
T  41720329 aaaaaacaactcatttaactatgaatttaaagagtgggtgtaccgatacactcaaatatagtgggtgtaccatagaatttacc 41720247  T

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Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 464141 - 464218
Alignment:
Q  36 aaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||||||||| |  || |||||  |||| | ||||| |||||||||||||||||| | ||||||||| |||||    
T  464141 aaaaacaactcatttaatgattaatttactgatgtagtgtaccggtacactcaaatttttaaatgtaccatataattt 464218  T

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Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 43331792 - 43331747
Alignment:
Q  68 tttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||| ||||||||||||| | ||| ||||||||||||||||    
T  43331792 tttggtgtaccggtacactcaaaatgttgggtgtaccatagaattt 43331747  T

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Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 44309614 - 44309569
Alignment:
Q  68 tttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||| ||||||||||||| | ||| ||||||||||||||||    
T  44309614 tttggtgtaccggtacactcaaaatgttgggtgtaccatagaattt 44309569  T

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Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 117892 - 117812
Alignment:
Q  34 taaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaat-ttttgagtgtaccatagaattt 113  Q
    ||||||||||||||||| | ||||||||| | || |  ||||| |||||||||||||| |  || ||||||||||||||||    
T  117892 taaaaaacaactcatttaactatgaatttaaagagtgagtgtaccggtacactcaaatatagtgggtgtaccatagaattt 117812  T

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Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 91
Target Start/End: Complemental strand, 27847591 - 27847535
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaat 91  Q
    |||||||||||||||| | ||||||||| | || |  ||||||||||||||||||||    
T  27847591 aaaaaacaactcatttaactatgaatttaaagagtgagtgtatcggtacactcaaat 27847535  T

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Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 28897209 - 28897307
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaattt-ttgagtgtaccatagaatt 112  Q
    |||| |||| |||||||||  |||||||||||||||| | ||| ||||| |||| |||||||| |  ||||| ||||||| ||| |||||||||||||||    
T  28897209 aaaataattatttttcttca-aaaaaacaactcattt-attattaattttatgacttggtgtaccaatacacccaaatttattgggtgtaccatagaatt 28897306  T

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Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 29039655 - 29039619
Alignment:
Q  74 gtatcggtacactcaaatttttgagtgtaccatagaa 110  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  29039655 gtatcggtacactaaaatttctgagtgtaccatagaa 29039619  T

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Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 40972423 - 40972467
Alignment:
Q  68 tttggtgtatcggtacactcaaatttttgagtgtaccatagaatt 112  Q
    ||||||||| ||||||||||||| | |||| ||||||||||||||    
T  40972423 tttggtgtaccggtacactcaaaatattgaatgtaccatagaatt 40972467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 110
Target Start/End: Complemental strand, 43460422 - 43460382
Alignment:
Q  71 ggtgtatcggtacactcaaattttt-gagtgtaccatagaa 110  Q
    |||||| |||||||||||||||||| |||||||||||||||    
T  43460422 ggtgtagcggtacactcaaatttttcgagtgtaccatagaa 43460382  T

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Target: scaffold0009 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 214240 - 214143
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||||||| ||||||||||  ||||| ||||| ||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||    
T  214240 aaaacaattttttttcttcg--aaaaataactcgtttcaatatgaatttgatgattttgtgtaccagtacactcaaatttttgagtgtaccatagaattt 214143  T

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Target: scaffold0072 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 47900 - 47978
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||| | | ||||||| | ||||||||||| |||||||||||||||||| |||||||||||||||||    
T  47900 aaaaaacaactcatttaattgtgaatttaacgatttggtgtaccggtacactcaaatttttaagtgtaccatagaattt 47978  T

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Target: scaffold0045 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 38082 - 38003
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaattt 93  Q
    |||||||||| ||||||||  |||||||||| | ||||||||| ||||||||||||||||||| || |||||||||||||    
T  38082 aaaacaattcgttttcttctaaaaaaacaacccgtttcaatataaatttgatgatttggtgtaccgatacactcaaattt 38003  T

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Target: scaffold0005 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 36934 - 37012
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||||||||| | ||| ||||| | |||||||||||||  |||||||||||| ||||||||||||||||||||    
T  36934 aaaaaataactcatttaactattaatttaaggatttggtgtatcaatacactcaaattgttgagtgtaccatagaattt 37012  T

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Target: scaffold0005; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 116
Target Start/End: Original strand, 271448 - 271548
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||| ||||||||||| ||  ||||||||||| |||| |  || ||||| | || |||||||| ||||||| |||||||||| | | |||||||||||||    
T  271448 aaaataattctttttcctc--aaaaaacaacttatttaataattaatttaacgacttggtgtagcggtacattcaaattttttaatataccatagaattt 271545  T
Q  114 acc 116  Q
    |||    
T  271546 acc 271548  T

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Target: scaffold0721 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0721
Description:

Target: scaffold0721; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 42 - 113
Target Start/End: Original strand, 6920 - 6991
Alignment:
Q  42 aactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    ||||| ||||||||| || || ||||||||||||| |||| |||||||||| |||| |||||||||||||||    
T  6920 aactcgtttcaatattaaattaatgatttggtgtaccggtgcactcaaattcttgaatgtaccatagaattt 6991  T

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Target: scaffold0604 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 113
Target Start/End: Complemental strand, 2078 - 2023
Alignment:
Q  58 aatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||| ||||| |||||| |  |||||||||||||||||||||||||||||||||    
T  2078 aatttgttgattgggtgtaccaatacactcaaatttttgagtgtaccatagaattt 2023  T

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Target: scaffold0067 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 68 - 114
Target Start/End: Complemental strand, 41436 - 41390
Alignment:
Q  68 tttggtgtatcggtacactcaaatttttgagtgtaccatagaattta 114  Q
    ||||||||| ||||||||||||| | |||||||||||||||||||||    
T  41436 tttggtgtaccggtacactcaaaatgttgagtgtaccatagaattta 41390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 113
Target Start/End: Complemental strand, 404720 - 404688
Alignment:
Q  81 tacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||||||||||||||||||||||||    
T  404720 tacactcaaatttttgagtgtaccatagaattt 404688  T

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Target: scaffold0060 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 45843 - 45764
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaat-ttttgagtgtaccatagaattt 113  Q
    ||||||||||||| || | ||| ||||| | |||||| ||||||| ||||||||||| |||||  |||||||||||||||    
T  45843 aaaaaacaactcacttaactattaatttaaagatttgatgtatcgatacactcaaatattttggatgtaccatagaattt 45764  T

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Target: scaffold0113 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 29326 - 29245
Alignment:
Q  35 aaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaatttttgagtgtaccatagaatttacc 116  Q
    |||||| ||| ||||| | ||| |||||| ||||| |||||| |  |||||||||||||||| |||||||||  ||||||||    
T  29326 aaaaaataacacatttaactattaatttgttgattgggtgtaccaatacactcaaatttttgggtgtaccattaaatttacc 29245  T

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Target: scaffold0625 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0625
Description:

Target: scaffold0625; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 113
Target Start/End: Original strand, 6618 - 6666
Alignment:
Q  65 tgatttggtgtatcggtacactcaaatttttgagtgtaccatagaattt 113  Q
    |||||||||||| |  |||||||||||||||  ||||||||||||||||    
T  6618 tgatttggtgtaccaatacactcaaattttttggtgtaccatagaattt 6666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 166723 - 166821
Alignment:
Q  14 aaaacaattctttttcttcgtaaaaaacaactcatttcaatatgaatttgatgatttggtgtatcggtacactcaaattt-ttgagtgtaccatagaatt 112  Q
    |||| |||| |||||||||  |||||||||||||||| | ||| ||||| | || |||||||| || ||||| ||||||| |||| ||||||||||||||    
T  166723 aaaataattatttttcttca-aaaaaacaactcattt-attattaattttacgacttggtgtaccgatacacccaaatttattgaatgtaccatagaatt 166820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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